Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-10 02:26:00 (6848): vboxwrapper version 26210
2026-04-10 02:26:00 (6848): BOINC client version: 7.22.2
2026-04-10 02:26:00 (6848): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-04-10 02:26:00 (6848): Successfully copied 'init_data.xml' to the shared directory.
2026-04-10 02:26:01 (6848): Create VM. (boinc_2c2ef32cea0ffe66, slot#8)
2026-04-10 02:26:01 (6848): Setting Memory Size for VM. (4800MB)
2026-04-10 02:26:01 (6848): Setting CPU Count for VM. (8)
2026-04-10 02:26:02 (6848): Setting Chipset Options for VM.
2026-04-10 02:26:02 (6848): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-10 02:26:02 (6848): Setting Boot Options for VM.
2026-04-10 02:26:03 (6848): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-10 02:26:03 (6848): Enabling VM Network Access.
2026-04-10 02:26:03 (6848): Disabling USB Support for VM.
2026-04-10 02:26:03 (6848): Disabling COM Port Support for VM.
2026-04-10 02:26:04 (6848): Disabling LPT Port Support for VM.
2026-04-10 02:26:04 (6848): Disabling Audio Support for VM.
2026-04-10 02:26:04 (6848): Disabling Clipboard Support for VM.
2026-04-10 02:26:04 (6848): Disabling Drag and Drop Support for VM.
2026-04-10 02:26:05 (6848): Adding storage controller(s) to VM.
2026-04-10 02:26:05 (6848): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-10 02:26:05 (6848): Adding VirtualBox Guest Additions to VM.
2026-04-10 02:26:06 (6848): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-10 02:26:06 (6848): forwarding host port 65166 to guest port 80
2026-04-10 02:26:06 (6848): Enabling remote desktop for VM.
2026-04-10 02:26:06 (6848): Required extension pack not installed, remote desktop not enabled.
2026-04-10 02:26:06 (6848): Enabling shared directory for VM.
2026-04-10 02:26:07 (6848): Starting VM using VBoxManage interface. (boinc_2c2ef32cea0ffe66, slot#8)
2026-04-10 02:26:10 (6848): Successfully started VM. (PID = '9144')
2026-04-10 02:26:10 (6848): Reporting VM Process ID to BOINC.
2026-04-10 02:26:10 (6848): Guest Log: BIOS: VirtualBox 6.1.34
2026-04-10 02:26:10 (6848): Guest Log: CPUID EDX: 0x178bfbff
2026-04-10 02:26:10 (6848): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-10 02:26:10 (6848): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-10 02:26:10 (6848): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-10 02:26:10 (6848): Detected: Web Application Enabled (http://localhost:65166)
2026-04-10 02:26:10 (6848): Preference change detected
2026-04-10 02:26:10 (6848): Setting CPU throttle for VM. (100%)
2026-04-10 02:26:10 (6848): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-10 02:26:12 (6848): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-10 02:26:12 (6848): Guest Log: BIOS: Booting from Hard Disk...
2026-04-10 02:26:15 (6848): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-10 02:26:15 (6848): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-10 02:26:15 (6848): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-10 02:27:38 (6848): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-10 02:27:38 (6848): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-04-10 02:27:43 (6848): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-10 02:27:43 (6848): Guest Log: 00:00:00.000181 main     Log opened 2026-04-10T02:27:41.863579000Z
2026-04-10 02:27:43 (6848): Guest Log: 00:00:00.000267 main     OS Product: Linux
2026-04-10 02:27:43 (6848): Guest Log: 00:00:00.000298 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-10 02:27:43 (6848): Guest Log: 00:00:00.000321 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-10 02:27:43 (6848): Guest Log: 00:00:00.000346 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-10 02:27:43 (6848): Guest Log: 00:00:00.000347 main     Process ID: 1371
2026-04-10 02:27:43 (6848): Guest Log: 00:00:00.000347 main     Package type: LINUX_64BITS_GENERIC
2026-04-10 02:27:43 (6848): Guest Log: 00:00:00.000993 main     5.2.32 r132073 started. Verbose level = 0
2026-04-10 02:27:43 (6848): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-10 02:27:43 (6848): Guest Log: [INFO] Mounting shared directory
2026-04-10 02:27:43 (6848): Guest Log: [INFO] Checking for init_data.xml
2026-04-10 02:27:46 (6848): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-10 02:27:46 (6848): Guest Log: [INFO] Detected branch: prod
2026-04-10 02:27:46 (6848): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-10 02:27:46 (6848): Guest Log: Copying input files
2026-04-10 02:27:47 (6848): Guest Log: Copied input files into RunAtlas.
2026-04-10 02:27:47 (6848): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-10 02:27:47 (6848): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-10 02:27:47 (6848): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-10 02:27:47 (6848): Guest Log: Further information can be found at the LHC@home message board.
2026-04-10 02:27:53 (6848): Guest Log: 00:00:10.002790 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 209 861 299 000ns (GuestNow=1 775 780 852 004 414 000 ns GuestLast=1 775 788 061 865 713 000 ns fSetTimeLastLoop=true )
2026-04-10 02:27:56 (6848): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-10 02:27:56 (6848): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-10 02:27:56 (6848): Guest Log: 2.6.3.0 1647 0 32212 158279 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-10 02:27:56 (6848): Guest Log: copied the webapp to /var/www
2026-04-10 02:27:56 (6848): Guest Log: ATHENA_PROC_NUMBER=8
2026-04-10 02:27:56 (6848): Guest Log: ATHENA_CORE_NUMBER=8
2026-04-10 02:27:57 (6848): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-10 02:27:57 (6848): Guest Log:  *** Starting ATLAS job. (PandaID=7083279453 taskID=49263208) ***
2026-04-10 03:17:25 (6848): Preference change detected
2026-04-10 03:17:25 (6848): Setting CPU throttle for VM. (100%)
2026-04-10 03:17:25 (6848): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-10 03:28:43 (6848): VM state change detected. (old = 'running', new = 'paused')
2026-04-10 05:54:07 (6848): Preference change detected
2026-04-10 05:54:07 (6848): Setting CPU throttle for VM. (100%)
2026-04-10 05:54:07 (6848): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-10 05:54:08 (6848): Guest Log: 01:00:59.266345 timesync vgsvcTimeSyncWorker: Radical host time change: 8 730 341 000 000ns (HostNow=1 775 793 191 577 000 000 ns HostLast=1 775 784 461 236 000 000 ns)
2026-04-10 05:54:08 (6848): VM state change detected. (old = 'paused', new = 'running')
2026-04-10 05:54:18 (6848): Guest Log: 01:01:09.267475 timesync vgsvcTimeSyncWorker: Radical guest time change: 8 700 310 332 000ns (GuestNow=1 775 793 201 578 237 000 ns GuestLast=1 775 784 501 267 905 000 ns fSetTimeLastLoop=true )
2026-04-10 06:02:49 (6848): Preference change detected
2026-04-10 06:02:49 (6848): Setting CPU throttle for VM. (100%)
2026-04-10 06:02:49 (6848): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-10 06:04:00 (6848): Preference change detected
2026-04-10 06:04:00 (6848): Setting CPU throttle for VM. (100%)
2026-04-10 06:04:01 (6848): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-10 06:24:25 (6848): Guest Log:  *** Job finished ***
2026-04-10 06:24:25 (6848): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:17,353 | INFO     | all workflow threads have been joined
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:17,353 | INFO     | end of generic workflow (traces error code: 0)
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:17,354 | INFO     | traces error code: 0
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:17,354 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,091 | INFO     | PID=6088 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,092 | INFO     | found 0 job(s) in 20 queues
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,092 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,092 | INFO     | [monitor] control thread has ended
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,190 [wrapper] ==== pilot stdout END ====
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,193 [wrapper] ==== wrapper stdout RESUME ====
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,197 [wrapper] pilotpid: 6088
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,200 [wrapper] Pilot exit status: 0
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,245 [wrapper] pandaids: 7083279453
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,271 [wrapper] cleanup supervisor_pilot 25790 6089
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,276 [wrapper] Test setup, not cleaning
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,281 [wrapper] apfmon messages muted
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,285 [wrapper] ==== wrapper stdout END ====
2026-04-10 06:24:25 (6848): Guest Log: 2026-04-10 04:23:28,288 [wrapper] ==== wrapper stderr END ====
2026-04-10 06:24:25 (6848): Guest Log:  *** Error codes and diagnostics ***
2026-04-10 06:24:25 (6848): Guest Log:     "exeErrorCode": 0,
2026-04-10 06:24:25 (6848): Guest Log:     "pilotErrorCode": 0,
2026-04-10 06:24:25 (6848): Guest Log:  *** Listing of results directory ***
2026-04-10 06:24:25 (6848): Guest Log: total 194788
2026-04-10 06:24:25 (6848): Guest Log: -rwx------. 1 atlas atlas     36322 Apr  9 21:44 runpilot2-wrapper.sh
2026-04-10 06:24:25 (6848): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr  9 21:51 queuedata.json
2026-04-10 06:24:25 (6848): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr  9 21:52 pilot3.tar.gz
2026-04-10 06:24:25 (6848): Guest Log: -rwxr-xr-x. 1 atlas atlas      9387 Apr 10 00:27 init_data.xml
2026-04-10 06:24:25 (6848): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 10 00:27 start_atlas.sh
2026-04-10 06:24:25 (6848): Guest Log: -rwxr-xr-x. 1 atlas atlas    656932 Apr 10 00:27 input.tar.gz
2026-04-10 06:24:25 (6848): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 10 00:27 EVNT.49263206._000655.pool.root.1 -> /data/./ATLAS.root_0
2026-04-10 06:24:25 (6848): Guest Log: -rw-r--r--. 1 atlas atlas      2575 Apr 10 00:27 pandaJob.out
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas    997892 Apr 10 00:28 agis_schedconf.cvmfs.json
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas       431 Apr 10 00:28 workernode_map.json
2026-04-10 06:24:25 (6848): Guest Log: drwx------. 5 atlas atlas      4096 Apr 10 00:28 pilot3
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas 193774871 Apr 10 04:22 HITS.49263208._028677.pool.root.1
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas        97 Apr 10 04:22 pilot_heartbeat.json
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas      1027 Apr 10 04:22 memory_monitor_summary.json
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr 10 04:22 agis_ddmendpoints.agis.ALL.json
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas    332885 Apr 10 04:22 log.49263208._028677.job.log.tgz.1
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas      6365 Apr 10 04:22 heartbeat_new.json
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas      6256 Apr 10 04:22 heartbeat.json
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas       744 Apr 10 04:23 pilotlog.txt
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas    515607 Apr 10 04:23 log.49263208._028677.job.log.1
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas       357 Apr 10 04:23 output.list
2026-04-10 06:24:25 (6848): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 10 04:23 runtime_log
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas    870400 Apr 10 04:23 result.tar.gz
2026-04-10 06:24:25 (6848): Guest Log: -rw-r--r--. 1 atlas atlas      8383 Apr 10 04:23 runtime_log.err
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas       660 Apr 10 04:23 1dc5e0d53f2d.diag
2026-04-10 06:24:25 (6848): Guest Log: Looking for outputfile HITS.49263208._028677.pool.root.1
2026-04-10 06:24:25 (6848): Guest Log: HITS file was successfully produced
2026-04-10 06:24:25 (6848): Guest Log: -rw-------. 1 atlas atlas 193774871 Apr 10 04:22 /home/atlas/RunAtlas/HITS.49263208._028677.pool.root.1
2026-04-10 06:24:25 (6848): Guest Log: Successfully finished the ATLAS job!
2026-04-10 06:24:25 (6848): Guest Log: Copying the results back to the shared directory!
2026-04-10 06:24:25 (6848): Guest Log:  *** Contents of shared directory: ***
2026-04-10 06:24:25 (6848): Guest Log: total 410504
2026-04-10 06:24:25 (6848): Guest Log: -rwxrwxrwx. 1 root root 225016485 Apr 10 00:26 ATLAS.root_0
2026-04-10 06:24:25 (6848): Guest Log: -rwxrwxrwx. 1 root root 193774871 Apr 10  2026 HITS.pool.root.1
2026-04-10 06:24:25 (6848): Guest Log: -rwxrwxrwx. 1 root root      9387 Apr 10 00:26 init_data.xml
2026-04-10 06:24:25 (6848): Guest Log: -rwxrwxrwx. 1 root root    656932 Apr 10 00:02 input.tar.gz
2026-04-10 06:24:25 (6848): Guest Log: -rwxrwxrwx. 1 root root    870400 Apr 10  2026 result.tar.gz
2026-04-10 06:24:25 (6848): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 10 00:02 start_atlas.sh
2026-04-10 06:24:25 (6848): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-10 06:24:25 (6848): VM Completion File Detected.
2026-04-10 06:24:25 (6848): Powering off VM.
2026-04-10 06:24:25 (6848): Successfully stopped VM.
2026-04-10 06:24:25 (6848): Deregistering VM. (boinc_2c2ef32cea0ffe66, slot#8)
2026-04-10 06:24:25 (6848): Removing network bandwidth throttle group from VM.
2026-04-10 06:24:26 (6848): Removing VM from VirtualBox.
2026-04-10 06:24:31 (6848): called boinc_finish(0)

</stderr_txt>
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