Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:34:24 (454258): wrapper (7.7.26015): starting
07:34:24 (454258): wrapper: running run_atlas (--nthreads 12)
[2026-04-09 07:34:24] Arguments: --nthreads 12
[2026-04-09 07:34:24] Threads: 12
[2026-04-09 07:34:24] Checking for CVMFS
[2026-04-09 07:34:24] No cvmfs_config command found, will try listing directly
[2026-04-09 07:34:24] CVMFS is ok
[2026-04-09 07:34:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-09 07:34:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-09 07:34:24] Further information can be found at the LHC@home message board.
[2026-04-09 07:34:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-09 07:34:24] Checking for apptainer binary...
[2026-04-09 07:34:24] which: no apptainer in ((null))
[2026-04-09 07:34:24] apptainer is not installed, using version from CVMFS
[2026-04-09 07:34:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-09 07:34:24] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot144/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-04-09 07:34:24] apptainer works
[2026-04-09 07:34:24] Set ATHENA_PROC_NUMBER=12
[2026-04-09 07:34:24] Set ATHENA_CORE_NUMBER=12
[2026-04-09 07:34:24] Starting ATLAS job with PandaID=7074591593
[2026-04-09 07:34:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot144/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-09 08:01:45]  *** The last 200 lines of the pilot log: ***
[2026-04-09 08:01:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-09 08:01:45]  is_altstaged=None
[2026-04-09 08:01:45]  is_tar=False
[2026-04-09 08:01:45]  lfn=log.49263208._021942.job.log.tgz.1
[2026-04-09 08:01:45]  mtime=0
[2026-04-09 08:01:45]  protocol_id=None
[2026-04-09 08:01:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-09 08:01:45]  replicas=None
[2026-04-09 08:01:45]  scope=mc23_13p6TeV
[2026-04-09 08:01:45]  status=None
[2026-04-09 08:01:45]  status_code=0
[2026-04-09 08:01:45]  storage_token=
[2026-04-09 08:01:45]  surl=/var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7074591593/log.49263208._021942.job.log.tgz.1
[2026-04-09 08:01:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/4f/log.49263208._021942.job.log.tgz.1
[2026-04-09 08:01:45]  workdir=None
[2026-04-09 08:01:45] ]
[2026-04-09 08:01:45] 2026-04-09 06:00:46,858 | INFO     | transferring file log.49263208._021942.job.log.tgz.1 from /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7074591593/log.49263208._021942.job.log.tgz.1 to /var/lib/
[2026-04-09 08:01:45] 2026-04-09 06:00:46,858 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7074591593/log.49263208._021942.job.log.tgz.1 /var/lib/boinc/var/slot144/slots/1/
[2026-04-09 08:01:45] 2026-04-09 06:00:46,873 | INFO     | adding to output.list: log.49263208._021942.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/4f/log.49263208._021942.job.log.tg
[2026-04-09 08:01:45] 2026-04-09 06:00:46,874 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-09 08:01:45] 2026-04-09 06:00:46,874 | INFO     | summary of transferred files:
[2026-04-09 08:01:45] 2026-04-09 06:00:46,874 | INFO     |  -- lfn=log.49263208._021942.job.log.tgz.1, status_code=0, status=transferred
[2026-04-09 08:01:45] 2026-04-09 06:00:46,874 | INFO     | stage-out finished correctly
[2026-04-09 08:01:45] 2026-04-09 06:00:49,687 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-09 08:01:45] 2026-04-09 06:00:52,096 | WARNING  | process 465075 can no longer be monitored (due to stat problems) - aborting
[2026-04-09 08:01:45] 2026-04-09 06:00:52,097 | INFO     | using path: /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7074591593/memory_monitor_summary.json (trf name=prmon)
[2026-04-09 08:01:45] 2026-04-09 06:00:52,296 | INFO     | job 7074591593 has state=finished
[2026-04-09 08:01:45] 2026-04-09 06:00:52,297 | INFO     | preparing for final server update for job 7074591593 in state='finished'
[2026-04-09 08:01:45] 2026-04-09 06:00:52,297 | INFO     | reading metadata from: /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7074591593/jobReport.json
[2026-04-09 08:01:45] 2026-04-09 06:00:52,299 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot144/slots/1/workernode_map.json
[2026-04-09 08:01:45] 2026-04-09 06:00:52,300 | INFO     | this job has now completed (state=finished)
[2026-04-09 08:01:45] 2026-04-09 06:00:52,300 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-09 08:01:45] 2026-04-09 06:00:52,300 | INFO     | log transfer has been attempted: DONE
[2026-04-09 08:01:45] 2026-04-09 06:00:52,300 | INFO     | job 7074591593 has finished - writing final server update
[2026-04-09 08:01:45] 2026-04-09 06:00:52,300 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4031798/.job.ad'
[2026-04-09 08:01:45] 2026-04-09 06:00:52,300 | INFO     | total number of processed events: 400 (read)
[2026-04-09 08:01:45] 2026-04-09 06:00:52,335 | INFO     | using path: /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7074591593/memory_monitor_summary.json (trf name=prmon)
[2026-04-09 08:01:45] 2026-04-09 06:00:52,336 | INFO     | extracted standard info from prmon json
[2026-04-09 08:01:45] 2026-04-09 06:00:52,336 | INFO     | extracted standard memory fields from prmon json
[2026-04-09 08:01:45] 2026-04-09 06:00:52,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-09 08:01:45] 2026-04-09 06:00:52,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-09 08:01:45] 2026-04-09 06:00:52,337 | INFO     | fitting pss+swap vs Time
[2026-04-09 08:01:45] 2026-04-09 06:00:52,338 | INFO     | sum of square deviations: 2120970.0
[2026-04-09 08:01:45] 2026-04-09 06:00:52,338 | INFO     | sum of deviations: 60103360.99999999
[2026-04-09 08:01:45] 2026-04-09 06:00:52,338 | INFO     | mean x (centered): 0.0
[2026-04-09 08:01:45] 2026-04-09 06:00:52,338 | INFO     | mean y: 2712509.052631579
[2026-04-09 08:01:45] 2026-04-09 06:00:52,338 | INFO     | intersect: 2712509.052631579
[2026-04-09 08:01:45] 2026-04-09 06:00:52,338 | INFO     | chi2: 5.875725920117485e-05
[2026-04-09 08:01:45] 2026-04-09 06:00:52,338 | INFO     | current memory leak: 28.34 B/s (using 19 data points, chi2=0.00)
[2026-04-09 08:01:45] 2026-04-09 06:00:52,339 | INFO     | could have reported an average CPU frequency of 3639 MHz (4 samples)
[2026-04-09 08:01:45] 2026-04-09 06:00:52,339 | INFO     | ..............................
[2026-04-09 08:01:45] 2026-04-09 06:00:52,339 | INFO     | . Timing measurements:
[2026-04-09 08:01:45] 2026-04-09 06:00:52,339 | INFO     | . get job = 0 s
[2026-04-09 08:01:45] 2026-04-09 06:00:52,339 | INFO     | . initial setup = 4 s
[2026-04-09 08:01:45] 2026-04-09 06:00:52,339 | INFO     | . payload setup = 6 s
[2026-04-09 08:01:45] 2026-04-09 06:00:52,339 | INFO     | . stage-in = 0 s
[2026-04-09 08:01:45] 2026-04-09 06:00:52,339 | INFO     | . payload execution = 1549 s
[2026-04-09 08:01:45] 2026-04-09 06:00:52,339 | INFO     | . stage-out = 0 s
[2026-04-09 08:01:45] 2026-04-09 06:00:52,339 | INFO     | . log creation = 0 s
[2026-04-09 08:01:45] 2026-04-09 06:00:52,339 | INFO     | ..............................
[2026-04-09 08:01:45] 2026-04-09 06:00:52,386 | INFO     | 
[2026-04-09 08:01:45] 2026-04-09 06:00:52,386 | INFO     | job summary report
[2026-04-09 08:01:45] 2026-04-09 06:00:52,386 | INFO     | --------------------------------------------------
[2026-04-09 08:01:45] 2026-04-09 06:00:52,386 | INFO     | PanDA job id: 7074591593
[2026-04-09 08:01:45] 2026-04-09 06:00:52,386 | INFO     | task id: 49263208
[2026-04-09 08:01:45] 2026-04-09 06:00:52,386 | INFO     | errors: (none)
[2026-04-09 08:01:45] 2026-04-09 06:00:52,386 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-09 08:01:45] 2026-04-09 06:00:52,386 | INFO     | pilot state: finished 
[2026-04-09 08:01:45] 2026-04-09 06:00:52,386 | INFO     | transexitcode: 0
[2026-04-09 08:01:45] 2026-04-09 06:00:52,386 | INFO     | exeerrorcode: 0
[2026-04-09 08:01:45] 2026-04-09 06:00:52,386 | INFO     | exeerrordiag: 
[2026-04-09 08:01:45] 2026-04-09 06:00:52,386 | INFO     | exitcode: 0
[2026-04-09 08:01:45] 2026-04-09 06:00:52,386 | INFO     | exitmsg: OK
[2026-04-09 08:01:45] 2026-04-09 06:00:52,387 | INFO     | cpuconsumptiontime: 16392 s
[2026-04-09 08:01:45] 2026-04-09 06:00:52,387 | INFO     | nevents: 400
[2026-04-09 08:01:45] 2026-04-09 06:00:52,387 | INFO     | neventsw: 0
[2026-04-09 08:01:45] 2026-04-09 06:00:52,387 | INFO     | pid: 465075
[2026-04-09 08:01:45] 2026-04-09 06:00:52,387 | INFO     | pgrp: 465075
[2026-04-09 08:01:45] 2026-04-09 06:00:52,387 | INFO     | corecount: 12
[2026-04-09 08:01:45] 2026-04-09 06:00:52,387 | INFO     | event service: False
[2026-04-09 08:01:45] 2026-04-09 06:00:52,387 | INFO     | sizes: {0: 2281530, 11: 2281530, 1559: 2306337, 1560: 2315359, 1562: 2315415, 1565: 2315609}
[2026-04-09 08:01:45] 2026-04-09 06:00:52,387 | INFO     | --------------------------------------------------
[2026-04-09 08:01:45] 2026-04-09 06:00:52,387 | INFO     | 
[2026-04-09 08:01:45] 2026-04-09 06:00:52,387 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot144/slots/1
[2026-04-09 08:01:45] 2026-04-09 06:00:52,403 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,403 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,403 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,403 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | job 7074591593 has completed (purged errors)
[2026-04-09 08:01:45] 2026-04-09 06:00:52,404 | INFO     | overall cleanup function is called
[2026-04-09 08:01:45] 2026-04-09 06:00:53,042 | INFO     | PID=458797 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-09 08:01:45] 2026-04-09 06:00:53,043 | INFO     | .. there are 13 such processes running
[2026-04-09 08:01:45] 2026-04-09 06:00:53,058 | INFO     | number of running child processes to parent process 465075: 1
[2026-04-09 08:01:45] 2026-04-09 06:00:53,058 | INFO     | maximum number of monitored processes: 6
[2026-04-09 08:01:45] 2026-04-09 06:00:53,058 | INFO     | aborting job monitoring since job object (job id=7074591593) has expired
[2026-04-09 08:01:45] 2026-04-09 06:00:53,414 | INFO     | --- collectZombieJob: --- 10, [465075]
[2026-04-09 08:01:45] 2026-04-09 06:00:53,414 | INFO     | zombie collector waiting for pid 465075
[2026-04-09 08:01:45] 2026-04-09 06:00:53,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-09 08:01:45] 2026-04-09 06:00:53,414 | INFO     | collected zombie processes
[2026-04-09 08:01:45] 2026-04-09 06:00:53,414 | INFO     | will attempt to kill all subprocesses of pid=465075
[2026-04-09 08:01:45] 2026-04-09 06:00:53,736 | INFO     | process IDs to be killed: [465075] (in reverse order)
[2026-04-09 08:01:45] 2026-04-09 06:00:53,881 | WARNING  | found no corresponding commands to process id(s)
[2026-04-09 08:01:45] 2026-04-09 06:00:53,881 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-09 08:01:45] 2026-04-09 06:00:53,903 | INFO     | did not find any defunct processes belonging to 465075
[2026-04-09 08:01:45] 2026-04-09 06:00:53,924 | INFO     | did not find any defunct processes belonging to 465075
[2026-04-09 08:01:45] 2026-04-09 06:00:53,924 | INFO     | Ready for new job
[2026-04-09 08:01:45] 2026-04-09 06:00:53,925 | INFO     | **************************************
[2026-04-09 08:01:45] 2026-04-09 06:00:53,925 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-09 08:01:45] 2026-04-09 06:00:53,925 | INFO     | **************************************
[2026-04-09 08:01:45] 2026-04-09 06:00:53,925 | INFO     | 
[2026-04-09 08:01:45] 2026-04-09 06:00:53,930 | INFO     | architecture information:
[2026-04-09 08:01:45] 2026-04-09 06:00:53,930 | INFO     | executing command: cat /etc/os-release
[2026-04-09 08:01:45] 2026-04-09 06:00:53,943 | INFO     | cat /etc/os-release:
[2026-04-09 08:01:45] NAME="CentOS Linux"
[2026-04-09 08:01:45] VERSION="7 (Core)"
[2026-04-09 08:01:45] ID="centos"
[2026-04-09 08:01:45] ID_LIKE="rhel fedora"
[2026-04-09 08:01:45] VERSION_ID="7"
[2026-04-09 08:01:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-09 08:01:45] ANSI_COLOR="0;31"
[2026-04-09 08:01:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-09 08:01:45] HOME_URL="https://www.centos.org/"
[2026-04-09 08:01:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-09 08:01:45] 
[2026-04-09 08:01:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-09 08:01:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-09 08:01:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-09 08:01:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-09 08:01:45] 
[2026-04-09 08:01:45] 2026-04-09 06:00:53,943 | INFO     | **************************************
[2026-04-09 08:01:45] 2026-04-09 06:00:54,446 | INFO     | executing command: df -mP /var/lib/boinc/var/slot144/slots/1
[2026-04-09 08:01:45] 2026-04-09 06:00:54,459 | INFO     | sufficient remaining disk space (259132489728 B)
[2026-04-09 08:01:45] 2026-04-09 06:00:54,460 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-09 08:01:45] 2026-04-09 06:00:54,460 | INFO     | current server update state: UPDATING_FINAL
[2026-04-09 08:01:45] 2026-04-09 06:00:54,460 | INFO     | update_server=False
[2026-04-09 08:01:45] 2026-04-09 06:00:54,460 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-09 08:01:45] 2026-04-09 06:00:54,460 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-09 08:01:45] 2026-04-09 06:00:54,461 | INFO     | aborting loop
[2026-04-09 08:01:45] 2026-04-09 06:00:54,915 | INFO     | all job control threads have been joined
[2026-04-09 08:01:45] 2026-04-09 06:00:54,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-09 08:01:45] 2026-04-09 06:00:55,168 | INFO     | all data control threads have been joined
[2026-04-09 08:01:45] 2026-04-09 06:00:55,459 | INFO     | all payload control threads have been joined
[2026-04-09 08:01:45] 2026-04-09 06:00:55,466 | INFO     | [job] retrieve thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:00:55,466 | INFO     | [job] job monitor thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:00:55,657 | INFO     | [payload] failed_post thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:00:55,739 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-09 08:01:45] 2026-04-09 06:00:55,920 | INFO     | [job] control thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:00:56,173 | INFO     | [data] control thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:00:56,390 | INFO     | [payload] execute_payloads thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:00:56,465 | INFO     | [payload] control thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:00:56,479 | INFO     | [job] validate thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:00:56,646 | INFO     | [payload] validate_pre thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:00:56,729 | INFO     | [job] create_data_payload thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:00:56,882 | INFO     | [data] copytool_in thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:00:56,937 | INFO     | [data] copytool_out thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:00:57,032 | INFO     | [payload] validate_post thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:00:57,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-09 08:01:45] 2026-04-09 06:00:58,402 | INFO     | [job] queue monitor thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:00:59,745 | INFO     | [data] queue_monitor thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:01:05,452 | INFO     | job.realtimelogging is not enabled
[2026-04-09 08:01:45] 2026-04-09 06:01:06,457 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-09 08:01:45] 2026-04-09 06:01:25,567 | INFO     | PID=458797 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-09 08:01:45] 2026-04-09 06:01:25,567 | INFO     | .. there are 13 such processes running
[2026-04-09 08:01:45] 2026-04-09 06:01:25,568 | INFO     | found 0 job(s) in 20 queues
[2026-04-09 08:01:45] 2026-04-09 06:01:25,568 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-09 08:01:45] 2026-04-09 06:01:25,568 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-09 08:01:45] 2026-04-09 06:01:38,076 | INFO     | [monitor] cgroup control has ended
[2026-04-09 08:01:45] 2026-04-09 06:01:40,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23165306881856)>', '<ExcThread(monitor, started 23165071017728)>']
[2026-04-09 08:01:45] 2026-04-09 06:01:40,642 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-09 08:01:45] 2026-04-09 06:01:40,642 | INFO     | [monitor] control thread has ended
[2026-04-09 08:01:45] 2026-04-09 06:01:45,103 | INFO     | all workflow threads have been joined
[2026-04-09 08:01:45] 2026-04-09 06:01:45,103 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-09 08:01:45] 2026-04-09 06:01:45,103 | INFO     | traces error code: 0
[2026-04-09 08:01:45] 2026-04-09 06:01:45,104 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-09 08:01:45] 2026-04-09 06:01:45,239 [wrapper] ==== pilot stdout END ====
[2026-04-09 08:01:45] 2026-04-09 06:01:45,241 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-09 08:01:45] 2026-04-09 06:01:45,243 [wrapper] pilotpid: 458797
[2026-04-09 08:01:45] 2026-04-09 06:01:45,245 [wrapper] Pilot exit status: 0
[2026-04-09 08:01:45] 2026-04-09 06:01:45,252 [wrapper] pandaids: 7074591593
[2026-04-09 08:01:45] 2026-04-09 06:01:45,354 [wrapper] cleanup supervisor_pilot  546525 458798
[2026-04-09 08:01:45] 2026-04-09 06:01:45,356 [wrapper] Test setup, not cleaning
[2026-04-09 08:01:45] 2026-04-09 06:01:45,359 [wrapper] apfmon messages muted
[2026-04-09 08:01:45] 2026-04-09 06:01:45,361 [wrapper] ==== wrapper stdout END ====
[2026-04-09 08:01:45] 2026-04-09 06:01:45,363 [wrapper] ==== wrapper stderr END ====
[2026-04-09 08:01:45]  *** Error codes and diagnostics ***
[2026-04-09 08:01:45]     "exeErrorCode": 0,
[2026-04-09 08:01:45]     "pilotErrorCode": 0,
[2026-04-09 08:01:45]  *** Listing of results directory ***
[2026-04-09 08:01:45] total 417428
[2026-04-09 08:01:45] -rwx------. 1 boinc boinc     36322 Apr  6 23:58 runpilot2-wrapper.sh
[2026-04-09 08:01:45] -rw-r--r--. 1 boinc boinc    644190 Apr  8 19:00 pilot3.tar.gz
[2026-04-09 08:01:45] -rw-r--r--. 1 boinc boinc      5094 Apr  8 19:02 queuedata.json
[2026-04-09 08:01:45] -rw-r--r--. 1 boinc boinc       100 Apr  9 07:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-09 08:01:45] -rwxr-xr-x. 1 boinc boinc      7986 Apr  9 07:34 run_atlas
[2026-04-09 08:01:45] -rw-r--r--. 1 boinc boinc       105 Apr  9 07:34 job.xml
[2026-04-09 08:01:45] -rw-r--r--. 1 boinc boinc      6628 Apr  9 07:34 init_data.xml
[2026-04-09 08:01:45] -rw-r--r--. 2 boinc boinc 226463016 Apr  9 07:34 EVNT.49263206._000861.pool.root.1
[2026-04-09 08:01:45] -rw-r--r--. 2 boinc boinc     15665 Apr  9 07:34 start_atlas.sh
[2026-04-09 08:01:45] drwxrwx--x. 2 boinc boinc      4096 Apr  9 07:34 shared
[2026-04-09 08:01:45] -rw-r--r--. 2 boinc boinc    656931 Apr  9 07:34 input.tar.gz
[2026-04-09 08:01:45] -rw-r--r--. 1 boinc boinc         0 Apr  9 07:34 boinc_lockfile
[2026-04-09 08:01:45] -rw-r--r--. 1 boinc boinc      2575 Apr  9 07:34 pandaJob.out
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc    997887 Apr  9 07:34 agis_schedconf.cvmfs.json
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc   1511579 Apr  9 07:34 agis_ddmendpoints.agis.ALL.json
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc       445 Apr  9 07:34 workernode_map.json
[2026-04-09 08:01:45] drwx------. 5 boinc boinc      4096 Apr  9 07:34 pilot3
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc 195894491 Apr  9 08:00 HITS.49263208._021942.pool.root.1
[2026-04-09 08:01:45] -rw-r--r--. 1 boinc boinc       487 Apr  9 08:00 boinc_task_state.xml
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc      1025 Apr  9 08:00 memory_monitor_summary.json
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc    322727 Apr  9 08:00 log.49263208._021942.job.log.tgz.1
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc      6375 Apr  9 08:00 heartbeat_new.json
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc      6266 Apr  9 08:00 heartbeat.json
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc        95 Apr  9 08:01 pilot_heartbeat.json
[2026-04-09 08:01:45] -rw-r--r--. 1 boinc boinc        27 Apr  9 08:01 wrapper_checkpoint.txt
[2026-04-09 08:01:45] -rw-r--r--. 1 boinc boinc      8192 Apr  9 08:01 boinc_mmap_file
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc      4901 Apr  9 08:01 pilotlog.txt
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc    195153 Apr  9 08:01 log.49263208._021942.job.log.1
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc       357 Apr  9 08:01 output.list
[2026-04-09 08:01:45] -rw-r--r--. 1 boinc boinc       410 Apr  9 08:01 runtime_log
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc    532480 Apr  9 08:01 result.tar.gz
[2026-04-09 08:01:45] -rw-r--r--. 1 boinc boinc      8845 Apr  9 08:01 runtime_log.err
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc       656 Apr  9 08:01 2c90e1eec6fd.diag
[2026-04-09 08:01:45] -rw-r--r--. 1 boinc boinc     21338 Apr  9 08:01 stderr.txt
[2026-04-09 08:01:45] HITS file was successfully produced:
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc 195894491 Apr  9 08:00 shared/HITS.pool.root.1
[2026-04-09 08:01:45]  *** Contents of shared directory: ***
[2026-04-09 08:01:45] total 413648
[2026-04-09 08:01:45] -rw-r--r--. 2 boinc boinc 226463016 Apr  9 07:34 ATLAS.root_0
[2026-04-09 08:01:45] -rw-r--r--. 2 boinc boinc     15665 Apr  9 07:34 start_atlas.sh
[2026-04-09 08:01:45] -rw-r--r--. 2 boinc boinc    656931 Apr  9 07:34 input.tar.gz
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc 195894491 Apr  9 08:00 HITS.pool.root.1
[2026-04-09 08:01:45] -rw-------. 1 boinc boinc    532480 Apr  9 08:01 result.tar.gz
08:01:47 (454258): run_atlas exited; CPU time 16438.809527
08:01:47 (454258): called boinc_finish(0)

</stderr_txt>
]]>

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