Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:51:41 (2930): wrapper (7.7.26015): starting
19:51:41 (2930): wrapper: running run_atlas (--nthreads 8)
[2026-04-09 19:51:41] Arguments: --nthreads 8
[2026-04-09 19:51:41] Threads: 8
[2026-04-09 19:51:41] Checking for CVMFS
[2026-04-09 19:51:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-09 19:51:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-09 19:51:45] Running cvmfs_config stat atlas.cern.ch
[2026-04-09 19:51:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-09 19:51:46] 2.11.2.0 4392 11757 97664 158267 2 53 20458050 25165824 4688 130560 0 3763801 99.943 1122587 6042 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-09 19:51:46] CVMFS is ok
[2026-04-09 19:51:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-09 19:51:46] Checking for apptainer binary...
[2026-04-09 19:51:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-09 19:51:46] Running /usr/bin/apptainer --version
[2026-04-09 19:51:46] apptainer version 1.3.2-1.el7
[2026-04-09 19:51:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-09 19:52:16] cg-vwn449.simple-grid.lan
[2026-04-09 19:52:16] apptainer works
[2026-04-09 19:52:16] Set ATHENA_PROC_NUMBER=8
[2026-04-09 19:52:16] Set ATHENA_CORE_NUMBER=8
[2026-04-09 19:52:16] Starting ATLAS job with PandaID=7082844164
[2026-04-09 19:52:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-10 00:01:58]  *** The last 200 lines of the pilot log: ***
[2026-04-10 00:01:58] 2026-04-09 22:00:45,856 | INFO     | this job has now completed (state=finished)
[2026-04-10 00:01:58] 2026-04-09 22:00:45,856 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-10 00:01:58] 2026-04-09 22:00:45,856 | INFO     | log transfer has been attempted: DONE
[2026-04-10 00:01:58] 2026-04-09 22:00:45,856 | INFO     | job 7082844164 has finished - writing final server update
[2026-04-10 00:01:58] 2026-04-09 22:00:45,857 | INFO     | total number of processed events: 400 (read)
[2026-04-10 00:01:58] 2026-04-09 22:00:45,859 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7082844164/memory_monitor_summary.json (trf name=prmon)
[2026-04-10 00:01:58] 2026-04-09 22:00:45,859 | INFO     | extracted standard info from prmon json
[2026-04-10 00:01:58] 2026-04-09 22:00:45,860 | INFO     | extracted standard memory fields from prmon json
[2026-04-10 00:01:58] 2026-04-09 22:00:45,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-10 00:01:58] 2026-04-09 22:00:45,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-10 00:01:58] 2026-04-09 22:00:45,865 | INFO     | fitting pss+swap vs Time
[2026-04-10 00:01:58] 2026-04-09 22:00:45,866 | INFO     | sum of square deviations: 4024149870.0
[2026-04-10 00:01:58] 2026-04-09 22:00:45,868 | INFO     | sum of deviations: 97493672973.99997
[2026-04-10 00:01:58] 2026-04-09 22:00:45,868 | INFO     | mean x (centered): 0.0
[2026-04-10 00:01:58] 2026-04-09 22:00:45,868 | INFO     | mean y: 2424850.9276595744
[2026-04-10 00:01:58] 2026-04-09 22:00:45,869 | INFO     | intersect: 2424850.9276595744
[2026-04-10 00:01:58] 2026-04-09 22:00:45,869 | INFO     | chi2: 6.824377772357281
[2026-04-10 00:01:58] 2026-04-09 22:00:45,874 | INFO     | sum of square deviations: 3772712597.5
[2026-04-10 00:01:58] 2026-04-09 22:00:45,876 | INFO     | sum of deviations: 110771891345.0
[2026-04-10 00:01:58] 2026-04-09 22:00:45,876 | INFO     | mean x (centered): 0.0
[2026-04-10 00:01:58] 2026-04-09 22:00:45,877 | INFO     | mean y: 2432741.9391304348
[2026-04-10 00:01:58] 2026-04-09 22:00:45,877 | INFO     | intersect: 2432741.9391304348
[2026-04-10 00:01:58] 2026-04-09 22:00:45,877 | INFO     | chi2: 6.108749387338499
[2026-04-10 00:01:58] 2026-04-09 22:00:45,877 | INFO     | current chi2=6.108749387338499 (change=10.486353611863281 %)
[2026-04-10 00:01:58] 2026-04-09 22:00:45,877 | INFO     | right removable region: 229
[2026-04-10 00:01:58] 2026-04-09 22:00:45,878 | INFO     | sum of square deviations: 3772712597.5
[2026-04-10 00:01:58] 2026-04-09 22:00:45,880 | INFO     | sum of deviations: 15485947512.0
[2026-04-10 00:01:58] 2026-04-09 22:00:45,880 | INFO     | mean x (centered): 0.0
[2026-04-10 00:01:58] 2026-04-09 22:00:45,880 | INFO     | mean y: 2474559.9913043478
[2026-04-10 00:01:58] 2026-04-09 22:00:45,880 | INFO     | intersect: 2474559.9913043478
[2026-04-10 00:01:58] 2026-04-09 22:00:45,881 | INFO     | chi2: 1.9234301051375842
[2026-04-10 00:01:58] 2026-04-09 22:00:45,881 | INFO     | current chi2=1.9234301051375842 (change=71.81530435011085 %)
[2026-04-10 00:01:58] 2026-04-09 22:00:45,882 | INFO     | sum of square deviations: 3531973200.0
[2026-04-10 00:01:58] 2026-04-09 22:00:45,884 | INFO     | sum of deviations: -17508752042.0
[2026-04-10 00:01:58] 2026-04-09 22:00:45,884 | INFO     | mean x (centered): 0.0
[2026-04-10 00:01:58] 2026-04-09 22:00:45,884 | INFO     | mean y: 2495278.7155555557
[2026-04-10 00:01:58] 2026-04-09 22:00:45,884 | INFO     | intersect: 2495278.7155555557
[2026-04-10 00:01:58] 2026-04-09 22:00:45,885 | INFO     | chi2: 0.8027889703941226
[2026-04-10 00:01:58] 2026-04-09 22:00:45,885 | INFO     | current chi2=0.8027889703941226 (change=58.26263880086776 %)
[2026-04-10 00:01:58] 2026-04-09 22:00:45,885 | INFO     | sum of square deviations: 3301699115.0
[2026-04-10 00:01:58] 2026-04-09 22:00:45,887 | INFO     | sum of deviations: -19836709072.0
[2026-04-10 00:01:58] 2026-04-09 22:00:45,887 | INFO     | mean x (centered): 0.0
[2026-04-10 00:01:58] 2026-04-09 22:00:45,887 | INFO     | mean y: 2496814.654545455
[2026-04-10 00:01:58] 2026-04-09 22:00:45,888 | INFO     | intersect: 2496814.654545455
[2026-04-10 00:01:58] 2026-04-09 22:00:45,888 | INFO     | chi2: 0.7965977679481961
[2026-04-10 00:01:58] 2026-04-09 22:00:45,888 | INFO     | current chi2=0.7965977679481961 (change=0.771211697500888 %)
[2026-04-10 00:01:58] 2026-04-09 22:00:45,888 | INFO     | left removable region: 15
[2026-04-10 00:01:58] 2026-04-09 22:00:45,889 | INFO     | sum of square deviations: 3038856977.5
[2026-04-10 00:01:58] 2026-04-09 22:00:45,891 | INFO     | sum of deviations: -4955076512.499999
[2026-04-10 00:01:58] 2026-04-09 22:00:45,891 | INFO     | mean x (centered): 0.0
[2026-04-10 00:01:58] 2026-04-09 22:00:45,891 | INFO     | mean y: 2506943.574766355
[2026-04-10 00:01:58] 2026-04-09 22:00:45,891 | INFO     | intersect: 2506943.574766355
[2026-04-10 00:01:58] 2026-04-09 22:00:45,892 | INFO     | chi2: 0.007073139936951653
[2026-04-10 00:01:58] 2026-04-09 22:00:45,892 | INFO     | current memory leak: -1.63 B/s (using 214 data points, chi2=0.01)
[2026-04-10 00:01:58] 2026-04-09 22:00:45,892 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-10 00:01:58] 2026-04-09 22:00:45,893 | INFO     | ..............................
[2026-04-10 00:01:58] 2026-04-09 22:00:45,893 | INFO     | . Timing measurements:
[2026-04-10 00:01:58] 2026-04-09 22:00:45,893 | INFO     | . get job = 0 s
[2026-04-10 00:01:58] 2026-04-09 22:00:45,893 | INFO     | . initial setup = 105 s
[2026-04-10 00:01:58] 2026-04-09 22:00:45,893 | INFO     | . payload setup = 162 s
[2026-04-10 00:01:58] 2026-04-09 22:00:45,893 | INFO     | . stage-in = 0 s
[2026-04-10 00:01:58] 2026-04-09 22:00:45,893 | INFO     | . payload execution = 14415 s
[2026-04-10 00:01:58] 2026-04-09 22:00:45,893 | INFO     | . stage-out = 7 s
[2026-04-10 00:01:58] 2026-04-09 22:00:45,894 | INFO     | . log creation = 1 s
[2026-04-10 00:01:58] 2026-04-09 22:00:45,894 | INFO     | ..............................
[2026-04-10 00:01:58] 2026-04-09 22:00:46,048 | INFO     | 
[2026-04-10 00:01:58] 2026-04-09 22:00:46,049 | INFO     | job summary report
[2026-04-10 00:01:58] 2026-04-09 22:00:46,049 | INFO     | --------------------------------------------------
[2026-04-10 00:01:58] 2026-04-09 22:00:46,049 | INFO     | PanDA job id: 7082844164
[2026-04-10 00:01:58] 2026-04-09 22:00:46,049 | INFO     | task id: 49263208
[2026-04-10 00:01:58] 2026-04-09 22:00:46,049 | INFO     | errors: (none)
[2026-04-10 00:01:58] 2026-04-09 22:00:46,049 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-10 00:01:58] 2026-04-09 22:00:46,049 | INFO     | pilot state: finished 
[2026-04-10 00:01:58] 2026-04-09 22:00:46,051 | INFO     | transexitcode: 0
[2026-04-10 00:01:58] 2026-04-09 22:00:46,051 | INFO     | exeerrorcode: 0
[2026-04-10 00:01:58] 2026-04-09 22:00:46,051 | INFO     | exeerrordiag: 
[2026-04-10 00:01:58] 2026-04-09 22:00:46,051 | INFO     | exitcode: 0
[2026-04-10 00:01:58] 2026-04-09 22:00:46,051 | INFO     | exitmsg: OK
[2026-04-10 00:01:58] 2026-04-09 22:00:46,051 | INFO     | cpuconsumptiontime: 55384 s
[2026-04-10 00:01:58] 2026-04-09 22:00:46,051 | INFO     | nevents: 400
[2026-04-10 00:01:58] 2026-04-09 22:00:46,051 | INFO     | neventsw: 0
[2026-04-10 00:01:58] 2026-04-09 22:00:46,052 | INFO     | pid: 11571
[2026-04-10 00:01:58] 2026-04-09 22:00:46,052 | INFO     | pgrp: 11571
[2026-04-10 00:01:58] 2026-04-09 22:00:46,052 | INFO     | corecount: 8
[2026-04-10 00:01:58] 2026-04-09 22:00:46,052 | INFO     | event service: False
[2026-04-10 00:01:58] 2026-04-09 22:00:46,052 | INFO     | sizes: {0: 2279611, 1: 2280068, 2: 2281496, 12: 2281524, 14582: 2312276, 14590: 2321458, 14591: 2321596}
[2026-04-10 00:01:58] 2026-04-09 22:00:46,052 | INFO     | --------------------------------------------------
[2026-04-10 00:01:58] 2026-04-09 22:00:46,052 | INFO     | 
[2026-04-10 00:01:58] 2026-04-09 22:00:46,053 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-04-10 00:01:58] 2026-04-09 22:00:46,466 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,466 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,466 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,466 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,468 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-10 00:01:58] 2026-04-09 22:00:46,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,468 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-10 00:01:58] 2026-04-09 22:00:46,468 | INFO     | job 7082844164 has completed (purged errors)
[2026-04-10 00:01:58] 2026-04-09 22:00:46,468 | INFO     | overall cleanup function is called
[2026-04-10 00:01:58] 2026-04-09 22:00:47,478 | INFO     | --- collectZombieJob: --- 10, [11571]
[2026-04-10 00:01:58] 2026-04-09 22:00:47,478 | INFO     | zombie collector waiting for pid 11571
[2026-04-10 00:01:58] 2026-04-09 22:00:47,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-10 00:01:58] 2026-04-09 22:00:47,478 | INFO     | collected zombie processes
[2026-04-10 00:01:58] 2026-04-09 22:00:47,478 | INFO     | will attempt to kill all subprocesses of pid=11571
[2026-04-10 00:01:58] 2026-04-09 22:00:47,606 | INFO     | process IDs to be killed: [11571] (in reverse order)
[2026-04-10 00:01:58] 2026-04-09 22:00:48,391 | WARNING  | found no corresponding commands to process id(s)
[2026-04-10 00:01:58] 2026-04-09 22:00:48,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-10 00:01:58] 2026-04-09 22:00:48,395 | INFO     | did not find any defunct processes belonging to 11571
[2026-04-10 00:01:58] 2026-04-09 22:00:48,399 | INFO     | did not find any defunct processes belonging to 11571
[2026-04-10 00:01:58] 2026-04-09 22:00:48,399 | INFO     | Ready for new job
[2026-04-10 00:01:58] 2026-04-09 22:00:48,403 | INFO     | **************************************
[2026-04-10 00:01:58] 2026-04-09 22:00:48,404 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-10 00:01:58] 2026-04-09 22:00:48,404 | INFO     | **************************************
[2026-04-10 00:01:58] 2026-04-09 22:00:48,404 | INFO     | 
[2026-04-10 00:01:58] 2026-04-09 22:00:48,405 | INFO     | pilot is running in a VM
[2026-04-10 00:01:58] 2026-04-09 22:00:48,405 | INFO     | architecture information:
[2026-04-10 00:01:58] 2026-04-09 22:00:48,414 | INFO     | executing command: cat /etc/os-release
[2026-04-10 00:01:58] 2026-04-09 22:00:48,620 | INFO     | cat /etc/os-release:
[2026-04-10 00:01:58] NAME="CentOS Linux"
[2026-04-10 00:01:58] VERSION="7 (Core)"
[2026-04-10 00:01:58] ID="centos"
[2026-04-10 00:01:58] ID_LIKE="rhel fedora"
[2026-04-10 00:01:58] VERSION_ID="7"
[2026-04-10 00:01:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-10 00:01:58] ANSI_COLOR="0;31"
[2026-04-10 00:01:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-10 00:01:58] HOME_URL="https://www.centos.org/"
[2026-04-10 00:01:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-10 00:01:58] 
[2026-04-10 00:01:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-10 00:01:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-10 00:01:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-10 00:01:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-10 00:01:58] 
[2026-04-10 00:01:58] 2026-04-09 22:00:48,621 | INFO     | **************************************
[2026-04-10 00:01:58] 2026-04-09 22:00:49,124 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-04-10 00:01:58] 2026-04-09 22:00:49,364 | INFO     | sufficient remaining disk space (496620273664 B)
[2026-04-10 00:01:58] 2026-04-09 22:00:49,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-10 00:01:58] 2026-04-09 22:00:49,365 | INFO     | current server update state: UPDATING_FINAL
[2026-04-10 00:01:58] 2026-04-09 22:00:49,365 | INFO     | update_server=False
[2026-04-10 00:01:58] 2026-04-09 22:00:49,365 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-10 00:01:58] 2026-04-09 22:00:49,922 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-10 00:01:58] 2026-04-09 22:00:49,922 | INFO     | aborting loop
[2026-04-10 00:01:58] 2026-04-09 22:00:50,095 | INFO     | all payload control threads have been joined
[2026-04-10 00:01:58] 2026-04-09 22:00:50,162 | INFO     | all data control threads have been joined
[2026-04-10 00:01:58] 2026-04-09 22:00:50,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-10 00:01:58] 2026-04-09 22:00:50,372 | INFO     | [job] retrieve thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:50,683 | INFO     | [payload] validate_pre thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:50,756 | INFO     | [payload] failed_post thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:50,927 | INFO     | [job] job monitor thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:50,951 | INFO     | [payload] validate_post thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:50,970 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-10 00:01:58] 2026-04-09 22:00:51,014 | INFO     | all job control threads have been joined
[2026-04-10 00:01:58] 2026-04-09 22:00:51,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-10 00:01:58] 2026-04-09 22:00:51,101 | INFO     | [payload] control thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:51,122 | INFO     | [data] copytool_in thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:51,168 | INFO     | [data] control thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:51,468 | INFO     | [payload] execute_payloads thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:51,567 | INFO     | [job] validate thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:51,581 | INFO     | [job] create_data_payload thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:51,653 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:52,020 | INFO     | [job] control thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:52,067 | INFO     | [job] queue monitor thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:52,266 | INFO     | [data] copytool_out thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:00:54,978 | INFO     | [data] queue_monitor thread has finished
[2026-04-10 00:01:58] 2026-04-09 22:01:18,173 | INFO     | PID=7039 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-10 00:01:58] 2026-04-09 22:01:18,173 | INFO     | .. there are 9 such processes running
[2026-04-10 00:01:58] 2026-04-09 22:01:18,175 | INFO     | found 0 job(s) in 20 queues
[2026-04-10 00:01:58] 2026-04-09 22:01:18,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-10 00:01:58] 2026-04-09 22:01:18,176 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-10 00:01:58] 2026-04-09 22:01:47,479 | INFO     | [monitor] cgroup control has ended
[2026-04-10 00:01:58] 2026-04-09 22:01:49,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139653865867072)>', '<ExcThread(monitor, started 139653101364992)>']
[2026-04-10 00:01:58] 2026-04-09 22:01:49,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-10 00:01:58] 2026-04-09 22:01:49,359 | INFO     | [monitor] control thread has ended
[2026-04-10 00:01:58] 2026-04-09 22:01:54,187 | INFO     | all workflow threads have been joined
[2026-04-10 00:01:58] 2026-04-09 22:01:54,187 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-10 00:01:58] 2026-04-09 22:01:54,187 | INFO     | traces error code: 0
[2026-04-10 00:01:58] 2026-04-09 22:01:54,188 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-10 00:01:58] 2026-04-09 22:01:54,512 [wrapper] ==== pilot stdout END ====
[2026-04-10 00:01:58] 2026-04-09 22:01:54,609 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-10 00:01:58] 2026-04-09 22:01:54,704 [wrapper] pilotpid: 7039
[2026-04-10 00:01:58] 2026-04-09 22:01:54,811 [wrapper] Pilot exit status: 0
[2026-04-10 00:01:58] 2026-04-09 22:01:55,312 [wrapper] pandaids: 7082844164
[2026-04-10 00:01:58] 2026-04-09 22:01:56,464 [wrapper] cleanup supervisor_pilot 19509 7040
[2026-04-10 00:01:58] 2026-04-09 22:01:56,538 [wrapper] Test setup, not cleaning
[2026-04-10 00:01:58] 2026-04-09 22:01:56,607 [wrapper] apfmon messages muted
[2026-04-10 00:01:58] 2026-04-09 22:01:56,703 [wrapper] ==== wrapper stdout END ====
[2026-04-10 00:01:58] 2026-04-09 22:01:56,815 [wrapper] ==== wrapper stderr END ====
[2026-04-10 00:01:58]  *** Error codes and diagnostics ***
[2026-04-10 00:01:58]     "exeErrorCode": 0,
[2026-04-10 00:01:58]     "pilotErrorCode": 0,
[2026-04-10 00:01:58]  *** Listing of results directory ***
[2026-04-10 00:01:58] total 412224
[2026-04-10 00:01:58] -rw-r--r--. 1 boinc boinc    644190 Apr  8 21:55 pilot3.tar.gz
[2026-04-10 00:01:58] -rwx------. 1 boinc boinc     36322 Apr  8 22:04 runpilot2-wrapper.sh
[2026-04-10 00:01:58] -rw-r--r--. 1 boinc boinc      5094 Apr  8 22:09 queuedata.json
[2026-04-10 00:01:58] -rw-r--r--. 1 boinc boinc       100 Apr  9 19:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-10 00:01:58] -rwxr-xr-x. 1 boinc boinc      7986 Apr  9 19:51 run_atlas
[2026-04-10 00:01:58] -rw-r--r--. 1 boinc boinc       105 Apr  9 19:51 job.xml
[2026-04-10 00:01:58] -rw-r--r--. 1 boinc boinc      6306 Apr  9 19:51 init_data.xml
[2026-04-10 00:01:58] -rw-r--r--. 2 boinc boinc 220634277 Apr  9 19:51 EVNT.49263206._000456.pool.root.1
[2026-04-10 00:01:58] -rw-r--r--. 2 boinc boinc     15665 Apr  9 19:51 start_atlas.sh
[2026-04-10 00:01:58] drwxrwx--x. 2 boinc boinc        68 Apr  9 19:51 shared
[2026-04-10 00:01:58] -rw-r--r--. 2 boinc boinc    656930 Apr  9 19:51 input.tar.gz
[2026-04-10 00:01:58] -rw-r--r--. 1 boinc boinc         0 Apr  9 19:51 boinc_lockfile
[2026-04-10 00:01:58] -rw-r--r--. 1 boinc boinc      2575 Apr  9 19:52 pandaJob.out
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc       415 Apr  9 19:57 workernode_map.json
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc    997892 Apr  9 19:57 agis_schedconf.cvmfs.json
[2026-04-10 00:01:58] drwx------. 5 boinc boinc      4096 Apr  9 19:57 pilot3
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc 193970716 Apr  9 23:59 HITS.49263208._024966.pool.root.1
[2026-04-10 00:01:58] -rw-r--r--. 1 boinc boinc       488 Apr  9 23:59 boinc_task_state.xml
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc      1015 Apr 10 00:00 memory_monitor_summary.json
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc   1511579 Apr 10 00:00 agis_ddmendpoints.agis.ALL.json
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc    393496 Apr 10 00:00 log.49263208._024966.job.log.tgz.1
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc      6348 Apr 10 00:00 heartbeat_new.json
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc      6239 Apr 10 00:00 heartbeat.json
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc        95 Apr 10 00:01 pilot_heartbeat.json
[2026-04-10 00:01:58] -rw-r--r--. 1 boinc boinc      8192 Apr 10 00:01 boinc_mmap_file
[2026-04-10 00:01:58] -rw-r--r--. 1 boinc boinc        28 Apr 10 00:01 wrapper_checkpoint.txt
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc      4878 Apr 10 00:01 pilotlog.txt
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc   1338137 Apr 10 00:01 log.49263208._024966.job.log.1
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc       357 Apr 10 00:01 output.list
[2026-04-10 00:01:58] -rw-r--r--. 1 boinc boinc       410 Apr 10 00:01 runtime_log
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc   1751040 Apr 10 00:01 result.tar.gz
[2026-04-10 00:01:58] -rw-r--r--. 1 boinc boinc      8438 Apr 10 00:01 runtime_log.err
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc       656 Apr 10 00:01 b4e4b45b5c46.diag
[2026-04-10 00:01:58] -rw-r--r--. 1 boinc boinc     20611 Apr 10 00:01 stderr.txt
[2026-04-10 00:01:58] HITS file was successfully produced:
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc 193970716 Apr  9 23:59 shared/HITS.pool.root.1
[2026-04-10 00:01:58]  *** Contents of shared directory: ***
[2026-04-10 00:01:58] total 407264
[2026-04-10 00:01:58] -rw-r--r--. 2 boinc boinc 220634277 Apr  9 19:51 ATLAS.root_0
[2026-04-10 00:01:58] -rw-r--r--. 2 boinc boinc     15665 Apr  9 19:51 start_atlas.sh
[2026-04-10 00:01:58] -rw-r--r--. 2 boinc boinc    656930 Apr  9 19:51 input.tar.gz
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc 193970716 Apr  9 23:59 HITS.pool.root.1
[2026-04-10 00:01:58] -rw-------. 1 boinc boinc   1751040 Apr 10 00:01 result.tar.gz
00:01:59 (2930): run_atlas exited; CPU time 55611.815658
00:01:59 (2930): called boinc_finish(0)

</stderr_txt>
]]>

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