Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:04:08 (16742): wrapper (7.7.26015): starting
22:04:08 (16742): wrapper: running run_atlas (--nthreads 4)
[2026-04-10 22:04:08] Arguments: --nthreads 4
[2026-04-10 22:04:08] Threads: 4
[2026-04-10 22:04:08] Checking for CVMFS
[2026-04-10 22:04:08] No cvmfs_config command found, will try listing directly
[2026-04-10 22:04:08] CVMFS is ok
[2026-04-10 22:04:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-10 22:04:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-10 22:04:08] Further information can be found at the LHC@home message board.
[2026-04-10 22:04:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-10 22:04:08] Checking for apptainer binary...
[2026-04-10 22:04:08] which: no apptainer in ((null))
[2026-04-10 22:04:08] apptainer is not installed, using version from CVMFS
[2026-04-10 22:04:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-10 22:04:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-04-10 22:04:08] apptainer works
[2026-04-10 22:04:08] Set ATHENA_PROC_NUMBER=4
[2026-04-10 22:04:08] Set ATHENA_CORE_NUMBER=4
[2026-04-10 22:04:08] Starting ATLAS job with PandaID=7071885396
[2026-04-10 22:04:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-11 06:51:24]  *** The last 200 lines of the pilot log: ***
[2026-04-11 06:51:24] 2026-04-11 04:50:18,851 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_756218/.job.ad'
[2026-04-11 06:51:24] 2026-04-11 04:50:18,851 | INFO     | total number of processed events: 400 (read)
[2026-04-11 06:51:24] 2026-04-11 04:50:18,862 | INFO     | using path: /var/lib/boinc/var/slot36/slots/0/PanDA_Pilot-7071885396/memory_monitor_summary.json (trf name=prmon)
[2026-04-11 06:51:24] 2026-04-11 04:50:18,863 | INFO     | extracted standard info from prmon json
[2026-04-11 06:51:24] 2026-04-11 04:50:18,863 | INFO     | extracted standard memory fields from prmon json
[2026-04-11 06:51:24] 2026-04-11 04:50:18,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-11 06:51:24] 2026-04-11 04:50:18,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-11 06:51:24] 2026-04-11 04:50:18,871 | INFO     | fitting pss+swap vs Time
[2026-04-11 06:51:24] 2026-04-11 04:50:18,872 | INFO     | sum of square deviations: 42849763418.0
[2026-04-11 06:51:24] 2026-04-11 04:50:18,878 | INFO     | sum of deviations: 90703323957.00005
[2026-04-11 06:51:24] 2026-04-11 04:50:18,878 | INFO     | mean x (centered): 0.0
[2026-04-11 06:51:24] 2026-04-11 04:50:18,878 | INFO     | mean y: 2347205.6943907156
[2026-04-11 06:51:24] 2026-04-11 04:50:18,878 | INFO     | intersect: 2347205.6943907156
[2026-04-11 06:51:24] 2026-04-11 04:50:18,879 | INFO     | chi2: 1.3636997002410935
[2026-04-11 06:51:24] 2026-04-11 04:50:18,879 | INFO     | sum of square deviations: 41618521728.0
[2026-04-11 06:51:24] 2026-04-11 04:50:18,885 | INFO     | sum of deviations: 89715673079.0
[2026-04-11 06:51:24] 2026-04-11 04:50:18,885 | INFO     | mean x (centered): 0.0
[2026-04-11 06:51:24] 2026-04-11 04:50:18,885 | INFO     | mean y: 2347083.36328125
[2026-04-11 06:51:24] 2026-04-11 04:50:18,885 | INFO     | intersect: 2347083.36328125
[2026-04-11 06:51:24] 2026-04-11 04:50:18,886 | INFO     | chi2: 1.363761089091089
[2026-04-11 06:51:24] 2026-04-11 04:50:18,886 | INFO     | current chi2=1.363761089091089 (change=-0.004501639912698506 %)
[2026-04-11 06:51:24] 2026-04-11 04:50:18,886 | INFO     | right removable region: 511
[2026-04-11 06:51:24] 2026-04-11 04:50:18,887 | INFO     | sum of square deviations: 41618521728.0
[2026-04-11 06:51:24] 2026-04-11 04:50:18,892 | INFO     | sum of deviations: 19742777490.0
[2026-04-11 06:51:24] 2026-04-11 04:50:18,892 | INFO     | mean x (centered): 0.0
[2026-04-11 06:51:24] 2026-04-11 04:50:18,892 | INFO     | mean y: 2355954.49609375
[2026-04-11 06:51:24] 2026-04-11 04:50:18,892 | INFO     | intersect: 2355954.49609375
[2026-04-11 06:51:24] 2026-04-11 04:50:18,893 | INFO     | chi2: 0.023177439630945238
[2026-04-11 06:51:24] 2026-04-11 04:50:18,893 | INFO     | current chi2=0.023177439630945238 (change=98.30040003478423 %)
[2026-04-11 06:51:24] 2026-04-11 04:50:18,894 | INFO     | sum of square deviations: 40411094438.0
[2026-04-11 06:51:24] 2026-04-11 04:50:18,899 | INFO     | sum of deviations: 14819184816.000002
[2026-04-11 06:51:24] 2026-04-11 04:50:18,900 | INFO     | mean x (centered): 0.0
[2026-04-11 06:51:24] 2026-04-11 04:50:18,900 | INFO     | mean y: 2356572.9921104535
[2026-04-11 06:51:24] 2026-04-11 04:50:18,900 | INFO     | intersect: 2356572.9921104535
[2026-04-11 06:51:24] 2026-04-11 04:50:18,900 | INFO     | chi2: 0.01578742277721846
[2026-04-11 06:51:24] 2026-04-11 04:50:18,901 | INFO     | current chi2=0.01578742277721846 (change=31.884526381680384 %)
[2026-04-11 06:51:24] 2026-04-11 04:50:18,901 | INFO     | sum of square deviations: 39227248985.5
[2026-04-11 06:51:24] 2026-04-11 04:50:18,906 | INFO     | sum of deviations: 18145765190.500004
[2026-04-11 06:51:24] 2026-04-11 04:50:18,907 | INFO     | mean x (centered): 0.0
[2026-04-11 06:51:24] 2026-04-11 04:50:18,907 | INFO     | mean y: 2356144.201195219
[2026-04-11 06:51:24] 2026-04-11 04:50:18,907 | INFO     | intersect: 2356144.201195219
[2026-04-11 06:51:24] 2026-04-11 04:50:18,908 | INFO     | chi2: 0.013556369291718502
[2026-04-11 06:51:24] 2026-04-11 04:50:18,908 | INFO     | current chi2=0.013556369291718502 (change=14.131841003963025 %)
[2026-04-11 06:51:24] 2026-04-11 04:50:18,908 | INFO     | left removable region: 15
[2026-04-11 06:51:24] 2026-04-11 04:50:18,908 | INFO     | sum of square deviations: 37837435020.0
[2026-04-11 06:51:24] 2026-04-11 04:50:18,914 | INFO     | sum of deviations: 17815911472.5
[2026-04-11 06:51:24] 2026-04-11 04:50:18,914 | INFO     | mean x (centered): 0.0
[2026-04-11 06:51:24] 2026-04-11 04:50:18,914 | INFO     | mean y: 2356100.768145161
[2026-04-11 06:51:24] 2026-04-11 04:50:18,914 | INFO     | intersect: 2356100.768145161
[2026-04-11 06:51:24] 2026-04-11 04:50:18,915 | INFO     | chi2: 0.013544066511441973
[2026-04-11 06:51:24] 2026-04-11 04:50:18,915 | INFO     | current memory leak: 0.47 B/s (using 496 data points, chi2=0.01)
[2026-04-11 06:51:24] 2026-04-11 04:50:18,916 | INFO     | could have reported an average CPU frequency of 2596 MHz (21 samples)
[2026-04-11 06:51:24] 2026-04-11 04:50:18,916 | INFO     | ..............................
[2026-04-11 06:51:24] 2026-04-11 04:50:18,916 | INFO     | . Timing measurements:
[2026-04-11 06:51:24] 2026-04-11 04:50:18,916 | INFO     | . get job = 0 s
[2026-04-11 06:51:24] 2026-04-11 04:50:18,916 | INFO     | . initial setup = 5 s
[2026-04-11 06:51:24] 2026-04-11 04:50:18,916 | INFO     | . payload setup = 9 s
[2026-04-11 06:51:24] 2026-04-11 04:50:18,916 | INFO     | . stage-in = 0 s
[2026-04-11 06:51:24] 2026-04-11 04:50:18,916 | INFO     | . payload execution = 31523 s
[2026-04-11 06:51:24] 2026-04-11 04:50:18,916 | INFO     | . stage-out = 1 s
[2026-04-11 06:51:24] 2026-04-11 04:50:18,916 | INFO     | . log creation = 0 s
[2026-04-11 06:51:24] 2026-04-11 04:50:18,916 | INFO     | ..............................
[2026-04-11 06:51:24] 2026-04-11 04:50:19,211 | INFO     | 
[2026-04-11 06:51:24] 2026-04-11 04:50:19,211 | INFO     | job summary report
[2026-04-11 06:51:24] 2026-04-11 04:50:19,211 | INFO     | --------------------------------------------------
[2026-04-11 06:51:24] 2026-04-11 04:50:19,212 | INFO     | PanDA job id: 7071885396
[2026-04-11 06:51:24] 2026-04-11 04:50:19,212 | INFO     | task id: 49176766
[2026-04-11 06:51:24] 2026-04-11 04:50:19,212 | INFO     | errors: (none)
[2026-04-11 06:51:24] 2026-04-11 04:50:19,212 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-11 06:51:24] 2026-04-11 04:50:19,212 | INFO     | pilot state: finished 
[2026-04-11 06:51:24] 2026-04-11 04:50:19,212 | INFO     | transexitcode: 0
[2026-04-11 06:51:24] 2026-04-11 04:50:19,212 | INFO     | exeerrorcode: 0
[2026-04-11 06:51:24] 2026-04-11 04:50:19,212 | INFO     | exeerrordiag: 
[2026-04-11 06:51:24] 2026-04-11 04:50:19,212 | INFO     | exitcode: 0
[2026-04-11 06:51:24] 2026-04-11 04:50:19,212 | INFO     | exitmsg: OK
[2026-04-11 06:51:24] 2026-04-11 04:50:19,212 | INFO     | cpuconsumptiontime: 123161 s
[2026-04-11 06:51:24] 2026-04-11 04:50:19,212 | INFO     | nevents: 400
[2026-04-11 06:51:24] 2026-04-11 04:50:19,212 | INFO     | neventsw: 0
[2026-04-11 06:51:24] 2026-04-11 04:50:19,213 | INFO     | pid: 25719
[2026-04-11 06:51:24] 2026-04-11 04:50:19,213 | INFO     | pgrp: 25719
[2026-04-11 06:51:24] 2026-04-11 04:50:19,213 | INFO     | corecount: 4
[2026-04-11 06:51:24] 2026-04-11 04:50:19,213 | INFO     | event service: False
[2026-04-11 06:51:24] 2026-04-11 04:50:19,213 | INFO     | sizes: {0: 2279683, 1: 2281512, 12: 2281512, 31536: 2319828, 31539: 2328904, 31542: 2329042}
[2026-04-11 06:51:24] 2026-04-11 04:50:19,213 | INFO     | --------------------------------------------------
[2026-04-11 06:51:24] 2026-04-11 04:50:19,213 | INFO     | 
[2026-04-11 06:51:24] 2026-04-11 04:50:19,213 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/0
[2026-04-11 06:51:24] 2026-04-11 04:50:19,236 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,236 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,237 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,237 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,237 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,237 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,237 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,237 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,237 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,237 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,237 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,238 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,238 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,238 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,238 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,238 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-11 06:51:24] 2026-04-11 04:50:19,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,238 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-11 06:51:24] 2026-04-11 04:50:19,238 | INFO     | job 7071885396 has completed (purged errors)
[2026-04-11 06:51:24] 2026-04-11 04:50:19,238 | INFO     | overall cleanup function is called
[2026-04-11 06:51:24] 2026-04-11 04:50:19,525 | INFO     | PID=20913 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-11 06:51:24] 2026-04-11 04:50:19,526 | INFO     | .. there are 12 such processes running
[2026-04-11 06:51:24] 2026-04-11 04:50:20,247 | INFO     | --- collectZombieJob: --- 10, [25719]
[2026-04-11 06:51:24] 2026-04-11 04:50:20,247 | INFO     | zombie collector waiting for pid 25719
[2026-04-11 06:51:24] 2026-04-11 04:50:20,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-11 06:51:24] 2026-04-11 04:50:20,247 | INFO     | collected zombie processes
[2026-04-11 06:51:24] 2026-04-11 04:50:20,248 | INFO     | will attempt to kill all subprocesses of pid=25719
[2026-04-11 06:51:24] 2026-04-11 04:50:20,589 | INFO     | process IDs to be killed: [25719] (in reverse order)
[2026-04-11 06:51:24] 2026-04-11 04:50:20,709 | WARNING  | found no corresponding commands to process id(s)
[2026-04-11 06:51:24] 2026-04-11 04:50:20,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-11 06:51:24] 2026-04-11 04:50:20,721 | INFO     | did not find any defunct processes belonging to 25719
[2026-04-11 06:51:24] 2026-04-11 04:50:20,732 | INFO     | did not find any defunct processes belonging to 25719
[2026-04-11 06:51:24] 2026-04-11 04:50:20,732 | INFO     | Ready for new job
[2026-04-11 06:51:24] 2026-04-11 04:50:20,735 | INFO     | **************************************
[2026-04-11 06:51:24] 2026-04-11 04:50:20,735 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-11 06:51:24] 2026-04-11 04:50:20,735 | INFO     | **************************************
[2026-04-11 06:51:24] 2026-04-11 04:50:20,735 | INFO     | 
[2026-04-11 06:51:24] 2026-04-11 04:50:20,739 | INFO     | architecture information:
[2026-04-11 06:51:24] 2026-04-11 04:50:20,739 | INFO     | executing command: cat /etc/os-release
[2026-04-11 06:51:24] 2026-04-11 04:50:20,753 | INFO     | cat /etc/os-release:
[2026-04-11 06:51:24] NAME="CentOS Linux"
[2026-04-11 06:51:24] VERSION="7 (Core)"
[2026-04-11 06:51:24] ID="centos"
[2026-04-11 06:51:24] ID_LIKE="rhel fedora"
[2026-04-11 06:51:24] VERSION_ID="7"
[2026-04-11 06:51:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-11 06:51:24] ANSI_COLOR="0;31"
[2026-04-11 06:51:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-11 06:51:24] HOME_URL="https://www.centos.org/"
[2026-04-11 06:51:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-11 06:51:24] 
[2026-04-11 06:51:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-11 06:51:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-11 06:51:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-11 06:51:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-11 06:51:24] 
[2026-04-11 06:51:24] 2026-04-11 04:50:20,754 | INFO     | **************************************
[2026-04-11 06:51:24] 2026-04-11 04:50:21,256 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/0
[2026-04-11 06:51:24] 2026-04-11 04:50:21,272 | INFO     | sufficient remaining disk space (28277997568 B)
[2026-04-11 06:51:24] 2026-04-11 04:50:21,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-11 06:51:24] 2026-04-11 04:50:21,272 | INFO     | current server update state: UPDATING_FINAL
[2026-04-11 06:51:24] 2026-04-11 04:50:21,273 | INFO     | update_server=False
[2026-04-11 06:51:24] 2026-04-11 04:50:21,273 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-11 06:51:24] 2026-04-11 04:50:21,325 | INFO     | all job control threads have been joined
[2026-04-11 06:51:24] 2026-04-11 04:50:21,557 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-11 06:51:24] 2026-04-11 04:50:21,668 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-11 06:51:24] 2026-04-11 04:50:21,668 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-11 06:51:24] 2026-04-11 04:50:21,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-11 06:51:24] 2026-04-11 04:50:21,669 | INFO     | will abort loop
[2026-04-11 06:51:24] 2026-04-11 04:50:21,969 | INFO     | all payload control threads have been joined
[2026-04-11 06:51:24] 2026-04-11 04:50:22,055 | INFO     | all data control threads have been joined
[2026-04-11 06:51:24] 2026-04-11 04:50:22,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-11 06:51:24] 2026-04-11 04:50:22,278 | INFO     | [job] retrieve thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:22,330 | INFO     | [job] control thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:22,450 | INFO     | [payload] validate_post thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:22,673 | INFO     | [job] job monitor thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:22,786 | INFO     | [job] validate thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:22,974 | INFO     | [payload] control thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:23,060 | INFO     | [data] control thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:23,232 | INFO     | [job] create_data_payload thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:23,367 | INFO     | [payload] execute_payloads thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:23,402 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:23,426 | INFO     | [payload] validate_pre thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:23,499 | INFO     | [payload] failed_post thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:23,562 | INFO     | [data] copytool_out thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:23,739 | INFO     | [data] copytool_in thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:24,012 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-11 06:51:24] 2026-04-11 04:50:25,017 | INFO     | [job] queue monitor thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:26,151 | INFO     | [data] queue_monitor thread has finished
[2026-04-11 06:51:24] 2026-04-11 04:50:52,039 | INFO     | PID=20913 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-11 06:51:24] 2026-04-11 04:50:52,039 | INFO     | .. there are 12 such processes running
[2026-04-11 06:51:24] 2026-04-11 04:50:52,040 | INFO     | found 0 job(s) in 20 queues
[2026-04-11 06:51:24] 2026-04-11 04:50:52,040 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-11 06:51:24] 2026-04-11 04:50:52,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-11 06:51:24] 2026-04-11 04:51:17,012 | INFO     | [monitor] cgroup control has ended
[2026-04-11 06:51:24] 2026-04-11 04:51:18,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22528570361664)>', '<ExcThread(monitor, started 22528321120000)>']
[2026-04-11 06:51:24] 2026-04-11 04:51:19,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-11 06:51:24] 2026-04-11 04:51:19,172 | INFO     | [monitor] control thread has ended
[2026-04-11 06:51:24] 2026-04-11 04:51:23,842 | INFO     | all workflow threads have been joined
[2026-04-11 06:51:24] 2026-04-11 04:51:23,842 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-11 06:51:24] 2026-04-11 04:51:23,842 | INFO     | traces error code: 0
[2026-04-11 06:51:24] 2026-04-11 04:51:23,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-11 06:51:24] 2026-04-11 04:51:23,973 [wrapper] ==== pilot stdout END ====
[2026-04-11 06:51:24] 2026-04-11 04:51:23,976 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-11 06:51:24] 2026-04-11 04:51:23,978 [wrapper] pilotpid: 20913
[2026-04-11 06:51:24] 2026-04-11 04:51:23,981 [wrapper] Pilot exit status: 0
[2026-04-11 06:51:24] 2026-04-11 04:51:23,992 [wrapper] pandaids: 7071885396
[2026-04-11 06:51:24] 2026-04-11 04:51:24,068 [wrapper] cleanup supervisor_pilot  652873 20914
[2026-04-11 06:51:24] 2026-04-11 04:51:24,071 [wrapper] Test setup, not cleaning
[2026-04-11 06:51:24] 2026-04-11 04:51:24,074 [wrapper] apfmon messages muted
[2026-04-11 06:51:24] 2026-04-11 04:51:24,077 [wrapper] ==== wrapper stdout END ====
[2026-04-11 06:51:24] 2026-04-11 04:51:24,080 [wrapper] ==== wrapper stderr END ====
[2026-04-11 06:51:24]  *** Error codes and diagnostics ***
[2026-04-11 06:51:24]     "exeErrorCode": 0,
[2026-04-11 06:51:24]     "pilotErrorCode": 0,
[2026-04-11 06:51:24]  *** Listing of results directory ***
[2026-04-11 06:51:24] total 494576
[2026-04-11 06:51:24] -rwx------. 1 boinc boinc     36322 Apr  9 19:43 runpilot2-wrapper.sh
[2026-04-11 06:51:24] -rw-r--r--. 1 boinc boinc      5094 Apr  9 19:47 queuedata.json
[2026-04-11 06:51:24] -rw-r--r--. 1 boinc boinc    644190 Apr  9 19:48 pilot3.tar.gz
[2026-04-11 06:51:24] -rw-r--r--. 1 boinc boinc       100 Apr 10 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-11 06:51:24] -rwxr-xr-x. 1 boinc boinc      7986 Apr 10 22:04 run_atlas
[2026-04-11 06:51:24] -rw-r--r--. 1 boinc boinc       105 Apr 10 22:04 job.xml
[2026-04-11 06:51:24] -rw-r--r--. 1 boinc boinc      6481 Apr 10 22:04 init_data.xml
[2026-04-11 06:51:24] -rw-r--r--. 2 boinc boinc 242605252 Apr 10 22:04 EVNT.49135151._000014.pool.root.1
[2026-04-11 06:51:24] -rw-r--r--. 2 boinc boinc     15665 Apr 10 22:04 start_atlas.sh
[2026-04-11 06:51:24] drwxrwx--x. 2 boinc boinc      4096 Apr 10 22:04 shared
[2026-04-11 06:51:24] -rw-r--r--. 2 boinc boinc    656943 Apr 10 22:04 input.tar.gz
[2026-04-11 06:51:24] -rw-r--r--. 1 boinc boinc         0 Apr 10 22:04 boinc_lockfile
[2026-04-11 06:51:24] -rw-r--r--. 1 boinc boinc      2617 Apr 10 22:04 pandaJob.out
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc    997868 Apr 10 22:04 agis_schedconf.cvmfs.json
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc       452 Apr 10 22:04 workernode_map.json
[2026-04-11 06:51:24] drwx------. 5 boinc boinc      4096 Apr 10 22:04 pilot3
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc 253037344 Apr 11 06:49 HITS.49176766._000854.pool.root.1
[2026-04-11 06:51:24] -rw-r--r--. 1 boinc boinc       489 Apr 11 06:49 boinc_task_state.xml
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc        95 Apr 11 06:50 pilot_heartbeat.json
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc      1036 Apr 11 06:50 memory_monitor_summary.json
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc   1511579 Apr 11 06:50 agis_ddmendpoints.agis.ALL.json
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc    501000 Apr 11 06:50 log.49176766._000854.job.log.tgz.1
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc      6418 Apr 11 06:50 heartbeat_new.json
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc      6309 Apr 11 06:50 heartbeat.json
[2026-04-11 06:51:24] -rw-r--r--. 1 boinc boinc      8192 Apr 11 06:51 boinc_mmap_file
[2026-04-11 06:51:24] -rw-r--r--. 1 boinc boinc        29 Apr 11 06:51 wrapper_checkpoint.txt
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc      5012 Apr 11 06:51 pilotlog.txt
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc   2870293 Apr 11 06:51 log.49176766._000854.job.log.1
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc       357 Apr 11 06:51 output.list
[2026-04-11 06:51:24] -rw-r--r--. 1 boinc boinc       410 Apr 11 06:51 runtime_log
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc   3389440 Apr 11 06:51 result.tar.gz
[2026-04-11 06:51:24] -rw-r--r--. 1 boinc boinc      8827 Apr 11 06:51 runtime_log.err
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc       668 Apr 11 06:51 e533fc5a6964.diag
[2026-04-11 06:51:24] -rw-r--r--. 1 boinc boinc     20895 Apr 11 06:51 stderr.txt
[2026-04-11 06:51:24] HITS file was successfully produced:
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc 253037344 Apr 11 06:49 shared/HITS.pool.root.1
[2026-04-11 06:51:24]  *** Contents of shared directory: ***
[2026-04-11 06:51:24] total 488008
[2026-04-11 06:51:24] -rw-r--r--. 2 boinc boinc 242605252 Apr 10 22:04 ATLAS.root_0
[2026-04-11 06:51:24] -rw-r--r--. 2 boinc boinc     15665 Apr 10 22:04 start_atlas.sh
[2026-04-11 06:51:24] -rw-r--r--. 2 boinc boinc    656943 Apr 10 22:04 input.tar.gz
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc 253037344 Apr 11 06:49 HITS.pool.root.1
[2026-04-11 06:51:24] -rw-------. 1 boinc boinc   3389440 Apr 11 06:51 result.tar.gz
06:51:25 (16742): run_atlas exited; CPU time 124659.185426
06:51:25 (16742): called boinc_finish(0)

</stderr_txt>
]]>

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