Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-10 12:44:38 (29976): vboxwrapper version 26210
2026-04-10 12:44:38 (29976): BOINC client version: 7.16.5
2026-04-10 12:44:38 (29976): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2026-04-10 12:44:38 (29976): Successfully copied 'init_data.xml' to the shared directory.
2026-04-10 12:44:39 (29976): Create VM. (boinc_7358c55339e3a237, slot#5)
2026-04-10 12:44:39 (29976): Setting Memory Size for VM. (4400MB)
2026-04-10 12:44:39 (29976): Setting CPU Count for VM. (4)
2026-04-10 12:44:40 (29976): Setting Chipset Options for VM.
2026-04-10 12:44:40 (29976): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-10 12:44:40 (29976): Setting Boot Options for VM.
2026-04-10 12:44:41 (29976): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-10 12:44:41 (29976): Enabling VM Network Access.
2026-04-10 12:44:41 (29976): Disabling USB Support for VM.
2026-04-10 12:44:41 (29976): Disabling COM Port Support for VM.
2026-04-10 12:44:42 (29976): Disabling LPT Port Support for VM.
2026-04-10 12:44:42 (29976): Disabling Audio Support for VM.
2026-04-10 12:44:42 (29976): Disabling Clipboard Support for VM.
2026-04-10 12:44:42 (29976): Disabling Drag and Drop Support for VM.
2026-04-10 12:44:43 (29976): Adding storage controller(s) to VM.
2026-04-10 12:44:43 (29976): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-10 12:44:43 (29976): Adding VirtualBox Guest Additions to VM.
2026-04-10 12:44:44 (29976): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-10 12:44:44 (29976): forwarding host port 55385 to guest port 80
2026-04-10 12:44:44 (29976): Enabling remote desktop for VM.
2026-04-10 12:44:45 (29976): Enabling shared directory for VM.
2026-04-10 12:44:45 (29976): Starting VM using VBoxManage interface. (boinc_7358c55339e3a237, slot#5)
2026-04-10 12:44:49 (29976): Successfully started VM. (PID = '19480')
2026-04-10 12:44:49 (29976): Reporting VM Process ID to BOINC.
2026-04-10 12:44:49 (29976): Guest Log: BIOS: VirtualBox 5.2.44
2026-04-10 12:44:49 (29976): Guest Log: CPUID EDX: 0x178bfbff
2026-04-10 12:44:49 (29976): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-10 12:44:49 (29976): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-10 12:44:49 (29976): Detected: Web Application Enabled (http://localhost:55385)
2026-04-10 12:44:49 (29976): Detected: Remote Desktop Enabled (localhost:55386)
2026-04-10 12:44:49 (29976): Preference change detected
2026-04-10 12:44:49 (29976): Setting CPU throttle for VM. (100%)
2026-04-10 12:44:49 (29976): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-10 12:44:51 (29976): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-10 12:44:51 (29976): Guest Log: BIOS: Booting from Hard Disk...
2026-04-10 12:44:54 (29976): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-10 12:44:54 (29976): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-10 12:44:54 (29976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-10 12:45:00 (29976): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-10 12:45:00 (29976): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-04-10 12:45:05 (29976): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-10 12:45:05 (29976): Guest Log: 00:00:00.000149 main     Log opened 2026-04-10T12:45:03.974912000Z
2026-04-10 12:45:05 (29976): Guest Log: 00:00:00.000245 main     OS Product: Linux
2026-04-10 12:45:05 (29976): Guest Log: 00:00:00.000269 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-10 12:45:05 (29976): Guest Log: 00:00:00.000289 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-10 12:45:05 (29976): Guest Log: 00:00:00.000316 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-10 12:45:05 (29976): Guest Log: 00:00:00.000316 main     Process ID: 1320
2026-04-10 12:45:05 (29976): Guest Log: 00:00:00.000317 main     Package type: LINUX_64BITS_GENERIC
2026-04-10 12:45:05 (29976): Guest Log: 00:00:00.001216 main     5.2.32 r132073 started. Verbose level = 0
2026-04-10 12:45:05 (29976): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-10 12:45:05 (29976): Guest Log: [INFO] Mounting shared directory
2026-04-10 12:45:05 (29976): Guest Log: [INFO] Checking for init_data.xml
2026-04-10 12:45:12 (29976): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-10 12:45:12 (29976): Guest Log: [INFO] Detected branch: prod
2026-04-10 12:45:12 (29976): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-10 12:45:12 (29976): Guest Log: Copying input files
2026-04-10 12:45:13 (29976): Guest Log: Copied input files into RunAtlas.
2026-04-10 12:45:13 (29976): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-10 12:45:13 (29976): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-10 12:45:13 (29976): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-10 12:45:13 (29976): Guest Log: Further information can be found at the LHC@home message board.
2026-04-10 12:45:15 (29976): Guest Log: 00:00:10.109815 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 497 936 000ns (GuestNow=1 775 814 315 480 985 000 ns GuestLast=1 775 825 103 978 921 000 ns fSetTimeLastLoop=true )
2026-04-10 12:45:21 (29976): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-10 12:45:21 (29976): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-10 12:45:21 (29976): Guest Log: 2.6.3.0 1597 0 30164 158293 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-10 12:45:22 (29976): Guest Log: copied the webapp to /var/www
2026-04-10 12:45:22 (29976): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-10 12:45:22 (29976): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-10 12:45:22 (29976): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-10 12:45:22 (29976): Guest Log:  *** Starting ATLAS job. (PandaID=7083284904 taskID=49263191) ***
2026-04-10 14:24:52 (29976): Status Report: Elapsed Time: '6000.000000'
2026-04-10 14:24:52 (29976): Status Report: CPU Time: '21372.734375'
2026-04-10 16:04:55 (29976): Status Report: Elapsed Time: '12000.000000'
2026-04-10 16:04:55 (29976): Status Report: CPU Time: '44024.765625'
2026-04-10 16:05:30 (29976): Guest Log:  *** Job finished ***
2026-04-10 16:05:30 (29976): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:04:25,829 | INFO     | [data] copytool_out thread has finished
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:04:27,496 | INFO     | [data] queue_monitor thread has finished
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:22,737 | INFO     | [monitor] cgroup control has ended
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:22,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140064760317760)>', '<ExcThread(monitor, started 140064159942400)>']
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:23,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:23,043 | INFO     | [monitor] control thread has ended
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:27,741 | INFO     | all workflow threads have been joined
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:27,741 | INFO     | end of generic workflow (traces error code: 0)
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:27,741 | INFO     | traces error code: 0
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:27,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:27,842 [wrapper] ==== pilot stdout END ====
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:27,846 [wrapper] ==== wrapper stdout RESUME ====
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:27,851 [wrapper] pilotpid: 5983
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:27,856 [wrapper] Pilot exit status: 0
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:27,903 [wrapper] pandaids: 7083284904
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:27,936 [wrapper] cleanup supervisor_pilot 27173 5984
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:27,941 [wrapper] Test setup, not cleaning
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:27,945 [wrapper] apfmon messages muted
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:27,950 [wrapper] ==== wrapper stdout END ====
2026-04-10 16:05:30 (29976): Guest Log: 2026-04-10 13:05:27,955 [wrapper] ==== wrapper stderr END ====
2026-04-10 16:05:30 (29976): Guest Log:  *** Error codes and diagnostics ***
2026-04-10 16:05:30 (29976): Guest Log:     "exeErrorCode": 0,
2026-04-10 16:05:30 (29976): Guest Log:     "pilotErrorCode": 0,
2026-04-10 16:05:30 (29976): Guest Log:  *** Listing of results directory ***
2026-04-10 16:05:30 (29976): Guest Log: total 202228
2026-04-10 16:05:30 (29976): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr  9 21:37 pilot3.tar.gz
2026-04-10 16:05:30 (29976): Guest Log: -rwx------. 1 atlas atlas     36322 Apr  9 21:40 runpilot2-wrapper.sh
2026-04-10 16:05:30 (29976): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr  9 21:42 queuedata.json
2026-04-10 16:05:30 (29976): Guest Log: -rwxr-xr-x. 1 atlas atlas      8815 Apr 10 09:45 init_data.xml
2026-04-10 16:05:30 (29976): Guest Log: -rwxr-xr-x. 1 atlas atlas    656927 Apr 10 09:45 input.tar.gz
2026-04-10 16:05:30 (29976): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 10 09:45 start_atlas.sh
2026-04-10 16:05:30 (29976): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 10 09:45 EVNT.49263189._000207.pool.root.1 -> /data/./ATLAS.root_0
2026-04-10 16:05:30 (29976): Guest Log: -rw-r--r--. 1 atlas atlas      2575 Apr 10 09:45 pandaJob.out
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas    997884 Apr 10 09:46 agis_schedconf.cvmfs.json
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas       426 Apr 10 09:46 workernode_map.json
2026-04-10 16:05:30 (29976): Guest Log: drwx------. 5 atlas atlas      4096 Apr 10 09:46 pilot3
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas        95 Apr 10 13:03 pilot_heartbeat.json
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas 200263890 Apr 10 13:03 HITS.49263191._033272.pool.root.1
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas      1031 Apr 10 13:04 memory_monitor_summary.json
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr 10 13:04 agis_ddmendpoints.agis.ALL.json
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas    322604 Apr 10 13:04 log.49263191._033272.job.log.tgz.1
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas      6391 Apr 10 13:04 heartbeat_new.json
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas      6282 Apr 10 13:04 heartbeat.json
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas      4793 Apr 10 13:05 pilotlog.txt
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas   1092522 Apr 10 13:05 log.49263191._033272.job.log.1
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas       357 Apr 10 13:05 output.list
2026-04-10 16:05:30 (29976): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 10 13:05 runtime_log
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas   1433600 Apr 10 13:05 result.tar.gz
2026-04-10 16:05:30 (29976): Guest Log: -rw-r--r--. 1 atlas atlas      8410 Apr 10 13:05 runtime_log.err
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas       670 Apr 10 13:05 1cdbf33e1bbb.diag
2026-04-10 16:05:30 (29976): Guest Log: Looking for outputfile HITS.49263191._033272.pool.root.1
2026-04-10 16:05:30 (29976): Guest Log: HITS file was successfully produced
2026-04-10 16:05:30 (29976): Guest Log: -rw-------. 1 atlas atlas 200263890 Apr 10 13:03 /home/atlas/RunAtlas/HITS.49263191._033272.pool.root.1
2026-04-10 16:05:31 (29976): Guest Log: Successfully finished the ATLAS job!
2026-04-10 16:05:31 (29976): Guest Log: Copying the results back to the shared directory!
2026-04-10 16:05:31 (29976): Guest Log:  *** Contents of shared directory: ***
2026-04-10 16:05:31 (29976): Guest Log: total 416072
2026-04-10 16:05:31 (29976): Guest Log: -rwxrwxrwx. 1 root root 223667387 Apr 10 09:44 ATLAS.root_0
2026-04-10 16:05:31 (29976): Guest Log: -rwxrwxrwx. 1 root root 200263890 Apr 10 13:05 HITS.pool.root.1
2026-04-10 16:05:31 (29976): Guest Log: -rwxrwxrwx. 1 root root      8815 Apr 10 09:44 init_data.xml
2026-04-10 16:05:31 (29976): Guest Log: -rwxrwxrwx. 1 root root    656927 Apr  9 22:55 input.tar.gz
2026-04-10 16:05:31 (29976): Guest Log: -rwxrwxrwx. 1 root root   1433600 Apr 10 13:05 result.tar.gz
2026-04-10 16:05:31 (29976): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr  9 22:55 start_atlas.sh
2026-04-10 16:05:31 (29976): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-10 16:05:32 (29976): VM Completion File Detected.
2026-04-10 16:05:32 (29976): Powering off VM.
2026-04-10 16:05:32 (29976): Successfully stopped VM.
2026-04-10 16:05:32 (29976): Deregistering VM. (boinc_7358c55339e3a237, slot#5)
2026-04-10 16:05:32 (29976): Removing network bandwidth throttle group from VM.
2026-04-10 16:05:33 (29976): Removing VM from VirtualBox.
2026-04-10 16:05:38 (29976): called boinc_finish(0)

</stderr_txt>
]]>

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