Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:57:16 (2046): wrapper (7.7.26015): starting
17:57:16 (2046): wrapper: running run_atlas (--nthreads 8)
[2026-04-08 17:57:16] Arguments: --nthreads 8
[2026-04-08 17:57:16] Threads: 8
[2026-04-08 17:57:16] Checking for CVMFS
[2026-04-08 17:57:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-08 17:57:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-08 17:57:16] Running cvmfs_config stat atlas.cern.ch
[2026-04-08 17:57:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-08 17:57:16] 2.11.2.0 2759 52877 88264 158234 0 49 14949680 20275201 1 130560 1 12193052 99.853 3039902 17348 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-08 17:57:16] CVMFS is ok
[2026-04-08 17:57:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-08 17:57:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-08 17:57:16] Further information can be found at the LHC@home message board.
[2026-04-08 17:57:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-08 17:57:16] Checking for apptainer binary...
[2026-04-08 17:57:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-08 17:57:16] Running /usr/bin/apptainer --version
[2026-04-08 17:57:16] apptainer version 1.3.2-1.el7
[2026-04-08 17:57:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-08 17:57:18] c-204-2.aglt2.org
[2026-04-08 17:57:18] apptainer works
[2026-04-08 17:57:18] Set ATHENA_PROC_NUMBER=8
[2026-04-08 17:57:18] Set ATHENA_CORE_NUMBER=8
[2026-04-08 17:57:18] Starting ATLAS job with PandaID=7082812785
[2026-04-08 17:57:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-08 20:07:05]  *** The last 200 lines of the pilot log: ***
[2026-04-08 20:07:05] 2026-04-09 00:06:02,949 | INFO     | mean x (centered): 0.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,949 | INFO     | mean y: 2493082.0476190476
[2026-04-08 20:07:05] 2026-04-09 00:06:02,949 | INFO     | intersect: 2493082.0476190476
[2026-04-08 20:07:05] 2026-04-09 00:06:02,950 | INFO     | chi2: 1.4727340888155813
[2026-04-08 20:07:05] 2026-04-09 00:06:02,950 | INFO     | sum of square deviations: 549294020.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,951 | INFO     | sum of deviations: 16078156313.000002
[2026-04-08 20:07:05] 2026-04-09 00:06:02,951 | INFO     | mean x (centered): 0.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,951 | INFO     | mean y: 2491358.5619834713
[2026-04-08 20:07:05] 2026-04-09 00:06:02,951 | INFO     | intersect: 2491358.5619834713
[2026-04-08 20:07:05] 2026-04-09 00:06:02,951 | INFO     | chi2: 1.47505495514283
[2026-04-08 20:07:05] 2026-04-09 00:06:02,951 | INFO     | current chi2=1.47505495514283 (change=-0.15758895953275706 %)
[2026-04-08 20:07:05] 2026-04-09 00:06:02,952 | INFO     | right removable region: 120
[2026-04-08 20:07:05] 2026-04-09 00:06:02,952 | INFO     | sum of square deviations: 549294020.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,952 | INFO     | sum of deviations: -1519816585.9999995
[2026-04-08 20:07:05] 2026-04-09 00:06:02,953 | INFO     | mean x (centered): 0.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,953 | INFO     | mean y: 2531869.644628099
[2026-04-08 20:07:05] 2026-04-09 00:06:02,953 | INFO     | intersect: 2531869.644628099
[2026-04-08 20:07:05] 2026-04-09 00:06:02,953 | INFO     | chi2: 0.043019212916862795
[2026-04-08 20:07:05] 2026-04-09 00:06:02,953 | INFO     | current chi2=0.043019212916862795 (change=97.07895585200583 %)
[2026-04-08 20:07:05] 2026-04-09 00:06:02,953 | INFO     | sum of square deviations: 483971865.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,954 | INFO     | sum of deviations: 644974593.9999999
[2026-04-08 20:07:05] 2026-04-09 00:06:02,954 | INFO     | mean x (centered): 0.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,954 | INFO     | mean y: 2526701.0689655175
[2026-04-08 20:07:05] 2026-04-09 00:06:02,954 | INFO     | intersect: 2526701.0689655175
[2026-04-08 20:07:05] 2026-04-09 00:06:02,955 | INFO     | chi2: 0.02068970424322585
[2026-04-08 20:07:05] 2026-04-09 00:06:02,955 | INFO     | current chi2=0.02068970424322585 (change=51.90589775965929 %)
[2026-04-08 20:07:05] 2026-04-09 00:06:02,955 | INFO     | sum of square deviations: 424045160.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,955 | INFO     | sum of deviations: 1785586753.9999998
[2026-04-08 20:07:05] 2026-04-09 00:06:02,956 | INFO     | mean x (centered): 0.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,956 | INFO     | mean y: 2523929.918918919
[2026-04-08 20:07:05] 2026-04-09 00:06:02,956 | INFO     | intersect: 2523929.918918919
[2026-04-08 20:07:05] 2026-04-09 00:06:02,956 | INFO     | chi2: 0.00055898883024831
[2026-04-08 20:07:05] 2026-04-09 00:06:02,956 | INFO     | current chi2=0.00055898883024831 (change=97.29822706174578 %)
[2026-04-08 20:07:05] 2026-04-09 00:06:02,956 | INFO     | sum of square deviations: 369281342.5
[2026-04-08 20:07:05] 2026-04-09 00:06:02,957 | INFO     | sum of deviations: 1324028668.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,957 | INFO     | mean x (centered): 0.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,957 | INFO     | mean y: 2525207.1886792453
[2026-04-08 20:07:05] 2026-04-09 00:06:02,957 | INFO     | intersect: 2525207.1886792453
[2026-04-08 20:07:05] 2026-04-09 00:06:02,958 | INFO     | chi2: 0.00033941264620683477
[2026-04-08 20:07:05] 2026-04-09 00:06:02,958 | INFO     | current chi2=0.00033941264620683477 (change=39.28096093511147 %)
[2026-04-08 20:07:05] 2026-04-09 00:06:02,958 | INFO     | sum of square deviations: 319447850.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,958 | INFO     | sum of deviations: 1017880770.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,959 | INFO     | mean x (centered): 0.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,959 | INFO     | mean y: 2526143.99009901
[2026-04-08 20:07:05] 2026-04-09 00:06:02,959 | INFO     | intersect: 2526143.99009901
[2026-04-08 20:07:05] 2026-04-09 00:06:02,959 | INFO     | chi2: 0.0002798604768593392
[2026-04-08 20:07:05] 2026-04-09 00:06:02,959 | INFO     | current chi2=0.0002798604768593392 (change=17.54565423917796 %)
[2026-04-08 20:07:05] 2026-04-09 00:06:02,959 | INFO     | left removable region: 25
[2026-04-08 20:07:05] 2026-04-09 00:06:02,959 | INFO     | sum of square deviations: 265828240.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,960 | INFO     | sum of deviations: 864289419.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,960 | INFO     | mean x (centered): 0.0
[2026-04-08 20:07:05] 2026-04-09 00:06:02,960 | INFO     | mean y: 2525626.094736842
[2026-04-08 20:07:05] 2026-04-09 00:06:02,960 | INFO     | intersect: 2525626.094736842
[2026-04-08 20:07:05] 2026-04-09 00:06:02,960 | INFO     | chi2: 0.0002576029666478084
[2026-04-08 20:07:05] 2026-04-09 00:06:02,961 | INFO     | current memory leak: 3.25 B/s (using 95 data points, chi2=0.00)
[2026-04-08 20:07:05] 2026-04-09 00:06:02,961 | INFO     | could have reported an average CPU frequency of 1712 MHz (8 samples)
[2026-04-08 20:07:05] 2026-04-09 00:06:02,961 | INFO     | ..............................
[2026-04-08 20:07:05] 2026-04-09 00:06:02,961 | INFO     | . Timing measurements:
[2026-04-08 20:07:05] 2026-04-09 00:06:02,961 | INFO     | . get job = 0 s
[2026-04-08 20:07:05] 2026-04-09 00:06:02,962 | INFO     | . initial setup = 8 s
[2026-04-08 20:07:05] 2026-04-09 00:06:02,962 | INFO     | . payload setup = 17 s
[2026-04-08 20:07:05] 2026-04-09 00:06:02,962 | INFO     | . stage-in = 0 s
[2026-04-08 20:07:05] 2026-04-09 00:06:02,962 | INFO     | . payload execution = 7660 s
[2026-04-08 20:07:05] 2026-04-09 00:06:02,962 | INFO     | . stage-out = 0 s
[2026-04-08 20:07:05] 2026-04-09 00:06:02,962 | INFO     | . log creation = 0 s
[2026-04-08 20:07:05] 2026-04-09 00:06:02,962 | INFO     | ..............................
[2026-04-08 20:07:05] 2026-04-09 00:06:03,045 | INFO     | 
[2026-04-08 20:07:05] 2026-04-09 00:06:03,045 | INFO     | job summary report
[2026-04-08 20:07:05] 2026-04-09 00:06:03,045 | INFO     | --------------------------------------------------
[2026-04-08 20:07:05] 2026-04-09 00:06:03,045 | INFO     | PanDA job id: 7082812785
[2026-04-08 20:07:05] 2026-04-09 00:06:03,045 | INFO     | task id: 49263208
[2026-04-08 20:07:05] 2026-04-09 00:06:03,046 | INFO     | errors: (none)
[2026-04-08 20:07:05] 2026-04-09 00:06:03,046 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-08 20:07:05] 2026-04-09 00:06:03,046 | INFO     | pilot state: finished 
[2026-04-08 20:07:05] 2026-04-09 00:06:03,046 | INFO     | transexitcode: 0
[2026-04-08 20:07:05] 2026-04-09 00:06:03,046 | INFO     | exeerrorcode: 0
[2026-04-08 20:07:05] 2026-04-09 00:06:03,046 | INFO     | exeerrordiag: 
[2026-04-08 20:07:05] 2026-04-09 00:06:03,047 | INFO     | exitcode: 0
[2026-04-08 20:07:05] 2026-04-09 00:06:03,047 | INFO     | exitmsg: OK
[2026-04-08 20:07:05] 2026-04-09 00:06:03,047 | INFO     | cpuconsumptiontime: 56628 s
[2026-04-08 20:07:05] 2026-04-09 00:06:03,047 | INFO     | nevents: 400
[2026-04-08 20:07:05] 2026-04-09 00:06:03,047 | INFO     | neventsw: 0
[2026-04-08 20:07:05] 2026-04-09 00:06:03,047 | INFO     | pid: 10687
[2026-04-08 20:07:05] 2026-04-09 00:06:03,048 | INFO     | pgrp: 10687
[2026-04-08 20:07:05] 2026-04-09 00:06:03,048 | INFO     | corecount: 8
[2026-04-08 20:07:05] 2026-04-09 00:06:03,048 | INFO     | event service: False
[2026-04-08 20:07:05] 2026-04-09 00:06:03,048 | INFO     | sizes: {0: 2279891, 1: 2281493, 11: 2281493, 7681: 2309196, 7682: 2318194, 7685: 2318572}
[2026-04-08 20:07:05] 2026-04-09 00:06:03,048 | INFO     | --------------------------------------------------
[2026-04-08 20:07:05] 2026-04-09 00:06:03,048 | INFO     | 
[2026-04-08 20:07:05] 2026-04-09 00:06:03,049 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-08 20:07:05] 2026-04-09 00:06:03,078 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,079 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,079 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,079 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,079 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,080 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,080 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,080 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,080 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,080 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,080 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,081 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,081 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,082 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-08 20:07:05] 2026-04-09 00:06:03,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,082 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-08 20:07:05] 2026-04-09 00:06:03,082 | INFO     | job 7082812785 has completed (purged errors)
[2026-04-08 20:07:05] 2026-04-09 00:06:03,082 | INFO     | overall cleanup function is called
[2026-04-08 20:07:05] 2026-04-09 00:06:04,090 | INFO     | --- collectZombieJob: --- 10, [10687]
[2026-04-08 20:07:05] 2026-04-09 00:06:04,091 | INFO     | zombie collector waiting for pid 10687
[2026-04-08 20:07:05] 2026-04-09 00:06:04,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-08 20:07:05] 2026-04-09 00:06:04,091 | INFO     | collected zombie processes
[2026-04-08 20:07:05] 2026-04-09 00:06:04,091 | INFO     | will attempt to kill all subprocesses of pid=10687
[2026-04-08 20:07:05] 2026-04-09 00:06:04,165 | INFO     | process IDs to be killed: [10687] (in reverse order)
[2026-04-08 20:07:05] 2026-04-09 00:06:04,220 | WARNING  | found no corresponding commands to process id(s)
[2026-04-08 20:07:05] 2026-04-09 00:06:04,221 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-08 20:07:05] 2026-04-09 00:06:04,224 | INFO     | did not find any defunct processes belonging to 10687
[2026-04-08 20:07:05] 2026-04-09 00:06:04,226 | INFO     | did not find any defunct processes belonging to 10687
[2026-04-08 20:07:05] 2026-04-09 00:06:04,227 | INFO     | Ready for new job
[2026-04-08 20:07:05] 2026-04-09 00:06:04,228 | INFO     | **************************************
[2026-04-08 20:07:05] 2026-04-09 00:06:04,228 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-08 20:07:05] 2026-04-09 00:06:04,228 | INFO     | **************************************
[2026-04-08 20:07:05] 2026-04-09 00:06:04,228 | INFO     | 
[2026-04-08 20:07:05] 2026-04-09 00:06:04,229 | INFO     | architecture information:
[2026-04-08 20:07:05] 2026-04-09 00:06:04,229 | INFO     | executing command: cat /etc/os-release
[2026-04-08 20:07:05] 2026-04-09 00:06:04,247 | INFO     | cat /etc/os-release:
[2026-04-08 20:07:05] NAME="CentOS Linux"
[2026-04-08 20:07:05] VERSION="7 (Core)"
[2026-04-08 20:07:05] ID="centos"
[2026-04-08 20:07:05] ID_LIKE="rhel fedora"
[2026-04-08 20:07:05] VERSION_ID="7"
[2026-04-08 20:07:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-08 20:07:05] ANSI_COLOR="0;31"
[2026-04-08 20:07:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-08 20:07:05] HOME_URL="https://www.centos.org/"
[2026-04-08 20:07:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-08 20:07:05] 
[2026-04-08 20:07:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-08 20:07:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-08 20:07:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-08 20:07:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-08 20:07:05] 
[2026-04-08 20:07:05] 2026-04-09 00:06:04,248 | INFO     | **************************************
[2026-04-08 20:07:05] 2026-04-09 00:06:04,749 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-08 20:07:05] 2026-04-09 00:06:04,769 | INFO     | sufficient remaining disk space (18539872256 B)
[2026-04-08 20:07:05] 2026-04-09 00:06:04,770 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-08 20:07:05] 2026-04-09 00:06:04,770 | INFO     | current server update state: UPDATING_FINAL
[2026-04-08 20:07:05] 2026-04-09 00:06:04,770 | INFO     | update_server=False
[2026-04-08 20:07:05] 2026-04-09 00:06:04,770 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-08 20:07:05] 2026-04-09 00:06:04,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-08 20:07:05] 2026-04-09 00:06:04,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-08 20:07:05] 2026-04-09 00:06:04,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-08 20:07:05] 2026-04-09 00:06:04,772 | INFO     | aborting loop
[2026-04-08 20:07:05] 2026-04-09 00:06:05,073 | INFO     | all data control threads have been joined
[2026-04-08 20:07:05] 2026-04-09 00:06:05,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-08 20:07:05] 2026-04-09 00:06:05,774 | INFO     | [job] retrieve thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:05,777 | INFO     | [job] queue monitor thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:05,778 | INFO     | [job] job monitor thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:06,079 | INFO     | [data] control thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:06,154 | INFO     | all payload control threads have been joined
[2026-04-08 20:07:05] 2026-04-09 00:06:06,159 | INFO     | [payload] validate_post thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:06,467 | INFO     | all job control threads have been joined
[2026-04-08 20:07:05] 2026-04-09 00:06:06,690 | INFO     | [job] create_data_payload thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:06,815 | INFO     | [job] validate thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:07,064 | INFO     | [payload] validate_pre thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:07,159 | INFO     | [payload] control thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:07,196 | INFO     | [payload] failed_post thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:07,222 | INFO     | [data] copytool_out thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:07,227 | INFO     | [payload] execute_payloads thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:07,236 | INFO     | [data] copytool_in thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:07,469 | INFO     | [job] control thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:08,777 | INFO     | [data] queue_monitor thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:15,320 | INFO     | job.realtimelogging is not enabled
[2026-04-08 20:07:05] 2026-04-09 00:06:16,325 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-08 20:07:05] 2026-04-09 00:06:35,409 | INFO     | PID=6209 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-08 20:07:05] 2026-04-09 00:06:35,411 | INFO     | found 0 job(s) in 20 queues
[2026-04-08 20:07:05] 2026-04-09 00:06:35,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-08 20:07:05] 2026-04-09 00:06:35,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-08 20:07:05] 2026-04-09 00:06:58,323 | INFO     | [monitor] cgroup control has ended
[2026-04-08 20:07:05] 2026-04-09 00:07:00,209 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140494129776448)>', '<ExcThread(monitor, started 140493463738112)>']
[2026-04-08 20:07:05] 2026-04-09 00:07:00,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-08 20:07:05] 2026-04-09 00:07:00,532 | INFO     | [monitor] control thread has ended
[2026-04-08 20:07:05] 2026-04-09 00:07:05,235 | INFO     | all workflow threads have been joined
[2026-04-08 20:07:05] 2026-04-09 00:07:05,235 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-08 20:07:05] 2026-04-09 00:07:05,236 | INFO     | traces error code: 0
[2026-04-08 20:07:05] 2026-04-09 00:07:05,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-08 20:07:05] 2026-04-09 00:07:05,353 [wrapper] ==== pilot stdout END ====
[2026-04-08 20:07:05] 2026-04-09 00:07:05,358 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-08 20:07:05] 2026-04-09 00:07:05,363 [wrapper] pilotpid: 6209
[2026-04-08 20:07:05] 2026-04-09 00:07:05,368 [wrapper] Pilot exit status: 0
[2026-04-08 20:07:05] 2026-04-09 00:07:05,384 [wrapper] pandaids: 7082812785
[2026-04-08 20:07:05] 2026-04-09 00:07:05,436 [wrapper] cleanup supervisor_pilot 23966 6210
[2026-04-08 20:07:05] 2026-04-09 00:07:05,441 [wrapper] Test setup, not cleaning
[2026-04-08 20:07:05] 2026-04-09 00:07:05,445 [wrapper] apfmon messages muted
[2026-04-08 20:07:05] 2026-04-09 00:07:05,450 [wrapper] ==== wrapper stdout END ====
[2026-04-08 20:07:05] 2026-04-09 00:07:05,455 [wrapper] ==== wrapper stderr END ====
[2026-04-08 20:07:05]  *** Error codes and diagnostics ***
[2026-04-08 20:07:05]     "exeErrorCode": 0,
[2026-04-08 20:07:05]     "pilotErrorCode": 0,
[2026-04-08 20:07:05]  *** Listing of results directory ***
[2026-04-08 20:07:05] total 417200
[2026-04-08 20:07:05] -rwx------ 1 boincer umatlas     36322 Apr  8 14:45 runpilot2-wrapper.sh
[2026-04-08 20:07:05] -rw-r--r-- 1 boincer umatlas    644190 Apr  8 14:52 pilot3.tar.gz
[2026-04-08 20:07:05] -rw-r--r-- 1 boincer umatlas      5094 Apr  8 15:16 queuedata.json
[2026-04-08 20:07:05] -rw-r--r-- 1 boincer umatlas       100 Apr  8 17:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-08 20:07:05] -rwxr-xr-x 1 boincer umatlas      7986 Apr  8 17:57 run_atlas
[2026-04-08 20:07:05] -rw-r--r-- 1 boincer umatlas       105 Apr  8 17:57 job.xml
[2026-04-08 20:07:05] -rw-r--r-- 2 boincer umatlas 223881467 Apr  8 17:57 EVNT.49263206._000226.pool.root.1
[2026-04-08 20:07:05] -rw-r--r-- 2 boincer umatlas     15665 Apr  8 17:57 start_atlas.sh
[2026-04-08 20:07:05] drwxrwx--x 2 boincer umatlas      4096 Apr  8 17:57 shared
[2026-04-08 20:07:05] -rw-r--r-- 2 boincer umatlas    656928 Apr  8 17:57 input.tar.gz
[2026-04-08 20:07:05] -rw-r--r-- 1 boincer umatlas         0 Apr  8 17:57 boinc_lockfile
[2026-04-08 20:07:05] -rw-r--r-- 1 boincer umatlas      2574 Apr  8 17:57 pandaJob.out
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas        57 Apr  8 17:57 setup.sh.local
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas    997887 Apr  8 17:57 agis_schedconf.cvmfs.json
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas   1511579 Apr  8 17:57 agis_ddmendpoints.agis.ALL.json
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas       430 Apr  8 17:57 workernode_map.json
[2026-04-08 20:07:05] drwx------ 5 boincer umatlas      4096 Apr  8 17:57 pilot3
[2026-04-08 20:07:05] -rw-r--r-- 1 boincer umatlas      5824 Apr  8 20:02 init_data.xml
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas 197136617 Apr  8 20:05 HITS.49263208._024259.pool.root.1
[2026-04-08 20:07:05] -rw-r--r-- 1 boincer umatlas       488 Apr  8 20:05 boinc_task_state.xml
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas      1047 Apr  8 20:05 memory_monitor_summary.json
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas    340870 Apr  8 20:05 log.49263208._024259.job.log.tgz.1
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas      6412 Apr  8 20:06 heartbeat_new.json
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas      6303 Apr  8 20:06 heartbeat.json
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas        95 Apr  8 20:06 pilot_heartbeat.json
[2026-04-08 20:07:05] -rw-r--r-- 1 boincer umatlas      8192 Apr  8 20:06 boinc_mmap_file
[2026-04-08 20:07:05] -rw-r--r-- 1 boincer umatlas        27 Apr  8 20:06 wrapper_checkpoint.txt
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas      4812 Apr  8 20:07 pilotlog.txt
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas    722769 Apr  8 20:07 log.49263208._024259.job.log.1
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas       357 Apr  8 20:07 output.list
[2026-04-08 20:07:05] -rw-r--r-- 1 boincer umatlas       410 Apr  8 20:07 runtime_log
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas   1085440 Apr  8 20:07 result.tar.gz
[2026-04-08 20:07:05] -rw-r--r-- 1 boincer umatlas      8958 Apr  8 20:07 runtime_log.err
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas       658 Apr  8 20:07 a230132aaf2e.diag
[2026-04-08 20:07:05] -rw-r--r-- 1 boincer umatlas     20709 Apr  8 20:07 stderr.txt
[2026-04-08 20:07:05] HITS file was successfully produced:
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas 197136617 Apr  8 20:05 shared/HITS.pool.root.1
[2026-04-08 20:07:05]  *** Contents of shared directory: ***
[2026-04-08 20:07:05] total 412880
[2026-04-08 20:07:05] -rw-r--r-- 2 boincer umatlas 223881467 Apr  8 17:57 ATLAS.root_0
[2026-04-08 20:07:05] -rw-r--r-- 2 boincer umatlas     15665 Apr  8 17:57 start_atlas.sh
[2026-04-08 20:07:05] -rw-r--r-- 2 boincer umatlas    656928 Apr  8 17:57 input.tar.gz
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas 197136617 Apr  8 20:05 HITS.pool.root.1
[2026-04-08 20:07:05] -rw------- 1 boincer umatlas   1085440 Apr  8 20:07 result.tar.gz
20:07:06 (2046): run_atlas exited; CPU time 56581.368179
20:07:06 (2046): called boinc_finish(0)

</stderr_txt>
]]>

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