Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:38:02 (2380579): wrapper (7.7.26015): starting
19:38:02 (2380579): wrapper: running run_atlas (--nthreads 10)
[2026-04-09 19:38:02] Arguments: --nthreads 10
[2026-04-09 19:38:02] Threads: 10
[2026-04-09 19:38:02] Checking for CVMFS
[2026-04-09 19:38:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-09 19:38:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-09 19:38:03] Running cvmfs_config stat atlas.cern.ch
[2026-04-09 19:38:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-09 19:38:05] 2.13.3.0 14106 223630 285116 158278 1 573 27310839 40960001 70498 16776704 0 2709905285 99.772 1723414100 44828 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-09 19:38:05] CVMFS is ok
[2026-04-09 19:38:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-09 19:38:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-09 19:38:05] Further information can be found at the LHC@home message board.
[2026-04-09 19:38:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-09 19:38:05] Checking for apptainer binary...
[2026-04-09 19:38:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-09 19:38:05] Running /usr/bin/apptainer --version
[2026-04-09 19:38:05] apptainer version 1.4.5-2.el9
[2026-04-09 19:38:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-09 19:38:05] c8-7-5.aglt2.org
[2026-04-09 19:38:05] apptainer works
[2026-04-09 19:38:05] Set ATHENA_PROC_NUMBER=10
[2026-04-09 19:38:05] Set ATHENA_CORE_NUMBER=10
[2026-04-09 19:38:06] Starting ATLAS job with PandaID=7083279284
[2026-04-09 19:38:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-09 21:12:08]  *** The last 200 lines of the pilot log: ***
[2026-04-09 21:12:08]  status_code=0
[2026-04-09 21:12:08]  storage_token=
[2026-04-09 21:12:08]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-7083279284/log.49263208._028508.job.log.tgz.1
[2026-04-09 21:12:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/27/log.49263208._028508.job.log.tgz.1
[2026-04-09 21:12:08]  workdir=None
[2026-04-09 21:12:08] ]
[2026-04-09 21:12:08] 2026-04-10 01:11:04,160 | INFO     | transferring file log.49263208._028508.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-7083279284/log.49263208._028508.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-04-09 21:12:08] 2026-04-10 01:11:04,160 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-7083279284/log.49263208._028508.job.log.tgz.1 /tmp/boinchome/slots/5/log.49263208._028508.job
[2026-04-09 21:12:08] 2026-04-10 01:11:04,282 | INFO     | adding to output.list: log.49263208._028508.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/27/log.49263208._028508.job.log.tg
[2026-04-09 21:12:08] 2026-04-10 01:11:04,284 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-09 21:12:08] 2026-04-10 01:11:04,284 | INFO     | summary of transferred files:
[2026-04-09 21:12:08] 2026-04-10 01:11:04,285 | INFO     |  -- lfn=log.49263208._028508.job.log.tgz.1, status_code=0, status=transferred
[2026-04-09 21:12:08] 2026-04-10 01:11:04,285 | INFO     | stage-out finished correctly
[2026-04-09 21:12:08] 2026-04-10 01:11:07,621 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-09 21:12:08] 2026-04-10 01:11:07,710 | WARNING  | process 2409540 can no longer be monitored (due to stat problems) - aborting
[2026-04-09 21:12:08] 2026-04-10 01:11:07,734 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7083279284/memory_monitor_summary.json (trf name=prmon)
[2026-04-09 21:12:08] 2026-04-10 01:11:07,734 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7083279284/memory_monitor_summary.json (trf name=prmon)
[2026-04-09 21:12:08] 2026-04-10 01:11:07,735 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-09 21:12:08] 2026-04-10 01:11:07,735 | WARNING  | maxPSS not found in memory monitor output
[2026-04-09 21:12:08] 2026-04-10 01:11:07,735 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3350728 B
[2026-04-09 21:12:08] 2026-04-10 01:11:07,735 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16080 B
[2026-04-09 21:12:08] 2026-04-10 01:11:07,735 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-04-09 21:12:08] 2026-04-10 01:11:07,847 | INFO     | sufficient remaining disk space (169032548352 B)
[2026-04-09 21:12:08] 2026-04-10 01:11:07,848 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-04-09 21:12:08] 2026-04-10 01:11:07,848 | INFO     | size of work directory /tmp/boinchome/slots/5/PanDA_Pilot-7083279284: 3656309 B (within 5033164800 B limit)
[2026-04-09 21:12:08] 2026-04-10 01:11:07,848 | INFO     | pfn file=/tmp/boinchome/slots/5/PanDA_Pilot-7083279284/HITS.49263208._028508.pool.root.1 does not exist (skip from workdir size calculation)
[2026-04-09 21:12:08] 2026-04-10 01:11:07,895 | INFO     | total size of present files: 0 B (workdir size: 3656309 B)
[2026-04-09 21:12:08] 2026-04-10 01:11:07,895 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/5/PanDA_Pilot-7083279284/HITS.49263208._028508.pool.root.1 since it does not exist
[2026-04-09 21:12:08] 2026-04-10 01:11:09,217 | INFO     | job 7083279284 has state=finished
[2026-04-09 21:12:08] 2026-04-10 01:11:09,301 | INFO     | preparing for final server update for job 7083279284 in state='finished'
[2026-04-09 21:12:08] 2026-04-10 01:11:09,301 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-7083279284/jobReport.json
[2026-04-09 21:12:08] 2026-04-10 01:11:09,303 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-04-09 21:12:08] 2026-04-10 01:11:09,303 | INFO     | this job has now completed (state=finished)
[2026-04-09 21:12:08] 2026-04-10 01:11:09,303 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-09 21:12:08] 2026-04-10 01:11:09,303 | INFO     | log transfer has been attempted: DONE
[2026-04-09 21:12:08] 2026-04-10 01:11:09,303 | INFO     | job 7083279284 has finished - writing final server update
[2026-04-09 21:12:08] 2026-04-10 01:11:09,304 | INFO     | total number of processed events: 400 (read)
[2026-04-09 21:12:08] 2026-04-10 01:11:09,388 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7083279284/memory_monitor_summary.json (trf name=prmon)
[2026-04-09 21:12:08] 2026-04-10 01:11:09,388 | INFO     | extracted standard info from prmon json
[2026-04-09 21:12:08] 2026-04-10 01:11:09,388 | INFO     | extracted standard memory fields from prmon json
[2026-04-09 21:12:08] 2026-04-10 01:11:09,388 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-09 21:12:08] 2026-04-10 01:11:09,388 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-09 21:12:08] 2026-04-10 01:11:09,389 | INFO     | fitting pss+swap vs Time
[2026-04-09 21:12:08] 2026-04-10 01:11:09,457 | INFO     | sum of square deviations: 164771137.99999985
[2026-04-09 21:12:08] 2026-04-10 01:11:09,457 | INFO     | sum of deviations: 3808456135.5555563
[2026-04-09 21:12:08] 2026-04-10 01:11:09,457 | INFO     | mean x (centered): 0.0
[2026-04-09 21:12:08] 2026-04-10 01:11:09,457 | INFO     | mean y: 2581489.716049383
[2026-04-09 21:12:08] 2026-04-10 01:11:09,457 | INFO     | intersect: 2581489.716049383
[2026-04-09 21:12:08] 2026-04-10 01:11:09,457 | INFO     | chi2: 0.8295874767799745
[2026-04-09 21:12:08] 2026-04-10 01:11:09,457 | INFO     | current memory leak: 23.11 B/s (using 81 data points, chi2=0.83)
[2026-04-09 21:12:08] 2026-04-10 01:11:09,458 | INFO     | could have reported an average CPU frequency of 3795 MHz (7 samples)
[2026-04-09 21:12:08] 2026-04-10 01:11:09,458 | INFO     | ..............................
[2026-04-09 21:12:08] 2026-04-10 01:11:09,458 | INFO     | . Timing measurements:
[2026-04-09 21:12:08] 2026-04-10 01:11:09,458 | INFO     | . get job = 0 s
[2026-04-09 21:12:08] 2026-04-10 01:11:09,458 | INFO     | . initial setup = 34 s
[2026-04-09 21:12:08] 2026-04-10 01:11:09,458 | INFO     | . payload setup = 94 s
[2026-04-09 21:12:08] 2026-04-10 01:11:09,458 | INFO     | . stage-in = 0 s
[2026-04-09 21:12:08] 2026-04-10 01:11:09,458 | INFO     | . payload execution = 5367 s
[2026-04-09 21:12:08] 2026-04-10 01:11:09,458 | INFO     | . stage-out = 2 s
[2026-04-09 21:12:08] 2026-04-10 01:11:09,458 | INFO     | . log creation = 0 s
[2026-04-09 21:12:08] 2026-04-10 01:11:09,458 | INFO     | ..............................
[2026-04-09 21:12:08] 2026-04-10 01:11:10,015 | INFO     | 
[2026-04-09 21:12:08] 2026-04-10 01:11:10,017 | INFO     | job summary report
[2026-04-09 21:12:08] 2026-04-10 01:11:10,017 | INFO     | --------------------------------------------------
[2026-04-09 21:12:08] 2026-04-10 01:11:10,018 | INFO     | PanDA job id: 7083279284
[2026-04-09 21:12:08] 2026-04-10 01:11:10,018 | INFO     | task id: 49263208
[2026-04-09 21:12:08] 2026-04-10 01:11:10,018 | INFO     | errors: (none)
[2026-04-09 21:12:08] 2026-04-10 01:11:10,018 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-09 21:12:08] 2026-04-10 01:11:10,020 | INFO     | pilot state: finished 
[2026-04-09 21:12:08] 2026-04-10 01:11:10,020 | INFO     | transexitcode: 0
[2026-04-09 21:12:08] 2026-04-10 01:11:10,020 | INFO     | exeerrorcode: 0
[2026-04-09 21:12:08] 2026-04-10 01:11:10,020 | INFO     | exeerrordiag: 
[2026-04-09 21:12:08] 2026-04-10 01:11:10,020 | INFO     | exitcode: 0
[2026-04-09 21:12:08] 2026-04-10 01:11:10,020 | INFO     | exitmsg: OK
[2026-04-09 21:12:08] 2026-04-10 01:11:10,021 | INFO     | cpuconsumptiontime: 23509 s
[2026-04-09 21:12:08] 2026-04-10 01:11:10,021 | INFO     | nevents: 400
[2026-04-09 21:12:08] 2026-04-10 01:11:10,021 | INFO     | neventsw: 0
[2026-04-09 21:12:08] 2026-04-10 01:11:10,021 | INFO     | pid: 2409540
[2026-04-09 21:12:08] 2026-04-10 01:11:10,021 | INFO     | pgrp: 2409540
[2026-04-09 21:12:08] 2026-04-10 01:11:10,021 | INFO     | corecount: 10
[2026-04-09 21:12:08] 2026-04-10 01:11:10,021 | INFO     | event service: False
[2026-04-09 21:12:08] 2026-04-10 01:11:10,021 | INFO     | sizes: {0: 2279665, 1: 2281494, 5466: 2307880, 5471: 2316878, 5474: 2317058, 5476: 2317252}
[2026-04-09 21:12:08] 2026-04-10 01:11:10,043 | INFO     | --------------------------------------------------
[2026-04-09 21:12:08] 2026-04-10 01:11:10,043 | INFO     | 
[2026-04-09 21:12:08] 2026-04-10 01:11:10,043 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-04-09 21:12:08] 2026-04-10 01:11:10,252 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,252 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,252 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,252 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,253 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-09 21:12:08] 2026-04-10 01:11:10,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,253 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-09 21:12:08] 2026-04-10 01:11:10,253 | INFO     | job 7083279284 has completed (purged errors)
[2026-04-09 21:12:08] 2026-04-10 01:11:10,253 | INFO     | overall cleanup function is called
[2026-04-09 21:12:08] 2026-04-10 01:11:11,133 | INFO     | number of running child processes to parent process 2409540: 1
[2026-04-09 21:12:08] 2026-04-10 01:11:11,133 | INFO     | maximum number of monitored processes: 7
[2026-04-09 21:12:08] 2026-04-10 01:11:11,133 | INFO     | aborting job monitoring since job object (job id=7083279284) has expired
[2026-04-09 21:12:08] 2026-04-10 01:11:11,153 | INFO     | PID=2389281 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-09 21:12:08] 2026-04-10 01:11:11,154 | INFO     | .. there are 68 such processes running
[2026-04-09 21:12:08] 2026-04-10 01:11:11,265 | INFO     | --- collectZombieJob: --- 10, [2409540]
[2026-04-09 21:12:08] 2026-04-10 01:11:11,265 | INFO     | zombie collector waiting for pid 2409540
[2026-04-09 21:12:08] 2026-04-10 01:11:11,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-09 21:12:08] 2026-04-10 01:11:11,265 | INFO     | collected zombie processes
[2026-04-09 21:12:08] 2026-04-10 01:11:11,265 | INFO     | will attempt to kill all subprocesses of pid=2409540
[2026-04-09 21:12:08] 2026-04-10 01:11:12,857 | INFO     | process IDs to be killed: [2409540] (in reverse order)
[2026-04-09 21:12:08] 2026-04-10 01:11:13,220 | WARNING  | found no corresponding commands to process id(s)
[2026-04-09 21:12:08] 2026-04-10 01:11:13,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-09 21:12:08] 2026-04-10 01:11:13,453 | INFO     | did not find any defunct processes belonging to 2409540
[2026-04-09 21:12:08] 2026-04-10 01:11:13,820 | INFO     | did not find any defunct processes belonging to 2409540
[2026-04-09 21:12:08] 2026-04-10 01:11:13,820 | INFO     | Ready for new job
[2026-04-09 21:12:08] 2026-04-10 01:11:13,826 | INFO     | **************************************
[2026-04-09 21:12:08] 2026-04-10 01:11:13,826 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-09 21:12:08] 2026-04-10 01:11:13,826 | INFO     | **************************************
[2026-04-09 21:12:08] 2026-04-10 01:11:13,826 | INFO     | 
[2026-04-09 21:12:08] 2026-04-10 01:11:13,836 | INFO     | architecture information:
[2026-04-09 21:12:08] 2026-04-10 01:11:13,844 | INFO     | executing command: cat /etc/os-release
[2026-04-09 21:12:08] 2026-04-10 01:11:14,057 | INFO     | cat /etc/os-release:
[2026-04-09 21:12:08] NAME="CentOS Linux"
[2026-04-09 21:12:08] VERSION="7 (Core)"
[2026-04-09 21:12:08] ID="centos"
[2026-04-09 21:12:08] ID_LIKE="rhel fedora"
[2026-04-09 21:12:08] VERSION_ID="7"
[2026-04-09 21:12:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-09 21:12:08] ANSI_COLOR="0;31"
[2026-04-09 21:12:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-09 21:12:08] HOME_URL="https://www.centos.org/"
[2026-04-09 21:12:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-09 21:12:08] 
[2026-04-09 21:12:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-09 21:12:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-09 21:12:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-09 21:12:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-09 21:12:08] 
[2026-04-09 21:12:08] 2026-04-10 01:11:14,057 | INFO     | **************************************
[2026-04-09 21:12:08] 2026-04-10 01:11:14,561 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-04-09 21:12:08] 2026-04-10 01:11:14,630 | INFO     | sufficient remaining disk space (169033596928 B)
[2026-04-09 21:12:08] 2026-04-10 01:11:14,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-09 21:12:08] 2026-04-10 01:11:14,630 | INFO     | current server update state: UPDATING_FINAL
[2026-04-09 21:12:08] 2026-04-10 01:11:14,630 | INFO     | update_server=False
[2026-04-09 21:12:08] 2026-04-10 01:11:14,630 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-09 21:12:08] 2026-04-10 01:11:14,630 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-09 21:12:08] 2026-04-10 01:11:14,664 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-09 21:12:08] 2026-04-10 01:11:14,664 | INFO     | aborting loop
[2026-04-09 21:12:08] 2026-04-10 01:11:14,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-09 21:12:08] 2026-04-10 01:11:14,873 | INFO     | all payload control threads have been joined
[2026-04-09 21:12:08] 2026-04-10 01:11:15,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-09 21:12:08] 2026-04-10 01:11:15,277 | INFO     | all data control threads have been joined
[2026-04-09 21:12:08] 2026-04-10 01:11:15,637 | INFO     | [job] retrieve thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:15,670 | INFO     | [job] job monitor thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:15,699 | INFO     | [job] validate thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:15,703 | INFO     | [job] create_data_payload thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:15,729 | INFO     | [job] queue monitor thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:15,879 | INFO     | [payload] control thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:15,894 | INFO     | [data] copytool_in thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:15,940 | INFO     | [payload] failed_post thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:16,083 | INFO     | all job control threads have been joined
[2026-04-09 21:12:08] 2026-04-10 01:11:16,282 | INFO     | [data] control thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:16,431 | INFO     | [payload] validate_post thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:16,679 | INFO     | [payload] validate_pre thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:16,679 | INFO     | [payload] execute_payloads thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:17,067 | INFO     | [data] copytool_out thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:17,086 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:17,089 | INFO     | [job] control thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:18,696 | INFO     | [data] queue_monitor thread has finished
[2026-04-09 21:12:08] 2026-04-10 01:11:45,793 | INFO     | PID=2389281 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-09 21:12:08] 2026-04-10 01:11:45,797 | INFO     | .. there are 68 such processes running
[2026-04-09 21:12:08] 2026-04-10 01:11:45,797 | INFO     | found 0 job(s) in 20 queues
[2026-04-09 21:12:08] 2026-04-10 01:11:45,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-09 21:12:08] 2026-04-10 01:11:45,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-09 21:12:08] 2026-04-10 01:12:01,655 | INFO     | [monitor] cgroup control has ended
[2026-04-09 21:12:08] 2026-04-10 01:12:01,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228364642112)>', '<ExcThread(monitor, started 140227653920512)>']
[2026-04-09 21:12:08] 2026-04-10 01:12:02,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-09 21:12:08] 2026-04-10 01:12:02,932 | INFO     | [monitor] control thread has ended
[2026-04-09 21:12:08] 2026-04-10 01:12:06,948 | INFO     | all workflow threads have been joined
[2026-04-09 21:12:08] 2026-04-10 01:12:06,948 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-09 21:12:08] 2026-04-10 01:12:06,948 | INFO     | traces error code: 0
[2026-04-09 21:12:08] 2026-04-10 01:12:06,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-09 21:12:08] 2026-04-10 01:12:07,249 [wrapper] ==== pilot stdout END ====
[2026-04-09 21:12:08] 2026-04-10 01:12:07,270 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-09 21:12:08] 2026-04-10 01:12:07,290 [wrapper] pilotpid: 2389281
[2026-04-09 21:12:08] 2026-04-10 01:12:07,368 [wrapper] Pilot exit status: 0
[2026-04-09 21:12:08] 2026-04-10 01:12:07,565 [wrapper] pandaids: 7083279284
[2026-04-09 21:12:08] 2026-04-10 01:12:08,000 [wrapper] cleanup supervisor_pilot 3258887 2389282
[2026-04-09 21:12:08] 2026-04-10 01:12:08,035 [wrapper] Test setup, not cleaning
[2026-04-09 21:12:08] 2026-04-10 01:12:08,047 [wrapper] apfmon messages muted
[2026-04-09 21:12:08] 2026-04-10 01:12:08,103 [wrapper] ==== wrapper stdout END ====
[2026-04-09 21:12:08] 2026-04-10 01:12:08,138 [wrapper] ==== wrapper stderr END ====
[2026-04-09 21:12:08]  *** Error codes and diagnostics ***
[2026-04-09 21:12:08]     "exeErrorCode": 0,
[2026-04-09 21:12:08]     "pilotErrorCode": 0,
[2026-04-09 21:12:08]  *** Listing of results directory ***
[2026-04-09 21:12:08] total 420560
[2026-04-09 21:12:08] -rw-r--r--. 1 boincer umatlas    644190 Apr  9 17:37 pilot3.tar.gz
[2026-04-09 21:12:08] -rwx------. 1 boincer umatlas     36322 Apr  9 17:42 runpilot2-wrapper.sh
[2026-04-09 21:12:08] -rw-r--r--. 1 boincer umatlas      5094 Apr  9 17:49 queuedata.json
[2026-04-09 21:12:08] -rw-r--r--. 1 boincer umatlas       100 Apr  9 19:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-09 21:12:08] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  9 19:38 run_atlas
[2026-04-09 21:12:08] -rw-r--r--. 1 boincer umatlas       105 Apr  9 19:38 job.xml
[2026-04-09 21:12:08] -rw-r--r--. 2 boincer umatlas 226118121 Apr  9 19:38 EVNT.49263206._000647.pool.root.1
[2026-04-09 21:12:08] -rw-r--r--. 2 boincer umatlas     15665 Apr  9 19:38 start_atlas.sh
[2026-04-09 21:12:08] drwxrwx--x. 2 boincer umatlas      4096 Apr  9 19:38 shared
[2026-04-09 21:12:08] -rw-r--r--. 2 boincer umatlas    656933 Apr  9 19:38 input.tar.gz
[2026-04-09 21:12:08] -rw-r--r--. 1 boincer umatlas         0 Apr  9 19:38 boinc_lockfile
[2026-04-09 21:12:08] -rw-r--r--. 1 boincer umatlas      2574 Apr  9 19:38 pandaJob.out
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas        57 Apr  9 19:38 setup.sh.local
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas    997884 Apr  9 19:39 agis_schedconf.cvmfs.json
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas   1511579 Apr  9 19:39 agis_ddmendpoints.agis.ALL.json
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas       430 Apr  9 19:39 workernode_map.json
[2026-04-09 21:12:08] drwx------. 5 boincer umatlas      4096 Apr  9 19:39 pilot3
[2026-04-09 21:12:08] -rw-r--r--. 1 boincer umatlas      7087 Apr  9 21:09 init_data.xml
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas 198888411 Apr  9 21:10 HITS.49263208._028508.pool.root.1
[2026-04-09 21:12:08] -rw-r--r--. 1 boincer umatlas       487 Apr  9 21:10 boinc_task_state.xml
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas      1064 Apr  9 21:10 memory_monitor_summary.json
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas    325903 Apr  9 21:11 log.49263208._028508.job.log.tgz.1
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas      6379 Apr  9 21:11 heartbeat_new.json
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas      6270 Apr  9 21:11 heartbeat.json
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas        95 Apr  9 21:11 pilot_heartbeat.json
[2026-04-09 21:12:08] -rw-r--r--. 1 boincer umatlas      8192 Apr  9 21:12 boinc_mmap_file
[2026-04-09 21:12:08] -rw-r--r--. 1 boincer umatlas        27 Apr  9 21:12 wrapper_checkpoint.txt
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas      4820 Apr  9 21:12 pilotlog.txt
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas    463714 Apr  9 21:12 log.49263208._028508.job.log.1
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas       357 Apr  9 21:12 output.list
[2026-04-09 21:12:08] -rw-r--r--. 1 boincer umatlas       410 Apr  9 21:12 runtime_log
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas    808960 Apr  9 21:12 result.tar.gz
[2026-04-09 21:12:08] -rw-r--r--. 1 boincer umatlas      8955 Apr  9 21:12 runtime_log.err
[2026-04-09 21:12:08] -rw-------. 1 boincer umatlas       653 Apr  9 21:12 1d5be8ab671b.diag
[2026-04-09 21:12:08] -rw-r--r--. 1 boincer umatlas     22460 Apr  9 21:12 stderr.txt
[2026-04-09 21:12:09] HITS file was successfully produced:
[2026-04-09 21:12:09] -rw-------. 1 boincer umatlas 198888411 Apr  9 21:10 shared/HITS.pool.root.1
[2026-04-09 21:12:09]  *** Contents of shared directory: ***
[2026-04-09 21:12:09] total 416508
[2026-04-09 21:12:09] -rw-r--r--. 2 boincer umatlas 226118121 Apr  9 19:38 ATLAS.root_0
[2026-04-09 21:12:09] -rw-r--r--. 2 boincer umatlas     15665 Apr  9 19:38 start_atlas.sh
[2026-04-09 21:12:09] -rw-r--r--. 2 boincer umatlas    656933 Apr  9 19:38 input.tar.gz
[2026-04-09 21:12:09] -rw-------. 1 boincer umatlas 198888411 Apr  9 21:10 HITS.pool.root.1
[2026-04-09 21:12:09] -rw-------. 1 boincer umatlas    808960 Apr  9 21:12 result.tar.gz
21:12:10 (2380579): run_atlas exited; CPU time 23718.172959
21:12:10 (2380579): called boinc_finish(0)

</stderr_txt>
]]>

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