Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:47:22 (17200): wrapper (7.7.26015): starting
06:47:22 (17200): wrapper: running run_atlas (--nthreads 8)
[2026-04-10 06:47:22] Arguments: --nthreads 8
[2026-04-10 06:47:22] Threads: 8
[2026-04-10 06:47:22] Checking for CVMFS
[2026-04-10 06:47:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-10 06:47:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-10 06:47:23] Running cvmfs_config stat atlas.cern.ch
[2026-04-10 06:47:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-10 06:47:23] 2.11.2.0 18641 12453 98836 158286 2 242 15090344 25165824 498 130560 0 6141697 99.910 1951403 9293 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-10 06:47:23] CVMFS is ok
[2026-04-10 06:47:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-10 06:47:23] Checking for apptainer binary...
[2026-04-10 06:47:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-10 06:47:23] Running /usr/bin/apptainer --version
[2026-04-10 06:47:23] apptainer version 1.3.2-1.el7
[2026-04-10 06:47:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-10 06:47:27] cg-vwn455.simple-grid.lan
[2026-04-10 06:47:27] apptainer works
[2026-04-10 06:47:27] Set ATHENA_PROC_NUMBER=8
[2026-04-10 06:47:27] Set ATHENA_CORE_NUMBER=8
[2026-04-10 06:47:27] Starting ATLAS job with PandaID=7085607212
[2026-04-10 06:47:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-10 17:13:01]  *** The last 200 lines of the pilot log: ***
[2026-04-10 17:13:01] 2026-04-10 15:11:53,350 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-10 17:13:01] 2026-04-10 15:11:53,351 | INFO     | log transfer has been attempted: DONE
[2026-04-10 17:13:01] 2026-04-10 15:11:53,351 | INFO     | job 7085607212 has finished - writing final server update
[2026-04-10 17:13:01] 2026-04-10 15:11:53,351 | INFO     | total number of processed events: 400 (read)
[2026-04-10 17:13:01] 2026-04-10 15:11:53,353 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7085607212/memory_monitor_summary.json (trf name=prmon)
[2026-04-10 17:13:01] 2026-04-10 15:11:53,354 | INFO     | extracted standard info from prmon json
[2026-04-10 17:13:01] 2026-04-10 15:11:53,354 | INFO     | extracted standard memory fields from prmon json
[2026-04-10 17:13:01] 2026-04-10 15:11:53,354 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-10 17:13:01] 2026-04-10 15:11:53,355 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-10 17:13:01] 2026-04-10 15:11:53,366 | INFO     | fitting pss+swap vs Time
[2026-04-10 17:13:01] 2026-04-10 15:11:53,367 | INFO     | sum of square deviations: 71077399653.0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,379 | INFO     | sum of deviations: 397002869237.99994
[2026-04-10 17:13:01] 2026-04-10 15:11:53,379 | INFO     | mean x (centered): 0.0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,380 | INFO     | mean y: 2480001.3464052286
[2026-04-10 17:13:01] 2026-04-10 15:11:53,380 | INFO     | intersect: 2480001.3464052286
[2026-04-10 17:13:01] 2026-04-10 15:11:53,381 | INFO     | chi2: 7.613065250688146
[2026-04-10 17:13:01] 2026-04-10 15:11:53,382 | INFO     | sum of square deviations: 69349497488.0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,393 | INFO     | sum of deviations: 433752037295.99994
[2026-04-10 17:13:01] 2026-04-10 15:11:53,393 | INFO     | mean x (centered): 0.0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,394 | INFO     | mean y: 2483220.6573311365
[2026-04-10 17:13:01] 2026-04-10 15:11:53,394 | INFO     | intersect: 2483220.6573311365
[2026-04-10 17:13:01] 2026-04-10 15:11:53,395 | INFO     | chi2: 6.861391491189666
[2026-04-10 17:13:01] 2026-04-10 15:11:53,395 | INFO     | current chi2=6.861391491189666 (change=9.873470602797427 %)
[2026-04-10 17:13:01] 2026-04-10 15:11:53,395 | INFO     | right removable region: 606
[2026-04-10 17:13:01] 2026-04-10 15:11:53,396 | INFO     | sum of square deviations: 69349497488.0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,407 | INFO     | sum of deviations: 178729216821.00003
[2026-04-10 17:13:01] 2026-04-10 15:11:53,408 | INFO     | mean x (centered): 0.0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,408 | INFO     | mean y: 2499260.4975288305
[2026-04-10 17:13:01] 2026-04-10 15:11:53,408 | INFO     | intersect: 2499260.4975288305
[2026-04-10 17:13:01] 2026-04-10 15:11:53,409 | INFO     | chi2: 2.9287126243004895
[2026-04-10 17:13:01] 2026-04-10 15:11:53,409 | INFO     | current chi2=2.9287126243004895 (change=61.53044105282347 %)
[2026-04-10 17:13:01] 2026-04-10 15:11:53,410 | INFO     | sum of square deviations: 67649828410.5
[2026-04-10 17:13:01] 2026-04-10 15:11:53,421 | INFO     | sum of deviations: 39169300571.49997
[2026-04-10 17:13:01] 2026-04-10 15:11:53,422 | INFO     | mean x (centered): 0.0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,422 | INFO     | mean y: 2511764.0481727575
[2026-04-10 17:13:01] 2026-04-10 15:11:53,422 | INFO     | intersect: 2511764.0481727575
[2026-04-10 17:13:01] 2026-04-10 15:11:53,423 | INFO     | chi2: 0.8839079104381337
[2026-04-10 17:13:01] 2026-04-10 15:11:53,423 | INFO     | current chi2=0.8839079104381337 (change=69.8192337785531 %)
[2026-04-10 17:13:01] 2026-04-10 15:11:53,424 | INFO     | sum of square deviations: 65978159858.0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,435 | INFO     | sum of deviations: 23116073708.000008
[2026-04-10 17:13:01] 2026-04-10 15:11:53,435 | INFO     | mean x (centered): 0.0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,435 | INFO     | mean y: 2513224.753768844
[2026-04-10 17:13:01] 2026-04-10 15:11:53,436 | INFO     | intersect: 2513224.753768844
[2026-04-10 17:13:01] 2026-04-10 15:11:53,437 | INFO     | chi2: 0.8532476013283558
[2026-04-10 17:13:01] 2026-04-10 15:11:53,437 | INFO     | current chi2=0.8532476013283558 (change=3.4687221086844064 %)
[2026-04-10 17:13:01] 2026-04-10 15:11:53,437 | INFO     | left removable region: 15
[2026-04-10 17:13:01] 2026-04-10 15:11:53,438 | INFO     | sum of square deviations: 64008790840.0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,449 | INFO     | sum of deviations: 61793190502.99999
[2026-04-10 17:13:01] 2026-04-10 15:11:53,449 | INFO     | mean x (centered): 0.0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,449 | INFO     | mean y: 2516787.2351945853
[2026-04-10 17:13:01] 2026-04-10 15:11:53,449 | INFO     | intersect: 2516787.2351945853
[2026-04-10 17:13:01] 2026-04-10 15:11:53,450 | INFO     | chi2: 0.06916834348945512
[2026-04-10 17:13:01] 2026-04-10 15:11:53,450 | INFO     | current memory leak: 0.97 B/s (using 591 data points, chi2=0.07)
[2026-04-10 17:13:01] 2026-04-10 15:11:53,451 | INFO     | could have reported an average CPU frequency of 2250 MHz (24 samples)
[2026-04-10 17:13:01] 2026-04-10 15:11:53,451 | INFO     | ..............................
[2026-04-10 17:13:01] 2026-04-10 15:11:53,452 | INFO     | . Timing measurements:
[2026-04-10 17:13:01] 2026-04-10 15:11:53,452 | INFO     | . get job = 0 s
[2026-04-10 17:13:01] 2026-04-10 15:11:53,452 | INFO     | . initial setup = 21 s
[2026-04-10 17:13:01] 2026-04-10 15:11:53,452 | INFO     | . payload setup = 58 s
[2026-04-10 17:13:01] 2026-04-10 15:11:53,452 | INFO     | . stage-in = 0 s
[2026-04-10 17:13:01] 2026-04-10 15:11:53,452 | INFO     | . payload execution = 37315 s
[2026-04-10 17:13:01] 2026-04-10 15:11:53,452 | INFO     | . stage-out = 1 s
[2026-04-10 17:13:01] 2026-04-10 15:11:53,452 | INFO     | . log creation = 0 s
[2026-04-10 17:13:01] 2026-04-10 15:11:53,452 | INFO     | ..............................
[2026-04-10 17:13:01] 2026-04-10 15:11:53,567 | INFO     | 
[2026-04-10 17:13:01] 2026-04-10 15:11:53,567 | INFO     | job summary report
[2026-04-10 17:13:01] 2026-04-10 15:11:53,567 | INFO     | --------------------------------------------------
[2026-04-10 17:13:01] 2026-04-10 15:11:53,568 | INFO     | PanDA job id: 7085607212
[2026-04-10 17:13:01] 2026-04-10 15:11:53,568 | INFO     | task id: 49176206
[2026-04-10 17:13:01] 2026-04-10 15:11:53,568 | INFO     | errors: (none)
[2026-04-10 17:13:01] 2026-04-10 15:11:53,568 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-10 17:13:01] 2026-04-10 15:11:53,568 | INFO     | pilot state: finished 
[2026-04-10 17:13:01] 2026-04-10 15:11:53,570 | INFO     | transexitcode: 0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,570 | INFO     | exeerrorcode: 0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,570 | INFO     | exeerrordiag: 
[2026-04-10 17:13:01] 2026-04-10 15:11:53,570 | INFO     | exitcode: 0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,570 | INFO     | exitmsg: OK
[2026-04-10 17:13:01] 2026-04-10 15:11:53,570 | INFO     | cpuconsumptiontime: 168229 s
[2026-04-10 17:13:01] 2026-04-10 15:11:53,570 | INFO     | nevents: 400
[2026-04-10 17:13:01] 2026-04-10 15:11:53,570 | INFO     | neventsw: 0
[2026-04-10 17:13:01] 2026-04-10 15:11:53,571 | INFO     | pid: 29339
[2026-04-10 17:13:01] 2026-04-10 15:11:53,571 | INFO     | pgrp: 29339
[2026-04-10 17:13:01] 2026-04-10 15:11:53,571 | INFO     | corecount: 8
[2026-04-10 17:13:01] 2026-04-10 15:11:53,571 | INFO     | event service: False
[2026-04-10 17:13:01] 2026-04-10 15:11:53,571 | INFO     | sizes: {0: 2279088, 1: 2281574, 2: 2281574, 37376: 2322667, 37377: 2322666, 37380: 2331720, 37382: 2332098}
[2026-04-10 17:13:01] 2026-04-10 15:11:53,571 | INFO     | --------------------------------------------------
[2026-04-10 17:13:01] 2026-04-10 15:11:53,571 | INFO     | 
[2026-04-10 17:13:01] 2026-04-10 15:11:53,571 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-04-10 17:13:01] 2026-04-10 15:11:53,611 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,611 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,612 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,612 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,612 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,612 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,612 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,612 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,612 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,612 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,613 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,613 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-10 17:13:01] 2026-04-10 15:11:53,613 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,614 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-10 17:13:01] 2026-04-10 15:11:53,614 | INFO     | job 7085607212 has completed (purged errors)
[2026-04-10 17:13:01] 2026-04-10 15:11:53,614 | INFO     | overall cleanup function is called
[2026-04-10 17:13:01] 2026-04-10 15:11:54,619 | INFO     | --- collectZombieJob: --- 10, [29339]
[2026-04-10 17:13:01] 2026-04-10 15:11:54,620 | INFO     | zombie collector waiting for pid 29339
[2026-04-10 17:13:01] 2026-04-10 15:11:54,620 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-10 17:13:01] 2026-04-10 15:11:54,620 | INFO     | collected zombie processes
[2026-04-10 17:13:01] 2026-04-10 15:11:54,620 | INFO     | will attempt to kill all subprocesses of pid=29339
[2026-04-10 17:13:01] 2026-04-10 15:11:54,686 | INFO     | process IDs to be killed: [29339] (in reverse order)
[2026-04-10 17:13:01] 2026-04-10 15:11:54,745 | WARNING  | found no corresponding commands to process id(s)
[2026-04-10 17:13:01] 2026-04-10 15:11:54,745 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-10 17:13:01] 2026-04-10 15:11:54,747 | INFO     | did not find any defunct processes belonging to 29339
[2026-04-10 17:13:01] 2026-04-10 15:11:54,749 | INFO     | did not find any defunct processes belonging to 29339
[2026-04-10 17:13:01] 2026-04-10 15:11:54,749 | INFO     | Ready for new job
[2026-04-10 17:13:01] 2026-04-10 15:11:54,752 | INFO     | **************************************
[2026-04-10 17:13:01] 2026-04-10 15:11:54,752 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-10 17:13:01] 2026-04-10 15:11:54,752 | INFO     | **************************************
[2026-04-10 17:13:01] 2026-04-10 15:11:54,752 | INFO     | 
[2026-04-10 17:13:01] 2026-04-10 15:11:54,753 | INFO     | pilot is running in a VM
[2026-04-10 17:13:01] 2026-04-10 15:11:54,753 | INFO     | architecture information:
[2026-04-10 17:13:01] 2026-04-10 15:11:54,753 | INFO     | executing command: cat /etc/os-release
[2026-04-10 17:13:01] 2026-04-10 15:11:54,770 | INFO     | cat /etc/os-release:
[2026-04-10 17:13:01] NAME="CentOS Linux"
[2026-04-10 17:13:01] VERSION="7 (Core)"
[2026-04-10 17:13:01] ID="centos"
[2026-04-10 17:13:01] ID_LIKE="rhel fedora"
[2026-04-10 17:13:01] VERSION_ID="7"
[2026-04-10 17:13:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-10 17:13:01] ANSI_COLOR="0;31"
[2026-04-10 17:13:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-10 17:13:01] HOME_URL="https://www.centos.org/"
[2026-04-10 17:13:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-10 17:13:01] 
[2026-04-10 17:13:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-10 17:13:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-10 17:13:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-10 17:13:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-10 17:13:01] 
[2026-04-10 17:13:01] 2026-04-10 15:11:54,771 | INFO     | **************************************
[2026-04-10 17:13:01] 2026-04-10 15:11:55,274 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-04-10 17:13:01] 2026-04-10 15:11:55,292 | INFO     | sufficient remaining disk space (497492688896 B)
[2026-04-10 17:13:01] 2026-04-10 15:11:55,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-10 17:13:01] 2026-04-10 15:11:55,292 | INFO     | current server update state: UPDATING_FINAL
[2026-04-10 17:13:01] 2026-04-10 15:11:55,293 | INFO     | update_server=False
[2026-04-10 17:13:01] 2026-04-10 15:11:55,293 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-10 17:13:01] 2026-04-10 15:11:55,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-10 17:13:01] 2026-04-10 15:11:55,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-10 17:13:01] 2026-04-10 15:11:55,294 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-10 17:13:01] 2026-04-10 15:11:55,294 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-10 17:13:01] 2026-04-10 15:11:55,296 | INFO     | aborting loop
[2026-04-10 17:13:01] 2026-04-10 15:11:55,803 | INFO     | all payload control threads have been joined
[2026-04-10 17:13:01] 2026-04-10 15:11:56,090 | INFO     | all job control threads have been joined
[2026-04-10 17:13:01] 2026-04-10 15:11:56,099 | INFO     | all data control threads have been joined
[2026-04-10 17:13:01] 2026-04-10 15:11:56,294 | INFO     | [job] retrieve thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:11:56,301 | INFO     | [job] queue monitor thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:11:56,302 | INFO     | [job] job monitor thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:11:56,479 | INFO     | [payload] failed_post thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:11:56,681 | INFO     | [payload] execute_payloads thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:11:56,809 | INFO     | [payload] control thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:11:57,095 | INFO     | [job] control thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:11:57,102 | INFO     | [data] control thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:11:57,151 | INFO     | [job] validate thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:11:57,291 | INFO     | [payload] validate_post thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:11:57,297 | INFO     | [data] copytool_out thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:11:57,334 | INFO     | [job] create_data_payload thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:11:57,649 | INFO     | [data] copytool_in thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:11:57,746 | INFO     | [payload] validate_pre thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:11:59,301 | INFO     | [data] queue_monitor thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:12:05,646 | INFO     | job.realtimelogging is not enabled
[2026-04-10 17:13:01] 2026-04-10 15:12:06,652 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-10 17:13:01] 2026-04-10 15:12:26,065 | INFO     | PID=22561 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-10 17:13:01] 2026-04-10 15:12:26,065 | INFO     | .. there are 2 such processes running
[2026-04-10 17:13:01] 2026-04-10 15:12:26,065 | INFO     | found 0 job(s) in 20 queues
[2026-04-10 17:13:01] 2026-04-10 15:12:26,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-10 17:13:01] 2026-04-10 15:12:26,066 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-10 17:13:01] 2026-04-10 15:12:54,417 | INFO     | [monitor] cgroup control has ended
[2026-04-10 17:13:01] 2026-04-10 15:12:55,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139975885653824)>', '<ExcThread(monitor, started 139974930331392)>']
[2026-04-10 17:13:01] 2026-04-10 15:12:56,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-10 17:13:01] 2026-04-10 15:12:56,213 | INFO     | [monitor] control thread has ended
[2026-04-10 17:13:01] 2026-04-10 15:13:00,649 | INFO     | all workflow threads have been joined
[2026-04-10 17:13:01] 2026-04-10 15:13:00,650 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-10 17:13:01] 2026-04-10 15:13:00,650 | INFO     | traces error code: 0
[2026-04-10 17:13:01] 2026-04-10 15:13:00,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-10 17:13:01] 2026-04-10 15:13:00,792 [wrapper] ==== pilot stdout END ====
[2026-04-10 17:13:01] 2026-04-10 15:13:00,797 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-10 17:13:01] 2026-04-10 15:13:00,801 [wrapper] pilotpid: 22561
[2026-04-10 17:13:01] 2026-04-10 15:13:00,805 [wrapper] Pilot exit status: 0
[2026-04-10 17:13:01] 2026-04-10 15:13:00,824 [wrapper] pandaids: 7085607212
[2026-04-10 17:13:01] 2026-04-10 15:13:00,868 [wrapper] cleanup supervisor_pilot  8965 22565
[2026-04-10 17:13:01] 2026-04-10 15:13:00,872 [wrapper] Test setup, not cleaning
[2026-04-10 17:13:01] 2026-04-10 15:13:00,886 [wrapper] apfmon messages muted
[2026-04-10 17:13:01] 2026-04-10 15:13:00,892 [wrapper] ==== wrapper stdout END ====
[2026-04-10 17:13:01] 2026-04-10 15:13:00,898 [wrapper] ==== wrapper stderr END ====
[2026-04-10 17:13:01]  *** Error codes and diagnostics ***
[2026-04-10 17:13:01]     "exeErrorCode": 0,
[2026-04-10 17:13:01]     "pilotErrorCode": 0,
[2026-04-10 17:13:01]  *** Listing of results directory ***
[2026-04-10 17:13:01] total 493744
[2026-04-10 17:13:01] -rw-r--r--. 1 boinc boinc    644190 Apr  9 22:03 pilot3.tar.gz
[2026-04-10 17:13:01] -rwx------. 1 boinc boinc     36322 Apr  9 22:49 runpilot2-wrapper.sh
[2026-04-10 17:13:01] -rw-r--r--. 1 boinc boinc      5094 Apr  9 22:49 queuedata.json
[2026-04-10 17:13:01] -rw-r--r--. 1 boinc boinc       100 Apr 10 06:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-10 17:13:01] -rwxr-xr-x. 1 boinc boinc      7986 Apr 10 06:47 run_atlas
[2026-04-10 17:13:01] -rw-r--r--. 1 boinc boinc       105 Apr 10 06:47 job.xml
[2026-04-10 17:13:01] -rw-r--r--. 1 boinc boinc      6307 Apr 10 06:47 init_data.xml
[2026-04-10 17:13:01] -rw-r--r--. 2 boinc boinc 246932428 Apr 10 06:47 EVNT.49133006._000004.pool.root.1
[2026-04-10 17:13:01] -rw-r--r--. 2 boinc boinc     15665 Apr 10 06:47 start_atlas.sh
[2026-04-10 17:13:01] drwxrwx--x. 2 boinc boinc        68 Apr 10 06:47 shared
[2026-04-10 17:13:01] -rw-r--r--. 2 boinc boinc    656929 Apr 10 06:47 input.tar.gz
[2026-04-10 17:13:01] -rw-r--r--. 1 boinc boinc         0 Apr 10 06:47 boinc_lockfile
[2026-04-10 17:13:01] -rw-r--r--. 1 boinc boinc      2597 Apr 10 06:47 pandaJob.out
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc    997876 Apr 10 06:48 agis_schedconf.cvmfs.json
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc       413 Apr 10 06:48 workernode_map.json
[2026-04-10 17:13:01] drwx------. 5 boinc boinc      4096 Apr 10 06:48 pilot3
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc 246476327 Apr 10 17:11 HITS.49176206._001520.pool.root.1
[2026-04-10 17:13:01] -rw-r--r--. 1 boinc boinc       490 Apr 10 17:11 boinc_task_state.xml
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc      1011 Apr 10 17:11 memory_monitor_summary.json
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc        95 Apr 10 17:11 pilot_heartbeat.json
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc   1511579 Apr 10 17:11 agis_ddmendpoints.agis.ALL.json
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc    621923 Apr 10 17:11 log.49176206._001520.job.log.tgz.1
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc      6326 Apr 10 17:11 heartbeat_new.json
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc      6217 Apr 10 17:11 heartbeat.json
[2026-04-10 17:13:01] -rw-r--r--. 1 boinc boinc      8192 Apr 10 17:12 boinc_mmap_file
[2026-04-10 17:13:01] -rw-r--r--. 1 boinc boinc        29 Apr 10 17:12 wrapper_checkpoint.txt
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc      4951 Apr 10 17:13 pilotlog.txt
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc   3449365 Apr 10 17:13 log.49176206._001520.job.log.1
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc       357 Apr 10 17:13 output.list
[2026-04-10 17:13:01] -rw-r--r--. 1 boinc boinc       410 Apr 10 17:13 runtime_log
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc   4085760 Apr 10 17:13 result.tar.gz
[2026-04-10 17:13:01] -rw-r--r--. 1 boinc boinc      8438 Apr 10 17:13 runtime_log.err
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc       658 Apr 10 17:13 10e8ce00ee25.diag
[2026-04-10 17:13:01] -rw-r--r--. 1 boinc boinc     20630 Apr 10 17:13 stderr.txt
[2026-04-10 17:13:01] HITS file was successfully produced:
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc 246476327 Apr 10 17:11 shared/HITS.pool.root.1
[2026-04-10 17:13:01]  *** Contents of shared directory: ***
[2026-04-10 17:13:01] total 486500
[2026-04-10 17:13:01] -rw-r--r--. 2 boinc boinc 246932428 Apr 10 06:47 ATLAS.root_0
[2026-04-10 17:13:01] -rw-r--r--. 2 boinc boinc     15665 Apr 10 06:47 start_atlas.sh
[2026-04-10 17:13:01] -rw-r--r--. 2 boinc boinc    656929 Apr 10 06:47 input.tar.gz
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc 246476327 Apr 10 17:11 HITS.pool.root.1
[2026-04-10 17:13:01] -rw-------. 1 boinc boinc   4085760 Apr 10 17:13 result.tar.gz
17:13:02 (17200): run_atlas exited; CPU time 168615.242004
17:13:02 (17200): called boinc_finish(0)

</stderr_txt>
]]>

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