Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-08 19:09:02 (15172): vboxwrapper version 26210
2026-04-08 19:09:02 (15172): BOINC client version: 8.2.9
2026-04-08 19:09:03 (15172): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-04-08 19:09:04 (15172): Successfully copied 'init_data.xml' to the shared directory.
2026-04-08 19:09:04 (15172): Create VM. (boinc_fb4ff5bcd18b7af2, slot#1)
2026-04-08 19:09:05 (15172): Setting Memory Size for VM. (4600MB)
2026-04-08 19:09:06 (15172): Setting CPU Count for VM. (6)
2026-04-08 19:09:06 (15172): Setting Chipset Options for VM.
2026-04-08 19:09:06 (15172): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-08 19:09:06 (15172): Setting Boot Options for VM.
2026-04-08 19:09:07 (15172): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-08 19:09:07 (15172): Enabling VM Network Access.
2026-04-08 19:09:07 (15172): Disabling USB Support for VM.
2026-04-08 19:09:08 (15172): Disabling COM Port Support for VM.
2026-04-08 19:09:08 (15172): Disabling LPT Port Support for VM.
2026-04-08 19:09:08 (15172): Disabling Audio Support for VM.
2026-04-08 19:09:09 (15172): Disabling Clipboard Support for VM.
2026-04-08 19:09:09 (15172): Disabling Drag and Drop Support for VM.
2026-04-08 19:09:09 (15172): Adding storage controller(s) to VM.
2026-04-08 19:09:10 (15172): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-08 19:09:12 (15172): Adding VirtualBox Guest Additions to VM.
2026-04-08 19:09:12 (15172): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-08 19:09:12 (15172): forwarding host port 53368 to guest port 80
2026-04-08 19:09:13 (15172): Enabling remote desktop for VM.
2026-04-08 19:09:13 (15172): Required extension pack not installed, remote desktop not enabled.
2026-04-08 19:09:13 (15172): Enabling shared directory for VM.
2026-04-08 19:09:13 (15172): Starting VM using VBoxManage interface. (boinc_fb4ff5bcd18b7af2, slot#1)
2026-04-08 19:09:19 (15172): Successfully started VM. (PID = '18880')
2026-04-08 19:09:19 (15172): Reporting VM Process ID to BOINC.
2026-04-08 19:09:19 (15172): Guest Log: BIOS: VirtualBox 7.2.6
2026-04-08 19:09:19 (15172): Guest Log: CPUID EDX: 0x178bfbff
2026-04-08 19:09:19 (15172): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-08 19:09:19 (15172): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-08 19:09:19 (15172): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-08 19:09:19 (15172): Detected: Web Application Enabled (http://localhost:53368)
2026-04-08 19:09:19 (15172): Preference change detected
2026-04-08 19:09:19 (15172): Setting CPU throttle for VM. (50%)
2026-04-08 19:09:20 (15172): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-08 19:09:21 (15172): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-08 19:09:21 (15172): Guest Log: BIOS: Booting from Hard Disk...
2026-04-08 19:09:24 (15172): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-08 19:09:24 (15172): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-08 19:09:24 (15172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-08 19:09:33 (15172): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-08 19:09:33 (15172): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-08 19:09:43 (15172): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-08 19:09:43 (15172): Guest Log: 00:00:00.000174 main     Log opened 2026-04-08T19:09:41.933015000Z
2026-04-08 19:09:43 (15172): Guest Log: 00:00:00.000309 main     OS Product: Linux
2026-04-08 19:09:43 (15172): Guest Log: 00:00:00.000340 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-08 19:09:43 (15172): Guest Log: 00:00:00.000359 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-08 19:09:43 (15172): Guest Log: 00:00:00.000376 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-08 19:09:43 (15172): Guest Log: 00:00:00.000377 main     Process ID: 1339
2026-04-08 19:09:43 (15172): Guest Log: 00:00:00.000377 main     Package type: LINUX_64BITS_GENERIC
2026-04-08 19:09:43 (15172): Guest Log: 00:00:00.001064 main     5.2.32 r132073 started. Verbose level = 0
2026-04-08 19:09:43 (15172): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-08 19:09:43 (15172): Guest Log: [INFO] Mounting shared directory
2026-04-08 19:09:43 (15172): Guest Log: [INFO] Checking for init_data.xml
2026-04-08 19:09:53 (15172): Guest Log: 00:00:10.018859 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 896 414 000ns (GuestNow=1 775 671 793 039 111 000 ns GuestLast=1 775 675 381 935 525 000 ns fSetTimeLastLoop=true )
2026-04-08 19:09:58 (15172): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-08 19:09:58 (15172): Guest Log: [INFO] Detected branch: prod
2026-04-08 19:10:00 (15172): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-08 19:10:00 (15172): Guest Log: Copying input files
2026-04-08 19:10:01 (15172): Guest Log: Copied input files into RunAtlas.
2026-04-08 19:10:01 (15172): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-08 19:10:01 (15172): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-08 19:10:01 (15172): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-08 19:10:01 (15172): Guest Log: Further information can be found at the LHC@home message board.
2026-04-08 19:10:14 (15172): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-08 19:10:14 (15172): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-08 19:10:14 (15172): Guest Log: 2.6.3.0 1619 0 30156 158228 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-08 19:10:16 (15172): Guest Log: copied the webapp to /var/www
2026-04-08 19:10:16 (15172): Guest Log: ATHENA_PROC_NUMBER=6
2026-04-08 19:10:16 (15172): Guest Log: ATHENA_CORE_NUMBER=6
2026-04-08 19:10:17 (15172): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-08 19:10:18 (15172): Guest Log:  *** Starting ATLAS job. (PandaID=7083273939 taskID=49499601) ***
2026-04-08 20:49:20 (15172): Status Report: Elapsed Time: '6000.000000'
2026-04-08 20:49:20 (15172): Status Report: CPU Time: '20100.640625'
2026-04-08 21:50:28 (15172): Guest Log:  *** Job finished ***
2026-04-08 21:50:28 (15172): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:08,657 | INFO     | end of generic workflow (traces error code: 0)
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:08,657 | INFO     | traces error code: 0
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:08,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,127 | INFO     | PID=6062 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,129 | INFO     | found 0 job(s) in 20 queues
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,129 | CRITICAL | thread 'MainThread' is not alive
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,129 | INFO     | [monitor] control thread has ended
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,516 [wrapper] ==== pilot stdout END ====
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,521 [wrapper] ==== wrapper stdout RESUME ====
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,524 [wrapper] pilotpid: 6062
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,528 [wrapper] Pilot exit status: 0
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,673 [wrapper] pandaids: 7083273939
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,697 [wrapper] cleanup supervisor_pilot 26745 6063
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,701 [wrapper] Test setup, not cleaning
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,706 [wrapper] apfmon messages muted
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,710 [wrapper] ==== wrapper stdout END ====
2026-04-08 21:50:28 (15172): Guest Log: 2026-04-08 20:50:27,713 [wrapper] ==== wrapper stderr END ====
2026-04-08 21:50:28 (15172): Guest Log:  *** Error codes and diagnostics ***
2026-04-08 21:50:28 (15172): Guest Log:     "exeErrorCode": 0,
2026-04-08 21:50:28 (15172): Guest Log:     "pilotErrorCode": 0,
2026-04-08 21:50:28 (15172): Guest Log:  *** Listing of results directory ***
2026-04-08 21:50:28 (15172): Guest Log: total 174300
2026-04-08 21:50:28 (15172): Guest Log: -rw-r--r--. 1 atlas atlas    644190 Apr  8 17:15 pilot3.tar.gz
2026-04-08 21:50:28 (15172): Guest Log: -rwx------. 1 atlas atlas     36322 Apr  8 17:53 runpilot2-wrapper.sh
2026-04-08 21:50:28 (15172): Guest Log: -rw-r--r--. 1 atlas atlas      5094 Apr  8 17:55 queuedata.json
2026-04-08 21:50:28 (15172): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr  8 18:10 start_atlas.sh
2026-04-08 21:50:28 (15172): Guest Log: -rwxr-xr-x. 1 atlas atlas    656947 Apr  8 18:10 input.tar.gz
2026-04-08 21:50:28 (15172): Guest Log: -rwxr-xr-x. 1 atlas atlas      8495 Apr  8 18:10 init_data.xml
2026-04-08 21:50:28 (15172): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  8 18:10 EVNT.49474408._000004.pool.root.1 -> /data/./ATLAS.root_0
2026-04-08 21:50:28 (15172): Guest Log: -rw-r--r--. 1 atlas atlas      2605 Apr  8 18:10 pandaJob.out
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas    997213 Apr  8 18:11 agis_schedconf.cvmfs.json
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr  8 18:11 agis_ddmendpoints.agis.ALL.json
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas       424 Apr  8 18:11 workernode_map.json
2026-04-08 21:50:28 (15172): Guest Log: drwx------. 5 atlas atlas      4096 Apr  8 18:11 pilot3
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas 172136183 Apr  8 20:49 HITS.49499601._000224.pool.root.1
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas      1031 Apr  8 20:49 memory_monitor_summary.json
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas    324466 Apr  8 20:49 log.49499601._000224.job.log.tgz.1
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas      6374 Apr  8 20:49 heartbeat_new.json
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas      6265 Apr  8 20:49 heartbeat.json
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas       814 Apr  8 20:50 pilotlog.txt
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas        95 Apr  8 20:50 pilot_heartbeat.json
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas    853717 Apr  8 20:50 log.49499601._000224.job.log.1
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas       357 Apr  8 20:50 output.list
2026-04-08 21:50:28 (15172): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr  8 20:50 runtime_log
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas   1198080 Apr  8 20:50 result.tar.gz
2026-04-08 21:50:28 (15172): Guest Log: -rw-r--r--. 1 atlas atlas      8382 Apr  8 20:50 runtime_log.err
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas       659 Apr  8 20:50 9610133155ca.diag
2026-04-08 21:50:28 (15172): Guest Log: Looking for outputfile HITS.49499601._000224.pool.root.1
2026-04-08 21:50:28 (15172): Guest Log: HITS file was successfully produced
2026-04-08 21:50:28 (15172): Guest Log: -rw-------. 1 atlas atlas 172136183 Apr  8 20:49 /home/atlas/RunAtlas/HITS.49499601._000224.pool.root.1
2026-04-08 21:50:30 (15172): Guest Log: Successfully finished the ATLAS job!
2026-04-08 21:50:30 (15172): Guest Log: Copying the results back to the shared directory!
2026-04-08 21:50:30 (15172): Guest Log:  *** Contents of shared directory: ***
2026-04-08 21:50:30 (15172): Guest Log: total 424756
2026-04-08 21:50:30 (15172): Guest Log: -rwxrwxrwx. 1 root root 260922364 Apr  8 18:09 ATLAS.root_0
2026-04-08 21:50:30 (15172): Guest Log: -rwxrwxrwx. 1 root root 172136183 Apr  8 20:50 HITS.pool.root.1
2026-04-08 21:50:30 (15172): Guest Log: -rwxrwxrwx. 1 root root      8495 Apr  8 18:09 init_data.xml
2026-04-08 21:50:30 (15172): Guest Log: -rwxrwxrwx. 1 root root    656947 Apr  8 18:08 input.tar.gz
2026-04-08 21:50:30 (15172): Guest Log: -rwxrwxrwx. 1 root root   1198080 Apr  8 20:50 result.tar.gz
2026-04-08 21:50:30 (15172): Guest Log: -rwxrwxrwx. 1 root root     15665 Apr  8 18:08 start_atlas.sh
2026-04-08 21:50:30 (15172): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-08 21:50:30 (15172): VM Completion File Detected.
2026-04-08 21:50:30 (15172): Powering off VM.
2026-04-08 21:50:31 (15172): Successfully stopped VM.
2026-04-08 21:50:31 (15172): Deregistering VM. (boinc_fb4ff5bcd18b7af2, slot#1)
2026-04-08 21:50:31 (15172): Removing network bandwidth throttle group from VM.
2026-04-08 21:50:32 (15172): Removing VM from VirtualBox.
2026-04-08 21:50:37 (15172): called boinc_finish(0)

</stderr_txt>
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