Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:15:28 (15644): wrapper (7.7.26015): starting
04:15:28 (15644): wrapper: running run_atlas (--nthreads 8)
[2026-04-10 04:15:28] Arguments: --nthreads 8
[2026-04-10 04:15:28] Threads: 8
[2026-04-10 04:15:28] Checking for CVMFS
[2026-04-10 04:15:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-10 04:15:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-10 04:15:30] Running cvmfs_config stat atlas.cern.ch
[2026-04-10 04:15:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-10 04:15:31] 2.11.2.0 19153 12279 103604 158281 0 54 15775693 25165824 899 130560 0 6197211 99.850 4906617 8742 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-10 04:15:31] CVMFS is ok
[2026-04-10 04:15:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-10 04:15:31] Checking for apptainer binary...
[2026-04-10 04:15:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-10 04:15:31] Running /usr/bin/apptainer --version
[2026-04-10 04:15:31] apptainer version 1.3.2-1.el7
[2026-04-10 04:15:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-10 04:15:52] cg-vwn472.simple-grid.lan
[2026-04-10 04:15:52] apptainer works
[2026-04-10 04:15:53] Set ATHENA_PROC_NUMBER=8
[2026-04-10 04:15:53] Set ATHENA_CORE_NUMBER=8
[2026-04-10 04:15:53] Starting ATLAS job with PandaID=7083094778
[2026-04-10 04:15:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-10 08:52:02]  *** The last 200 lines of the pilot log: ***
[2026-04-10 08:52:02] 2026-04-10 06:50:44,124 | INFO     | log transfer has been attempted: DONE
[2026-04-10 08:52:02] 2026-04-10 06:50:44,124 | INFO     | job 7083094778 has finished - writing final server update
[2026-04-10 08:52:02] 2026-04-10 06:50:44,125 | INFO     | total number of processed events: 400 (read)
[2026-04-10 08:52:02] 2026-04-10 06:50:44,127 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7083094778/memory_monitor_summary.json (trf name=prmon)
[2026-04-10 08:52:02] 2026-04-10 06:50:44,128 | INFO     | extracted standard info from prmon json
[2026-04-10 08:52:02] 2026-04-10 06:50:44,128 | INFO     | extracted standard memory fields from prmon json
[2026-04-10 08:52:02] 2026-04-10 06:50:44,128 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-10 08:52:02] 2026-04-10 06:50:44,128 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-10 08:52:02] 2026-04-10 06:50:44,143 | INFO     | fitting pss+swap vs Time
[2026-04-10 08:52:02] 2026-04-10 06:50:44,144 | INFO     | sum of square deviations: 5325139844.5
[2026-04-10 08:52:02] 2026-04-10 06:50:44,146 | INFO     | sum of deviations: 83528685035.5
[2026-04-10 08:52:02] 2026-04-10 06:50:44,146 | INFO     | mean x (centered): 0.0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,146 | INFO     | mean y: 2438624.8720930233
[2026-04-10 08:52:02] 2026-04-10 06:50:44,146 | INFO     | intersect: 2438624.8720930233
[2026-04-10 08:52:02] 2026-04-10 06:50:44,147 | INFO     | chi2: 9.227550944190007
[2026-04-10 08:52:02] 2026-04-10 06:50:44,147 | INFO     | sum of square deviations: 5021496942.0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,150 | INFO     | sum of deviations: 116306217605.0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,150 | INFO     | mean x (centered): 0.0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,150 | INFO     | mean y: 2454883.272727273
[2026-04-10 08:52:02] 2026-04-10 06:50:44,150 | INFO     | intersect: 2454883.272727273
[2026-04-10 08:52:02] 2026-04-10 06:50:44,151 | INFO     | chi2: 7.7695747608499355
[2026-04-10 08:52:02] 2026-04-10 06:50:44,151 | INFO     | current chi2=7.7695747608499355 (change=15.800250707454127 %)
[2026-04-10 08:52:02] 2026-04-10 06:50:44,151 | INFO     | right removable region: 252
[2026-04-10 08:52:02] 2026-04-10 06:50:44,151 | INFO     | sum of square deviations: 5021496942.0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,161 | INFO     | sum of deviations: -6740959390.999989
[2026-04-10 08:52:02] 2026-04-10 06:50:44,161 | INFO     | mean x (centered): 0.0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,161 | INFO     | mean y: 2483936.418972332
[2026-04-10 08:52:02] 2026-04-10 06:50:44,161 | INFO     | intersect: 2483936.418972332
[2026-04-10 08:52:02] 2026-04-10 06:50:44,162 | INFO     | chi2: 4.220033590163569
[2026-04-10 08:52:02] 2026-04-10 06:50:44,162 | INFO     | current chi2=4.220033590163569 (change=54.26702474267399 %)
[2026-04-10 08:52:02] 2026-04-10 06:50:44,162 | INFO     | sum of square deviations: 4729621702.0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,165 | INFO     | sum of deviations: -68370353578.5
[2026-04-10 08:52:02] 2026-04-10 06:50:44,165 | INFO     | mean x (centered): 0.0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,165 | INFO     | mean y: 2516053.5282258065
[2026-04-10 08:52:02] 2026-04-10 06:50:44,165 | INFO     | intersect: 2516053.5282258065
[2026-04-10 08:52:02] 2026-04-10 06:50:44,165 | INFO     | chi2: 1.9013366776773595
[2026-04-10 08:52:02] 2026-04-10 06:50:44,166 | INFO     | current chi2=1.9013366776773595 (change=54.944987117894875 %)
[2026-04-10 08:52:02] 2026-04-10 06:50:44,166 | INFO     | sum of square deviations: 4449281562.0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,168 | INFO     | sum of deviations: -76354452252.0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,169 | INFO     | mean x (centered): 0.0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,169 | INFO     | mean y: 2520366.0411522635
[2026-04-10 08:52:02] 2026-04-10 06:50:44,169 | INFO     | intersect: 2520366.0411522635
[2026-04-10 08:52:02] 2026-04-10 06:50:44,169 | INFO     | chi2: 1.8210593054471775
[2026-04-10 08:52:02] 2026-04-10 06:50:44,169 | INFO     | current chi2=1.8210593054471775 (change=4.222154507020156 %)
[2026-04-10 08:52:02] 2026-04-10 06:50:44,169 | INFO     | left removable region: 15
[2026-04-10 08:52:02] 2026-04-10 06:50:44,170 | INFO     | sum of square deviations: 4127772278.0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,183 | INFO     | sum of deviations: -42246510933.00001
[2026-04-10 08:52:02] 2026-04-10 06:50:44,190 | INFO     | mean x (centered): 0.0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,191 | INFO     | mean y: 2539472.8438818567
[2026-04-10 08:52:02] 2026-04-10 06:50:44,191 | INFO     | intersect: 2539472.8438818567
[2026-04-10 08:52:02] 2026-04-10 06:50:44,191 | INFO     | chi2: 0.18992905425440326
[2026-04-10 08:52:02] 2026-04-10 06:50:44,191 | INFO     | current memory leak: -10.23 B/s (using 237 data points, chi2=0.19)
[2026-04-10 08:52:02] 2026-04-10 06:50:44,192 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-04-10 08:52:02] 2026-04-10 06:50:44,192 | INFO     | ..............................
[2026-04-10 08:52:02] 2026-04-10 06:50:44,192 | INFO     | . Timing measurements:
[2026-04-10 08:52:02] 2026-04-10 06:50:44,192 | INFO     | . get job = 0 s
[2026-04-10 08:52:02] 2026-04-10 06:50:44,193 | INFO     | . initial setup = 125 s
[2026-04-10 08:52:02] 2026-04-10 06:50:44,193 | INFO     | . payload setup = 276 s
[2026-04-10 08:52:02] 2026-04-10 06:50:44,193 | INFO     | . stage-in = 0 s
[2026-04-10 08:52:02] 2026-04-10 06:50:44,193 | INFO     | . payload execution = 15802 s
[2026-04-10 08:52:02] 2026-04-10 06:50:44,193 | INFO     | . stage-out = 4 s
[2026-04-10 08:52:02] 2026-04-10 06:50:44,193 | INFO     | . log creation = 2 s
[2026-04-10 08:52:02] 2026-04-10 06:50:44,193 | INFO     | ..............................
[2026-04-10 08:52:02] 2026-04-10 06:50:44,338 | INFO     | 
[2026-04-10 08:52:02] 2026-04-10 06:50:44,338 | INFO     | job summary report
[2026-04-10 08:52:02] 2026-04-10 06:50:44,338 | INFO     | --------------------------------------------------
[2026-04-10 08:52:02] 2026-04-10 06:50:44,338 | INFO     | PanDA job id: 7083094778
[2026-04-10 08:52:02] 2026-04-10 06:50:44,338 | INFO     | task id: 49263191
[2026-04-10 08:52:02] 2026-04-10 06:50:44,338 | INFO     | errors: (none)
[2026-04-10 08:52:02] 2026-04-10 06:50:44,338 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-10 08:52:02] 2026-04-10 06:50:44,339 | INFO     | pilot state: finished 
[2026-04-10 08:52:02] 2026-04-10 06:50:44,339 | INFO     | transexitcode: 0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,339 | INFO     | exeerrorcode: 0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,339 | INFO     | exeerrordiag: 
[2026-04-10 08:52:02] 2026-04-10 06:50:44,339 | INFO     | exitcode: 0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,339 | INFO     | exitmsg: OK
[2026-04-10 08:52:02] 2026-04-10 06:50:44,339 | INFO     | cpuconsumptiontime: 58942 s
[2026-04-10 08:52:02] 2026-04-10 06:50:44,339 | INFO     | nevents: 400
[2026-04-10 08:52:02] 2026-04-10 06:50:44,339 | INFO     | neventsw: 0
[2026-04-10 08:52:02] 2026-04-10 06:50:44,339 | INFO     | pid: 24116
[2026-04-10 08:52:02] 2026-04-10 06:50:44,340 | INFO     | pgrp: 24116
[2026-04-10 08:52:02] 2026-04-10 06:50:44,340 | INFO     | corecount: 8
[2026-04-10 08:52:02] 2026-04-10 06:50:44,340 | INFO     | event service: False
[2026-04-10 08:52:02] 2026-04-10 06:50:44,340 | INFO     | sizes: {0: 2279010, 1: 2279695, 2: 2280096, 3: 2281524, 13: 2281552, 16083: 2313099, 16088: 2322153, 16089: 2322291}
[2026-04-10 08:52:02] 2026-04-10 06:50:44,340 | INFO     | --------------------------------------------------
[2026-04-10 08:52:02] 2026-04-10 06:50:44,340 | INFO     | 
[2026-04-10 08:52:02] 2026-04-10 06:50:44,340 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-10 08:52:02] 2026-04-10 06:50:45,967 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,967 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,967 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,967 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,968 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,968 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,968 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,968 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,968 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,969 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-10 08:52:02] 2026-04-10 06:50:45,969 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,969 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-10 08:52:02] 2026-04-10 06:50:45,969 | INFO     | job 7083094778 has completed (purged errors)
[2026-04-10 08:52:02] 2026-04-10 06:50:45,969 | INFO     | overall cleanup function is called
[2026-04-10 08:52:02] 2026-04-10 06:50:46,978 | INFO     | --- collectZombieJob: --- 10, [24116]
[2026-04-10 08:52:02] 2026-04-10 06:50:46,978 | INFO     | zombie collector waiting for pid 24116
[2026-04-10 08:52:02] 2026-04-10 06:50:46,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-10 08:52:02] 2026-04-10 06:50:46,979 | INFO     | collected zombie processes
[2026-04-10 08:52:02] 2026-04-10 06:50:46,979 | INFO     | will attempt to kill all subprocesses of pid=24116
[2026-04-10 08:52:02] 2026-04-10 06:50:47,542 | INFO     | process IDs to be killed: [24116] (in reverse order)
[2026-04-10 08:52:02] 2026-04-10 06:50:48,575 | WARNING  | found no corresponding commands to process id(s)
[2026-04-10 08:52:02] 2026-04-10 06:50:48,575 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-10 08:52:02] 2026-04-10 06:50:48,577 | INFO     | did not find any defunct processes belonging to 24116
[2026-04-10 08:52:02] 2026-04-10 06:50:48,583 | INFO     | did not find any defunct processes belonging to 24116
[2026-04-10 08:52:02] 2026-04-10 06:50:48,584 | INFO     | Ready for new job
[2026-04-10 08:52:02] 2026-04-10 06:50:48,586 | INFO     | **************************************
[2026-04-10 08:52:02] 2026-04-10 06:50:48,586 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-10 08:52:02] 2026-04-10 06:50:48,586 | INFO     | **************************************
[2026-04-10 08:52:02] 2026-04-10 06:50:48,586 | INFO     | 
[2026-04-10 08:52:02] 2026-04-10 06:50:48,587 | INFO     | pilot is running in a VM
[2026-04-10 08:52:02] 2026-04-10 06:50:48,587 | INFO     | architecture information:
[2026-04-10 08:52:02] 2026-04-10 06:50:48,587 | INFO     | executing command: cat /etc/os-release
[2026-04-10 08:52:02] 2026-04-10 06:50:49,271 | INFO     | cat /etc/os-release:
[2026-04-10 08:52:02] NAME="CentOS Linux"
[2026-04-10 08:52:02] VERSION="7 (Core)"
[2026-04-10 08:52:02] ID="centos"
[2026-04-10 08:52:02] ID_LIKE="rhel fedora"
[2026-04-10 08:52:02] VERSION_ID="7"
[2026-04-10 08:52:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-10 08:52:02] ANSI_COLOR="0;31"
[2026-04-10 08:52:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-10 08:52:02] HOME_URL="https://www.centos.org/"
[2026-04-10 08:52:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-10 08:52:02] 
[2026-04-10 08:52:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-10 08:52:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-10 08:52:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-10 08:52:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-10 08:52:02] 
[2026-04-10 08:52:02] 2026-04-10 06:50:49,271 | INFO     | **************************************
[2026-04-10 08:52:02] 2026-04-10 06:50:49,931 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-10 08:52:02] 2026-04-10 06:50:51,826 | INFO     | sufficient remaining disk space (496494444544 B)
[2026-04-10 08:52:02] 2026-04-10 06:50:51,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-10 08:52:02] 2026-04-10 06:50:51,827 | INFO     | current server update state: UPDATING_FINAL
[2026-04-10 08:52:02] 2026-04-10 06:50:51,827 | INFO     | update_server=False
[2026-04-10 08:52:02] 2026-04-10 06:50:51,827 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-10 08:52:02] 2026-04-10 06:50:51,919 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-10 08:52:02] 2026-04-10 06:50:51,919 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-10 08:52:02] 2026-04-10 06:50:51,920 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-10 08:52:02] 2026-04-10 06:50:51,920 | INFO     | will abort loop
[2026-04-10 08:52:02] 2026-04-10 06:50:52,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-10 08:52:02] 2026-04-10 06:50:52,016 | INFO     | all payload control threads have been joined
[2026-04-10 08:52:02] 2026-04-10 06:50:52,639 | INFO     | all job control threads have been joined
[2026-04-10 08:52:02] 2026-04-10 06:50:52,830 | INFO     | all data control threads have been joined
[2026-04-10 08:52:02] 2026-04-10 06:50:52,832 | INFO     | [job] retrieve thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:52,848 | INFO     | [payload] validate_post thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:52,925 | INFO     | [job] job monitor thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:52,990 | INFO     | [job] create_data_payload thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:52,991 | INFO     | [payload] validate_pre thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:53,022 | INFO     | [payload] control thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:53,391 | INFO     | [payload] failed_post thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:53,400 | INFO     | [job] validate thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:53,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-10 08:52:02] 2026-04-10 06:50:53,645 | INFO     | [job] control thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:53,673 | INFO     | [payload] execute_payloads thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:53,836 | INFO     | [data] control thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:54,008 | INFO     | [data] copytool_in thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:54,022 | INFO     | [data] copytool_out thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:54,325 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:54,491 | INFO     | [job] queue monitor thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:50:54,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-10 08:52:02] 2026-04-10 06:50:58,648 | INFO     | [data] queue_monitor thread has finished
[2026-04-10 08:52:02] 2026-04-10 06:51:17,125 | INFO     | PID=19644 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-10 08:52:02] 2026-04-10 06:51:17,126 | INFO     | .. there are 2 such processes running
[2026-04-10 08:52:02] 2026-04-10 06:51:17,126 | INFO     | found 0 job(s) in 20 queues
[2026-04-10 08:52:02] 2026-04-10 06:51:17,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-10 08:52:02] 2026-04-10 06:51:17,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-10 08:52:02] 2026-04-10 06:51:49,819 | INFO     | [monitor] cgroup control has ended
[2026-04-10 08:52:02] 2026-04-10 06:51:51,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139750784952128)>', '<ExcThread(monitor, started 139750476326656)>']
[2026-04-10 08:52:02] 2026-04-10 06:51:52,335 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-10 08:52:02] 2026-04-10 06:51:52,335 | INFO     | [monitor] control thread has ended
[2026-04-10 08:52:02] 2026-04-10 06:51:56,519 | INFO     | all workflow threads have been joined
[2026-04-10 08:52:02] 2026-04-10 06:51:56,519 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-10 08:52:02] 2026-04-10 06:51:56,520 | INFO     | traces error code: 0
[2026-04-10 08:52:02] 2026-04-10 06:51:56,520 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-10 08:52:02] 2026-04-10 06:51:57,083 [wrapper] ==== pilot stdout END ====
[2026-04-10 08:52:02] 2026-04-10 06:51:57,174 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-10 08:52:02] 2026-04-10 06:51:57,274 [wrapper] pilotpid: 19644
[2026-04-10 08:52:02] 2026-04-10 06:51:57,406 [wrapper] Pilot exit status: 0
[2026-04-10 08:52:02] 2026-04-10 06:51:57,965 [wrapper] pandaids: 7083094778
[2026-04-10 08:52:02] 2026-04-10 06:51:58,846 [wrapper] cleanup supervisor_pilot 30417 19645
[2026-04-10 08:52:02] 2026-04-10 06:51:58,940 [wrapper] Test setup, not cleaning
[2026-04-10 08:52:02] 2026-04-10 06:51:59,035 [wrapper] apfmon messages muted
[2026-04-10 08:52:02] 2026-04-10 06:51:59,129 [wrapper] ==== wrapper stdout END ====
[2026-04-10 08:52:02] 2026-04-10 06:51:59,228 [wrapper] ==== wrapper stderr END ====
[2026-04-10 08:52:02]  *** Error codes and diagnostics ***
[2026-04-10 08:52:02]     "exeErrorCode": 0,
[2026-04-10 08:52:02]     "pilotErrorCode": 0,
[2026-04-10 08:52:02]  *** Listing of results directory ***
[2026-04-10 08:52:02] total 417156
[2026-04-10 08:52:02] -rw-r--r--. 1 boinc boinc    644190 Apr  9 22:03 pilot3.tar.gz
[2026-04-10 08:52:02] -rwx------. 1 boinc boinc     36322 Apr  9 22:54 runpilot2-wrapper.sh
[2026-04-10 08:52:02] -rw-r--r--. 1 boinc boinc      5094 Apr  9 22:57 queuedata.json
[2026-04-10 08:52:02] -rw-r--r--. 1 boinc boinc       100 Apr 10 04:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-10 08:52:02] -rwxr-xr-x. 1 boinc boinc      7986 Apr 10 04:15 run_atlas
[2026-04-10 08:52:02] -rw-r--r--. 1 boinc boinc       105 Apr 10 04:15 job.xml
[2026-04-10 08:52:02] -rw-r--r--. 1 boinc boinc      6307 Apr 10 04:15 init_data.xml
[2026-04-10 08:52:02] -rw-r--r--. 2 boinc boinc 222921648 Apr 10 04:15 EVNT.49263189._000498.pool.root.1
[2026-04-10 08:52:02] -rw-r--r--. 2 boinc boinc     15665 Apr 10 04:15 start_atlas.sh
[2026-04-10 08:52:02] drwxrwx--x. 2 boinc boinc        68 Apr 10 04:15 shared
[2026-04-10 08:52:02] -rw-r--r--. 2 boinc boinc    656931 Apr 10 04:15 input.tar.gz
[2026-04-10 08:52:02] -rw-r--r--. 1 boinc boinc         0 Apr 10 04:15 boinc_lockfile
[2026-04-10 08:52:02] -rw-r--r--. 1 boinc boinc      2576 Apr 10 04:15 pandaJob.out
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc       415 Apr 10 04:22 workernode_map.json
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc    997892 Apr 10 04:22 agis_schedconf.cvmfs.json
[2026-04-10 08:52:02] drwx------. 5 boinc boinc      4096 Apr 10 04:22 pilot3
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc 196442674 Apr 10 08:49 HITS.49263191._033031.pool.root.1
[2026-04-10 08:52:02] -rw-r--r--. 1 boinc boinc       489 Apr 10 08:49 boinc_task_state.xml
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc      1012 Apr 10 08:50 memory_monitor_summary.json
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc   1511579 Apr 10 08:50 agis_ddmendpoints.agis.ALL.json
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc        95 Apr 10 08:50 pilot_heartbeat.json
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc    397255 Apr 10 08:50 log.49263191._033031.job.log.tgz.1
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc      6351 Apr 10 08:50 heartbeat_new.json
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc      6242 Apr 10 08:50 heartbeat.json
[2026-04-10 08:52:02] -rw-r--r--. 1 boinc boinc      8192 Apr 10 08:51 boinc_mmap_file
[2026-04-10 08:52:02] -rw-r--r--. 1 boinc boinc        28 Apr 10 08:51 wrapper_checkpoint.txt
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc      5065 Apr 10 08:51 pilotlog.txt
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc   1481884 Apr 10 08:51 log.49263191._033031.job.log.1
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc       357 Apr 10 08:52 output.list
[2026-04-10 08:52:02] -rw-r--r--. 1 boinc boinc       410 Apr 10 08:52 runtime_log
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc   1894400 Apr 10 08:52 result.tar.gz
[2026-04-10 08:52:02] -rw-r--r--. 1 boinc boinc      8438 Apr 10 08:52 runtime_log.err
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc       656 Apr 10 08:52 11fec375fe9f.diag
[2026-04-10 08:52:02] -rw-r--r--. 1 boinc boinc     20621 Apr 10 08:52 stderr.txt
[2026-04-10 08:52:02] HITS file was successfully produced:
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc 196442674 Apr 10 08:49 shared/HITS.pool.root.1
[2026-04-10 08:52:02]  *** Contents of shared directory: ***
[2026-04-10 08:52:02] total 412052
[2026-04-10 08:52:02] -rw-r--r--. 2 boinc boinc 222921648 Apr 10 04:15 ATLAS.root_0
[2026-04-10 08:52:02] -rw-r--r--. 2 boinc boinc     15665 Apr 10 04:15 start_atlas.sh
[2026-04-10 08:52:02] -rw-r--r--. 2 boinc boinc    656931 Apr 10 04:15 input.tar.gz
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc 196442674 Apr 10 08:49 HITS.pool.root.1
[2026-04-10 08:52:02] -rw-------. 1 boinc boinc   1894400 Apr 10 08:52 result.tar.gz
08:52:03 (15644): run_atlas exited; CPU time 59109.295296
08:52:03 (15644): called boinc_finish(0)

</stderr_txt>
]]>

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