Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:00:43 (333088): wrapper (7.7.26015): starting
03:00:43 (333088): wrapper: running run_atlas (--nthreads 4)
[2026-04-11 03:00:43] Arguments: --nthreads 4
[2026-04-11 03:00:43] Threads: 4
[2026-04-11 03:00:43] Checking for CVMFS
[2026-04-11 03:00:43] No cvmfs_config command found, will try listing directly
[2026-04-11 03:00:43] CVMFS is ok
[2026-04-11 03:00:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-11 03:00:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-11 03:00:43] Further information can be found at the LHC@home message board.
[2026-04-11 03:00:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-11 03:00:43] Checking for apptainer binary...
[2026-04-11 03:00:43] which: no apptainer in ((null))
[2026-04-11 03:00:43] apptainer is not installed, using version from CVMFS
[2026-04-11 03:00:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-11 03:00:43] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-04-11 03:00:43] apptainer works
[2026-04-11 03:00:43] Set ATHENA_PROC_NUMBER=4
[2026-04-11 03:00:43] Set ATHENA_CORE_NUMBER=4
[2026-04-11 03:00:43] Starting ATLAS job with PandaID=7074345402
[2026-04-11 03:00:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 06:09:39]  *** The last 200 lines of the pilot log: ***
[2026-04-11 06:09:39] 2026-04-11 04:09:06,650 | INFO     | sum of deviations: 25797828359.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,650 | INFO     | mean x (centered): 0.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,650 | INFO     | mean y: 2326981.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,650 | INFO     | intersect: 2326981.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,651 | INFO     | chi2: 1.3637604202692797
[2026-04-11 06:09:39] 2026-04-11 04:09:06,651 | INFO     | sum of square deviations: 1808350185.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,652 | INFO     | sum of deviations: 25051768560.5
[2026-04-11 06:09:39] 2026-04-11 04:09:06,652 | INFO     | mean x (centered): 0.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,653 | INFO     | mean y: 2326246.472222222
[2026-04-11 06:09:39] 2026-04-11 04:09:06,653 | INFO     | intersect: 2326246.472222222
[2026-04-11 06:09:39] 2026-04-11 04:09:06,653 | INFO     | chi2: 1.3645118361210864
[2026-04-11 06:09:39] 2026-04-11 04:09:06,653 | INFO     | current chi2=1.3645118361210864 (change=-0.055098816525144784 %)
[2026-04-11 06:09:39] 2026-04-11 04:09:06,653 | INFO     | right removable region: 179
[2026-04-11 06:09:39] 2026-04-11 04:09:06,653 | INFO     | sum of square deviations: 1808350185.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,655 | INFO     | sum of deviations: 1148800678.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,655 | INFO     | mean x (centered): 0.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,655 | INFO     | mean y: 2350920.811111111
[2026-04-11 06:09:39] 2026-04-11 04:09:06,655 | INFO     | intersect: 2350920.811111111
[2026-04-11 06:09:39] 2026-04-11 04:09:06,655 | INFO     | chi2: 0.005988974711790981
[2026-04-11 06:09:39] 2026-04-11 04:09:06,655 | INFO     | current chi2=0.005988974711790981 (change=99.56084847288584 %)
[2026-04-11 06:09:39] 2026-04-11 04:09:06,656 | INFO     | sum of square deviations: 1661798600.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,657 | INFO     | sum of deviations: 2136796205.9999988
[2026-04-11 06:09:39] 2026-04-11 04:09:06,657 | INFO     | mean x (centered): 0.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,657 | INFO     | mean y: 2349890.9485714287
[2026-04-11 06:09:39] 2026-04-11 04:09:06,657 | INFO     | intersect: 2349890.9485714287
[2026-04-11 06:09:39] 2026-04-11 04:09:06,657 | INFO     | chi2: 0.004410577185121911
[2026-04-11 06:09:39] 2026-04-11 04:09:06,657 | INFO     | current chi2=0.004410577185121911 (change=26.355054122395128 %)
[2026-04-11 06:09:39] 2026-04-11 04:09:06,658 | INFO     | sum of square deviations: 1523386702.5
[2026-04-11 06:09:39] 2026-04-11 04:09:06,659 | INFO     | sum of deviations: 3419795236.9999995
[2026-04-11 06:09:39] 2026-04-11 04:09:06,659 | INFO     | mean x (centered): 0.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,659 | INFO     | mean y: 2348475.188235294
[2026-04-11 06:09:39] 2026-04-11 04:09:06,659 | INFO     | intersect: 2348475.188235294
[2026-04-11 06:09:39] 2026-04-11 04:09:06,659 | INFO     | chi2: 0.0013288042512920493
[2026-04-11 06:09:39] 2026-04-11 04:09:06,660 | INFO     | current chi2=0.0013288042512920493 (change=69.87232746375075 %)
[2026-04-11 06:09:39] 2026-04-11 04:09:06,660 | INFO     | sum of square deviations: 1392881930.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,661 | INFO     | sum of deviations: 2747798862.9999995
[2026-04-11 06:09:39] 2026-04-11 04:09:06,661 | INFO     | mean x (centered): 0.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,661 | INFO     | mean y: 2349261.6606060606
[2026-04-11 06:09:39] 2026-04-11 04:09:06,661 | INFO     | intersect: 2349261.6606060606
[2026-04-11 06:09:39] 2026-04-11 04:09:06,661 | INFO     | chi2: 0.0010928048738487986
[2026-04-11 06:09:39] 2026-04-11 04:09:06,662 | INFO     | current chi2=0.0010928048738487986 (change=17.760281637703905 %)
[2026-04-11 06:09:39] 2026-04-11 04:09:06,662 | INFO     | left removable region: 20
[2026-04-11 06:09:39] 2026-04-11 04:09:06,662 | INFO     | sum of square deviations: 1246386160.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,663 | INFO     | sum of deviations: 2622368284.000003
[2026-04-11 06:09:39] 2026-04-11 04:09:06,663 | INFO     | mean x (centered): 0.0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,663 | INFO     | mean y: 2349104.962264151
[2026-04-11 06:09:39] 2026-04-11 04:09:06,663 | INFO     | intersect: 2349104.962264151
[2026-04-11 06:09:39] 2026-04-11 04:09:06,664 | INFO     | chi2: 0.0010556141436535173
[2026-04-11 06:09:39] 2026-04-11 04:09:06,664 | INFO     | current memory leak: 2.10 B/s (using 159 data points, chi2=0.00)
[2026-04-11 06:09:39] 2026-04-11 04:09:06,664 | INFO     | could have reported an average CPU frequency of 2610 MHz (10 samples)
[2026-04-11 06:09:39] 2026-04-11 04:09:06,664 | INFO     | ..............................
[2026-04-11 06:09:39] 2026-04-11 04:09:06,664 | INFO     | . Timing measurements:
[2026-04-11 06:09:39] 2026-04-11 04:09:06,665 | INFO     | . get job = 0 s
[2026-04-11 06:09:39] 2026-04-11 04:09:06,665 | INFO     | . initial setup = 6 s
[2026-04-11 06:09:39] 2026-04-11 04:09:06,665 | INFO     | . payload setup = 9 s
[2026-04-11 06:09:39] 2026-04-11 04:09:06,665 | INFO     | . stage-in = 0 s
[2026-04-11 06:09:39] 2026-04-11 04:09:06,665 | INFO     | . payload execution = 11260 s
[2026-04-11 06:09:39] 2026-04-11 04:09:06,665 | INFO     | . stage-out = 1 s
[2026-04-11 06:09:39] 2026-04-11 04:09:06,665 | INFO     | . log creation = 0 s
[2026-04-11 06:09:39] 2026-04-11 04:09:06,665 | INFO     | ..............................
[2026-04-11 06:09:39] 2026-04-11 04:09:06,761 | INFO     | 
[2026-04-11 06:09:39] 2026-04-11 04:09:06,761 | INFO     | job summary report
[2026-04-11 06:09:39] 2026-04-11 04:09:06,761 | INFO     | --------------------------------------------------
[2026-04-11 06:09:39] 2026-04-11 04:09:06,761 | INFO     | PanDA job id: 7074345402
[2026-04-11 06:09:39] 2026-04-11 04:09:06,761 | INFO     | task id: 49499617
[2026-04-11 06:09:39] 2026-04-11 04:09:06,762 | INFO     | errors: (none)
[2026-04-11 06:09:39] 2026-04-11 04:09:06,762 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 06:09:39] 2026-04-11 04:09:06,762 | INFO     | pilot state: finished 
[2026-04-11 06:09:39] 2026-04-11 04:09:06,762 | INFO     | transexitcode: 0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,762 | INFO     | exeerrorcode: 0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,762 | INFO     | exeerrordiag: 
[2026-04-11 06:09:39] 2026-04-11 04:09:06,762 | INFO     | exitcode: 0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,762 | INFO     | exitmsg: OK
[2026-04-11 06:09:39] 2026-04-11 04:09:06,762 | INFO     | cpuconsumptiontime: 43325 s
[2026-04-11 06:09:39] 2026-04-11 04:09:06,762 | INFO     | nevents: 400
[2026-04-11 06:09:39] 2026-04-11 04:09:06,762 | INFO     | neventsw: 0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,762 | INFO     | pid: 341827
[2026-04-11 06:09:39] 2026-04-11 04:09:06,762 | INFO     | pgrp: 341827
[2026-04-11 06:09:39] 2026-04-11 04:09:06,762 | INFO     | corecount: 4
[2026-04-11 06:09:39] 2026-04-11 04:09:06,763 | INFO     | event service: False
[2026-04-11 06:09:39] 2026-04-11 04:09:06,763 | INFO     | sizes: {0: 2279736, 1: 2281565, 12: 2281565, 11273: 2310750, 11274: 2319826, 11275: 2319964}
[2026-04-11 06:09:39] 2026-04-11 04:09:06,763 | INFO     | --------------------------------------------------
[2026-04-11 06:09:39] 2026-04-11 04:09:06,763 | INFO     | 
[2026-04-11 06:09:39] 2026-04-11 04:09:06,763 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/0
[2026-04-11 06:09:39] 2026-04-11 04:09:06,783 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,784 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,784 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,784 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,784 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,784 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,784 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,784 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,784 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,784 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,784 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,784 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,785 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,785 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,785 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,785 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,785 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,785 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 06:09:39] 2026-04-11 04:09:06,785 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,785 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 06:09:39] 2026-04-11 04:09:06,785 | INFO     | job 7074345402 has completed (purged errors)
[2026-04-11 06:09:39] 2026-04-11 04:09:06,785 | INFO     | overall cleanup function is called
[2026-04-11 06:09:39] 2026-04-11 04:09:07,793 | INFO     | --- collectZombieJob: --- 10, [341827]
[2026-04-11 06:09:39] 2026-04-11 04:09:07,793 | INFO     | zombie collector waiting for pid 341827
[2026-04-11 06:09:39] 2026-04-11 04:09:07,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 06:09:39] 2026-04-11 04:09:07,793 | INFO     | collected zombie processes
[2026-04-11 06:09:39] 2026-04-11 04:09:07,793 | INFO     | will attempt to kill all subprocesses of pid=341827
[2026-04-11 06:09:39] 2026-04-11 04:09:08,149 | INFO     | process IDs to be killed: [341827] (in reverse order)
[2026-04-11 06:09:39] 2026-04-11 04:09:08,266 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 06:09:39] 2026-04-11 04:09:08,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 06:09:39] 2026-04-11 04:09:08,278 | INFO     | did not find any defunct processes belonging to 341827
[2026-04-11 06:09:39] 2026-04-11 04:09:08,289 | INFO     | did not find any defunct processes belonging to 341827
[2026-04-11 06:09:39] 2026-04-11 04:09:08,290 | INFO     | Ready for new job
[2026-04-11 06:09:39] 2026-04-11 04:09:08,292 | INFO     | **************************************
[2026-04-11 06:09:39] 2026-04-11 04:09:08,292 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 06:09:39] 2026-04-11 04:09:08,292 | INFO     | **************************************
[2026-04-11 06:09:39] 2026-04-11 04:09:08,292 | INFO     | 
[2026-04-11 06:09:39] 2026-04-11 04:09:08,296 | INFO     | architecture information:
[2026-04-11 06:09:39] 2026-04-11 04:09:08,296 | INFO     | executing command: cat /etc/os-release
[2026-04-11 06:09:39] 2026-04-11 04:09:08,312 | INFO     | cat /etc/os-release:
[2026-04-11 06:09:39] NAME="CentOS Linux"
[2026-04-11 06:09:39] VERSION="7 (Core)"
[2026-04-11 06:09:39] ID="centos"
[2026-04-11 06:09:39] ID_LIKE="rhel fedora"
[2026-04-11 06:09:39] VERSION_ID="7"
[2026-04-11 06:09:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 06:09:39] ANSI_COLOR="0;31"
[2026-04-11 06:09:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 06:09:39] HOME_URL="https://www.centos.org/"
[2026-04-11 06:09:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 06:09:39] 
[2026-04-11 06:09:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 06:09:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 06:09:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 06:09:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 06:09:39] 
[2026-04-11 06:09:39] 2026-04-11 04:09:08,312 | INFO     | **************************************
[2026-04-11 06:09:39] 2026-04-11 04:09:08,815 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/0
[2026-04-11 06:09:39] 2026-04-11 04:09:08,831 | INFO     | sufficient remaining disk space (27389853696 B)
[2026-04-11 06:09:39] 2026-04-11 04:09:08,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 06:09:39] 2026-04-11 04:09:08,832 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 06:09:39] 2026-04-11 04:09:08,832 | INFO     | update_server=False
[2026-04-11 06:09:39] 2026-04-11 04:09:08,832 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 06:09:39] 2026-04-11 04:09:08,832 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 06:09:39] 2026-04-11 04:09:08,893 | INFO     | all data control threads have been joined
[2026-04-11 06:09:39] 2026-04-11 04:09:08,905 | INFO     | all job control threads have been joined
[2026-04-11 06:09:39] 2026-04-11 04:09:09,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 06:09:39] 2026-04-11 04:09:09,389 | INFO     | all payload control threads have been joined
[2026-04-11 06:09:39] 2026-04-11 04:09:09,837 | INFO     | [job] retrieve thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:09,894 | INFO     | [data] control thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:09,911 | INFO     | [job] control thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:10,145 | INFO     | [job] validate thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:10,179 | INFO     | [payload] failed_post thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:10,210 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:10,394 | INFO     | [payload] control thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:10,726 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:10,731 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:11,038 | INFO     | [data] copytool_in thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:11,086 | INFO     | [payload] validate_post thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:11,383 | INFO     | [data] copytool_out thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:11,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 06:09:39] 2026-04-11 04:09:11,998 | WARNING  | process 341827 can no longer be monitored (due to stat problems) - aborting
[2026-04-11 06:09:39] 2026-04-11 04:09:12,272 | INFO     | using path: /var/lib/boinc/var/slot56/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 06:09:39] 2026-04-11 04:09:12,634 | INFO     | number of running child processes to parent process 341827: 1
[2026-04-11 06:09:39] 2026-04-11 04:09:12,634 | INFO     | maximum number of monitored processes: 6
[2026-04-11 06:09:39] 2026-04-11 04:09:12,634 | INFO     | aborting job monitoring since job object (job id=7074345402) has expired
[2026-04-11 06:09:39] 2026-04-11 04:09:12,634 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 06:09:39] 2026-04-11 04:09:12,634 | INFO     | will abort loop
[2026-04-11 06:09:39] 2026-04-11 04:09:12,777 | INFO     | [job] queue monitor thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:12,838 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:13,640 | INFO     | [job] job monitor thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:18,582 | INFO     | [monitor] cgroup control has ended
[2026-04-11 06:09:39] 2026-04-11 04:09:19,365 | INFO     | job.realtimelogging is not enabled
[2026-04-11 06:09:39] 2026-04-11 04:09:20,371 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 06:09:39] 2026-04-11 04:09:22,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22862154270528)>', '<ExcThread(monitor, started 22861913003776)>']
[2026-04-11 06:09:39] 2026-04-11 04:09:27,461 | INFO     | all workflow threads have been joined
[2026-04-11 06:09:39] 2026-04-11 04:09:27,461 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 06:09:39] 2026-04-11 04:09:27,461 | INFO     | traces error code: 0
[2026-04-11 06:09:39] 2026-04-11 04:09:27,462 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 06:09:39] 2026-04-11 04:09:38,916 | INFO     | PID=336859 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-11 06:09:39] 2026-04-11 04:09:38,917 | INFO     | .. there are 12 such processes running
[2026-04-11 06:09:39] 2026-04-11 04:09:38,917 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 06:09:39] 2026-04-11 04:09:38,917 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 06:09:39] 2026-04-11 04:09:38,917 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 06:09:39] 2026-04-11 04:09:38,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 06:09:39] 2026-04-11 04:09:38,917 | INFO     | [monitor] control thread has ended
[2026-04-11 06:09:39] 2026-04-11 04:09:39,093 [wrapper] ==== pilot stdout END ====
[2026-04-11 06:09:39] 2026-04-11 04:09:39,096 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 06:09:39] 2026-04-11 04:09:39,098 [wrapper] pilotpid: 336859
[2026-04-11 06:09:39] 2026-04-11 04:09:39,101 [wrapper] Pilot exit status: 0
[2026-04-11 06:09:39] 2026-04-11 04:09:39,110 [wrapper] pandaids: 7074345402
[2026-04-11 06:09:39] 2026-04-11 04:09:39,183 [wrapper] cleanup supervisor_pilot  547320 336860
[2026-04-11 06:09:39] 2026-04-11 04:09:39,186 [wrapper] Test setup, not cleaning
[2026-04-11 06:09:39] 2026-04-11 04:09:39,189 [wrapper] apfmon messages muted
[2026-04-11 06:09:39] 2026-04-11 04:09:39,192 [wrapper] ==== wrapper stdout END ====
[2026-04-11 06:09:39] 2026-04-11 04:09:39,194 [wrapper] ==== wrapper stderr END ====
[2026-04-11 06:09:39]  *** Error codes and diagnostics ***
[2026-04-11 06:09:39]     "exeErrorCode": 0,
[2026-04-11 06:09:39]     "pilotErrorCode": 0,
[2026-04-11 06:09:39]  *** Listing of results directory ***
[2026-04-11 06:09:39] total 431532
[2026-04-11 06:09:39] -rwx------. 1 boinc boinc     36322 Apr  9 19:57 runpilot2-wrapper.sh
[2026-04-11 06:09:39] -rw-r--r--. 1 boinc boinc    644190 Apr  9 20:14 pilot3.tar.gz
[2026-04-11 06:09:39] -rw-r--r--. 1 boinc boinc      5094 Apr  9 20:18 queuedata.json
[2026-04-11 06:09:39] -rw-r--r--. 1 boinc boinc       100 Apr 11 03:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 06:09:39] -rwxr-xr-x. 1 boinc boinc      7986 Apr 11 03:00 run_atlas
[2026-04-11 06:09:39] -rw-r--r--. 1 boinc boinc       105 Apr 11 03:00 job.xml
[2026-04-11 06:09:39] -rw-r--r--. 1 boinc boinc      6481 Apr 11 03:00 init_data.xml
[2026-04-11 06:09:39] -rw-r--r--. 2 boinc boinc 258427429 Apr 11 03:00 EVNT.49474425._000004.pool.root.1
[2026-04-11 06:09:39] drwxrwx--x. 2 boinc boinc      4096 Apr 11 03:00 shared
[2026-04-11 06:09:39] -rw-r--r--. 2 boinc boinc    656933 Apr 11 03:00 input.tar.gz
[2026-04-11 06:09:39] -rw-r--r--. 2 boinc boinc     15665 Apr 11 03:00 start_atlas.sh
[2026-04-11 06:09:39] -rw-r--r--. 1 boinc boinc         0 Apr 11 03:00 boinc_lockfile
[2026-04-11 06:09:39] -rw-r--r--. 1 boinc boinc      2588 Apr 11 03:00 pandaJob.out
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc    997860 Apr 11 03:00 agis_schedconf.cvmfs.json
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc       448 Apr 11 03:00 workernode_map.json
[2026-04-11 06:09:39] drwx------. 5 boinc boinc      4096 Apr 11 03:01 pilot3
[2026-04-11 06:09:39] -rw-r--r--. 1 boinc boinc       488 Apr 11 06:08 boinc_task_state.xml
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc 176695312 Apr 11 06:08 HITS.49499617._000076.pool.root.1
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc        95 Apr 11 06:08 pilot_heartbeat.json
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc      1032 Apr 11 06:09 memory_monitor_summary.json
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc   1511579 Apr 11 06:09 agis_ddmendpoints.agis.ALL.json
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc    294710 Apr 11 06:09 log.49499617._000076.job.log.tgz.1
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc      6419 Apr 11 06:09 heartbeat_new.json
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc      6310 Apr 11 06:09 heartbeat.json
[2026-04-11 06:09:39] -rw-r--r--. 1 boinc boinc      8192 Apr 11 06:09 boinc_mmap_file
[2026-04-11 06:09:39] -rw-r--r--. 1 boinc boinc        28 Apr 11 06:09 wrapper_checkpoint.txt
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc       822 Apr 11 06:09 pilotlog.txt
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc   1060924 Apr 11 06:09 log.49499617._000076.job.log.1
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc       357 Apr 11 06:09 output.list
[2026-04-11 06:09:39] -rw-r--r--. 1 boinc boinc       410 Apr 11 06:09 runtime_log
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc   1372160 Apr 11 06:09 result.tar.gz
[2026-04-11 06:09:39] -rw-r--r--. 1 boinc boinc      8827 Apr 11 06:09 runtime_log.err
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc       665 Apr 11 06:09 e895339acdef.diag
[2026-04-11 06:09:39] -rw-r--r--. 1 boinc boinc     20691 Apr 11 06:09 stderr.txt
[2026-04-11 06:09:39] HITS file was successfully produced:
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc 176695312 Apr 11 06:08 shared/HITS.pool.root.1
[2026-04-11 06:09:39]  *** Contents of shared directory: ***
[2026-04-11 06:09:39] total 426936
[2026-04-11 06:09:39] -rw-r--r--. 2 boinc boinc 258427429 Apr 11 03:00 ATLAS.root_0
[2026-04-11 06:09:39] -rw-r--r--. 2 boinc boinc    656933 Apr 11 03:00 input.tar.gz
[2026-04-11 06:09:39] -rw-r--r--. 2 boinc boinc     15665 Apr 11 03:00 start_atlas.sh
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc 176695312 Apr 11 06:08 HITS.pool.root.1
[2026-04-11 06:09:39] -rw-------. 1 boinc boinc   1372160 Apr 11 06:09 result.tar.gz
06:09:40 (333088): run_atlas exited; CPU time 43780.505410
06:09:40 (333088): called boinc_finish(0)

</stderr_txt>
]]>

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