Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:28:45 (3804800): wrapper (7.7.26015): starting
20:28:45 (3804800): wrapper: running run_atlas (--nthreads 12)
[2026-04-10 20:28:45] Arguments: --nthreads 12
[2026-04-10 20:28:45] Threads: 12
[2026-04-10 20:28:45] Checking for CVMFS
[2026-04-10 20:28:45] No cvmfs_config command found, will try listing directly
[2026-04-10 20:28:45] CVMFS is ok
[2026-04-10 20:28:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-10 20:28:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-10 20:28:45] Further information can be found at the LHC@home message board.
[2026-04-10 20:28:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-10 20:28:45] Checking for apptainer binary...
[2026-04-10 20:28:45] which: no apptainer in ((null))
[2026-04-10 20:28:45] apptainer is not installed, using version from CVMFS
[2026-04-10 20:28:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-10 20:28:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot180/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-04-10 20:28:45] apptainer works
[2026-04-10 20:28:45] Set ATHENA_PROC_NUMBER=12
[2026-04-10 20:28:45] Set ATHENA_CORE_NUMBER=12
[2026-04-10 20:28:45] Starting ATLAS job with PandaID=7069729679
[2026-04-10 20:28:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot180/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-10 21:30:06]  *** The last 200 lines of the pilot log: ***
[2026-04-10 21:30:06] 2026-04-10 19:29:07,626 | INFO     | summary of transferred files:
[2026-04-10 21:30:06] 2026-04-10 19:29:07,626 | INFO     |  -- lfn=log.49176069._000386.job.log.tgz.1, status_code=0, status=transferred
[2026-04-10 21:30:06] 2026-04-10 19:29:07,626 | INFO     | stage-out finished correctly
[2026-04-10 21:30:06] 2026-04-10 19:29:08,327 | WARNING  | process 3815104 can no longer be monitored (due to stat problems) - aborting
[2026-04-10 21:30:06] 2026-04-10 19:29:08,327 | INFO     | using path: /var/lib/boinc/var/slot180/slots/1/PanDA_Pilot-7069729679/memory_monitor_summary.json (trf name=prmon)
[2026-04-10 21:30:06] 2026-04-10 19:29:08,662 | INFO     | number of running child processes to parent process 3815104: 1
[2026-04-10 21:30:06] 2026-04-10 19:29:08,662 | INFO     | maximum number of monitored processes: 6
[2026-04-10 21:30:06] 2026-04-10 19:29:08,662 | INFO     | will send heartbeat for job in 'finished' state
[2026-04-10 21:30:06] 2026-04-10 19:29:08,662 | INFO     | note: will only send 'running' state to server to prevent sending any final state too early
[2026-04-10 21:30:06] 2026-04-10 19:29:08,662 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-10 21:30:06] 2026-04-10 19:29:08,662 | INFO     | log transfer has been attempted: DONE
[2026-04-10 21:30:06] 2026-04-10 19:29:08,662 | INFO     | job 7069729679 has state 'running' - writing heartbeat
[2026-04-10 21:30:06] 2026-04-10 19:29:08,662 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1884934/.job.ad'
[2026-04-10 21:30:06] 2026-04-10 19:29:08,662 | INFO     | total number of processed events: 400 (read)
[2026-04-10 21:30:06] 2026-04-10 19:29:08,679 | INFO     | using path: /var/lib/boinc/var/slot180/slots/1/PanDA_Pilot-7069729679/memory_monitor_summary.json (trf name=prmon)
[2026-04-10 21:30:06] 2026-04-10 19:29:08,680 | INFO     | extracted standard info from prmon json
[2026-04-10 21:30:06] 2026-04-10 19:29:08,680 | INFO     | extracted standard memory fields from prmon json
[2026-04-10 21:30:06] 2026-04-10 19:29:08,680 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-10 21:30:06] 2026-04-10 19:29:08,680 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-10 21:30:06] 2026-04-10 19:29:08,681 | INFO     | fitting pss+swap vs Time
[2026-04-10 21:30:06] 2026-04-10 19:29:08,681 | INFO     | sum of square deviations: 43584073.0
[2026-04-10 21:30:06] 2026-04-10 19:29:08,681 | INFO     | sum of deviations: 117394713.49999999
[2026-04-10 21:30:06] 2026-04-10 19:29:08,681 | INFO     | mean x (centered): 0.0
[2026-04-10 21:30:06] 2026-04-10 19:29:08,681 | INFO     | mean y: 2708895.5576923075
[2026-04-10 21:30:06] 2026-04-10 19:29:08,681 | INFO     | intersect: 2708895.5576923075
[2026-04-10 21:30:06] 2026-04-10 19:29:08,681 | INFO     | chi2: 0.001006041988298872
[2026-04-10 21:30:06] 2026-04-10 19:29:08,681 | INFO     | current memory leak: 2.69 B/s (using 52 data points, chi2=0.00)
[2026-04-10 21:30:06] 2026-04-10 19:29:08,681 | INFO     | could have reported an average CPU frequency of 3615 MHz (5 samples)
[2026-04-10 21:30:06] 2026-04-10 19:29:10,394 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-10 21:30:06] 2026-04-10 19:29:11,185 | INFO     | monitor loop #269: job 0:7069729679 is in state 'finished'
[2026-04-10 21:30:06] 2026-04-10 19:29:11,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-10 21:30:06] 2026-04-10 19:29:11,754 | INFO     | job 7069729679 has state=finished
[2026-04-10 21:30:06] 2026-04-10 19:29:11,755 | INFO     | preparing for final server update for job 7069729679 in state='finished'
[2026-04-10 21:30:06] 2026-04-10 19:29:11,755 | INFO     | reading metadata from: /var/lib/boinc/var/slot180/slots/1/PanDA_Pilot-7069729679/jobReport.json
[2026-04-10 21:30:06] 2026-04-10 19:29:11,756 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot180/slots/1/workernode_map.json
[2026-04-10 21:30:06] 2026-04-10 19:29:11,756 | INFO     | this job has now completed (state=finished)
[2026-04-10 21:30:06] 2026-04-10 19:29:11,756 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-10 21:30:06] 2026-04-10 19:29:11,756 | INFO     | log transfer has been attempted: DONE
[2026-04-10 21:30:06] 2026-04-10 19:29:11,756 | INFO     | job 7069729679 has finished - writing final server update
[2026-04-10 21:30:06] 2026-04-10 19:29:11,757 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1884934/.job.ad'
[2026-04-10 21:30:06] 2026-04-10 19:29:11,757 | INFO     | total number of processed events: 400 (read)
[2026-04-10 21:30:06] 2026-04-10 19:29:11,774 | INFO     | using path: /var/lib/boinc/var/slot180/slots/1/PanDA_Pilot-7069729679/memory_monitor_summary.json (trf name=prmon)
[2026-04-10 21:30:06] 2026-04-10 19:29:11,774 | INFO     | extracted standard info from prmon json
[2026-04-10 21:30:06] 2026-04-10 19:29:11,774 | INFO     | extracted standard memory fields from prmon json
[2026-04-10 21:30:06] 2026-04-10 19:29:11,774 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-10 21:30:06] 2026-04-10 19:29:11,774 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-10 21:30:06] 2026-04-10 19:29:11,775 | INFO     | fitting pss+swap vs Time
[2026-04-10 21:30:06] 2026-04-10 19:29:11,775 | INFO     | sum of square deviations: 43584073.0
[2026-04-10 21:30:06] 2026-04-10 19:29:11,775 | INFO     | sum of deviations: 117394713.49999999
[2026-04-10 21:30:06] 2026-04-10 19:29:11,775 | INFO     | mean x (centered): 0.0
[2026-04-10 21:30:06] 2026-04-10 19:29:11,775 | INFO     | mean y: 2708895.5576923075
[2026-04-10 21:30:06] 2026-04-10 19:29:11,775 | INFO     | intersect: 2708895.5576923075
[2026-04-10 21:30:06] 2026-04-10 19:29:11,776 | INFO     | chi2: 0.001006041988298872
[2026-04-10 21:30:06] 2026-04-10 19:29:11,776 | INFO     | current memory leak: 2.69 B/s (using 52 data points, chi2=0.00)
[2026-04-10 21:30:06] 2026-04-10 19:29:11,776 | INFO     | could have reported an average CPU frequency of 3615 MHz (6 samples)
[2026-04-10 21:30:06] 2026-04-10 19:29:11,776 | INFO     | ..............................
[2026-04-10 21:30:06] 2026-04-10 19:29:11,776 | INFO     | . Timing measurements:
[2026-04-10 21:30:06] 2026-04-10 19:29:11,776 | INFO     | . get job = 0 s
[2026-04-10 21:30:06] 2026-04-10 19:29:11,776 | INFO     | . initial setup = 4 s
[2026-04-10 21:30:06] 2026-04-10 19:29:11,776 | INFO     | . payload setup = 6 s
[2026-04-10 21:30:06] 2026-04-10 19:29:11,776 | INFO     | . stage-in = 0 s
[2026-04-10 21:30:06] 2026-04-10 19:29:11,776 | INFO     | . payload execution = 3589 s
[2026-04-10 21:30:06] 2026-04-10 19:29:11,776 | INFO     | . stage-out = 0 s
[2026-04-10 21:30:06] 2026-04-10 19:29:11,776 | INFO     | . log creation = 0 s
[2026-04-10 21:30:06] 2026-04-10 19:29:11,776 | INFO     | ..............................
[2026-04-10 21:30:06] 2026-04-10 19:29:11,977 | INFO     | 
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | job summary report
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | --------------------------------------------------
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | PanDA job id: 7069729679
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | task id: 49176069
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | errors: (none)
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | pilot state: finished 
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | transexitcode: 0
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | exeerrorcode: 0
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | exeerrordiag: 
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | exitcode: 0
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | exitmsg: OK
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | cpuconsumptiontime: 39784 s
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | nevents: 400
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | neventsw: 0
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | pid: 3815104
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | pgrp: 3815104
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | corecount: 12
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | event service: False
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | sizes: {0: 2279776, 1: 2281548, 11: 2281548, 3599: 2307283, 3600: 2316360, 3603: 2316586, 3605: 2316738}
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | --------------------------------------------------
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | 
[2026-04-10 21:30:06] 2026-04-10 19:29:11,978 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot180/slots/1
[2026-04-10 21:30:06] 2026-04-10 19:29:11,995 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,995 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | job 7069729679 has completed (purged errors)
[2026-04-10 21:30:06] 2026-04-10 19:29:11,996 | INFO     | overall cleanup function is called
[2026-04-10 21:30:06] 2026-04-10 19:29:13,003 | INFO     | --- collectZombieJob: --- 10, [3815104]
[2026-04-10 21:30:06] 2026-04-10 19:29:13,003 | INFO     | zombie collector waiting for pid 3815104
[2026-04-10 21:30:06] 2026-04-10 19:29:13,003 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-10 21:30:06] 2026-04-10 19:29:13,003 | INFO     | collected zombie processes
[2026-04-10 21:30:06] 2026-04-10 19:29:13,003 | INFO     | will attempt to kill all subprocesses of pid=3815104
[2026-04-10 21:30:06] 2026-04-10 19:29:13,329 | INFO     | process IDs to be killed: [3815104] (in reverse order)
[2026-04-10 21:30:06] 2026-04-10 19:29:13,474 | WARNING  | found no corresponding commands to process id(s)
[2026-04-10 21:30:06] 2026-04-10 19:29:13,475 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-10 21:30:06] 2026-04-10 19:29:13,496 | INFO     | did not find any defunct processes belonging to 3815104
[2026-04-10 21:30:06] 2026-04-10 19:29:13,517 | INFO     | did not find any defunct processes belonging to 3815104
[2026-04-10 21:30:06] 2026-04-10 19:29:13,517 | INFO     | Ready for new job
[2026-04-10 21:30:06] 2026-04-10 19:29:13,518 | INFO     | **************************************
[2026-04-10 21:30:06] 2026-04-10 19:29:13,518 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-10 21:30:06] 2026-04-10 19:29:13,518 | INFO     | **************************************
[2026-04-10 21:30:06] 2026-04-10 19:29:13,518 | INFO     | 
[2026-04-10 21:30:06] 2026-04-10 19:29:13,523 | INFO     | architecture information:
[2026-04-10 21:30:06] 2026-04-10 19:29:13,523 | INFO     | executing command: cat /etc/os-release
[2026-04-10 21:30:06] 2026-04-10 19:29:13,537 | INFO     | cat /etc/os-release:
[2026-04-10 21:30:06] NAME="CentOS Linux"
[2026-04-10 21:30:06] VERSION="7 (Core)"
[2026-04-10 21:30:06] ID="centos"
[2026-04-10 21:30:06] ID_LIKE="rhel fedora"
[2026-04-10 21:30:06] VERSION_ID="7"
[2026-04-10 21:30:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-10 21:30:06] ANSI_COLOR="0;31"
[2026-04-10 21:30:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-10 21:30:06] HOME_URL="https://www.centos.org/"
[2026-04-10 21:30:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-10 21:30:06] 
[2026-04-10 21:30:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-10 21:30:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-10 21:30:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-10 21:30:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-10 21:30:06] 
[2026-04-10 21:30:06] 2026-04-10 19:29:13,537 | INFO     | **************************************
[2026-04-10 21:30:06] 2026-04-10 19:29:14,040 | INFO     | executing command: df -mP /var/lib/boinc/var/slot180/slots/1
[2026-04-10 21:30:06] 2026-04-10 19:29:14,055 | INFO     | sufficient remaining disk space (188777234432 B)
[2026-04-10 21:30:06] 2026-04-10 19:29:14,055 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-10 21:30:06] 2026-04-10 19:29:14,056 | INFO     | current server update state: UPDATING_FINAL
[2026-04-10 21:30:06] 2026-04-10 19:29:14,056 | INFO     | update_server=False
[2026-04-10 21:30:06] 2026-04-10 19:29:14,056 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-10 21:30:06] 2026-04-10 19:29:14,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-10 21:30:06] 2026-04-10 19:29:14,261 | INFO     | all data control threads have been joined
[2026-04-10 21:30:06] 2026-04-10 19:29:14,331 | INFO     | all payload control threads have been joined
[2026-04-10 21:30:06] 2026-04-10 19:29:14,347 | INFO     | all job control threads have been joined
[2026-04-10 21:30:06] 2026-04-10 19:29:14,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-10 21:30:06] 2026-04-10 19:29:14,697 | INFO     | aborting loop
[2026-04-10 21:30:06] 2026-04-10 19:29:15,061 | INFO     | [job] retrieve thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:15,158 | INFO     | [payload] execute_payloads thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:15,271 | INFO     | [data] control thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:15,336 | INFO     | [payload] control thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:15,352 | INFO     | [job] control thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:15,584 | INFO     | [payload] failed_post thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:15,702 | INFO     | [job] job monitor thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:16,062 | INFO     | [data] copytool_out thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:16,112 | INFO     | [job] validate thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:16,122 | INFO     | [job] create_data_payload thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:16,136 | INFO     | [payload] validate_post thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:16,170 | INFO     | [payload] validate_pre thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:16,431 | INFO     | [data] copytool_in thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:16,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-10 21:30:06] 2026-04-10 19:29:16,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-10 21:30:06] 2026-04-10 19:29:17,831 | INFO     | [job] queue monitor thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:20,451 | INFO     | [data] queue_monitor thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:24,145 | INFO     | job.realtimelogging is not enabled
[2026-04-10 21:30:06] 2026-04-10 19:29:25,150 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-10 21:30:06] 2026-04-10 19:29:45,201 | INFO     | PID=3809335 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-10 21:30:06] 2026-04-10 19:29:45,201 | INFO     | .. there are 15 such processes running
[2026-04-10 21:30:06] 2026-04-10 19:29:45,202 | INFO     | found 0 job(s) in 20 queues
[2026-04-10 21:30:06] 2026-04-10 19:29:45,202 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-10 21:30:06] 2026-04-10 19:29:45,202 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-10 21:30:06] 2026-04-10 19:30:01,586 | INFO     | [monitor] cgroup control has ended
[2026-04-10 21:30:06] 2026-04-10 19:30:01,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22511553365824)>', '<ExcThread(monitor, started 22511304828672)>']
[2026-04-10 21:30:06] 2026-04-10 19:30:02,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-10 21:30:06] 2026-04-10 19:30:02,278 | INFO     | [monitor] control thread has ended
[2026-04-10 21:30:06] 2026-04-10 19:30:06,702 | INFO     | all workflow threads have been joined
[2026-04-10 21:30:06] 2026-04-10 19:30:06,702 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-10 21:30:06] 2026-04-10 19:30:06,702 | INFO     | traces error code: 0
[2026-04-10 21:30:06] 2026-04-10 19:30:06,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-10 21:30:06] 2026-04-10 19:30:06,807 [wrapper] ==== pilot stdout END ====
[2026-04-10 21:30:06] 2026-04-10 19:30:06,809 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-10 21:30:06] 2026-04-10 19:30:06,811 [wrapper] pilotpid: 3809335
[2026-04-10 21:30:06] 2026-04-10 19:30:06,814 [wrapper] Pilot exit status: 0
[2026-04-10 21:30:06] 2026-04-10 19:30:06,821 [wrapper] pandaids: 7069729679
[2026-04-10 21:30:06] 2026-04-10 19:30:06,923 [wrapper] cleanup supervisor_pilot   80956 3809336
[2026-04-10 21:30:06] 2026-04-10 19:30:06,926 [wrapper] Test setup, not cleaning
[2026-04-10 21:30:06] 2026-04-10 19:30:06,928 [wrapper] apfmon messages muted
[2026-04-10 21:30:06] 2026-04-10 19:30:06,931 [wrapper] ==== wrapper stdout END ====
[2026-04-10 21:30:06] 2026-04-10 19:30:06,933 [wrapper] ==== wrapper stderr END ====
[2026-04-10 21:30:06]  *** Error codes and diagnostics ***
[2026-04-10 21:30:06]     "exeErrorCode": 0,
[2026-04-10 21:30:06]     "pilotErrorCode": 0,
[2026-04-10 21:30:06]  *** Listing of results directory ***
[2026-04-10 21:30:06] total 421208
[2026-04-10 21:30:06] -rwx------. 1 boinc boinc     36322 Apr  9 19:59 runpilot2-wrapper.sh
[2026-04-10 21:30:06] -rw-r--r--. 1 boinc boinc    644190 Apr  9 20:14 pilot3.tar.gz
[2026-04-10 21:30:06] -rw-r--r--. 1 boinc boinc      5094 Apr  9 20:38 queuedata.json
[2026-04-10 21:30:06] -rw-r--r--. 1 boinc boinc       100 Apr 10 20:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-10 21:30:06] -rwxr-xr-x. 1 boinc boinc      7986 Apr 10 20:28 run_atlas
[2026-04-10 21:30:06] -rw-r--r--. 1 boinc boinc       105 Apr 10 20:28 job.xml
[2026-04-10 21:30:06] -rw-r--r--. 2 boinc boinc 220842435 Apr 10 20:28 EVNT.49132417._000004.pool.root.1
[2026-04-10 21:30:06] -rw-r--r--. 1 boinc boinc      6628 Apr 10 20:28 init_data.xml
[2026-04-10 21:30:06] -rw-r--r--. 2 boinc boinc     15665 Apr 10 20:28 start_atlas.sh
[2026-04-10 21:30:06] drwxrwx--x. 2 boinc boinc      4096 Apr 10 20:28 shared
[2026-04-10 21:30:06] -rw-r--r--. 2 boinc boinc    656947 Apr 10 20:28 input.tar.gz
[2026-04-10 21:30:06] -rw-r--r--. 1 boinc boinc         0 Apr 10 20:28 boinc_lockfile
[2026-04-10 21:30:06] -rw-r--r--. 1 boinc boinc      2611 Apr 10 20:28 pandaJob.out
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc    997876 Apr 10 20:28 agis_schedconf.cvmfs.json
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc   1511579 Apr 10 20:28 agis_ddmendpoints.agis.ALL.json
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc       444 Apr 10 20:28 workernode_map.json
[2026-04-10 21:30:06] drwx------. 5 boinc boinc      4096 Apr 10 20:28 pilot3
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc 204938713 Apr 10 21:28 HITS.49176069._000386.pool.root.1
[2026-04-10 21:30:06] -rw-r--r--. 1 boinc boinc       487 Apr 10 21:28 boinc_task_state.xml
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc      1031 Apr 10 21:29 memory_monitor_summary.json
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc    359666 Apr 10 21:29 log.49176069._000386.job.log.tgz.1
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc      6379 Apr 10 21:29 heartbeat_new.json
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc      6270 Apr 10 21:29 heartbeat.json
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc        95 Apr 10 21:29 pilot_heartbeat.json
[2026-04-10 21:30:06] -rw-r--r--. 1 boinc boinc        27 Apr 10 21:30 wrapper_checkpoint.txt
[2026-04-10 21:30:06] -rw-r--r--. 1 boinc boinc      8192 Apr 10 21:30 boinc_mmap_file
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc      4902 Apr 10 21:30 pilotlog.txt
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc    377960 Apr 10 21:30 log.49176069._000386.job.log.1
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc       357 Apr 10 21:30 output.list
[2026-04-10 21:30:06] -rw-r--r--. 1 boinc boinc       410 Apr 10 21:30 runtime_log
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc    757760 Apr 10 21:30 result.tar.gz
[2026-04-10 21:30:06] -rw-r--r--. 1 boinc boinc      8845 Apr 10 21:30 runtime_log.err
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc       663 Apr 10 21:30 e8fade84e147.diag
[2026-04-10 21:30:06] -rw-r--r--. 1 boinc boinc     21718 Apr 10 21:30 stderr.txt
[2026-04-10 21:30:06] HITS file was successfully produced:
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc 204938713 Apr 10 21:28 shared/HITS.pool.root.1
[2026-04-10 21:30:06]  *** Contents of shared directory: ***
[2026-04-10 21:30:06] total 417212
[2026-04-10 21:30:06] -rw-r--r--. 2 boinc boinc 220842435 Apr 10 20:28 ATLAS.root_0
[2026-04-10 21:30:06] -rw-r--r--. 2 boinc boinc     15665 Apr 10 20:28 start_atlas.sh
[2026-04-10 21:30:06] -rw-r--r--. 2 boinc boinc    656947 Apr 10 20:28 input.tar.gz
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc 204938713 Apr 10 21:28 HITS.pool.root.1
[2026-04-10 21:30:06] -rw-------. 1 boinc boinc    757760 Apr 10 21:30 result.tar.gz
21:30:08 (3804800): run_atlas exited; CPU time 39901.971912
21:30:08 (3804800): called boinc_finish(0)

</stderr_txt>
]]>

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