Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:39:26 (4086006): wrapper (7.7.26015): starting
20:39:26 (4086006): wrapper: running run_atlas (--nthreads 4)
[2026-04-10 20:39:26] Arguments: --nthreads 4
[2026-04-10 20:39:26] Threads: 4
[2026-04-10 20:39:26] Checking for CVMFS
[2026-04-10 20:39:26] No cvmfs_config command found, will try listing directly
[2026-04-10 20:39:26] CVMFS is ok
[2026-04-10 20:39:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-10 20:39:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-10 20:39:26] Further information can be found at the LHC@home message board.
[2026-04-10 20:39:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-10 20:39:26] Checking for apptainer binary...
[2026-04-10 20:39:26] which: no apptainer in ((null))
[2026-04-10 20:39:26] apptainer is not installed, using version from CVMFS
[2026-04-10 20:39:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-10 20:39:26] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-04-10 20:39:26] apptainer works
[2026-04-10 20:39:26] Set ATHENA_PROC_NUMBER=4
[2026-04-10 20:39:26] Set ATHENA_CORE_NUMBER=4
[2026-04-10 20:39:26] Starting ATLAS job with PandaID=7083226976
[2026-04-10 20:39:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-10 23:46:25]  *** The last 200 lines of the pilot log: ***
[2026-04-10 23:46:25] 2026-04-10 21:38:58,109 | INFO     | extracted standard info from prmon json
[2026-04-10 23:46:25] 2026-04-10 21:38:58,109 | INFO     | extracted standard memory fields from prmon json
[2026-04-10 23:46:25] 2026-04-10 21:38:58,110 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-10 23:46:25] 2026-04-10 21:38:58,110 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-10 23:46:25] 2026-04-10 21:38:58,115 | INFO     | fitting pss+swap vs Time
[2026-04-10 23:46:25] 2026-04-10 21:38:58,115 | INFO     | sum of square deviations: 1690450300.0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,117 | INFO     | sum of deviations: -1603791503.9999993
[2026-04-10 23:46:25] 2026-04-10 21:38:58,117 | INFO     | mean x (centered): 0.0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,117 | INFO     | mean y: 2347793.3068181816
[2026-04-10 23:46:25] 2026-04-10 21:38:58,117 | INFO     | intersect: 2347793.3068181816
[2026-04-10 23:46:25] 2026-04-10 21:38:58,118 | INFO     | chi2: 1.2808727003933993
[2026-04-10 23:46:25] 2026-04-10 21:38:58,119 | INFO     | sum of square deviations: 1550429070.0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,120 | INFO     | sum of deviations: -1587443442.9999979
[2026-04-10 23:46:25] 2026-04-10 21:38:58,120 | INFO     | mean x (centered): 0.0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,120 | INFO     | mean y: 2347811.1169590643
[2026-04-10 23:46:25] 2026-04-10 21:38:58,120 | INFO     | intersect: 2347811.1169590643
[2026-04-10 23:46:25] 2026-04-10 21:38:58,121 | INFO     | chi2: 1.2805754598148507
[2026-04-10 23:46:25] 2026-04-10 21:38:58,121 | INFO     | current chi2=1.2805754598148507 (change=0.023206098346645783 %)
[2026-04-10 23:46:25] 2026-04-10 21:38:58,121 | INFO     | right removable region: 170
[2026-04-10 23:46:25] 2026-04-10 21:38:58,122 | INFO     | sum of square deviations: 1550429070.0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,123 | INFO     | sum of deviations: -18791968782.0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,123 | INFO     | mean x (centered): 0.0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,123 | INFO     | mean y: 2366119.216374269
[2026-04-10 23:46:25] 2026-04-10 21:38:58,124 | INFO     | intersect: 2366119.216374269
[2026-04-10 23:46:25] 2026-04-10 21:38:58,124 | INFO     | chi2: 0.0759689050329881
[2026-04-10 23:46:25] 2026-04-10 21:38:58,124 | INFO     | current chi2=0.0759689050329881 (change=94.06897305175951 %)
[2026-04-10 23:46:25] 2026-04-10 21:38:58,125 | INFO     | sum of square deviations: 1418361477.5
[2026-04-10 23:46:25] 2026-04-10 21:38:58,126 | INFO     | sum of deviations: -13153228181.5
[2026-04-10 23:46:25] 2026-04-10 21:38:58,126 | INFO     | mean x (centered): 0.0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,126 | INFO     | mean y: 2359629.7771084337
[2026-04-10 23:46:25] 2026-04-10 21:38:58,127 | INFO     | intersect: 2359629.7771084337
[2026-04-10 23:46:25] 2026-04-10 21:38:58,127 | INFO     | chi2: 0.04875615867437258
[2026-04-10 23:46:25] 2026-04-10 21:38:58,127 | INFO     | current chi2=0.04875615867437258 (change=35.82090112632121 %)
[2026-04-10 23:46:25] 2026-04-10 21:38:58,128 | INFO     | sum of square deviations: 1294014960.0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,129 | INFO     | sum of deviations: -9510542086.000002
[2026-04-10 23:46:25] 2026-04-10 21:38:58,129 | INFO     | mean x (centered): 0.0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,129 | INFO     | mean y: 2355160.149068323
[2026-04-10 23:46:25] 2026-04-10 21:38:58,129 | INFO     | intersect: 2355160.149068323
[2026-04-10 23:46:25] 2026-04-10 21:38:58,130 | INFO     | chi2: 0.03940298480875272
[2026-04-10 23:46:25] 2026-04-10 21:38:58,130 | INFO     | current chi2=0.03940298480875272 (change=19.183574177955318 %)
[2026-04-10 23:46:25] 2026-04-10 21:38:58,130 | INFO     | left removable region: 15
[2026-04-10 23:46:25] 2026-04-10 21:38:58,130 | INFO     | sum of square deviations: 1154663510.0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,132 | INFO     | sum of deviations: -9275541355.0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,132 | INFO     | mean x (centered): 0.0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,132 | INFO     | mean y: 2355468.9032258065
[2026-04-10 23:46:25] 2026-04-10 21:38:58,132 | INFO     | intersect: 2355468.9032258065
[2026-04-10 23:46:25] 2026-04-10 21:38:58,133 | INFO     | chi2: 0.03848637660806247
[2026-04-10 23:46:25] 2026-04-10 21:38:58,133 | INFO     | current memory leak: -8.03 B/s (using 155 data points, chi2=0.04)
[2026-04-10 23:46:25] 2026-04-10 21:38:58,134 | INFO     | could have reported an average CPU frequency of 2592 MHz (9 samples)
[2026-04-10 23:46:25] 2026-04-10 21:38:58,134 | INFO     | ..............................
[2026-04-10 23:46:25] 2026-04-10 21:38:58,134 | INFO     | . Timing measurements:
[2026-04-10 23:46:25] 2026-04-10 21:38:58,134 | INFO     | . get job = 0 s
[2026-04-10 23:46:25] 2026-04-10 21:38:58,134 | INFO     | . initial setup = 5 s
[2026-04-10 23:46:25] 2026-04-10 21:38:58,134 | INFO     | . payload setup = 10 s
[2026-04-10 23:46:25] 2026-04-10 21:38:58,134 | INFO     | . stage-in = 0 s
[2026-04-10 23:46:25] 2026-04-10 21:38:58,135 | INFO     | . payload execution = 10726 s
[2026-04-10 23:46:25] 2026-04-10 21:38:58,135 | INFO     | . stage-out = 1 s
[2026-04-10 23:46:25] 2026-04-10 21:38:58,135 | INFO     | . log creation = 0 s
[2026-04-10 23:46:25] 2026-04-10 21:38:58,135 | INFO     | ..............................
[2026-04-10 23:46:25] 2026-04-10 21:38:58,704 | INFO     | 
[2026-04-10 23:46:25] 2026-04-10 21:38:58,704 | INFO     | job summary report
[2026-04-10 23:46:25] 2026-04-10 21:38:58,704 | INFO     | --------------------------------------------------
[2026-04-10 23:46:25] 2026-04-10 21:38:58,704 | INFO     | PanDA job id: 7083226976
[2026-04-10 23:46:25] 2026-04-10 21:38:58,704 | INFO     | task id: 49263208
[2026-04-10 23:46:25] 2026-04-10 21:38:58,704 | INFO     | errors: (none)
[2026-04-10 23:46:25] 2026-04-10 21:38:58,704 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-10 23:46:25] 2026-04-10 21:38:58,704 | INFO     | pilot state: finished 
[2026-04-10 23:46:25] 2026-04-10 21:38:58,705 | INFO     | transexitcode: 0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,705 | INFO     | exeerrorcode: 0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,705 | INFO     | exeerrordiag: 
[2026-04-10 23:46:25] 2026-04-10 21:38:58,705 | INFO     | exitcode: 0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,705 | INFO     | exitmsg: OK
[2026-04-10 23:46:25] 2026-04-10 21:38:58,705 | INFO     | cpuconsumptiontime: 41413 s
[2026-04-10 23:46:25] 2026-04-10 21:38:58,705 | INFO     | nevents: 400
[2026-04-10 23:46:25] 2026-04-10 21:38:58,705 | INFO     | neventsw: 0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,705 | INFO     | pid: 4095195
[2026-04-10 23:46:25] 2026-04-10 21:38:58,705 | INFO     | pgrp: 4095195
[2026-04-10 23:46:25] 2026-04-10 21:38:58,705 | INFO     | corecount: 4
[2026-04-10 23:46:25] 2026-04-10 21:38:58,705 | INFO     | event service: False
[2026-04-10 23:46:25] 2026-04-10 21:38:58,705 | INFO     | sizes: {0: 2279905, 1: 2281479, 11: 2281507, 10739: 2310418, 10740: 2310417, 10741: 2319677, 10743: 2319879}
[2026-04-10 23:46:25] 2026-04-10 21:38:58,706 | INFO     | --------------------------------------------------
[2026-04-10 23:46:25] 2026-04-10 21:38:58,706 | INFO     | 
[2026-04-10 23:46:25] 2026-04-10 21:38:58,706 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/0
[2026-04-10 23:46:25] 2026-04-10 21:38:58,728 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,728 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,728 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,728 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,729 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,729 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,729 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,729 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,730 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,730 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-10 23:46:25] 2026-04-10 21:38:58,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,730 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-10 23:46:25] 2026-04-10 21:38:58,730 | INFO     | job 7083226976 has completed (purged errors)
[2026-04-10 23:46:25] 2026-04-10 21:38:58,730 | INFO     | overall cleanup function is called
[2026-04-10 23:46:25] 2026-04-10 21:38:59,560 | WARNING  | process 4095195 can no longer be monitored (due to stat problems) - aborting
[2026-04-10 23:46:25] 2026-04-10 21:38:59,735 | INFO     | --- collectZombieJob: --- 10, [4095195]
[2026-04-10 23:46:25] 2026-04-10 21:38:59,737 | INFO     | zombie collector waiting for pid 4095195
[2026-04-10 23:46:25] 2026-04-10 21:38:59,738 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-10 23:46:25] 2026-04-10 21:38:59,738 | INFO     | collected zombie processes
[2026-04-10 23:46:25] 2026-04-10 21:38:59,738 | INFO     | will attempt to kill all subprocesses of pid=4095195
[2026-04-10 23:46:25] 2026-04-10 21:39:00,154 | INFO     | using path: /var/lib/boinc/var/slot64/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-10 23:46:25] 2026-04-10 21:39:00,808 | INFO     | process IDs to be killed: [4095195] (in reverse order)
[2026-04-10 23:46:25] 2026-04-10 21:39:00,943 | WARNING  | found no corresponding commands to process id(s)
[2026-04-10 23:46:25] 2026-04-10 21:39:00,944 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-10 23:46:25] 2026-04-10 21:39:00,979 | INFO     | did not find any defunct processes belonging to 4095195
[2026-04-10 23:46:25] 2026-04-10 21:39:01,005 | INFO     | did not find any defunct processes belonging to 4095195
[2026-04-10 23:46:25] 2026-04-10 21:39:01,005 | INFO     | Ready for new job
[2026-04-10 23:46:25] 2026-04-10 21:39:01,008 | INFO     | **************************************
[2026-04-10 23:46:25] 2026-04-10 21:39:01,009 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-10 23:46:25] 2026-04-10 21:39:01,009 | INFO     | **************************************
[2026-04-10 23:46:25] 2026-04-10 21:39:01,009 | INFO     | 
[2026-04-10 23:46:25] 2026-04-10 21:39:01,015 | INFO     | architecture information:
[2026-04-10 23:46:25] 2026-04-10 21:39:01,015 | INFO     | executing command: cat /etc/os-release
[2026-04-10 23:46:25] 2026-04-10 21:39:01,026 | INFO     | number of running child processes to parent process 4095195: 1
[2026-04-10 23:46:25] 2026-04-10 21:39:01,027 | INFO     | maximum number of monitored processes: 6
[2026-04-10 23:46:25] 2026-04-10 21:39:01,027 | INFO     | aborting job monitoring since job object (job id=7083226976) has expired
[2026-04-10 23:46:25] 2026-04-10 21:39:01,033 | INFO     | cat /etc/os-release:
[2026-04-10 23:46:25] NAME="CentOS Linux"
[2026-04-10 23:46:25] VERSION="7 (Core)"
[2026-04-10 23:46:25] ID="centos"
[2026-04-10 23:46:25] ID_LIKE="rhel fedora"
[2026-04-10 23:46:25] VERSION_ID="7"
[2026-04-10 23:46:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-10 23:46:25] ANSI_COLOR="0;31"
[2026-04-10 23:46:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-10 23:46:25] HOME_URL="https://www.centos.org/"
[2026-04-10 23:46:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-10 23:46:25] 
[2026-04-10 23:46:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-10 23:46:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-10 23:46:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-10 23:46:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-10 23:46:25] 
[2026-04-10 23:46:25] 2026-04-10 21:39:01,034 | INFO     | **************************************
[2026-04-10 23:46:25] 2026-04-10 21:39:01,537 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-04-10 23:46:25] 2026-04-10 21:39:01,559 | INFO     | sufficient remaining disk space (29995565056 B)
[2026-04-10 23:46:25] 2026-04-10 21:39:01,559 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-10 23:46:25] 2026-04-10 21:39:01,559 | INFO     | current server update state: UPDATING_FINAL
[2026-04-10 23:46:25] 2026-04-10 21:39:01,560 | INFO     | update_server=False
[2026-04-10 23:46:25] 2026-04-10 21:39:01,560 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-10 23:46:25] 2026-04-10 21:39:01,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-10 23:46:25] 2026-04-10 21:39:01,560 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-10 23:46:25] 2026-04-10 21:39:01,561 | INFO     | will abort loop
[2026-04-10 23:46:25] 2026-04-10 21:39:01,743 | INFO     | all data control threads have been joined
[2026-04-10 23:46:25] 2026-04-10 21:39:02,020 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-10 23:46:25] 2026-04-10 21:39:02,565 | INFO     | [job] retrieve thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:02,566 | INFO     | [job] job monitor thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:02,627 | INFO     | [job] create_data_payload thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:02,650 | INFO     | [payload] failed_post thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:02,670 | INFO     | all job control threads have been joined
[2026-04-10 23:46:25] 2026-04-10 21:39:02,681 | INFO     | all payload control threads have been joined
[2026-04-10 23:46:25] 2026-04-10 21:39:02,748 | INFO     | [data] control thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:02,835 | INFO     | [payload] validate_pre thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:03,094 | INFO     | [payload] execute_payloads thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:03,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-10 23:46:25] 2026-04-10 21:39:03,528 | INFO     | [data] copytool_in thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:03,565 | INFO     | [data] copytool_out thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:03,675 | INFO     | [job] control thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:03,685 | INFO     | [payload] validate_post thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:03,687 | INFO     | [payload] control thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:04,053 | INFO     | [job] validate thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:04,290 | INFO     | [job] queue monitor thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:06,025 | INFO     | [data] queue_monitor thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:12,262 | INFO     | job.realtimelogging is not enabled
[2026-04-10 23:46:25] 2026-04-10 21:39:13,267 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-10 23:46:25] 2026-04-10 21:39:32,100 | INFO     | PID=4090112 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-10 23:46:25] 2026-04-10 21:39:32,100 | INFO     | .. there are 11 such processes running
[2026-04-10 23:46:25] 2026-04-10 21:39:32,100 | INFO     | found 0 job(s) in 20 queues
[2026-04-10 23:46:25] 2026-04-10 21:39:32,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-10 23:46:25] 2026-04-10 21:39:32,100 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-10 23:46:25] 2026-04-10 21:39:37,131 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-04-10 23:46:25] 2026-04-10 21:40:00,451 | INFO     | [monitor] cgroup control has ended
[2026-04-10 23:46:25] 2026-04-10 21:40:02,058 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22677138822976)>', '<ExcThread(monitor, started 22676898064128)>']
[2026-04-10 23:46:25] 2026-04-10 21:40:02,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-10 23:46:25] 2026-04-10 21:40:02,229 | INFO     | [monitor] control thread has ended
[2026-04-10 23:46:25] 2026-04-10 21:40:07,083 | INFO     | all workflow threads have been joined
[2026-04-10 23:46:25] 2026-04-10 21:40:07,083 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-10 23:46:25] 2026-04-10 21:40:07,084 | INFO     | traces error code: 0
[2026-04-10 23:46:25] 2026-04-10 21:40:07,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-10 23:46:25] 2026-04-10 21:40:07,256 [wrapper] ==== pilot stdout END ====
[2026-04-10 23:46:25] 2026-04-10 21:40:07,259 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-10 23:46:25] 2026-04-10 21:40:07,261 [wrapper] pilotpid: 4090112
[2026-04-10 23:46:25] 2026-04-10 21:40:07,264 [wrapper] Pilot exit status: 0
[2026-04-10 23:46:25] 2026-04-10 21:40:07,273 [wrapper] pandaids: 7083226976
[2026-04-10 23:46:25] 2026-04-10 21:40:07,370 [wrapper] cleanup supervisor_pilot  120210 4090113
[2026-04-10 23:46:25] 2026-04-10 21:40:07,373 [wrapper] Test setup, not cleaning
[2026-04-10 23:46:25] 2026-04-10 21:40:07,376 [wrapper] apfmon messages muted
[2026-04-10 23:46:25] 2026-04-10 21:40:07,379 [wrapper] ==== wrapper stdout END ====
[2026-04-10 23:46:25] 2026-04-10 21:40:07,381 [wrapper] ==== wrapper stderr END ====
[2026-04-10 23:46:25]  *** Error codes and diagnostics ***
[2026-04-10 23:46:25]     "exeErrorCode": 0,
[2026-04-10 23:46:25]     "pilotErrorCode": 0,
[2026-04-10 23:46:25]  *** Listing of results directory ***
[2026-04-10 23:46:25] total 407604
[2026-04-10 23:46:25] -rwx------. 1 boinc boinc     36322 Apr  9 23:01 runpilot2-wrapper.sh
[2026-04-10 23:46:25] -rw-r--r--. 1 boinc boinc    644190 Apr  9 23:06 pilot3.tar.gz
[2026-04-10 23:46:25] -rw-r--r--. 1 boinc boinc      5094 Apr  9 23:15 queuedata.json
[2026-04-10 23:46:25] -rw-r--r--. 1 boinc boinc       100 Apr 10 20:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-10 23:46:25] -rwxr-xr-x. 1 boinc boinc      7986 Apr 10 20:39 run_atlas
[2026-04-10 23:46:25] -rw-r--r--. 1 boinc boinc       105 Apr 10 20:39 job.xml
[2026-04-10 23:46:25] -rw-r--r--. 2 boinc boinc 222701704 Apr 10 20:39 EVNT.49263206._000545.pool.root.1
[2026-04-10 23:46:25] -rw-r--r--. 1 boinc boinc      6480 Apr 10 20:39 init_data.xml
[2026-04-10 23:46:25] -rw-r--r--. 2 boinc boinc     15665 Apr 10 20:39 start_atlas.sh
[2026-04-10 23:46:25] drwxrwx--x. 2 boinc boinc      4096 Apr 10 20:39 shared
[2026-04-10 23:46:25] -rw-r--r--. 2 boinc boinc    656929 Apr 10 20:39 input.tar.gz
[2026-04-10 23:46:25] -rw-r--r--. 1 boinc boinc         0 Apr 10 20:39 boinc_lockfile
[2026-04-10 23:46:25] -rw-r--r--. 1 boinc boinc      2575 Apr 10 20:39 pandaJob.out
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc    997876 Apr 10 20:39 agis_schedconf.cvmfs.json
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc   1511579 Apr 10 20:39 agis_ddmendpoints.agis.ALL.json
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc       452 Apr 10 20:39 workernode_map.json
[2026-04-10 23:46:25] drwx------. 5 boinc boinc      4096 Apr 10 20:39 pilot3
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc 188001248 Apr 10 23:38 HITS.49263208._026012.pool.root.1
[2026-04-10 23:46:25] -rw-r--r--. 1 boinc boinc       488 Apr 10 23:38 boinc_task_state.xml
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc        95 Apr 10 23:38 pilot_heartbeat.json
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc      1035 Apr 10 23:38 memory_monitor_summary.json
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc    298912 Apr 10 23:38 log.49263208._026012.job.log.tgz.1
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc      6424 Apr 10 23:38 heartbeat_new.json
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc      6315 Apr 10 23:38 heartbeat.json
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc      5191 Apr 10 23:40 pilotlog.txt
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc   1015785 Apr 10 23:40 log.49263208._026012.job.log.1
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc       357 Apr 10 23:40 output.list
[2026-04-10 23:46:25] -rw-r--r--. 1 boinc boinc       410 Apr 10 23:40 runtime_log
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc   1331200 Apr 10 23:40 result.tar.gz
[2026-04-10 23:46:25] -rw-r--r--. 1 boinc boinc      8827 Apr 10 23:40 runtime_log.err
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc       665 Apr 10 23:40 13b06dd75749.diag
[2026-04-10 23:46:25] -rw-r--r--. 1 boinc boinc        27 Apr 10 23:46 wrapper_checkpoint.txt
[2026-04-10 23:46:25] -rw-r--r--. 1 boinc boinc      8192 Apr 10 23:46 boinc_mmap_file
[2026-04-10 23:46:25] -rw-r--r--. 1 boinc boinc     20766 Apr 10 23:46 stderr.txt
[2026-04-10 23:46:25] HITS file was successfully produced:
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc 188001248 Apr 10 23:38 shared/HITS.pool.root.1
[2026-04-10 23:46:25]  *** Contents of shared directory: ***
[2026-04-10 23:46:25] total 403048
[2026-04-10 23:46:25] -rw-r--r--. 2 boinc boinc 222701704 Apr 10 20:39 ATLAS.root_0
[2026-04-10 23:46:25] -rw-r--r--. 2 boinc boinc     15665 Apr 10 20:39 start_atlas.sh
[2026-04-10 23:46:25] -rw-r--r--. 2 boinc boinc    656929 Apr 10 20:39 input.tar.gz
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc 188001248 Apr 10 23:38 HITS.pool.root.1
[2026-04-10 23:46:25] -rw-------. 1 boinc boinc   1331200 Apr 10 23:40 result.tar.gz
23:46:27 (4086006): run_atlas exited; CPU time 41823.030793
23:46:27 (4086006): called boinc_finish(0)

</stderr_txt>
]]>

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