Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:53:52 (2519935): wrapper (7.7.26015): starting
01:53:52 (2519935): wrapper: running run_atlas (--nthreads 4)
[2026-04-10 01:53:52] Arguments: --nthreads 4
[2026-04-10 01:53:52] Threads: 4
[2026-04-10 01:53:52] Checking for CVMFS
[2026-04-10 01:53:52] No cvmfs_config command found, will try listing directly
[2026-04-10 01:53:52] CVMFS is ok
[2026-04-10 01:53:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-10 01:53:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-10 01:53:52] Further information can be found at the LHC@home message board.
[2026-04-10 01:53:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-10 01:53:52] Checking for apptainer binary...
[2026-04-10 01:53:52] which: no apptainer in ((null))
[2026-04-10 01:53:52] apptainer is not installed, using version from CVMFS
[2026-04-10 01:53:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-10 01:53:52] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-04-10 01:53:52] apptainer works
[2026-04-10 01:53:52] Set ATHENA_PROC_NUMBER=4
[2026-04-10 01:53:52] Set ATHENA_CORE_NUMBER=4
[2026-04-10 01:53:52] Starting ATLAS job with PandaID=7085011451
[2026-04-10 01:53:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-10 10:38:05]  *** The last 200 lines of the pilot log: ***
[2026-04-10 10:38:05] 2026-04-10 08:37:07,549 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-10 10:38:05] 2026-04-10 08:37:07,889 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-10 10:38:05] 2026-04-10 08:37:07,981 | INFO     | job 7085011451 has state=finished
[2026-04-10 10:38:05] 2026-04-10 08:37:07,982 | INFO     | preparing for final server update for job 7085011451 in state='finished'
[2026-04-10 10:38:05] 2026-04-10 08:37:08,792 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-10 10:38:05] 2026-04-10 08:37:08,793 | INFO     | reading metadata from: /var/lib/boinc/var/slot28/slots/3/PanDA_Pilot-7085011451/jobReport.json
[2026-04-10 10:38:05] 2026-04-10 08:37:08,796 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot28/slots/3/workernode_map.json
[2026-04-10 10:38:05] 2026-04-10 08:37:08,796 | INFO     | this job has now completed (state=finished)
[2026-04-10 10:38:05] 2026-04-10 08:37:08,797 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-10 10:38:05] 2026-04-10 08:37:08,797 | INFO     | log transfer has been attempted: DONE
[2026-04-10 10:38:05] 2026-04-10 08:37:08,797 | INFO     | job 7085011451 has finished - writing final server update
[2026-04-10 10:38:05] 2026-04-10 08:37:08,797 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1034457/.job.ad'
[2026-04-10 10:38:05] 2026-04-10 08:37:08,797 | INFO     | total number of processed events: 400 (read)
[2026-04-10 10:38:05] 2026-04-10 08:37:08,809 | INFO     | using path: /var/lib/boinc/var/slot28/slots/3/PanDA_Pilot-7085011451/memory_monitor_summary.json (trf name=prmon)
[2026-04-10 10:38:05] 2026-04-10 08:37:08,810 | INFO     | extracted standard info from prmon json
[2026-04-10 10:38:05] 2026-04-10 08:37:08,810 | INFO     | extracted standard memory fields from prmon json
[2026-04-10 10:38:05] 2026-04-10 08:37:08,810 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-10 10:38:05] 2026-04-10 08:37:08,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-10 10:38:05] 2026-04-10 08:37:08,820 | INFO     | fitting pss+swap vs Time
[2026-04-10 10:38:05] 2026-04-10 08:37:08,821 | INFO     | sum of square deviations: 42108147652.5
[2026-04-10 10:38:05] 2026-04-10 08:37:08,826 | INFO     | sum of deviations: 97541389339.49998
[2026-04-10 10:38:05] 2026-04-10 08:37:08,826 | INFO     | mean x (centered): 0.0
[2026-04-10 10:38:05] 2026-04-10 08:37:08,826 | INFO     | mean y: 2340631.5155642023
[2026-04-10 10:38:05] 2026-04-10 08:37:08,826 | INFO     | intersect: 2340631.5155642023
[2026-04-10 10:38:05] 2026-04-10 08:37:08,827 | INFO     | chi2: 1.3360065235092076
[2026-04-10 10:38:05] 2026-04-10 08:37:08,828 | INFO     | sum of square deviations: 40891222510.0
[2026-04-10 10:38:05] 2026-04-10 08:37:08,834 | INFO     | sum of deviations: 95754537476.00003
[2026-04-10 10:38:05] 2026-04-10 08:37:08,834 | INFO     | mean x (centered): 0.0
[2026-04-10 10:38:05] 2026-04-10 08:37:08,834 | INFO     | mean y: 2340407.5933202356
[2026-04-10 10:38:05] 2026-04-10 08:37:08,834 | INFO     | intersect: 2340407.5933202356
[2026-04-10 10:38:05] 2026-04-10 08:37:08,835 | INFO     | chi2: 1.3361331149429387
[2026-04-10 10:38:05] 2026-04-10 08:37:08,835 | INFO     | current chi2=1.3361331149429387 (change=-0.00947536044948802 %)
[2026-04-10 10:38:05] 2026-04-10 08:37:08,835 | INFO     | right removable region: 508
[2026-04-10 10:38:05] 2026-04-10 08:37:08,836 | INFO     | sum of square deviations: 40891222510.0
[2026-04-10 10:38:05] 2026-04-10 08:37:08,841 | INFO     | sum of deviations: 29474380038.000004
[2026-04-10 10:38:05] 2026-04-10 08:37:08,842 | INFO     | mean x (centered): 0.0
[2026-04-10 10:38:05] 2026-04-10 08:37:08,842 | INFO     | mean y: 2349119.9076620825
[2026-04-10 10:38:05] 2026-04-10 08:37:08,855 | INFO     | intersect: 2349119.9076620825
[2026-04-10 10:38:05] 2026-04-10 08:37:08,856 | INFO     | chi2: 0.02153568454364054
[2026-04-10 10:38:05] 2026-04-10 08:37:08,856 | INFO     | current chi2=0.02153568454364054 (change=98.38805543500835 %)
[2026-04-10 10:38:05] 2026-04-10 08:37:08,857 | INFO     | sum of square deviations: 39697972230.0
[2026-04-10 10:38:05] 2026-04-10 08:37:08,862 | INFO     | sum of deviations: 23678742466.0
[2026-04-10 10:38:05] 2026-04-10 08:37:08,863 | INFO     | mean x (centered): 0.0
[2026-04-10 10:38:05] 2026-04-10 08:37:08,863 | INFO     | mean y: 2349860.5317460317
[2026-04-10 10:38:05] 2026-04-10 08:37:08,863 | INFO     | intersect: 2349860.5317460317
[2026-04-10 10:38:05] 2026-04-10 08:37:08,864 | INFO     | chi2: 0.017649317428257753
[2026-04-10 10:38:05] 2026-04-10 08:37:08,864 | INFO     | current chi2=0.017649317428257753 (change=18.046174048971324 %)
[2026-04-10 10:38:05] 2026-04-10 08:37:08,864 | INFO     | left removable region: 10
[2026-04-10 10:38:05] 2026-04-10 08:37:08,865 | INFO     | sum of square deviations: 38296995264.5
[2026-04-10 10:38:05] 2026-04-10 08:37:08,870 | INFO     | sum of deviations: 22428365045.500004
[2026-04-10 10:38:05] 2026-04-10 08:37:08,870 | INFO     | mean x (centered): 0.0
[2026-04-10 10:38:05] 2026-04-10 08:37:08,870 | INFO     | mean y: 2349697.202811245
[2026-04-10 10:38:05] 2026-04-10 08:37:08,871 | INFO     | intersect: 2349697.202811245
[2026-04-10 10:38:05] 2026-04-10 08:37:08,871 | INFO     | chi2: 0.017624800531701575
[2026-04-10 10:38:05] 2026-04-10 08:37:08,872 | INFO     | current memory leak: 0.59 B/s (using 498 data points, chi2=0.02)
[2026-04-10 10:38:05] 2026-04-10 08:37:08,872 | INFO     | could have reported an average CPU frequency of 2654 MHz (21 samples)
[2026-04-10 10:38:05] 2026-04-10 08:37:08,873 | INFO     | ..............................
[2026-04-10 10:38:05] 2026-04-10 08:37:08,873 | INFO     | . Timing measurements:
[2026-04-10 10:38:05] 2026-04-10 08:37:08,873 | INFO     | . get job = 0 s
[2026-04-10 10:38:05] 2026-04-10 08:37:08,873 | INFO     | . initial setup = 5 s
[2026-04-10 10:38:05] 2026-04-10 08:37:08,873 | INFO     | . payload setup = 10 s
[2026-04-10 10:38:05] 2026-04-10 08:37:08,873 | INFO     | . stage-in = 0 s
[2026-04-10 10:38:05] 2026-04-10 08:37:08,873 | INFO     | . payload execution = 31350 s
[2026-04-10 10:38:05] 2026-04-10 08:37:08,873 | INFO     | . stage-out = 1 s
[2026-04-10 10:38:05] 2026-04-10 08:37:08,873 | INFO     | . log creation = 0 s
[2026-04-10 10:38:05] 2026-04-10 08:37:08,873 | INFO     | ..............................
[2026-04-10 10:38:05] 2026-04-10 08:37:09,133 | INFO     | 
[2026-04-10 10:38:05] 2026-04-10 08:37:09,133 | INFO     | job summary report
[2026-04-10 10:38:05] 2026-04-10 08:37:09,134 | INFO     | --------------------------------------------------
[2026-04-10 10:38:05] 2026-04-10 08:37:09,134 | INFO     | PanDA job id: 7085011451
[2026-04-10 10:38:05] 2026-04-10 08:37:09,134 | INFO     | task id: 49515157
[2026-04-10 10:38:05] 2026-04-10 08:37:09,134 | INFO     | errors: (none)
[2026-04-10 10:38:05] 2026-04-10 08:37:09,134 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-10 10:38:05] 2026-04-10 08:37:09,134 | INFO     | pilot state: finished 
[2026-04-10 10:38:05] 2026-04-10 08:37:09,134 | INFO     | transexitcode: 0
[2026-04-10 10:38:05] 2026-04-10 08:37:09,134 | INFO     | exeerrorcode: 0
[2026-04-10 10:38:05] 2026-04-10 08:37:09,134 | INFO     | exeerrordiag: 
[2026-04-10 10:38:05] 2026-04-10 08:37:09,134 | INFO     | exitcode: 0
[2026-04-10 10:38:05] 2026-04-10 08:37:09,134 | INFO     | exitmsg: OK
[2026-04-10 10:38:05] 2026-04-10 08:37:09,135 | INFO     | cpuconsumptiontime: 121932 s
[2026-04-10 10:38:05] 2026-04-10 08:37:09,135 | INFO     | nevents: 400
[2026-04-10 10:38:05] 2026-04-10 08:37:09,135 | INFO     | neventsw: 0
[2026-04-10 10:38:05] 2026-04-10 08:37:09,135 | INFO     | pid: 2528994
[2026-04-10 10:38:05] 2026-04-10 08:37:09,135 | INFO     | pgrp: 2528994
[2026-04-10 10:38:05] 2026-04-10 08:37:09,135 | INFO     | corecount: 4
[2026-04-10 10:38:05] 2026-04-10 08:37:09,136 | INFO     | event service: False
[2026-04-10 10:38:05] 2026-04-10 08:37:09,136 | INFO     | sizes: {0: 2281472, 11: 2281472, 31364: 2319817, 31366: 2328837, 31367: 2328893, 31368: 2329087}
[2026-04-10 10:38:05] 2026-04-10 08:37:09,136 | INFO     | --------------------------------------------------
[2026-04-10 10:38:05] 2026-04-10 08:37:09,136 | INFO     | 
[2026-04-10 10:38:05] 2026-04-10 08:37:09,136 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/3
[2026-04-10 10:38:05] 2026-04-10 08:37:09,156 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,157 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,157 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,157 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,158 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,158 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,158 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,158 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,158 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,158 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-10 10:38:05] 2026-04-10 08:37:09,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,158 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-10 10:38:05] 2026-04-10 08:37:09,158 | INFO     | job 7085011451 has completed (purged errors)
[2026-04-10 10:38:05] 2026-04-10 08:37:09,158 | INFO     | overall cleanup function is called
[2026-04-10 10:38:05] 2026-04-10 08:37:10,167 | INFO     | --- collectZombieJob: --- 10, [2528994]
[2026-04-10 10:38:05] 2026-04-10 08:37:10,167 | INFO     | zombie collector waiting for pid 2528994
[2026-04-10 10:38:05] 2026-04-10 08:37:10,167 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-10 10:38:05] 2026-04-10 08:37:10,167 | INFO     | collected zombie processes
[2026-04-10 10:38:05] 2026-04-10 08:37:10,167 | INFO     | will attempt to kill all subprocesses of pid=2528994
[2026-04-10 10:38:05] 2026-04-10 08:37:10,550 | INFO     | process IDs to be killed: [2528994] (in reverse order)
[2026-04-10 10:38:05] 2026-04-10 08:37:10,672 | WARNING  | found no corresponding commands to process id(s)
[2026-04-10 10:38:05] 2026-04-10 08:37:10,673 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-10 10:38:05] 2026-04-10 08:37:10,684 | INFO     | did not find any defunct processes belonging to 2528994
[2026-04-10 10:38:05] 2026-04-10 08:37:10,696 | INFO     | did not find any defunct processes belonging to 2528994
[2026-04-10 10:38:05] 2026-04-10 08:37:10,696 | INFO     | Ready for new job
[2026-04-10 10:38:05] 2026-04-10 08:37:10,699 | INFO     | **************************************
[2026-04-10 10:38:05] 2026-04-10 08:37:10,699 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-10 10:38:05] 2026-04-10 08:37:10,700 | INFO     | **************************************
[2026-04-10 10:38:05] 2026-04-10 08:37:10,700 | INFO     | 
[2026-04-10 10:38:05] 2026-04-10 08:37:10,703 | INFO     | architecture information:
[2026-04-10 10:38:05] 2026-04-10 08:37:10,704 | INFO     | executing command: cat /etc/os-release
[2026-04-10 10:38:05] 2026-04-10 08:37:10,719 | INFO     | cat /etc/os-release:
[2026-04-10 10:38:05] NAME="CentOS Linux"
[2026-04-10 10:38:05] VERSION="7 (Core)"
[2026-04-10 10:38:05] ID="centos"
[2026-04-10 10:38:05] ID_LIKE="rhel fedora"
[2026-04-10 10:38:05] VERSION_ID="7"
[2026-04-10 10:38:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-10 10:38:05] ANSI_COLOR="0;31"
[2026-04-10 10:38:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-10 10:38:05] HOME_URL="https://www.centos.org/"
[2026-04-10 10:38:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-10 10:38:05] 
[2026-04-10 10:38:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-10 10:38:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-10 10:38:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-10 10:38:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-10 10:38:05] 
[2026-04-10 10:38:05] 2026-04-10 08:37:10,719 | INFO     | **************************************
[2026-04-10 10:38:05] 2026-04-10 08:37:11,222 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/3
[2026-04-10 10:38:05] 2026-04-10 08:37:11,240 | INFO     | sufficient remaining disk space (32049725440 B)
[2026-04-10 10:38:05] 2026-04-10 08:37:11,240 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-10 10:38:05] 2026-04-10 08:37:11,241 | INFO     | current server update state: UPDATING_FINAL
[2026-04-10 10:38:05] 2026-04-10 08:37:11,241 | INFO     | update_server=False
[2026-04-10 10:38:05] 2026-04-10 08:37:11,241 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-10 10:38:05] 2026-04-10 08:37:11,241 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-10 10:38:05] 2026-04-10 08:37:11,241 | INFO     | aborting loop
[2026-04-10 10:38:05] 2026-04-10 08:37:11,245 | INFO     | all job control threads have been joined
[2026-04-10 10:38:05] 2026-04-10 08:37:11,515 | INFO     | all data control threads have been joined
[2026-04-10 10:38:05] 2026-04-10 08:37:12,246 | INFO     | [job] retrieve thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:12,247 | INFO     | [job] job monitor thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:12,250 | INFO     | [job] control thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:12,338 | INFO     | [payload] validate_post thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:12,341 | INFO     | [payload] validate_pre thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:12,439 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-10 10:38:05] 2026-04-10 08:37:12,448 | INFO     | all payload control threads have been joined
[2026-04-10 10:38:05] 2026-04-10 08:37:12,520 | INFO     | [data] control thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:12,598 | INFO     | [data] copytool_in thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:13,111 | INFO     | [payload] failed_post thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:13,422 | INFO     | [job] validate thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:13,431 | INFO     | [payload] execute_payloads thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:13,451 | INFO     | [payload] control thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:13,542 | INFO     | [job] create_data_payload thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:13,691 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:13,975 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-10 10:38:05] 2026-04-10 08:37:13,987 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-10 10:38:05] 2026-04-10 08:37:14,445 | INFO     | [data] copytool_out thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:14,980 | INFO     | [job] queue monitor thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:17,992 | INFO     | [data] queue_monitor thread has finished
[2026-04-10 10:38:05] 2026-04-10 08:37:42,444 | INFO     | PID=2524109 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-10 10:38:05] 2026-04-10 08:37:42,444 | INFO     | .. there are 11 such processes running
[2026-04-10 10:38:05] 2026-04-10 08:37:42,444 | INFO     | found 0 job(s) in 20 queues
[2026-04-10 10:38:05] 2026-04-10 08:37:42,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-10 10:38:05] 2026-04-10 08:37:42,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-10 10:38:05] 2026-04-10 08:37:59,692 | INFO     | [monitor] cgroup control has ended
[2026-04-10 10:38:05] 2026-04-10 08:38:00,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22603210278720)>', '<ExcThread(monitor, started 22602973464320)>']
[2026-04-10 10:38:05] 2026-04-10 08:38:00,529 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-10 10:38:05] 2026-04-10 08:38:00,529 | INFO     | [monitor] control thread has ended
[2026-04-10 10:38:05] 2026-04-10 08:38:05,104 | INFO     | all workflow threads have been joined
[2026-04-10 10:38:05] 2026-04-10 08:38:05,104 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-10 10:38:05] 2026-04-10 08:38:05,104 | INFO     | traces error code: 0
[2026-04-10 10:38:05] 2026-04-10 08:38:05,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-10 10:38:05] 2026-04-10 08:38:05,278 [wrapper] ==== pilot stdout END ====
[2026-04-10 10:38:05] 2026-04-10 08:38:05,282 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-10 10:38:05] 2026-04-10 08:38:05,284 [wrapper] pilotpid: 2524109
[2026-04-10 10:38:05] 2026-04-10 08:38:05,287 [wrapper] Pilot exit status: 0
[2026-04-10 10:38:05] 2026-04-10 08:38:05,298 [wrapper] pandaids: 7085011451
[2026-04-10 10:38:05] 2026-04-10 08:38:05,374 [wrapper] cleanup supervisor_pilot 3037376 2524110
[2026-04-10 10:38:05] 2026-04-10 08:38:05,377 [wrapper] Test setup, not cleaning
[2026-04-10 10:38:05] 2026-04-10 08:38:05,380 [wrapper] apfmon messages muted
[2026-04-10 10:38:05] 2026-04-10 08:38:05,383 [wrapper] ==== wrapper stdout END ====
[2026-04-10 10:38:05] 2026-04-10 08:38:05,386 [wrapper] ==== wrapper stderr END ====
[2026-04-10 10:38:05]  *** Error codes and diagnostics ***
[2026-04-10 10:38:05]     "exeErrorCode": 0,
[2026-04-10 10:38:05]     "pilotErrorCode": 0,
[2026-04-10 10:38:05]  *** Listing of results directory ***
[2026-04-10 10:38:05] total 489280
[2026-04-10 10:38:05] -rwx------. 1 boinc boinc     36322 Apr  9 20:42 runpilot2-wrapper.sh
[2026-04-10 10:38:05] -rw-r--r--. 1 boinc boinc    644190 Apr  9 21:15 pilot3.tar.gz
[2026-04-10 10:38:05] -rw-r--r--. 1 boinc boinc      5094 Apr  9 21:30 queuedata.json
[2026-04-10 10:38:05] -rw-r--r--. 1 boinc boinc       100 Apr 10 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-10 10:38:05] -rwxr-xr-x. 1 boinc boinc      7986 Apr 10 01:53 run_atlas
[2026-04-10 10:38:05] -rw-r--r--. 1 boinc boinc       105 Apr 10 01:53 job.xml
[2026-04-10 10:38:05] -rw-r--r--. 2 boinc boinc 241443318 Apr 10 01:53 EVNT.49515154._000019.pool.root.1
[2026-04-10 10:38:05] -rw-r--r--. 1 boinc boinc      6482 Apr 10 01:53 init_data.xml
[2026-04-10 10:38:05] -rw-r--r--. 2 boinc boinc     15665 Apr 10 01:53 start_atlas.sh
[2026-04-10 10:38:05] drwxrwx--x. 2 boinc boinc      4096 Apr 10 01:53 shared
[2026-04-10 10:38:05] -rw-r--r--. 2 boinc boinc    656931 Apr 10 01:53 input.tar.gz
[2026-04-10 10:38:05] -rw-r--r--. 1 boinc boinc         0 Apr 10 01:53 boinc_lockfile
[2026-04-10 10:38:05] -rw-r--r--. 1 boinc boinc      2607 Apr 10 01:53 pandaJob.out
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc    997884 Apr 10 01:54 agis_schedconf.cvmfs.json
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc       452 Apr 10 01:54 workernode_map.json
[2026-04-10 10:38:05] drwx------. 5 boinc boinc      4096 Apr 10 01:54 pilot3
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc 248777286 Apr 10 10:36 HITS.49515157._000730.pool.root.1
[2026-04-10 10:38:05] -rw-r--r--. 1 boinc boinc       488 Apr 10 10:36 boinc_task_state.xml
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc      1036 Apr 10 10:37 memory_monitor_summary.json
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc   1511579 Apr 10 10:37 agis_ddmendpoints.agis.ALL.json
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc    495041 Apr 10 10:37 log.49515157._000730.job.log.tgz.1
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc        95 Apr 10 10:37 pilot_heartbeat.json
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc      6424 Apr 10 10:37 heartbeat_new.json
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc      6315 Apr 10 10:37 heartbeat.json
[2026-04-10 10:38:05] -rw-r--r--. 1 boinc boinc      8192 Apr 10 10:37 boinc_mmap_file
[2026-04-10 10:38:05] -rw-r--r--. 1 boinc boinc        28 Apr 10 10:37 wrapper_checkpoint.txt
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc      4828 Apr 10 10:38 pilotlog.txt
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc   2875714 Apr 10 10:38 log.49515157._000730.job.log.1
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc       357 Apr 10 10:38 output.list
[2026-04-10 10:38:05] -rw-r--r--. 1 boinc boinc       410 Apr 10 10:38 runtime_log
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc   3389440 Apr 10 10:38 result.tar.gz
[2026-04-10 10:38:05] -rw-r--r--. 1 boinc boinc      8827 Apr 10 10:38 runtime_log.err
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc       667 Apr 10 10:38 f3105ed62daa.diag
[2026-04-10 10:38:05] -rw-r--r--. 1 boinc boinc     21106 Apr 10 10:38 stderr.txt
[2026-04-10 10:38:05] HITS file was successfully produced:
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc 248777286 Apr 10 10:36 shared/HITS.pool.root.1
[2026-04-10 10:38:05]  *** Contents of shared directory: ***
[2026-04-10 10:38:05] total 482712
[2026-04-10 10:38:05] -rw-r--r--. 2 boinc boinc 241443318 Apr 10 01:53 ATLAS.root_0
[2026-04-10 10:38:05] -rw-r--r--. 2 boinc boinc     15665 Apr 10 01:53 start_atlas.sh
[2026-04-10 10:38:05] -rw-r--r--. 2 boinc boinc    656931 Apr 10 01:53 input.tar.gz
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc 248777286 Apr 10 10:36 HITS.pool.root.1
[2026-04-10 10:38:05] -rw-------. 1 boinc boinc   3389440 Apr 10 10:38 result.tar.gz
10:38:07 (2519935): run_atlas exited; CPU time 123396.460832
10:38:07 (2519935): called boinc_finish(0)

</stderr_txt>
]]>

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