Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:25:47 (950981): wrapper (7.7.26015): starting
08:25:47 (950981): wrapper: running run_atlas (--nthreads 4)
[2026-04-10 08:25:47] Arguments: --nthreads 4
[2026-04-10 08:25:47] Threads: 4
[2026-04-10 08:25:47] Checking for CVMFS
[2026-04-10 08:25:47] No cvmfs_config command found, will try listing directly
[2026-04-10 08:25:47] CVMFS is ok
[2026-04-10 08:25:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-10 08:25:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-10 08:25:47] Further information can be found at the LHC@home message board.
[2026-04-10 08:25:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-10 08:25:47] Checking for apptainer binary...
[2026-04-10 08:25:47] which: no apptainer in ((null))
[2026-04-10 08:25:47] apptainer is not installed, using version from CVMFS
[2026-04-10 08:25:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-10 08:25:47] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/11/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-04-10 08:25:47] apptainer works
[2026-04-10 08:25:47] Set ATHENA_PROC_NUMBER=4
[2026-04-10 08:25:47] Set ATHENA_CORE_NUMBER=4
[2026-04-10 08:25:47] Starting ATLAS job with PandaID=7071982964
[2026-04-10 08:25:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-10 16:26:12]  *** The last 200 lines of the pilot log: ***
[2026-04-10 16:26:12] 2026-04-10 14:25:05,358 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-10 16:26:12] 2026-04-10 14:25:05,358 | INFO     | log transfer has been attempted: DONE
[2026-04-10 16:26:12] 2026-04-10 14:25:05,358 | INFO     | job 7071982964 has finished - writing final server update
[2026-04-10 16:26:12] 2026-04-10 14:25:05,359 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3403892/.job.ad'
[2026-04-10 16:26:12] 2026-04-10 14:25:05,360 | INFO     | total number of processed events: 400 (read)
[2026-04-10 16:26:12] 2026-04-10 14:25:05,396 | INFO     | using path: /var/lib/boinc/var/slot60/slots/11/PanDA_Pilot-7071982964/memory_monitor_summary.json (trf name=prmon)
[2026-04-10 16:26:12] 2026-04-10 14:25:05,397 | INFO     | extracted standard info from prmon json
[2026-04-10 16:26:12] 2026-04-10 14:25:05,397 | INFO     | extracted standard memory fields from prmon json
[2026-04-10 16:26:12] 2026-04-10 14:25:05,397 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-10 16:26:12] 2026-04-10 14:25:05,398 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-10 16:26:12] 2026-04-10 14:25:05,409 | INFO     | fitting pss+swap vs Time
[2026-04-10 16:26:12] 2026-04-10 14:25:05,410 | INFO     | sum of square deviations: 32399565620.0
[2026-04-10 16:26:12] 2026-04-10 14:25:05,418 | INFO     | sum of deviations: -7707493715.999989
[2026-04-10 16:26:12] 2026-04-10 14:25:05,418 | INFO     | mean x (centered): 0.0
[2026-04-10 16:26:12] 2026-04-10 14:25:05,418 | INFO     | mean y: 2338588.305732484
[2026-04-10 16:26:12] 2026-04-10 14:25:05,418 | INFO     | intersect: 2338588.305732484
[2026-04-10 16:26:12] 2026-04-10 14:25:05,419 | INFO     | chi2: 2.2258622885546835
[2026-04-10 16:26:12] 2026-04-10 14:25:05,420 | INFO     | sum of square deviations: 31378644152.5
[2026-04-10 16:26:12] 2026-04-10 14:25:05,428 | INFO     | sum of deviations: 21972186579.999996
[2026-04-10 16:26:12] 2026-04-10 14:25:05,428 | INFO     | mean x (centered): 0.0
[2026-04-10 16:26:12] 2026-04-10 14:25:05,428 | INFO     | mean y: 2342983.4206008585
[2026-04-10 16:26:12] 2026-04-10 14:25:05,428 | INFO     | intersect: 2342983.4206008585
[2026-04-10 16:26:12] 2026-04-10 14:25:05,429 | INFO     | chi2: 1.4257413679325344
[2026-04-10 16:26:12] 2026-04-10 14:25:05,429 | INFO     | current chi2=1.4257413679325344 (change=35.94655988990634 %)
[2026-04-10 16:26:12] 2026-04-10 14:25:05,430 | INFO     | sum of square deviations: 30379397510.0
[2026-04-10 16:26:12] 2026-04-10 14:25:05,437 | INFO     | sum of deviations: 21412343891.00007
[2026-04-10 16:26:12] 2026-04-10 14:25:05,438 | INFO     | mean x (centered): 0.0
[2026-04-10 16:26:12] 2026-04-10 14:25:05,438 | INFO     | mean y: 2342897.9934924077
[2026-04-10 16:26:12] 2026-04-10 14:25:05,438 | INFO     | intersect: 2342897.9934924077
[2026-04-10 16:26:12] 2026-04-10 14:25:05,439 | INFO     | chi2: 1.425789275778309
[2026-04-10 16:26:12] 2026-04-10 14:25:05,439 | INFO     | current chi2=1.425789275778309 (change=-0.003360205914776627 %)
[2026-04-10 16:26:12] 2026-04-10 14:25:05,439 | INFO     | right removable region: 460
[2026-04-10 16:26:12] 2026-04-10 14:25:05,440 | INFO     | sum of square deviations: 31378644152.5
[2026-04-10 16:26:12] 2026-04-10 14:25:05,447 | INFO     | sum of deviations: -67375614897.000015
[2026-04-10 16:26:12] 2026-04-10 14:25:05,447 | INFO     | mean x (centered): 0.0
[2026-04-10 16:26:12] 2026-04-10 14:25:05,448 | INFO     | mean y: 2347450.862660944
[2026-04-10 16:26:12] 2026-04-10 14:25:05,448 | INFO     | intersect: 2347450.862660944
[2026-04-10 16:26:12] 2026-04-10 14:25:05,448 | INFO     | chi2: 0.8963484802701883
[2026-04-10 16:26:12] 2026-04-10 14:25:05,449 | INFO     | current chi2=0.8963484802701883 (change=59.7302813889617 %)
[2026-04-10 16:26:12] 2026-04-10 14:25:05,449 | INFO     | sum of square deviations: 30379397510.0
[2026-04-10 16:26:12] 2026-04-10 14:25:05,457 | INFO     | sum of deviations: -67977470726.000015
[2026-04-10 16:26:12] 2026-04-10 14:25:05,457 | INFO     | mean x (centered): 0.0
[2026-04-10 16:26:12] 2026-04-10 14:25:05,457 | INFO     | mean y: 2347542.752711497
[2026-04-10 16:26:12] 2026-04-10 14:25:05,457 | INFO     | intersect: 2347542.752711497
[2026-04-10 16:26:12] 2026-04-10 14:25:05,458 | INFO     | chi2: 0.8954833005800511
[2026-04-10 16:26:12] 2026-04-10 14:25:05,458 | INFO     | current chi2=0.8954833005800511 (change=0.09652269281211096 %)
[2026-04-10 16:26:12] 2026-04-10 14:25:05,458 | INFO     | left removable region: 10
[2026-04-10 16:26:12] 2026-04-10 14:25:05,459 | INFO     | sum of square deviations: 28256204212.5
[2026-04-10 16:26:12] 2026-04-10 14:25:05,466 | INFO     | sum of deviations: -38195704459.49999
[2026-04-10 16:26:12] 2026-04-10 14:25:05,466 | INFO     | mean x (centered): 0.0
[2026-04-10 16:26:12] 2026-04-10 14:25:05,466 | INFO     | mean y: 2352147.9755555554
[2026-04-10 16:26:12] 2026-04-10 14:25:05,466 | INFO     | intersect: 2352147.9755555554
[2026-04-10 16:26:12] 2026-04-10 14:25:05,467 | INFO     | chi2: 0.08565646759563528
[2026-04-10 16:26:12] 2026-04-10 14:25:05,468 | INFO     | current memory leak: -1.35 B/s (using 450 data points, chi2=0.09)
[2026-04-10 16:26:12] 2026-04-10 14:25:05,469 | INFO     | could have reported an average CPU frequency of 1995 MHz (19 samples)
[2026-04-10 16:26:12] 2026-04-10 14:25:05,469 | INFO     | ..............................
[2026-04-10 16:26:12] 2026-04-10 14:25:05,469 | INFO     | . Timing measurements:
[2026-04-10 16:26:12] 2026-04-10 14:25:05,469 | INFO     | . get job = 0 s
[2026-04-10 16:26:12] 2026-04-10 14:25:05,469 | INFO     | . initial setup = 10 s
[2026-04-10 16:26:12] 2026-04-10 14:25:05,470 | INFO     | . payload setup = 19 s
[2026-04-10 16:26:12] 2026-04-10 14:25:05,470 | INFO     | . stage-in = 0 s
[2026-04-10 16:26:12] 2026-04-10 14:25:05,470 | INFO     | . payload execution = 28696 s
[2026-04-10 16:26:12] 2026-04-10 14:25:05,470 | INFO     | . stage-out = 1 s
[2026-04-10 16:26:12] 2026-04-10 14:25:05,470 | INFO     | . log creation = 0 s
[2026-04-10 16:26:12] 2026-04-10 14:25:05,471 | INFO     | ..............................
[2026-04-10 16:26:12] 2026-04-10 14:25:05,597 | INFO     | 
[2026-04-10 16:26:12] 2026-04-10 14:25:05,598 | INFO     | job summary report
[2026-04-10 16:26:12] 2026-04-10 14:25:05,598 | INFO     | --------------------------------------------------
[2026-04-10 16:26:12] 2026-04-10 14:25:05,598 | INFO     | PanDA job id: 7071982964
[2026-04-10 16:26:12] 2026-04-10 14:25:05,598 | INFO     | task id: 49182477
[2026-04-10 16:26:12] 2026-04-10 14:25:05,598 | INFO     | errors: (none)
[2026-04-10 16:26:12] 2026-04-10 14:25:05,598 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-10 16:26:12] 2026-04-10 14:25:05,598 | INFO     | pilot state: finished 
[2026-04-10 16:26:12] 2026-04-10 14:25:05,599 | INFO     | transexitcode: 0
[2026-04-10 16:26:12] 2026-04-10 14:25:05,599 | INFO     | exeerrorcode: 0
[2026-04-10 16:26:12] 2026-04-10 14:25:05,599 | INFO     | exeerrordiag: 
[2026-04-10 16:26:12] 2026-04-10 14:25:05,599 | INFO     | exitcode: 0
[2026-04-10 16:26:12] 2026-04-10 14:25:05,599 | INFO     | exitmsg: OK
[2026-04-10 16:26:12] 2026-04-10 14:25:05,599 | INFO     | cpuconsumptiontime: 110504 s
[2026-04-10 16:26:12] 2026-04-10 14:25:05,599 | INFO     | nevents: 400
[2026-04-10 16:26:12] 2026-04-10 14:25:05,599 | INFO     | neventsw: 0
[2026-04-10 16:26:12] 2026-04-10 14:25:05,599 | INFO     | pid: 960873
[2026-04-10 16:26:12] 2026-04-10 14:25:05,600 | INFO     | pgrp: 960873
[2026-04-10 16:26:12] 2026-04-10 14:25:05,600 | INFO     | corecount: 4
[2026-04-10 16:26:12] 2026-04-10 14:25:05,600 | INFO     | event service: False
[2026-04-10 16:26:12] 2026-04-10 14:25:05,600 | INFO     | sizes: {0: 2279061, 1: 2279929, 2: 2281587, 28720: 2319819, 28722: 2328841, 28725: 2328897, 28726: 2329219}
[2026-04-10 16:26:12] 2026-04-10 14:25:05,600 | INFO     | --------------------------------------------------
[2026-04-10 16:26:12] 2026-04-10 14:25:05,600 | INFO     | 
[2026-04-10 16:26:12] 2026-04-10 14:25:05,601 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/11
[2026-04-10 16:26:12] 2026-04-10 14:25:05,641 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,642 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,642 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,642 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,642 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,643 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,643 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,643 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,644 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,644 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-10 16:26:12] 2026-04-10 14:25:05,644 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,644 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-10 16:26:12] 2026-04-10 14:25:05,644 | INFO     | job 7071982964 has completed (purged errors)
[2026-04-10 16:26:12] 2026-04-10 14:25:05,645 | INFO     | overall cleanup function is called
[2026-04-10 16:26:12] 2026-04-10 14:25:06,653 | INFO     | --- collectZombieJob: --- 10, [960873]
[2026-04-10 16:26:12] 2026-04-10 14:25:06,654 | INFO     | zombie collector waiting for pid 960873
[2026-04-10 16:26:12] 2026-04-10 14:25:06,654 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-10 16:26:12] 2026-04-10 14:25:06,654 | INFO     | collected zombie processes
[2026-04-10 16:26:12] 2026-04-10 14:25:06,654 | INFO     | will attempt to kill all subprocesses of pid=960873
[2026-04-10 16:26:12] 2026-04-10 14:25:07,771 | INFO     | process IDs to be killed: [960873] (in reverse order)
[2026-04-10 16:26:12] 2026-04-10 14:25:08,195 | WARNING  | found no corresponding commands to process id(s)
[2026-04-10 16:26:12] 2026-04-10 14:25:08,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-10 16:26:12] 2026-04-10 14:25:08,232 | INFO     | did not find any defunct processes belonging to 960873
[2026-04-10 16:26:12] 2026-04-10 14:25:08,269 | INFO     | did not find any defunct processes belonging to 960873
[2026-04-10 16:26:12] 2026-04-10 14:25:08,270 | INFO     | Ready for new job
[2026-04-10 16:26:12] 2026-04-10 14:25:08,273 | INFO     | **************************************
[2026-04-10 16:26:12] 2026-04-10 14:25:08,273 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-10 16:26:12] 2026-04-10 14:25:08,274 | INFO     | **************************************
[2026-04-10 16:26:12] 2026-04-10 14:25:08,274 | INFO     | 
[2026-04-10 16:26:12] 2026-04-10 14:25:08,284 | INFO     | architecture information:
[2026-04-10 16:26:12] 2026-04-10 14:25:08,284 | INFO     | executing command: cat /etc/os-release
[2026-04-10 16:26:12] 2026-04-10 14:25:08,310 | INFO     | cat /etc/os-release:
[2026-04-10 16:26:12] NAME="CentOS Linux"
[2026-04-10 16:26:12] VERSION="7 (Core)"
[2026-04-10 16:26:12] ID="centos"
[2026-04-10 16:26:12] ID_LIKE="rhel fedora"
[2026-04-10 16:26:12] VERSION_ID="7"
[2026-04-10 16:26:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-10 16:26:12] ANSI_COLOR="0;31"
[2026-04-10 16:26:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-10 16:26:12] HOME_URL="https://www.centos.org/"
[2026-04-10 16:26:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-10 16:26:12] 
[2026-04-10 16:26:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-10 16:26:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-10 16:26:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-10 16:26:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-10 16:26:12] 
[2026-04-10 16:26:12] 2026-04-10 14:25:08,311 | INFO     | **************************************
[2026-04-10 16:26:12] 2026-04-10 14:25:08,813 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/11
[2026-04-10 16:26:12] 2026-04-10 14:25:08,840 | INFO     | sufficient remaining disk space (242922553344 B)
[2026-04-10 16:26:12] 2026-04-10 14:25:08,841 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-10 16:26:12] 2026-04-10 14:25:08,841 | INFO     | current server update state: UPDATING_FINAL
[2026-04-10 16:26:12] 2026-04-10 14:25:08,841 | INFO     | update_server=False
[2026-04-10 16:26:12] 2026-04-10 14:25:08,841 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-10 16:26:12] 2026-04-10 14:25:08,841 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-10 16:26:12] 2026-04-10 14:25:08,924 | INFO     | all data control threads have been joined
[2026-04-10 16:26:12] 2026-04-10 14:25:08,985 | INFO     | all payload control threads have been joined
[2026-04-10 16:26:12] 2026-04-10 14:25:09,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-10 16:26:12] 2026-04-10 14:25:09,694 | INFO     | aborting loop
[2026-04-10 16:26:12] 2026-04-10 14:25:09,846 | INFO     | [job] retrieve thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:09,929 | INFO     | [data] control thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:09,987 | INFO     | [payload] control thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:10,108 | INFO     | all job control threads have been joined
[2026-04-10 16:26:12] 2026-04-10 14:25:10,209 | INFO     | [payload] failed_post thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:10,499 | INFO     | [job] validate thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:10,505 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:10,513 | INFO     | [payload] validate_post thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:10,606 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-10 16:26:12] 2026-04-10 14:25:10,695 | INFO     | [job] job monitor thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:10,846 | INFO     | [data] copytool_out thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:10,877 | INFO     | [job] create_data_payload thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:11,113 | INFO     | [job] control thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:11,133 | INFO     | [payload] validate_pre thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:11,192 | INFO     | [payload] execute_payloads thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:11,287 | INFO     | [data] copytool_in thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:11,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-10 16:26:12] 2026-04-10 14:25:11,611 | INFO     | [job] queue monitor thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:15,361 | INFO     | [data] queue_monitor thread has finished
[2026-04-10 16:26:12] 2026-04-10 14:25:39,203 | INFO     | PID=955570 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-10 16:26:12] 2026-04-10 14:25:39,203 | INFO     | .. there are 22 such processes running
[2026-04-10 16:26:12] 2026-04-10 14:25:39,204 | INFO     | found 0 job(s) in 20 queues
[2026-04-10 16:26:12] 2026-04-10 14:25:39,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-10 16:26:12] 2026-04-10 14:25:39,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-10 16:26:12] 2026-04-10 14:26:05,468 | INFO     | [monitor] cgroup control has ended
[2026-04-10 16:26:12] 2026-04-10 14:26:06,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23167872489280)>', '<ExcThread(monitor, started 23167633733376)>']
[2026-04-10 16:26:12] 2026-04-10 14:26:07,132 [wrapper] supervise_pilot (15 min periods counter: 33)
[2026-04-10 16:26:12] 2026-04-10 14:26:07,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-10 16:26:12] 2026-04-10 14:26:07,344 | INFO     | [monitor] control thread has ended
[2026-04-10 16:26:12] 2026-04-10 14:26:11,459 | INFO     | all workflow threads have been joined
[2026-04-10 16:26:12] 2026-04-10 14:26:11,459 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-10 16:26:12] 2026-04-10 14:26:11,460 | INFO     | traces error code: 0
[2026-04-10 16:26:12] 2026-04-10 14:26:11,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-10 16:26:12] 2026-04-10 14:26:11,686 [wrapper] ==== pilot stdout END ====
[2026-04-10 16:26:12] 2026-04-10 14:26:11,691 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-10 16:26:12] 2026-04-10 14:26:11,696 [wrapper] pilotpid: 955570
[2026-04-10 16:26:12] 2026-04-10 14:26:11,704 [wrapper] Pilot exit status: 0
[2026-04-10 16:26:12] 2026-04-10 14:26:11,723 [wrapper] pandaids: 7071982964
[2026-04-10 16:26:12] 2026-04-10 14:26:11,977 [wrapper] cleanup supervisor_pilot 1887153 955571
[2026-04-10 16:26:12] 2026-04-10 14:26:11,983 [wrapper] Test setup, not cleaning
[2026-04-10 16:26:12] 2026-04-10 14:26:11,988 [wrapper] apfmon messages muted
[2026-04-10 16:26:12] 2026-04-10 14:26:11,993 [wrapper] ==== wrapper stdout END ====
[2026-04-10 16:26:12] 2026-04-10 14:26:11,997 [wrapper] ==== wrapper stderr END ====
[2026-04-10 16:26:12]  *** Error codes and diagnostics ***
[2026-04-10 16:26:12]     "exeErrorCode": 0,
[2026-04-10 16:26:12]     "pilotErrorCode": 0,
[2026-04-10 16:26:12]  *** Listing of results directory ***
[2026-04-10 16:26:12] total 459524
[2026-04-10 16:26:12] -rwx------. 1 boinc boinc     36322 Apr  9 19:43 runpilot2-wrapper.sh
[2026-04-10 16:26:12] -rw-r--r--. 1 boinc boinc    644190 Apr  9 19:48 pilot3.tar.gz
[2026-04-10 16:26:12] -rw-r--r--. 1 boinc boinc      5094 Apr  9 19:54 queuedata.json
[2026-04-10 16:26:12] -rw-r--r--. 1 boinc boinc       100 Apr 10 08:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-10 16:26:12] -rwxr-xr-x. 1 boinc boinc      7986 Apr 10 08:25 run_atlas
[2026-04-10 16:26:12] -rw-r--r--. 1 boinc boinc       105 Apr 10 08:25 job.xml
[2026-04-10 16:26:12] -rw-r--r--. 2 boinc boinc 235399241 Apr 10 08:25 EVNT.49137153._000001.pool.root.1
[2026-04-10 16:26:12] -rw-r--r--. 1 boinc boinc      6612 Apr 10 08:25 init_data.xml
[2026-04-10 16:26:12] -rw-r--r--. 2 boinc boinc     15665 Apr 10 08:25 start_atlas.sh
[2026-04-10 16:26:12] drwxrwx--x. 2 boinc boinc      4096 Apr 10 08:25 shared
[2026-04-10 16:26:12] -rw-r--r--. 2 boinc boinc    656934 Apr 10 08:25 input.tar.gz
[2026-04-10 16:26:12] -rw-r--r--. 1 boinc boinc         0 Apr 10 08:25 boinc_lockfile
[2026-04-10 16:26:12] -rw-r--r--. 1 boinc boinc      2615 Apr 10 08:25 pandaJob.out
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc    997892 Apr 10 08:26 agis_schedconf.cvmfs.json
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc       440 Apr 10 08:26 workernode_map.json
[2026-04-10 16:26:12] drwx------. 5 boinc boinc      4096 Apr 10 08:26 pilot3
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc 225129282 Apr 10 16:24 HITS.49182477._000964.pool.root.1
[2026-04-10 16:26:12] -rw-r--r--. 1 boinc boinc       489 Apr 10 16:24 boinc_task_state.xml
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc      1029 Apr 10 16:24 memory_monitor_summary.json
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc   1511579 Apr 10 16:25 agis_ddmendpoints.agis.ALL.json
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc    470916 Apr 10 16:25 log.49182477._000964.job.log.tgz.1
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc      6380 Apr 10 16:25 heartbeat_new.json
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc      6271 Apr 10 16:25 heartbeat.json
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc        95 Apr 10 16:25 pilot_heartbeat.json
[2026-04-10 16:26:12] -rw-r--r--. 1 boinc boinc      8192 Apr 10 16:25 boinc_mmap_file
[2026-04-10 16:26:12] -rw-r--r--. 1 boinc boinc        29 Apr 10 16:25 wrapper_checkpoint.txt
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc      4830 Apr 10 16:26 pilotlog.txt
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc   2510824 Apr 10 16:26 log.49182477._000964.job.log.1
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc       357 Apr 10 16:26 output.list
[2026-04-10 16:26:12] -rw-r--r--. 1 boinc boinc       410 Apr 10 16:26 runtime_log
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc   3000320 Apr 10 16:26 result.tar.gz
[2026-04-10 16:26:12] -rw-r--r--. 1 boinc boinc      8844 Apr 10 16:26 runtime_log.err
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc       668 Apr 10 16:26 e54f390b2692.diag
[2026-04-10 16:26:12] -rw-r--r--. 1 boinc boinc     20843 Apr 10 16:26 stderr.txt
[2026-04-10 16:26:12] HITS file was successfully produced:
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc 225129282 Apr 10 16:24 shared/HITS.pool.root.1
[2026-04-10 16:26:12]  *** Contents of shared directory: ***
[2026-04-10 16:26:12] total 453340
[2026-04-10 16:26:12] -rw-r--r--. 2 boinc boinc 235399241 Apr 10 08:25 ATLAS.root_0
[2026-04-10 16:26:12] -rw-r--r--. 2 boinc boinc     15665 Apr 10 08:25 start_atlas.sh
[2026-04-10 16:26:12] -rw-r--r--. 2 boinc boinc    656934 Apr 10 08:25 input.tar.gz
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc 225129282 Apr 10 16:24 HITS.pool.root.1
[2026-04-10 16:26:12] -rw-------. 1 boinc boinc   3000320 Apr 10 16:26 result.tar.gz
16:26:13 (950981): run_atlas exited; CPU time 113136.842466
16:26:13 (950981): called boinc_finish(0)

</stderr_txt>
]]>

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