Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-10 02:26:00 (6200): vboxwrapper version 26210
2026-04-10 02:26:00 (6200): BOINC client version: 7.22.2
2026-04-10 02:26:00 (6200): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-04-10 02:26:01 (6200): Successfully copied 'init_data.xml' to the shared directory.
2026-04-10 02:26:01 (6200): Create VM. (boinc_dbd5be77391c4935, slot#19)
2026-04-10 02:26:01 (6200): Setting Memory Size for VM. (4800MB)
2026-04-10 02:26:02 (6200): Setting CPU Count for VM. (8)
2026-04-10 02:26:02 (6200): Setting Chipset Options for VM.
2026-04-10 02:26:02 (6200): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-10 02:26:02 (6200): Setting Boot Options for VM.
2026-04-10 02:26:03 (6200): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-10 02:26:03 (6200): Enabling VM Network Access.
2026-04-10 02:26:03 (6200): Disabling USB Support for VM.
2026-04-10 02:26:04 (6200): Disabling COM Port Support for VM.
2026-04-10 02:26:04 (6200): Disabling LPT Port Support for VM.
2026-04-10 02:26:04 (6200): Disabling Audio Support for VM.
2026-04-10 02:26:04 (6200): Disabling Clipboard Support for VM.
2026-04-10 02:26:05 (6200): Disabling Drag and Drop Support for VM.
2026-04-10 02:26:05 (6200): Adding storage controller(s) to VM.
2026-04-10 02:26:05 (6200): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-10 02:26:07 (6200): Attempts: 2
2026-04-10 02:26:08 (6200): Adding VirtualBox Guest Additions to VM.
2026-04-10 02:26:08 (6200): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-10 02:26:08 (6200): forwarding host port 65168 to guest port 80
2026-04-10 02:26:09 (6200): Enabling remote desktop for VM.
2026-04-10 02:26:09 (6200): Required extension pack not installed, remote desktop not enabled.
2026-04-10 02:26:09 (6200): Enabling shared directory for VM.
2026-04-10 02:26:09 (6200): Starting VM using VBoxManage interface. (boinc_dbd5be77391c4935, slot#19)
2026-04-10 02:26:13 (6200): Successfully started VM. (PID = '3780')
2026-04-10 02:26:13 (6200): Reporting VM Process ID to BOINC.
2026-04-10 02:26:13 (6200): Guest Log: BIOS: VirtualBox 6.1.34
2026-04-10 02:26:13 (6200): Guest Log: CPUID EDX: 0x178bfbff
2026-04-10 02:26:13 (6200): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-10 02:26:13 (6200): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-10 02:26:13 (6200): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-10 02:26:13 (6200): Detected: Web Application Enabled (http://localhost:65168)
2026-04-10 02:26:13 (6200): Preference change detected
2026-04-10 02:26:13 (6200): Setting CPU throttle for VM. (100%)
2026-04-10 02:26:13 (6200): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-10 02:26:15 (6200): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-10 02:26:15 (6200): Guest Log: BIOS: Booting from Hard Disk...
2026-04-10 02:26:18 (6200): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-10 02:26:18 (6200): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-10 02:26:18 (6200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-10 02:26:24 (6200): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-10 02:26:24 (6200): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-04-10 02:26:29 (6200): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-10 02:26:29 (6200): Guest Log: 00:00:00.000103 main     Log opened 2026-04-10T02:26:27.467619000Z
2026-04-10 02:26:29 (6200): Guest Log: 00:00:00.000168 main     OS Product: Linux
2026-04-10 02:26:29 (6200): Guest Log: 00:00:00.000189 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-10 02:26:29 (6200): Guest Log: 00:00:00.000205 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-10 02:26:29 (6200): Guest Log: 00:00:00.000219 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-10 02:26:29 (6200): Guest Log: 00:00:00.000220 main     Process ID: 1370
2026-04-10 02:26:29 (6200): Guest Log: 00:00:00.000220 main     Package type: LINUX_64BITS_GENERIC
2026-04-10 02:26:29 (6200): Guest Log: 00:00:00.001099 main     5.2.32 r132073 started. Verbose level = 0
2026-04-10 02:26:29 (6200): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-10 02:26:29 (6200): Guest Log: [INFO] Mounting shared directory
2026-04-10 02:26:29 (6200): Guest Log: [INFO] Checking for init_data.xml
2026-04-10 02:26:39 (6200): Guest Log: 00:00:10.017629 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 115 526 000ns (GuestNow=1 775 780 798 354 788 000 ns GuestLast=1 775 787 987 470 314 000 ns fSetTimeLastLoop=true )
2026-04-10 02:27:27 (6200): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-10 02:27:27 (6200): Guest Log: [INFO] Detected branch: prod
2026-04-10 02:27:27 (6200): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-10 02:27:27 (6200): Guest Log: Copying input files
2026-04-10 02:27:28 (6200): Guest Log: Copied input files into RunAtlas.
2026-04-10 02:27:28 (6200): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-10 02:27:28 (6200): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-10 02:27:28 (6200): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-10 02:27:28 (6200): Guest Log: Further information can be found at the LHC@home message board.
2026-04-10 02:27:37 (6200): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-10 02:27:37 (6200): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-10 02:27:37 (6200): Guest Log: 2.6.3.0 1673 0 30196 158279 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-10 02:27:38 (6200): Guest Log: copied the webapp to /var/www
2026-04-10 02:27:38 (6200): Guest Log: ATHENA_PROC_NUMBER=8
2026-04-10 02:27:38 (6200): Guest Log: ATHENA_CORE_NUMBER=8
2026-04-10 02:27:38 (6200): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-10 02:27:38 (6200): Guest Log:  *** Starting ATLAS job. (PandaID=7083279197 taskID=49263208) ***
2026-04-10 03:17:25 (6200): Preference change detected
2026-04-10 03:17:25 (6200): Setting CPU throttle for VM. (100%)
2026-04-10 03:17:25 (6200): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-10 03:28:42 (6200): VM state change detected. (old = 'running', new = 'paused')
2026-04-10 06:22:18 (6200): Preference change detected
2026-04-10 06:22:18 (6200): Setting CPU throttle for VM. (100%)
2026-04-10 06:22:18 (6200): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-10 06:22:18 (6200): VM state change detected. (old = 'paused', new = 'running')
2026-04-10 06:22:26 (6200): Guest Log: 01:02:20.053446 timesync vgsvcTimeSyncWorker: Radical host time change: 10 421 486 000 000ns (HostNow=1 775 794 908 057 000 000 ns HostLast=1 775 784 486 571 000 000 ns)
2026-04-10 06:22:36 (6200): Guest Log: 01:02:30.054509 timesync vgsvcTimeSyncWorker: Radical guest time change: 10 389 667 742 000ns (GuestNow=1 775 794 918 058 218 000 ns GuestLast=1 775 784 528 390 476 000 ns fSetTimeLastLoop=true )
2026-04-10 06:53:08 (6200): Guest Log:  *** Job finished ***
2026-04-10 06:53:08 (6200): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:01,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:01,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:22,860 | INFO     | [monitor] cgroup control has ended
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:23,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140392071395136)>', '<ExcThread(monitor, started 140391768631040)>']
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:23,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:23,820 | INFO     | [monitor] control thread has ended
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:28,811 | INFO     | all workflow threads have been joined
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:28,812 | INFO     | end of generic workflow (traces error code: 0)
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:28,812 | INFO     | traces error code: 0
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:28,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:28,943 [wrapper] ==== pilot stdout END ====
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:28,951 [wrapper] ==== wrapper stdout RESUME ====
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:28,960 [wrapper] pilotpid: 6089
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:28,967 [wrapper] Pilot exit status: 0
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:29,027 [wrapper] pandaids: 7083279197
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:29,079 [wrapper] cleanup supervisor_pilot 25732 6090
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:29,085 [wrapper] Test setup, not cleaning
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:29,100 [wrapper] apfmon messages muted
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:29,108 [wrapper] ==== wrapper stdout END ====
2026-04-10 06:53:08 (6200): Guest Log: 2026-04-10 04:52:29,115 [wrapper] ==== wrapper stderr END ====
2026-04-10 06:53:08 (6200): Guest Log:  *** Error codes and diagnostics ***
2026-04-10 06:53:08 (6200): Guest Log:     "exeErrorCode": 0,
2026-04-10 06:53:08 (6200): Guest Log:     "pilotErrorCode": 0,
2026-04-10 06:53:08 (6200): Guest Log:  *** Listing of results directory ***
2026-04-10 06:53:08 (6200): Guest Log: total 192424
2026-04-10 06:53:08 (6200): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr  9 21:37 pilot3.tar.gz
2026-04-10 06:53:08 (6200): Guest Log: -rwx------. 1 atlas atlas     36322 Apr  9 21:44 runpilot2-wrapper.sh
2026-04-10 06:53:08 (6200): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr  9 21:51 queuedata.json
2026-04-10 06:53:08 (6200): Guest Log: -rwxr-xr-x. 1 atlas atlas    656930 Apr 10 00:27 input.tar.gz
2026-04-10 06:53:08 (6200): Guest Log: -rwxr-xr-x. 1 atlas atlas      9388 Apr 10 00:27 init_data.xml
2026-04-10 06:53:08 (6200): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 10 00:27 start_atlas.sh
2026-04-10 06:53:08 (6200): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 10 00:27 EVNT.49263206._000643.pool.root.1 -> /data/./ATLAS.root_0
2026-04-10 06:53:08 (6200): Guest Log: -rw-r--r--. 1 atlas atlas      2576 Apr 10 00:27 pandaJob.out
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas    997892 Apr 10 00:28 agis_schedconf.cvmfs.json
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas       431 Apr 10 00:28 workernode_map.json
2026-04-10 06:53:08 (6200): Guest Log: drwx------. 5 atlas atlas      4096 Apr 10 00:28 pilot3
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas 191393713 Apr 10 04:51 HITS.49263208._028422.pool.root.1
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas        98 Apr 10 04:51 pilot_heartbeat.json
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas      1026 Apr 10 04:51 memory_monitor_summary.json
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr 10 04:51 agis_ddmendpoints.agis.ALL.json
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas    311976 Apr 10 04:51 log.49263208._028422.job.log.tgz.1
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas      6360 Apr 10 04:51 heartbeat_new.json
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas      6251 Apr 10 04:51 heartbeat.json
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas      4874 Apr 10 04:52 pilotlog.txt
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas    515319 Apr 10 04:52 log.49263208._028422.job.log.1
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas       357 Apr 10 04:52 output.list
2026-04-10 06:53:08 (6200): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 10 04:52 runtime_log
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas    849920 Apr 10 04:52 result.tar.gz
2026-04-10 06:53:08 (6200): Guest Log: -rw-r--r--. 1 atlas atlas      8383 Apr 10 04:52 runtime_log.err
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas       659 Apr 10 04:52 1db4ea582460.diag
2026-04-10 06:53:08 (6200): Guest Log: Looking for outputfile HITS.49263208._028422.pool.root.1
2026-04-10 06:53:08 (6200): Guest Log: HITS file was successfully produced
2026-04-10 06:53:08 (6200): Guest Log: -rw-------. 1 atlas atlas 191393713 Apr 10 04:51 /home/atlas/RunAtlas/HITS.49263208._028422.pool.root.1
2026-04-10 06:53:09 (6200): Guest Log: Successfully finished the ATLAS job!
2026-04-10 06:53:09 (6200): Guest Log: Copying the results back to the shared directory!
2026-04-10 06:53:09 (6200): Guest Log:  *** Contents of shared directory: ***
2026-04-10 06:53:09 (6200): Guest Log: total 407396
2026-04-10 06:53:09 (6200): Guest Log: -rwxrwxrwx. 1 root root 224237473 Apr 10 00:26 ATLAS.root_0
2026-04-10 06:53:09 (6200): Guest Log: -rwxrwxrwx. 1 root root 191393713 Apr 10  2026 HITS.pool.root.1
2026-04-10 06:53:09 (6200): Guest Log: -rwxrwxrwx. 1 root root      9388 Apr 10 00:26 init_data.xml
2026-04-10 06:53:09 (6200): Guest Log: -rwxrwxrwx. 1 root root    656930 Apr 10 00:02 input.tar.gz
2026-04-10 06:53:09 (6200): Guest Log: -rwxrwxrwx. 1 root root    849920 Apr 10  2026 result.tar.gz
2026-04-10 06:53:09 (6200): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr 10 00:02 start_atlas.sh
2026-04-10 06:53:09 (6200): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-10 06:53:09 (6200): VM Completion File Detected.
2026-04-10 06:53:09 (6200): Powering off VM.
2026-04-10 06:53:10 (6200): Successfully stopped VM.
2026-04-10 06:53:10 (6200): Deregistering VM. (boinc_dbd5be77391c4935, slot#19)
2026-04-10 06:53:10 (6200): Removing network bandwidth throttle group from VM.
2026-04-10 06:53:11 (6200): Removing VM from VirtualBox.
2026-04-10 06:53:16 (6200): called boinc_finish(0)

</stderr_txt>
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