Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:14:54 (1358350): wrapper (7.7.26015): starting
01:14:54 (1358350): wrapper: running run_atlas (--nthreads 4)
[2026-04-12 01:14:54] Arguments: --nthreads 4
[2026-04-12 01:14:54] Threads: 4
[2026-04-12 01:14:54] Checking for CVMFS
[2026-04-12 01:14:54] No cvmfs_config command found, will try listing directly
[2026-04-12 01:14:54] CVMFS is ok
[2026-04-12 01:14:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-12 01:14:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-12 01:14:54] Further information can be found at the LHC@home message board.
[2026-04-12 01:14:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-12 01:14:54] Checking for apptainer binary...
[2026-04-12 01:14:54] which: no apptainer in ((null))
[2026-04-12 01:14:54] apptainer is not installed, using version from CVMFS
[2026-04-12 01:14:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-12 01:14:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/24/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-04-12 01:14:55] apptainer works
[2026-04-12 01:14:55] Set ATHENA_PROC_NUMBER=4
[2026-04-12 01:14:55] Set ATHENA_CORE_NUMBER=4
[2026-04-12 01:14:55] Starting ATLAS job with PandaID=7083277822
[2026-04-12 01:14:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-12 04:04:49]  *** The last 200 lines of the pilot log: ***
[2026-04-12 04:04:49] 2026-04-12 02:03:43,693 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-12 04:04:49] 2026-04-12 02:03:44,742 | INFO     | PID=1363333 has CPU usage=24.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-12 04:04:49] 2026-04-12 02:03:44,743 | INFO     | .. there are 21 such processes running
[2026-04-12 04:04:49] 2026-04-12 02:03:46,007 | INFO     | job 7083277822 has state=finished
[2026-04-12 04:04:49] 2026-04-12 02:03:46,008 | INFO     | preparing for final server update for job 7083277822 in state='finished'
[2026-04-12 04:04:49] 2026-04-12 02:03:46,008 | INFO     | reading metadata from: /var/lib/boinc/var/slot100/slots/24/PanDA_Pilot-7083277822/jobReport.json
[2026-04-12 04:04:49] 2026-04-12 02:03:46,010 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot100/slots/24/workernode_map.json
[2026-04-12 04:04:49] 2026-04-12 02:03:46,011 | INFO     | this job has now completed (state=finished)
[2026-04-12 04:04:49] 2026-04-12 02:03:46,011 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-12 04:04:49] 2026-04-12 02:03:46,011 | INFO     | log transfer has been attempted: DONE
[2026-04-12 04:04:49] 2026-04-12 02:03:46,011 | INFO     | job 7083277822 has finished - writing final server update
[2026-04-12 04:04:49] 2026-04-12 02:03:46,012 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3399572/.job.ad'
[2026-04-12 04:04:49] 2026-04-12 02:03:46,012 | INFO     | total number of processed events: 400 (read)
[2026-04-12 04:04:49] 2026-04-12 02:03:46,037 | INFO     | using path: /var/lib/boinc/var/slot100/slots/24/PanDA_Pilot-7083277822/memory_monitor_summary.json (trf name=prmon)
[2026-04-12 04:04:49] 2026-04-12 02:03:46,037 | INFO     | extracted standard info from prmon json
[2026-04-12 04:04:49] 2026-04-12 02:03:46,037 | INFO     | extracted standard memory fields from prmon json
[2026-04-12 04:04:49] 2026-04-12 02:03:46,037 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-12 04:04:49] 2026-04-12 02:03:46,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-12 04:04:49] 2026-04-12 02:03:46,041 | INFO     | fitting pss+swap vs Time
[2026-04-12 04:04:49] 2026-04-12 02:03:46,044 | INFO     | sum of square deviations: 1392881930.0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,045 | INFO     | sum of deviations: -18430004297.999996
[2026-04-12 04:04:49] 2026-04-12 02:03:46,045 | INFO     | mean x (centered): 0.0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,045 | INFO     | mean y: 2376679.16969697
[2026-04-12 04:04:49] 2026-04-12 02:03:46,045 | INFO     | intersect: 2376679.16969697
[2026-04-12 04:04:49] 2026-04-12 02:03:46,046 | INFO     | chi2: 1.4418260822423248
[2026-04-12 04:04:49] 2026-04-12 02:03:46,046 | INFO     | sum of square deviations: 1270051720.0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,047 | INFO     | sum of deviations: -17453105096.999996
[2026-04-12 04:04:49] 2026-04-12 02:03:46,047 | INFO     | mean x (centered): 0.0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,047 | INFO     | mean y: 2377892.4
[2026-04-12 04:04:49] 2026-04-12 02:03:46,047 | INFO     | intersect: 2377892.4
[2026-04-12 04:04:49] 2026-04-12 02:03:46,048 | INFO     | chi2: 1.4392604423465636
[2026-04-12 04:04:49] 2026-04-12 02:03:46,048 | INFO     | current chi2=1.4392604423465636 (change=0.17794378443835046 %)
[2026-04-12 04:04:49] 2026-04-12 02:03:46,048 | INFO     | right removable region: 159
[2026-04-12 04:04:49] 2026-04-12 02:03:46,048 | INFO     | sum of square deviations: 1270051720.0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,049 | INFO     | sum of deviations: -36845002626.49999
[2026-04-12 04:04:49] 2026-04-12 02:03:46,049 | INFO     | mean x (centered): 0.0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,049 | INFO     | mean y: 2399077.14375
[2026-04-12 04:04:49] 2026-04-12 02:03:46,049 | INFO     | intersect: 2399077.14375
[2026-04-12 04:04:49] 2026-04-12 02:03:46,050 | INFO     | chi2: 0.11284481744428104
[2026-04-12 04:04:49] 2026-04-12 02:03:46,050 | INFO     | current chi2=0.11284481744428104 (change=92.1734792542534 %)
[2026-04-12 04:04:49] 2026-04-12 02:03:46,050 | INFO     | sum of square deviations: 1154663510.0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,051 | INFO     | sum of deviations: -31090183235.000004
[2026-04-12 04:04:49] 2026-04-12 02:03:46,051 | INFO     | mean x (centered): 0.0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,051 | INFO     | mean y: 2391433.316129032
[2026-04-12 04:04:49] 2026-04-12 02:03:46,051 | INFO     | intersect: 2391433.316129032
[2026-04-12 04:04:49] 2026-04-12 02:03:46,052 | INFO     | chi2: 0.09968528564044303
[2026-04-12 04:04:49] 2026-04-12 02:03:46,052 | INFO     | current chi2=0.09968528564044303 (change=11.661618231015124 %)
[2026-04-12 04:04:49] 2026-04-12 02:03:46,052 | INFO     | left removable region: 10
[2026-04-12 04:04:49] 2026-04-12 02:03:46,052 | INFO     | sum of square deviations: 1025693650.0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,053 | INFO     | sum of deviations: -29570213844.0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,053 | INFO     | mean x (centered): 0.0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,053 | INFO     | mean y: 2393591.147651007
[2026-04-12 04:04:49] 2026-04-12 02:03:46,053 | INFO     | intersect: 2393591.147651007
[2026-04-12 04:04:49] 2026-04-12 02:03:46,054 | INFO     | chi2: 0.09403695831284666
[2026-04-12 04:04:49] 2026-04-12 02:03:46,054 | INFO     | current memory leak: -28.83 B/s (using 149 data points, chi2=0.09)
[2026-04-12 04:04:49] 2026-04-12 02:03:46,055 | INFO     | could have reported an average CPU frequency of 2680 MHz (9 samples)
[2026-04-12 04:04:49] 2026-04-12 02:03:46,055 | INFO     | ..............................
[2026-04-12 04:04:49] 2026-04-12 02:03:46,055 | INFO     | . Timing measurements:
[2026-04-12 04:04:49] 2026-04-12 02:03:46,055 | INFO     | . get job = 0 s
[2026-04-12 04:04:49] 2026-04-12 02:03:46,055 | INFO     | . initial setup = 10 s
[2026-04-12 04:04:49] 2026-04-12 02:03:46,055 | INFO     | . payload setup = 19 s
[2026-04-12 04:04:49] 2026-04-12 02:03:46,055 | INFO     | . stage-in = 0 s
[2026-04-12 04:04:49] 2026-04-12 02:03:46,055 | INFO     | . payload execution = 10058 s
[2026-04-12 04:04:49] 2026-04-12 02:03:46,056 | INFO     | . stage-out = 0 s
[2026-04-12 04:04:49] 2026-04-12 02:03:46,056 | INFO     | . log creation = 0 s
[2026-04-12 04:04:49] 2026-04-12 02:03:46,056 | INFO     | ..............................
[2026-04-12 04:04:49] 2026-04-12 02:03:46,149 | INFO     | 
[2026-04-12 04:04:49] 2026-04-12 02:03:46,149 | INFO     | job summary report
[2026-04-12 04:04:49] 2026-04-12 02:03:46,149 | INFO     | --------------------------------------------------
[2026-04-12 04:04:49] 2026-04-12 02:03:46,149 | INFO     | PanDA job id: 7083277822
[2026-04-12 04:04:49] 2026-04-12 02:03:46,149 | INFO     | task id: 49263208
[2026-04-12 04:04:49] 2026-04-12 02:03:46,149 | INFO     | errors: (none)
[2026-04-12 04:04:49] 2026-04-12 02:03:46,149 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-12 04:04:49] 2026-04-12 02:03:46,150 | INFO     | pilot state: finished 
[2026-04-12 04:04:49] 2026-04-12 02:03:46,150 | INFO     | transexitcode: 0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,153 | INFO     | exeerrorcode: 0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,153 | INFO     | exeerrordiag: 
[2026-04-12 04:04:49] 2026-04-12 02:03:46,153 | INFO     | exitcode: 0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,153 | INFO     | exitmsg: OK
[2026-04-12 04:04:49] 2026-04-12 02:03:46,153 | INFO     | cpuconsumptiontime: 37951 s
[2026-04-12 04:04:49] 2026-04-12 02:03:46,153 | INFO     | nevents: 400
[2026-04-12 04:04:49] 2026-04-12 02:03:46,153 | INFO     | neventsw: 0
[2026-04-12 04:04:49] 2026-04-12 02:03:46,153 | INFO     | pid: 1368760
[2026-04-12 04:04:49] 2026-04-12 02:03:46,153 | INFO     | pgrp: 1368760
[2026-04-12 04:04:49] 2026-04-12 02:03:46,153 | INFO     | corecount: 4
[2026-04-12 04:04:49] 2026-04-12 02:03:46,153 | INFO     | event service: False
[2026-04-12 04:04:49] 2026-04-12 02:03:46,153 | INFO     | sizes: {0: 2279680, 1: 2281509, 12: 2281509, 10081: 2310710, 10083: 2319734, 10085: 2319790, 10087: 2320176}
[2026-04-12 04:04:49] 2026-04-12 02:03:46,154 | INFO     | --------------------------------------------------
[2026-04-12 04:04:49] 2026-04-12 02:03:46,154 | INFO     | 
[2026-04-12 04:04:49] 2026-04-12 02:03:46,154 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/24
[2026-04-12 04:04:49] 2026-04-12 02:03:46,188 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,189 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,189 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,189 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,189 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,189 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,189 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,190 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-12 04:04:49] 2026-04-12 02:03:46,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,191 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-12 04:04:49] 2026-04-12 02:03:46,191 | INFO     | job 7083277822 has completed (purged errors)
[2026-04-12 04:04:49] 2026-04-12 02:03:46,191 | INFO     | overall cleanup function is called
[2026-04-12 04:04:49] 2026-04-12 02:03:47,200 | INFO     | --- collectZombieJob: --- 10, [1368760]
[2026-04-12 04:04:49] 2026-04-12 02:03:47,200 | INFO     | zombie collector waiting for pid 1368760
[2026-04-12 04:04:49] 2026-04-12 02:03:47,200 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-12 04:04:49] 2026-04-12 02:03:47,201 | INFO     | collected zombie processes
[2026-04-12 04:04:49] 2026-04-12 02:03:47,201 | INFO     | will attempt to kill all subprocesses of pid=1368760
[2026-04-12 04:04:49] 2026-04-12 02:03:48,033 | INFO     | process IDs to be killed: [1368760] (in reverse order)
[2026-04-12 04:04:49] 2026-04-12 02:03:48,369 | WARNING  | found no corresponding commands to process id(s)
[2026-04-12 04:04:49] 2026-04-12 02:03:48,369 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-12 04:04:49] 2026-04-12 02:03:48,399 | INFO     | did not find any defunct processes belonging to 1368760
[2026-04-12 04:04:49] 2026-04-12 02:03:48,427 | INFO     | did not find any defunct processes belonging to 1368760
[2026-04-12 04:04:49] 2026-04-12 02:03:48,427 | INFO     | Ready for new job
[2026-04-12 04:04:49] 2026-04-12 02:03:48,430 | INFO     | **************************************
[2026-04-12 04:04:49] 2026-04-12 02:03:48,430 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-12 04:04:49] 2026-04-12 02:03:48,430 | INFO     | **************************************
[2026-04-12 04:04:49] 2026-04-12 02:03:48,430 | INFO     | 
[2026-04-12 04:04:49] 2026-04-12 02:03:48,438 | INFO     | architecture information:
[2026-04-12 04:04:49] 2026-04-12 02:03:48,439 | INFO     | executing command: cat /etc/os-release
[2026-04-12 04:04:49] 2026-04-12 02:03:48,463 | INFO     | cat /etc/os-release:
[2026-04-12 04:04:49] NAME="CentOS Linux"
[2026-04-12 04:04:49] VERSION="7 (Core)"
[2026-04-12 04:04:49] ID="centos"
[2026-04-12 04:04:49] ID_LIKE="rhel fedora"
[2026-04-12 04:04:49] VERSION_ID="7"
[2026-04-12 04:04:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-12 04:04:49] ANSI_COLOR="0;31"
[2026-04-12 04:04:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-12 04:04:49] HOME_URL="https://www.centos.org/"
[2026-04-12 04:04:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-12 04:04:49] 
[2026-04-12 04:04:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-12 04:04:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-12 04:04:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-12 04:04:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-12 04:04:49] 
[2026-04-12 04:04:49] 2026-04-12 02:03:48,464 | INFO     | **************************************
[2026-04-12 04:04:49] 2026-04-12 02:03:48,967 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/24
[2026-04-12 04:04:49] 2026-04-12 02:03:48,996 | INFO     | sufficient remaining disk space (243253903360 B)
[2026-04-12 04:04:49] 2026-04-12 02:03:48,997 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-12 04:04:49] 2026-04-12 02:03:48,997 | INFO     | current server update state: UPDATING_FINAL
[2026-04-12 04:04:49] 2026-04-12 02:03:48,997 | INFO     | update_server=False
[2026-04-12 04:04:49] 2026-04-12 02:03:48,997 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-12 04:04:49] 2026-04-12 02:03:49,073 | INFO     | all payload control threads have been joined
[2026-04-12 04:04:49] 2026-04-12 02:03:49,092 | INFO     | all data control threads have been joined
[2026-04-12 04:04:49] 2026-04-12 02:03:49,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-12 04:04:49] 2026-04-12 02:03:49,649 | INFO     | aborting loop
[2026-04-12 04:04:49] 2026-04-12 02:03:49,654 | INFO     | all job control threads have been joined
[2026-04-12 04:04:49] 2026-04-12 02:03:49,801 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-12 04:04:49] 2026-04-12 02:03:50,002 | INFO     | [job] retrieve thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:50,079 | INFO     | [payload] control thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:50,098 | INFO     | [data] control thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:50,171 | INFO     | [payload] execute_payloads thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:50,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-12 04:04:49] 2026-04-12 02:03:50,339 | INFO     | [data] copytool_in thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:50,548 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:50,633 | INFO     | [payload] failed_post thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:50,654 | INFO     | [job] job monitor thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:50,660 | INFO     | [job] control thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:50,837 | INFO     | [job] validate thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:50,860 | INFO     | [job] create_data_payload thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:50,923 | INFO     | [payload] validate_pre thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:51,021 | INFO     | [payload] validate_post thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:51,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-12 04:04:49] 2026-04-12 02:03:52,165 | INFO     | [job] queue monitor thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:52,293 | INFO     | [data] copytool_out thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:03:53,810 | INFO     | [data] queue_monitor thread has finished
[2026-04-12 04:04:49] 2026-04-12 02:04:19,795 | INFO     | PID=1363333 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-12 04:04:49] 2026-04-12 02:04:19,796 | INFO     | .. there are 21 such processes running
[2026-04-12 04:04:49] 2026-04-12 02:04:19,797 | INFO     | found 0 job(s) in 20 queues
[2026-04-12 04:04:49] 2026-04-12 02:04:19,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-12 04:04:49] 2026-04-12 02:04:19,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-12 04:04:49] 2026-04-12 02:04:43,343 | INFO     | [monitor] cgroup control has ended
[2026-04-12 04:04:49] 2026-04-12 02:04:43,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22439904716608)>', '<ExcThread(monitor, started 22439666136832)>']
[2026-04-12 04:04:49] 2026-04-12 02:04:43,913 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-12 04:04:49] 2026-04-12 02:04:43,913 | INFO     | [monitor] control thread has ended
[2026-04-12 04:04:49] 2026-04-12 02:04:48,532 | INFO     | all workflow threads have been joined
[2026-04-12 04:04:49] 2026-04-12 02:04:48,532 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-12 04:04:49] 2026-04-12 02:04:48,533 | INFO     | traces error code: 0
[2026-04-12 04:04:49] 2026-04-12 02:04:48,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-12 04:04:49] 2026-04-12 02:04:48,673 [wrapper] ==== pilot stdout END ====
[2026-04-12 04:04:49] 2026-04-12 02:04:48,678 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-12 04:04:49] 2026-04-12 02:04:48,681 [wrapper] pilotpid: 1363333
[2026-04-12 04:04:49] 2026-04-12 02:04:48,686 [wrapper] Pilot exit status: 0
[2026-04-12 04:04:49] 2026-04-12 02:04:48,705 [wrapper] pandaids: 7083277822
[2026-04-12 04:04:49] 2026-04-12 02:04:48,914 [wrapper] cleanup supervisor_pilot 1712831 1363334
[2026-04-12 04:04:49] 2026-04-12 02:04:48,921 [wrapper] Test setup, not cleaning
[2026-04-12 04:04:49] 2026-04-12 02:04:48,927 [wrapper] apfmon messages muted
[2026-04-12 04:04:49] 2026-04-12 02:04:48,931 [wrapper] ==== wrapper stdout END ====
[2026-04-12 04:04:49] 2026-04-12 02:04:48,935 [wrapper] ==== wrapper stderr END ====
[2026-04-12 04:04:49]  *** Error codes and diagnostics ***
[2026-04-12 04:04:49]     "exeErrorCode": 0,
[2026-04-12 04:04:49]     "pilotErrorCode": 0,
[2026-04-12 04:04:49]  *** Listing of results directory ***
[2026-04-12 04:04:49] total 412484
[2026-04-12 04:04:49] -rwx------. 1 boinc boinc     36322 Apr  9 23:02 runpilot2-wrapper.sh
[2026-04-12 04:04:49] -rw-r--r--. 1 boinc boinc    644190 Apr  9 23:06 pilot3.tar.gz
[2026-04-12 04:04:49] -rw-r--r--. 1 boinc boinc      5094 Apr  9 23:15 queuedata.json
[2026-04-12 04:04:49] -rw-r--r--. 1 boinc boinc       100 Apr 12 01:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-12 04:04:49] -rwxr-xr-x. 1 boinc boinc      7986 Apr 12 01:14 run_atlas
[2026-04-12 04:04:49] -rw-r--r--. 1 boinc boinc       105 Apr 12 01:14 job.xml
[2026-04-12 04:04:49] -rw-r--r--. 2 boinc boinc 224650179 Apr 12 01:14 EVNT.49263206._000596.pool.root.1
[2026-04-12 04:04:49] -rw-r--r--. 1 boinc boinc      6615 Apr 12 01:14 init_data.xml
[2026-04-12 04:04:49] -rw-r--r--. 2 boinc boinc     15665 Apr 12 01:14 start_atlas.sh
[2026-04-12 04:04:49] drwxrwx--x. 2 boinc boinc      4096 Apr 12 01:14 shared
[2026-04-12 04:04:49] -rw-r--r--. 2 boinc boinc    656930 Apr 12 01:14 input.tar.gz
[2026-04-12 04:04:49] -rw-r--r--. 1 boinc boinc         0 Apr 12 01:14 boinc_lockfile
[2026-04-12 04:04:49] -rw-r--r--. 1 boinc boinc      2575 Apr 12 01:14 pandaJob.out
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc    997759 Apr 12 01:15 agis_schedconf.cvmfs.json
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc   1511579 Apr 12 01:15 agis_ddmendpoints.agis.ALL.json
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc       444 Apr 12 01:15 workernode_map.json
[2026-04-12 04:04:49] drwx------. 5 boinc boinc      4096 Apr 12 01:15 pilot3
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc 191229622 Apr 12 04:03 HITS.49263208._027355.pool.root.1
[2026-04-12 04:04:49] -rw-r--r--. 1 boinc boinc       487 Apr 12 04:03 boinc_task_state.xml
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc      1029 Apr 12 04:03 memory_monitor_summary.json
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc    288245 Apr 12 04:03 log.49263208._027355.job.log.tgz.1
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc      6386 Apr 12 04:03 heartbeat_new.json
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc      6277 Apr 12 04:03 heartbeat.json
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc        95 Apr 12 04:04 pilot_heartbeat.json
[2026-04-12 04:04:49] -rw-r--r--. 1 boinc boinc      8192 Apr 12 04:04 boinc_mmap_file
[2026-04-12 04:04:49] -rw-r--r--. 1 boinc boinc        27 Apr 12 04:04 wrapper_checkpoint.txt
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc      4831 Apr 12 04:04 pilotlog.txt
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc    930647 Apr 12 04:04 log.49263208._027355.job.log.1
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc       357 Apr 12 04:04 output.list
[2026-04-12 04:04:49] -rw-r--r--. 1 boinc boinc       410 Apr 12 04:04 runtime_log
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc   1239040 Apr 12 04:04 result.tar.gz
[2026-04-12 04:04:49] -rw-r--r--. 1 boinc boinc      8861 Apr 12 04:04 runtime_log.err
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc       666 Apr 12 04:04 13ed6db17fca.diag
[2026-04-12 04:04:49] -rw-r--r--. 1 boinc boinc     21157 Apr 12 04:04 stderr.txt
[2026-04-12 04:04:49] HITS file was successfully produced:
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc 191229622 Apr 12 04:03 shared/HITS.pool.root.1
[2026-04-12 04:04:49]  *** Contents of shared directory: ***
[2026-04-12 04:04:49] total 408016
[2026-04-12 04:04:49] -rw-r--r--. 2 boinc boinc 224650179 Apr 12 01:14 ATLAS.root_0
[2026-04-12 04:04:49] -rw-r--r--. 2 boinc boinc     15665 Apr 12 01:14 start_atlas.sh
[2026-04-12 04:04:49] -rw-r--r--. 2 boinc boinc    656930 Apr 12 01:14 input.tar.gz
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc 191229622 Apr 12 04:03 HITS.pool.root.1
[2026-04-12 04:04:49] -rw-------. 1 boinc boinc   1239040 Apr 12 04:04 result.tar.gz
04:04:50 (1358350): run_atlas exited; CPU time 38587.213998
04:04:50 (1358350): called boinc_finish(0)

</stderr_txt>
]]>

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