Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:44:39 (43550): wrapper (7.7.26015): starting
14:44:39 (43550): wrapper: running run_atlas (--nthreads 4)
[2026-04-11 14:44:39] Arguments: --nthreads 4
[2026-04-11 14:44:39] Threads: 4
[2026-04-11 14:44:39] Checking for CVMFS
[2026-04-11 14:44:39] No cvmfs_config command found, will try listing directly
[2026-04-11 14:44:39] CVMFS is ok
[2026-04-11 14:44:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-11 14:44:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-11 14:44:39] Further information can be found at the LHC@home message board.
[2026-04-11 14:44:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 14:44:39] Checking for apptainer binary...
[2026-04-11 14:44:39] which: no apptainer in ((null))
[2026-04-11 14:44:39] apptainer is not installed, using version from CVMFS
[2026-04-11 14:44:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 14:44:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot88/slots/22/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-04-11 14:44:40] apptainer works
[2026-04-11 14:44:40] Set ATHENA_PROC_NUMBER=4
[2026-04-11 14:44:40] Set ATHENA_CORE_NUMBER=4
[2026-04-11 14:44:40] Starting ATLAS job with PandaID=7083279344
[2026-04-11 14:44:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot88/slots/22 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 17:33:26]  *** The last 200 lines of the pilot log: ***
[2026-04-11 17:33:26] 2026-04-11 15:32:24,872 | INFO     | job 7083279344 has state=finished
[2026-04-11 17:33:26] 2026-04-11 15:32:24,873 | INFO     | preparing for final server update for job 7083279344 in state='finished'
[2026-04-11 17:33:26] 2026-04-11 15:32:24,873 | INFO     | reading metadata from: /var/lib/boinc/var/slot88/slots/22/PanDA_Pilot-7083279344/jobReport.json
[2026-04-11 17:33:26] 2026-04-11 15:32:24,876 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot88/slots/22/workernode_map.json
[2026-04-11 17:33:26] 2026-04-11 15:32:24,876 | INFO     | this job has now completed (state=finished)
[2026-04-11 17:33:26] 2026-04-11 15:32:24,876 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-11 17:33:26] 2026-04-11 15:32:24,876 | INFO     | log transfer has been attempted: DONE
[2026-04-11 17:33:26] 2026-04-11 15:32:24,876 | INFO     | job 7083279344 has finished - writing final server update
[2026-04-11 17:33:26] 2026-04-11 15:32:24,877 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3404585/.job.ad'
[2026-04-11 17:33:26] 2026-04-11 15:32:24,877 | INFO     | total number of processed events: 400 (read)
[2026-04-11 17:33:26] 2026-04-11 15:32:24,902 | INFO     | using path: /var/lib/boinc/var/slot88/slots/22/PanDA_Pilot-7083279344/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 17:33:26] 2026-04-11 15:32:24,903 | INFO     | extracted standard info from prmon json
[2026-04-11 17:33:26] 2026-04-11 15:32:24,903 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 17:33:26] 2026-04-11 15:32:24,903 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 17:33:26] 2026-04-11 15:32:24,903 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 17:33:26] 2026-04-11 15:32:24,907 | INFO     | fitting pss+swap vs Time
[2026-04-11 17:33:26] 2026-04-11 15:32:24,907 | INFO     | sum of square deviations: 1367709365.0
[2026-04-11 17:33:26] 2026-04-11 15:32:24,908 | INFO     | sum of deviations: 20122048467.000004
[2026-04-11 17:33:26] 2026-04-11 15:32:24,908 | INFO     | mean x (centered): 0.0
[2026-04-11 17:33:26] 2026-04-11 15:32:24,909 | INFO     | mean y: 2312283.6707317075
[2026-04-11 17:33:26] 2026-04-11 15:32:24,909 | INFO     | intersect: 2312283.6707317075
[2026-04-11 17:33:26] 2026-04-11 15:32:24,909 | INFO     | chi2: 1.376860696347128
[2026-04-11 17:33:26] 2026-04-11 15:32:24,909 | INFO     | sum of square deviations: 1246386160.0
[2026-04-11 17:33:26] 2026-04-11 15:32:24,910 | INFO     | sum of deviations: 19412378127.0
[2026-04-11 17:33:26] 2026-04-11 15:32:24,910 | INFO     | mean x (centered): 0.0
[2026-04-11 17:33:26] 2026-04-11 15:32:24,911 | INFO     | mean y: 2311391.4402515725
[2026-04-11 17:33:26] 2026-04-11 15:32:24,911 | INFO     | intersect: 2311391.4402515725
[2026-04-11 17:33:26] 2026-04-11 15:32:24,911 | INFO     | chi2: 1.378074586974802
[2026-04-11 17:33:26] 2026-04-11 15:32:24,911 | INFO     | current chi2=1.378074586974802 (change=-0.08816364871874613 %)
[2026-04-11 17:33:26] 2026-04-11 15:32:24,911 | INFO     | right removable region: 158
[2026-04-11 17:33:26] 2026-04-11 15:32:24,911 | INFO     | sum of square deviations: 1246386160.0
[2026-04-11 17:33:26] 2026-04-11 15:32:24,912 | INFO     | sum of deviations: -1365168959.0
[2026-04-11 17:33:26] 2026-04-11 15:32:24,912 | INFO     | mean x (centered): 0.0
[2026-04-11 17:33:26] 2026-04-11 15:32:24,913 | INFO     | mean y: 2338877.647798742
[2026-04-11 17:33:26] 2026-04-11 15:32:24,913 | INFO     | intersect: 2338877.647798742
[2026-04-11 17:33:26] 2026-04-11 15:32:24,913 | INFO     | chi2: 0.004851223489551044
[2026-04-11 17:33:26] 2026-04-11 15:32:24,913 | INFO     | current chi2=0.004851223489551044 (change=99.64766054384285 %)
[2026-04-11 17:33:26] 2026-04-11 15:32:24,913 | INFO     | sum of square deviations: 1132458442.5
[2026-04-11 17:33:26] 2026-04-11 15:32:24,914 | INFO     | sum of deviations: -1250716153.5
[2026-04-11 17:33:26] 2026-04-11 15:32:24,914 | INFO     | mean x (centered): 0.0
[2026-04-11 17:33:26] 2026-04-11 15:32:24,914 | INFO     | mean y: 2338719.824675325
[2026-04-11 17:33:26] 2026-04-11 15:32:24,915 | INFO     | intersect: 2338719.824675325
[2026-04-11 17:33:26] 2026-04-11 15:32:24,915 | INFO     | chi2: 0.004790244314410805
[2026-04-11 17:33:26] 2026-04-11 15:32:24,915 | INFO     | current chi2=0.004790244314410805 (change=1.2569854856528677 %)
[2026-04-11 17:33:26] 2026-04-11 15:32:24,915 | INFO     | left removable region: 10
[2026-04-11 17:33:26] 2026-04-11 15:32:24,915 | INFO     | sum of square deviations: 1005179777.0
[2026-04-11 17:33:26] 2026-04-11 15:32:24,916 | INFO     | sum of deviations: -1305872536.499999
[2026-04-11 17:33:26] 2026-04-11 15:32:24,916 | INFO     | mean x (centered): 0.0
[2026-04-11 17:33:26] 2026-04-11 15:32:24,916 | INFO     | mean y: 2338640.5472972975
[2026-04-11 17:33:26] 2026-04-11 15:32:24,916 | INFO     | intersect: 2338640.5472972975
[2026-04-11 17:33:26] 2026-04-11 15:32:24,917 | INFO     | chi2: 0.004727475140878643
[2026-04-11 17:33:26] 2026-04-11 15:32:24,917 | INFO     | current memory leak: -1.30 B/s (using 148 data points, chi2=0.00)
[2026-04-11 17:33:26] 2026-04-11 15:32:24,917 | INFO     | could have reported an average CPU frequency of 2689 MHz (9 samples)
[2026-04-11 17:33:26] 2026-04-11 15:32:24,917 | INFO     | ..............................
[2026-04-11 17:33:26] 2026-04-11 15:32:24,918 | INFO     | . Timing measurements:
[2026-04-11 17:33:26] 2026-04-11 15:32:24,918 | INFO     | . get job = 0 s
[2026-04-11 17:33:26] 2026-04-11 15:32:24,918 | INFO     | . initial setup = 8 s
[2026-04-11 17:33:26] 2026-04-11 15:32:24,918 | INFO     | . payload setup = 15 s
[2026-04-11 17:33:26] 2026-04-11 15:32:24,918 | INFO     | . stage-in = 0 s
[2026-04-11 17:33:26] 2026-04-11 15:32:24,918 | INFO     | . payload execution = 10005 s
[2026-04-11 17:33:26] 2026-04-11 15:32:24,918 | INFO     | . stage-out = 0 s
[2026-04-11 17:33:26] 2026-04-11 15:32:24,918 | INFO     | . log creation = 0 s
[2026-04-11 17:33:26] 2026-04-11 15:32:24,918 | INFO     | ..............................
[2026-04-11 17:33:26] 2026-04-11 15:32:25,020 | INFO     | 
[2026-04-11 17:33:26] 2026-04-11 15:32:25,021 | INFO     | job summary report
[2026-04-11 17:33:26] 2026-04-11 15:32:25,021 | INFO     | --------------------------------------------------
[2026-04-11 17:33:26] 2026-04-11 15:32:25,021 | INFO     | PanDA job id: 7083279344
[2026-04-11 17:33:26] 2026-04-11 15:32:25,021 | INFO     | task id: 49263208
[2026-04-11 17:33:26] 2026-04-11 15:32:25,021 | INFO     | errors: (none)
[2026-04-11 17:33:26] 2026-04-11 15:32:25,021 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 17:33:26] 2026-04-11 15:32:25,021 | INFO     | pilot state: finished 
[2026-04-11 17:33:26] 2026-04-11 15:32:25,022 | INFO     | transexitcode: 0
[2026-04-11 17:33:26] 2026-04-11 15:32:25,022 | INFO     | exeerrorcode: 0
[2026-04-11 17:33:26] 2026-04-11 15:32:25,022 | INFO     | exeerrordiag: 
[2026-04-11 17:33:26] 2026-04-11 15:32:25,022 | INFO     | exitcode: 0
[2026-04-11 17:33:26] 2026-04-11 15:32:25,022 | INFO     | exitmsg: OK
[2026-04-11 17:33:26] 2026-04-11 15:32:25,022 | INFO     | cpuconsumptiontime: 38160 s
[2026-04-11 17:33:26] 2026-04-11 15:32:25,022 | INFO     | nevents: 400
[2026-04-11 17:33:26] 2026-04-11 15:32:25,022 | INFO     | neventsw: 0
[2026-04-11 17:33:26] 2026-04-11 15:32:25,022 | INFO     | pid: 53702
[2026-04-11 17:33:26] 2026-04-11 15:32:25,022 | INFO     | pgrp: 53702
[2026-04-11 17:33:26] 2026-04-11 15:32:25,022 | INFO     | corecount: 4
[2026-04-11 17:33:26] 2026-04-11 15:32:25,022 | INFO     | event service: False
[2026-04-11 17:33:26] 2026-04-11 15:32:25,022 | INFO     | sizes: {0: 2281480, 11: 2281480, 10024: 2310634, 10025: 2319656, 10028: 2319712, 10029: 2319970}
[2026-04-11 17:33:26] 2026-04-11 15:32:25,023 | INFO     | --------------------------------------------------
[2026-04-11 17:33:26] 2026-04-11 15:32:25,023 | INFO     | 
[2026-04-11 17:33:26] 2026-04-11 15:32:25,023 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot88/slots/22
[2026-04-11 17:33:26] 2026-04-11 15:32:25,060 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,061 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,061 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,061 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,061 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,061 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,061 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,061 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,061 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,061 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,061 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,061 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,062 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,062 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,062 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,062 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,062 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,062 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 17:33:26] 2026-04-11 15:32:25,062 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,062 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 17:33:26] 2026-04-11 15:32:25,062 | INFO     | job 7083279344 has completed (purged errors)
[2026-04-11 17:33:26] 2026-04-11 15:32:25,063 | INFO     | overall cleanup function is called
[2026-04-11 17:33:26] 2026-04-11 15:32:26,071 | INFO     | --- collectZombieJob: --- 10, [53702]
[2026-04-11 17:33:26] 2026-04-11 15:32:26,071 | INFO     | zombie collector waiting for pid 53702
[2026-04-11 17:33:26] 2026-04-11 15:32:26,072 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 17:33:26] 2026-04-11 15:32:26,072 | INFO     | collected zombie processes
[2026-04-11 17:33:26] 2026-04-11 15:32:26,072 | INFO     | will attempt to kill all subprocesses of pid=53702
[2026-04-11 17:33:26] 2026-04-11 15:32:26,920 | INFO     | process IDs to be killed: [53702] (in reverse order)
[2026-04-11 17:33:26] 2026-04-11 15:32:27,255 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 17:33:26] 2026-04-11 15:32:27,256 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 17:33:26] 2026-04-11 15:32:27,288 | INFO     | did not find any defunct processes belonging to 53702
[2026-04-11 17:33:26] 2026-04-11 15:32:27,317 | INFO     | did not find any defunct processes belonging to 53702
[2026-04-11 17:33:26] 2026-04-11 15:32:27,317 | INFO     | Ready for new job
[2026-04-11 17:33:26] 2026-04-11 15:32:27,319 | INFO     | **************************************
[2026-04-11 17:33:26] 2026-04-11 15:32:27,319 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 17:33:26] 2026-04-11 15:32:27,319 | INFO     | **************************************
[2026-04-11 17:33:26] 2026-04-11 15:32:27,319 | INFO     | 
[2026-04-11 17:33:26] 2026-04-11 15:32:27,328 | INFO     | architecture information:
[2026-04-11 17:33:26] 2026-04-11 15:32:27,329 | INFO     | executing command: cat /etc/os-release
[2026-04-11 17:33:26] 2026-04-11 15:32:27,355 | INFO     | cat /etc/os-release:
[2026-04-11 17:33:26] NAME="CentOS Linux"
[2026-04-11 17:33:26] VERSION="7 (Core)"
[2026-04-11 17:33:26] ID="centos"
[2026-04-11 17:33:26] ID_LIKE="rhel fedora"
[2026-04-11 17:33:26] VERSION_ID="7"
[2026-04-11 17:33:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 17:33:26] ANSI_COLOR="0;31"
[2026-04-11 17:33:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 17:33:26] HOME_URL="https://www.centos.org/"
[2026-04-11 17:33:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 17:33:26] 
[2026-04-11 17:33:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 17:33:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 17:33:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 17:33:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 17:33:26] 
[2026-04-11 17:33:26] 2026-04-11 15:32:27,356 | INFO     | **************************************
[2026-04-11 17:33:26] 2026-04-11 15:32:27,858 | INFO     | executing command: df -mP /var/lib/boinc/var/slot88/slots/22
[2026-04-11 17:33:26] 2026-04-11 15:32:27,881 | INFO     | sufficient remaining disk space (239608004608 B)
[2026-04-11 17:33:26] 2026-04-11 15:32:27,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 17:33:26] 2026-04-11 15:32:27,882 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 17:33:26] 2026-04-11 15:32:27,882 | INFO     | update_server=False
[2026-04-11 17:33:26] 2026-04-11 15:32:27,882 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 17:33:26] 2026-04-11 15:32:27,962 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-11 17:33:26] 2026-04-11 15:32:27,962 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-11 17:33:26] 2026-04-11 15:32:27,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 17:33:26] 2026-04-11 15:32:27,963 | INFO     | will abort loop
[2026-04-11 17:33:26] 2026-04-11 15:32:28,079 | INFO     | all payload control threads have been joined
[2026-04-11 17:33:26] 2026-04-11 15:32:28,085 | INFO     | all data control threads have been joined
[2026-04-11 17:33:26] 2026-04-11 15:32:28,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 17:33:26] 2026-04-11 15:32:28,887 | INFO     | [job] retrieve thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:28,903 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:28,958 | INFO     | all job control threads have been joined
[2026-04-11 17:33:26] 2026-04-11 15:32:28,968 | INFO     | [job] job monitor thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:29,085 | INFO     | [payload] control thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:29,091 | INFO     | [data] control thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:29,164 | INFO     | [data] copytool_in thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:29,524 | INFO     | [payload] failed_post thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:29,595 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 17:33:26] 2026-04-11 15:32:29,599 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:29,937 | INFO     | [job] validate thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:29,963 | INFO     | [job] control thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:30,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 17:33:26] 2026-04-11 15:32:30,308 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:30,360 | INFO     | [payload] validate_post thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:30,867 | INFO     | [data] copytool_out thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:31,038 | INFO     | [job] queue monitor thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:33,601 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:38,879 | INFO     | job.realtimelogging is not enabled
[2026-04-11 17:33:26] 2026-04-11 15:32:39,884 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 17:33:26] 2026-04-11 15:32:58,102 | INFO     | PID=47922 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-11 17:33:26] 2026-04-11 15:32:58,102 | INFO     | .. there are 22 such processes running
[2026-04-11 17:33:26] 2026-04-11 15:32:58,103 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 17:33:26] 2026-04-11 15:32:58,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 17:33:26] 2026-04-11 15:32:58,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 17:33:26] 2026-04-11 15:33:20,542 | INFO     | [monitor] cgroup control has ended
[2026-04-11 17:33:26] 2026-04-11 15:33:21,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22372418725696)>', '<ExcThread(monitor, started 22372175582976)>']
[2026-04-11 17:33:26] 2026-04-11 15:33:21,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 17:33:26] 2026-04-11 15:33:21,218 | INFO     | [monitor] control thread has ended
[2026-04-11 17:33:26] 2026-04-11 15:33:26,156 | INFO     | all workflow threads have been joined
[2026-04-11 17:33:26] 2026-04-11 15:33:26,156 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 17:33:26] 2026-04-11 15:33:26,156 | INFO     | traces error code: 0
[2026-04-11 17:33:26] 2026-04-11 15:33:26,157 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 17:33:26] 2026-04-11 15:33:26,337 [wrapper] ==== pilot stdout END ====
[2026-04-11 17:33:26] 2026-04-11 15:33:26,341 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 17:33:26] 2026-04-11 15:33:26,345 [wrapper] pilotpid: 47922
[2026-04-11 17:33:26] 2026-04-11 15:33:26,349 [wrapper] Pilot exit status: 0
[2026-04-11 17:33:26] 2026-04-11 15:33:26,370 [wrapper] pandaids: 7083279344
[2026-04-11 17:33:26] 2026-04-11 15:33:26,573 [wrapper] cleanup supervisor_pilot  379626 47923
[2026-04-11 17:33:26] 2026-04-11 15:33:26,577 [wrapper] Test setup, not cleaning
[2026-04-11 17:33:26] 2026-04-11 15:33:26,581 [wrapper] apfmon messages muted
[2026-04-11 17:33:26] 2026-04-11 15:33:26,585 [wrapper] ==== wrapper stdout END ====
[2026-04-11 17:33:26] 2026-04-11 15:33:26,589 [wrapper] ==== wrapper stderr END ====
[2026-04-11 17:33:26]  *** Error codes and diagnostics ***
[2026-04-11 17:33:26]     "exeErrorCode": 0,
[2026-04-11 17:33:26]     "pilotErrorCode": 0,
[2026-04-11 17:33:26]  *** Listing of results directory ***
[2026-04-11 17:33:26] total 420256
[2026-04-11 17:33:26] -rwx------. 1 boinc boinc     36322 Apr  9 23:44 runpilot2-wrapper.sh
[2026-04-11 17:33:26] -rw-r--r--. 1 boinc boinc      5094 Apr  9 23:51 queuedata.json
[2026-04-11 17:33:26] -rw-r--r--. 1 boinc boinc    644190 Apr  9 23:52 pilot3.tar.gz
[2026-04-11 17:33:26] -rw-r--r--. 1 boinc boinc       100 Apr 11 14:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 17:33:26] -rwxr-xr-x. 1 boinc boinc      7986 Apr 11 14:44 run_atlas
[2026-04-11 17:33:26] -rw-r--r--. 1 boinc boinc       105 Apr 11 14:44 job.xml
[2026-04-11 17:33:26] -rw-r--r--. 2 boinc boinc 225145172 Apr 11 14:44 EVNT.49263206._000650.pool.root.1
[2026-04-11 17:33:26] -rw-r--r--. 1 boinc boinc      6612 Apr 11 14:44 init_data.xml
[2026-04-11 17:33:26] -rw-r--r--. 2 boinc boinc     15665 Apr 11 14:44 start_atlas.sh
[2026-04-11 17:33:26] drwxrwx--x. 2 boinc boinc      4096 Apr 11 14:44 shared
[2026-04-11 17:33:26] -rw-r--r--. 2 boinc boinc    656933 Apr 11 14:44 input.tar.gz
[2026-04-11 17:33:26] -rw-r--r--. 1 boinc boinc         0 Apr 11 14:44 boinc_lockfile
[2026-04-11 17:33:26] -rw-r--r--. 1 boinc boinc      2575 Apr 11 14:44 pandaJob.out
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc    997836 Apr 11 14:44 agis_schedconf.cvmfs.json
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc   1511579 Apr 11 14:44 agis_ddmendpoints.agis.ALL.json
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc       443 Apr 11 14:45 workernode_map.json
[2026-04-11 17:33:26] drwx------. 5 boinc boinc      4096 Apr 11 14:45 pilot3
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc 198691051 Apr 11 17:31 HITS.49263208._028568.pool.root.1
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc      1030 Apr 11 17:32 memory_monitor_summary.json
[2026-04-11 17:33:26] -rw-r--r--. 1 boinc boinc       487 Apr 11 17:32 boinc_task_state.xml
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc    292328 Apr 11 17:32 log.49263208._028568.job.log.tgz.1
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc      6374 Apr 11 17:32 heartbeat_new.json
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc      6265 Apr 11 17:32 heartbeat.json
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc        95 Apr 11 17:32 pilot_heartbeat.json
[2026-04-11 17:33:26] -rw-r--r--. 1 boinc boinc      8192 Apr 11 17:33 boinc_mmap_file
[2026-04-11 17:33:26] -rw-r--r--. 1 boinc boinc        27 Apr 11 17:33 wrapper_checkpoint.txt
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc      5087 Apr 11 17:33 pilotlog.txt
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc    929612 Apr 11 17:33 log.49263208._028568.job.log.1
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc       357 Apr 11 17:33 output.list
[2026-04-11 17:33:26] -rw-r--r--. 1 boinc boinc       410 Apr 11 17:33 runtime_log
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc   1239040 Apr 11 17:33 result.tar.gz
[2026-04-11 17:33:26] -rw-r--r--. 1 boinc boinc      8844 Apr 11 17:33 runtime_log.err
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc       666 Apr 11 17:33 1dc5565a292e.diag
[2026-04-11 17:33:26] -rw-r--r--. 1 boinc boinc     21003 Apr 11 17:33 stderr.txt
[2026-04-11 17:33:26] HITS file was successfully produced:
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc 198691051 Apr 11 17:31 shared/HITS.pool.root.1
[2026-04-11 17:33:26]  *** Contents of shared directory: ***
[2026-04-11 17:33:26] total 415788
[2026-04-11 17:33:26] -rw-r--r--. 2 boinc boinc 225145172 Apr 11 14:44 ATLAS.root_0
[2026-04-11 17:33:26] -rw-r--r--. 2 boinc boinc     15665 Apr 11 14:44 start_atlas.sh
[2026-04-11 17:33:26] -rw-r--r--. 2 boinc boinc    656933 Apr 11 14:44 input.tar.gz
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc 198691051 Apr 11 17:31 HITS.pool.root.1
[2026-04-11 17:33:26] -rw-------. 1 boinc boinc   1239040 Apr 11 17:33 result.tar.gz
17:33:27 (43550): run_atlas exited; CPU time 38770.741377
17:33:27 (43550): called boinc_finish(0)

</stderr_txt>
]]>

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