Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:21:41 (2056441): wrapper (7.7.26015): starting
12:21:41 (2056441): wrapper: running run_atlas (--nthreads 12)
[2026-04-08 12:21:41] Arguments: --nthreads 12
[2026-04-08 12:21:41] Threads: 12
[2026-04-08 12:21:41] Checking for CVMFS
[2026-04-08 12:21:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-08 12:21:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-08 12:21:42] Running cvmfs_config stat atlas.cern.ch
[2026-04-08 12:21:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-08 12:21:43] 2.13.3.0 9714 221758 199988 158226 1 66 17438773 21042176 23788 16776704 0 916054450 99.438 1267487435 32662 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-08 12:21:43] CVMFS is ok
[2026-04-08 12:21:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-08 12:21:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-08 12:21:43] Further information can be found at the LHC@home message board.
[2026-04-08 12:21:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-08 12:21:43] Checking for apptainer binary...
[2026-04-08 12:21:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-08 12:21:43] Running /usr/bin/apptainer --version
[2026-04-08 12:21:43] apptainer version 1.4.5-2.el9
[2026-04-08 12:21:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-08 12:21:44] c-6-1.aglt2.org
[2026-04-08 12:21:44] apptainer works
[2026-04-08 12:21:44] Set ATHENA_PROC_NUMBER=12
[2026-04-08 12:21:44] Set ATHENA_CORE_NUMBER=12
[2026-04-08 12:21:44] Starting ATLAS job with PandaID=7074759208
[2026-04-08 12:21:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-08 20:35:03]  *** The last 200 lines of the pilot log: ***
[2026-04-08 20:35:03] 2026-04-09 00:34:09,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-08 20:35:03] 2026-04-09 00:34:09,573 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-08 20:35:03] 2026-04-09 00:34:11,742 | INFO     | monitor loop #1571: job 0:7074759208 is in state 'finished'
[2026-04-08 20:35:03] 2026-04-09 00:34:11,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-08 20:35:03] 2026-04-09 00:34:12,905 | INFO     | job 7074759208 has state=finished
[2026-04-08 20:35:03] 2026-04-09 00:34:12,906 | INFO     | preparing for final server update for job 7074759208 in state='finished'
[2026-04-08 20:35:03] 2026-04-09 00:34:12,906 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7074759208/jobReport.json
[2026-04-08 20:35:03] 2026-04-09 00:34:12,909 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-08 20:35:03] 2026-04-09 00:34:12,939 | INFO     | this job has now completed (state=finished)
[2026-04-08 20:35:03] 2026-04-09 00:34:12,939 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-08 20:35:03] 2026-04-09 00:34:12,939 | INFO     | log transfer has been attempted: DONE
[2026-04-08 20:35:03] 2026-04-09 00:34:12,939 | INFO     | job 7074759208 has finished - writing final server update
[2026-04-08 20:35:03] 2026-04-09 00:34:12,939 | INFO     | total number of processed events: 400 (read)
[2026-04-08 20:35:03] 2026-04-09 00:34:13,070 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7074759208/memory_monitor_summary.json (trf name=prmon)
[2026-04-08 20:35:03] 2026-04-09 00:34:13,071 | INFO     | extracted standard info from prmon json
[2026-04-08 20:35:03] 2026-04-09 00:34:13,072 | INFO     | extracted standard memory fields from prmon json
[2026-04-08 20:35:03] 2026-04-09 00:34:13,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-08 20:35:03] 2026-04-09 00:34:13,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-08 20:35:03] 2026-04-09 00:34:13,225 | INFO     | fitting pss+swap vs Time
[2026-04-08 20:35:03] 2026-04-09 00:34:13,277 | INFO     | sum of square deviations: 34723372998.12647
[2026-04-08 20:35:03] 2026-04-09 00:34:13,309 | INFO     | sum of deviations: -38145406261.93769
[2026-04-08 20:35:03] 2026-04-09 00:34:13,310 | INFO     | mean x (centered): 0.0
[2026-04-08 20:35:03] 2026-04-09 00:34:13,310 | INFO     | mean y: 2741004.713692946
[2026-04-08 20:35:03] 2026-04-09 00:34:13,310 | INFO     | intersect: 2741004.713692946
[2026-04-08 20:35:03] 2026-04-09 00:34:13,325 | INFO     | chi2: 4.330364665354057
[2026-04-08 20:35:03] 2026-04-09 00:34:13,326 | INFO     | sum of square deviations: 33654053823.023117
[2026-04-08 20:35:03] 2026-04-09 00:34:13,405 | INFO     | sum of deviations: -3970347762.4465194
[2026-04-08 20:35:03] 2026-04-09 00:34:13,405 | INFO     | mean x (centered): 0.0
[2026-04-08 20:35:03] 2026-04-09 00:34:13,405 | INFO     | mean y: 2745838.4088050313
[2026-04-08 20:35:03] 2026-04-09 00:34:13,437 | INFO     | intersect: 2745838.4088050313
[2026-04-08 20:35:03] 2026-04-09 00:34:13,439 | INFO     | chi2: 3.6224100658317484
[2026-04-08 20:35:03] 2026-04-09 00:34:13,439 | INFO     | current chi2=3.6224100658317484 (change=16.34861389818829 %)
[2026-04-08 20:35:03] 2026-04-09 00:34:13,439 | INFO     | right removable region: 476
[2026-04-08 20:35:03] 2026-04-09 00:34:13,440 | INFO     | sum of square deviations: 33653842763.0231
[2026-04-08 20:35:03] 2026-04-09 00:34:13,477 | INFO     | sum of deviations: -182585605315.86377
[2026-04-08 20:35:03] 2026-04-09 00:34:13,478 | INFO     | mean x (centered): 0.0
[2026-04-08 20:35:03] 2026-04-09 00:34:13,478 | INFO     | mean y: 2761561.649895178
[2026-04-08 20:35:03] 2026-04-09 00:34:13,478 | INFO     | intersect: 2761561.649895178
[2026-04-08 20:35:03] 2026-04-09 00:34:13,487 | INFO     | chi2: 1.3506326150211108
[2026-04-08 20:35:03] 2026-04-09 00:34:13,496 | INFO     | current chi2=1.3506326150211108 (change=68.81018760782169 %)
[2026-04-08 20:35:03] 2026-04-09 00:34:13,502 | INFO     | sum of square deviations: 32606498990.364227
[2026-04-08 20:35:03] 2026-04-09 00:34:13,526 | INFO     | sum of deviations: -207922716708.60184
[2026-04-08 20:35:03] 2026-04-09 00:34:13,526 | INFO     | mean x (centered): 0.0
[2026-04-08 20:35:03] 2026-04-09 00:34:13,526 | INFO     | mean y: 2765240.4872881356
[2026-04-08 20:35:03] 2026-04-09 00:34:13,526 | INFO     | intersect: 2765240.4872881356
[2026-04-08 20:35:03] 2026-04-09 00:34:13,527 | INFO     | chi2: 1.21492394863641
[2026-04-08 20:35:03] 2026-04-09 00:34:13,527 | INFO     | current chi2=1.21492394863641 (change=10.047785376675472 %)
[2026-04-08 20:35:03] 2026-04-09 00:34:13,527 | INFO     | left removable region: 10
[2026-04-08 20:35:03] 2026-04-09 00:34:13,528 | INFO     | sum of square deviations: 31378898417.598747
[2026-04-08 20:35:03] 2026-04-09 00:34:13,666 | INFO     | sum of deviations: -172202284169.24655
[2026-04-08 20:35:03] 2026-04-09 00:34:13,666 | INFO     | mean x (centered): 0.0
[2026-04-08 20:35:03] 2026-04-09 00:34:13,666 | INFO     | mean y: 2770513.143776824
[2026-04-08 20:35:03] 2026-04-09 00:34:13,666 | INFO     | intersect: 2770513.143776824
[2026-04-08 20:35:03] 2026-04-09 00:34:13,667 | INFO     | chi2: 0.48657699636059343
[2026-04-08 20:35:03] 2026-04-09 00:34:13,668 | INFO     | current memory leak: -5.49 B/s (using 466 data points, chi2=0.49)
[2026-04-08 20:35:03] 2026-04-09 00:34:13,668 | INFO     | could have reported an average CPU frequency of 2599 MHz (20 samples)
[2026-04-08 20:35:03] 2026-04-09 00:34:13,669 | INFO     | ..............................
[2026-04-08 20:35:03] 2026-04-09 00:34:13,669 | INFO     | . Timing measurements:
[2026-04-08 20:35:03] 2026-04-09 00:34:13,670 | INFO     | . get job = 0 s
[2026-04-08 20:35:03] 2026-04-09 00:34:13,670 | INFO     | . initial setup = 29 s
[2026-04-08 20:35:03] 2026-04-09 00:34:13,670 | INFO     | . payload setup = 66 s
[2026-04-08 20:35:03] 2026-04-09 00:34:13,670 | INFO     | . stage-in = 0 s
[2026-04-08 20:35:03] 2026-04-09 00:34:13,670 | INFO     | . payload execution = 29389 s
[2026-04-08 20:35:03] 2026-04-09 00:34:13,670 | INFO     | . stage-out = 6 s
[2026-04-08 20:35:03] 2026-04-09 00:34:13,671 | INFO     | . log creation = 1 s
[2026-04-08 20:35:03] 2026-04-09 00:34:13,671 | INFO     | ..............................
[2026-04-08 20:35:03] 2026-04-09 00:34:14,090 | INFO     | 
[2026-04-08 20:35:03] 2026-04-09 00:34:14,091 | INFO     | job summary report
[2026-04-08 20:35:03] 2026-04-09 00:34:14,091 | INFO     | --------------------------------------------------
[2026-04-08 20:35:03] 2026-04-09 00:34:14,091 | INFO     | PanDA job id: 7074759208
[2026-04-08 20:35:03] 2026-04-09 00:34:14,091 | INFO     | task id: 49499447
[2026-04-08 20:35:03] 2026-04-09 00:34:14,091 | INFO     | errors: (none)
[2026-04-08 20:35:03] 2026-04-09 00:34:14,091 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-08 20:35:03] 2026-04-09 00:34:14,092 | INFO     | pilot state: finished 
[2026-04-08 20:35:03] 2026-04-09 00:34:14,092 | INFO     | transexitcode: 0
[2026-04-08 20:35:03] 2026-04-09 00:34:14,092 | INFO     | exeerrorcode: 0
[2026-04-08 20:35:03] 2026-04-09 00:34:14,092 | INFO     | exeerrordiag: 
[2026-04-08 20:35:03] 2026-04-09 00:34:14,092 | INFO     | exitcode: 0
[2026-04-08 20:35:03] 2026-04-09 00:34:14,092 | INFO     | exitmsg: OK
[2026-04-08 20:35:03] 2026-04-09 00:34:14,092 | INFO     | cpuconsumptiontime: 54096 s
[2026-04-08 20:35:03] 2026-04-09 00:34:14,092 | INFO     | nevents: 400
[2026-04-08 20:35:03] 2026-04-09 00:34:14,092 | INFO     | neventsw: 0
[2026-04-08 20:35:03] 2026-04-09 00:34:14,093 | INFO     | pid: 2068343
[2026-04-08 20:35:03] 2026-04-09 00:34:14,093 | INFO     | pgrp: 2068343
[2026-04-08 20:35:03] 2026-04-09 00:34:14,093 | INFO     | corecount: 12
[2026-04-08 20:35:03] 2026-04-09 00:34:14,093 | INFO     | event service: False
[2026-04-08 20:35:03] 2026-04-09 00:34:14,093 | INFO     | sizes: {0: 2279088, 1: 2279773, 2: 2281602, 29458: 2318752, 29459: 2318751, 29466: 2327805, 29467: 2327989, 29471: 2328183}
[2026-04-08 20:35:03] 2026-04-09 00:34:14,093 | INFO     | --------------------------------------------------
[2026-04-08 20:35:03] 2026-04-09 00:34:14,093 | INFO     | 
[2026-04-08 20:35:03] 2026-04-09 00:34:14,093 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-08 20:35:03] 2026-04-09 00:34:14,332 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,332 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,332 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,333 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,333 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,333 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,333 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,333 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,333 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,333 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,334 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-08 20:35:03] 2026-04-09 00:34:14,334 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,364 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-08 20:35:03] 2026-04-09 00:34:14,365 | INFO     | job 7074759208 has completed (purged errors)
[2026-04-08 20:35:03] 2026-04-09 00:34:14,365 | INFO     | overall cleanup function is called
[2026-04-08 20:35:03] 2026-04-09 00:34:15,384 | INFO     | --- collectZombieJob: --- 10, [2068343]
[2026-04-08 20:35:03] 2026-04-09 00:34:15,385 | INFO     | zombie collector waiting for pid 2068343
[2026-04-08 20:35:03] 2026-04-09 00:34:15,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-08 20:35:03] 2026-04-09 00:34:15,385 | INFO     | collected zombie processes
[2026-04-08 20:35:03] 2026-04-09 00:34:15,385 | INFO     | will attempt to kill all subprocesses of pid=2068343
[2026-04-08 20:35:03] 2026-04-09 00:34:17,006 | INFO     | process IDs to be killed: [2068343] (in reverse order)
[2026-04-08 20:35:03] 2026-04-09 00:34:17,359 | WARNING  | found no corresponding commands to process id(s)
[2026-04-08 20:35:03] 2026-04-09 00:34:17,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-08 20:35:03] 2026-04-09 00:34:17,454 | INFO     | did not find any defunct processes belonging to 2068343
[2026-04-08 20:35:03] 2026-04-09 00:34:17,472 | INFO     | did not find any defunct processes belonging to 2068343
[2026-04-08 20:35:03] 2026-04-09 00:34:17,473 | INFO     | Ready for new job
[2026-04-08 20:35:03] 2026-04-09 00:34:17,476 | INFO     | **************************************
[2026-04-08 20:35:03] 2026-04-09 00:34:17,476 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-08 20:35:03] 2026-04-09 00:34:17,476 | INFO     | **************************************
[2026-04-08 20:35:03] 2026-04-09 00:34:17,477 | INFO     | 
[2026-04-08 20:35:03] 2026-04-09 00:34:17,478 | INFO     | architecture information:
[2026-04-08 20:35:03] 2026-04-09 00:34:17,480 | INFO     | executing command: cat /etc/os-release
[2026-04-08 20:35:03] 2026-04-09 00:34:17,569 | INFO     | cat /etc/os-release:
[2026-04-08 20:35:03] NAME="CentOS Linux"
[2026-04-08 20:35:03] VERSION="7 (Core)"
[2026-04-08 20:35:03] ID="centos"
[2026-04-08 20:35:03] ID_LIKE="rhel fedora"
[2026-04-08 20:35:03] VERSION_ID="7"
[2026-04-08 20:35:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-08 20:35:03] ANSI_COLOR="0;31"
[2026-04-08 20:35:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-08 20:35:03] HOME_URL="https://www.centos.org/"
[2026-04-08 20:35:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-08 20:35:03] 
[2026-04-08 20:35:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-08 20:35:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-08 20:35:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-08 20:35:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-08 20:35:03] 
[2026-04-08 20:35:03] 2026-04-09 00:34:17,569 | INFO     | **************************************
[2026-04-08 20:35:03] 2026-04-09 00:34:18,081 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-08 20:35:03] 2026-04-09 00:34:18,292 | INFO     | sufficient remaining disk space (53220474880 B)
[2026-04-08 20:35:03] 2026-04-09 00:34:18,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-08 20:35:03] 2026-04-09 00:34:18,292 | INFO     | current server update state: UPDATING_FINAL
[2026-04-08 20:35:03] 2026-04-09 00:34:18,293 | INFO     | update_server=False
[2026-04-08 20:35:03] 2026-04-09 00:34:18,293 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-08 20:35:03] 2026-04-09 00:34:18,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-08 20:35:03] 2026-04-09 00:34:18,325 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-08 20:35:03] 2026-04-09 00:34:18,325 | INFO     | aborting loop
[2026-04-08 20:35:03] 2026-04-09 00:34:19,135 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-08 20:35:03] 2026-04-09 00:34:19,164 | INFO     | all job control threads have been joined
[2026-04-08 20:35:03] 2026-04-09 00:34:19,167 | INFO     | all data control threads have been joined
[2026-04-08 20:35:03] 2026-04-09 00:34:19,302 | INFO     | [job] retrieve thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:19,330 | INFO     | [job] job monitor thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:19,554 | INFO     | [payload] validate_post thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:19,661 | INFO     | [payload] failed_post thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:19,686 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:19,775 | INFO     | all payload control threads have been joined
[2026-04-08 20:35:03] 2026-04-09 00:34:20,144 | INFO     | [job] queue monitor thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:20,155 | INFO     | [job] create_data_payload thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:20,171 | INFO     | [job] control thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:20,180 | INFO     | [data] control thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:20,331 | INFO     | [data] copytool_out thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:20,348 | INFO     | [payload] validate_pre thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:20,365 | INFO     | [data] copytool_in thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:20,418 | INFO     | [job] validate thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:20,677 | INFO     | [payload] execute_payloads thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:20,781 | INFO     | [payload] control thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:21,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-08 20:35:03] 2026-04-09 00:34:25,326 | INFO     | [data] queue_monitor thread has finished
[2026-04-08 20:35:03] 2026-04-09 00:34:49,825 | INFO     | PID=2061448 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-08 20:35:03] 2026-04-09 00:34:49,825 | INFO     | .. there are 35 such processes running
[2026-04-08 20:35:03] 2026-04-09 00:34:49,827 | INFO     | found 0 job(s) in 20 queues
[2026-04-08 20:35:03] 2026-04-09 00:34:49,827 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-08 20:35:03] 2026-04-09 00:34:49,827 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-08 20:35:03] 2026-04-09 00:34:55,138 | INFO     | [monitor] cgroup control has ended
[2026-04-08 20:35:03] 2026-04-09 00:34:56,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140287563216704)>', '<ExcThread(monitor, started 140286835545856)>']
[2026-04-08 20:35:03] 2026-04-09 00:34:56,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-08 20:35:03] 2026-04-09 00:34:56,876 | INFO     | [monitor] control thread has ended
[2026-04-08 20:35:03] 2026-04-09 00:35:01,164 | INFO     | all workflow threads have been joined
[2026-04-08 20:35:03] 2026-04-09 00:35:01,165 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-08 20:35:03] 2026-04-09 00:35:01,165 | INFO     | traces error code: 0
[2026-04-08 20:35:03] 2026-04-09 00:35:01,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-08 20:35:03] 2026-04-09 00:35:02,213 [wrapper] ==== pilot stdout END ====
[2026-04-08 20:35:03] 2026-04-09 00:35:02,226 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-08 20:35:03] 2026-04-09 00:35:02,235 [wrapper] pilotpid: 2061448
[2026-04-08 20:35:03] 2026-04-09 00:35:02,312 [wrapper] Pilot exit status: 0
[2026-04-08 20:35:03] 2026-04-09 00:35:02,487 [wrapper] pandaids: 7074759208
[2026-04-08 20:35:03] 2026-04-09 00:35:02,880 [wrapper] cleanup supervisor_pilot 3449224 2061449
[2026-04-08 20:35:03] 2026-04-09 00:35:02,914 [wrapper] Test setup, not cleaning
[2026-04-08 20:35:03] 2026-04-09 00:35:02,921 [wrapper] apfmon messages muted
[2026-04-08 20:35:03] 2026-04-09 00:35:02,930 [wrapper] ==== wrapper stdout END ====
[2026-04-08 20:35:03] 2026-04-09 00:35:02,934 [wrapper] ==== wrapper stderr END ====
[2026-04-08 20:35:03]  *** Error codes and diagnostics ***
[2026-04-08 20:35:03]     "exeErrorCode": 0,
[2026-04-08 20:35:03]     "pilotErrorCode": 0,
[2026-04-08 20:35:03]  *** Listing of results directory ***
[2026-04-08 20:35:03] total 444656
[2026-04-08 20:35:03] -rwx------. 1 boincer umatlas     36322 Mar 31 16:59 runpilot2-wrapper.sh
[2026-04-08 20:35:03] -rw-r--r--. 1 boincer umatlas    644190 Apr  8 11:50 pilot3.tar.gz
[2026-04-08 20:35:03] -rw-r--r--. 1 boincer umatlas      5094 Apr  8 11:54 queuedata.json
[2026-04-08 20:35:03] -rw-r--r--. 1 boincer umatlas       100 Apr  8 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-08 20:35:03] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  8 12:21 run_atlas
[2026-04-08 20:35:03] -rw-r--r--. 1 boincer umatlas       105 Apr  8 12:21 job.xml
[2026-04-08 20:35:03] -rw-r--r--. 2 boincer umatlas 265720343 Apr  8 12:21 EVNT.49474218._000007.pool.root.1
[2026-04-08 20:35:03] -rw-r--r--. 2 boincer umatlas     15665 Apr  8 12:21 start_atlas.sh
[2026-04-08 20:35:03] drwxrwx--x. 2 boincer umatlas      4096 Apr  8 12:21 shared
[2026-04-08 20:35:03] -rw-r--r--. 2 boincer umatlas    656930 Apr  8 12:21 input.tar.gz
[2026-04-08 20:35:03] -rw-r--r--. 1 boincer umatlas         0 Apr  8 12:21 boinc_lockfile
[2026-04-08 20:35:03] -rw-r--r--. 1 boincer umatlas      2601 Apr  8 12:21 pandaJob.out
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas        57 Apr  8 12:21 setup.sh.local
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas    997205 Apr  8 12:22 agis_schedconf.cvmfs.json
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas       438 Apr  8 12:22 workernode_map.json
[2026-04-08 20:35:03] drwx------. 5 boincer umatlas      4096 Apr  8 12:23 pilot3
[2026-04-08 20:35:03] -rw-r--r--. 1 boincer umatlas      6573 Apr  8 20:30 init_data.xml
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas 180064976 Apr  8 20:32 HITS.49499447._000163.pool.root.1
[2026-04-08 20:35:03] -rw-r--r--. 1 boincer umatlas       488 Apr  8 20:32 boinc_task_state.xml
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas      1043 Apr  8 20:33 memory_monitor_summary.json
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas   1511579 Apr  8 20:34 agis_ddmendpoints.agis.ALL.json
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas    563395 Apr  8 20:34 log.49499447._000163.job.log.tgz.1
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas      6397 Apr  8 20:34 heartbeat_new.json
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas      6288 Apr  8 20:34 heartbeat.json
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas        95 Apr  8 20:34 pilot_heartbeat.json
[2026-04-08 20:35:03] -rw-r--r--. 1 boincer umatlas      8192 Apr  8 20:35 boinc_mmap_file
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas      4819 Apr  8 20:35 pilotlog.txt
[2026-04-08 20:35:03] -rw-r--r--. 1 boincer umatlas        28 Apr  8 20:35 wrapper_checkpoint.txt
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas   2176968 Apr  8 20:35 log.49499447._000163.job.log.1
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas       357 Apr  8 20:35 output.list
[2026-04-08 20:35:03] -rw-r--r--. 1 boincer umatlas       410 Apr  8 20:35 runtime_log
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas   2754560 Apr  8 20:35 result.tar.gz
[2026-04-08 20:35:03] -rw-r--r--. 1 boincer umatlas      8951 Apr  8 20:35 runtime_log.err
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas       655 Apr  8 20:35 35950166abb3.diag
[2026-04-08 20:35:03] -rw-r--r--. 1 boincer umatlas     21307 Apr  8 20:35 stderr.txt
[2026-04-08 20:35:03] HITS file was successfully produced:
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas 180064976 Apr  8 20:32 shared/HITS.pool.root.1
[2026-04-08 20:35:03]  *** Contents of shared directory: ***
[2026-04-08 20:35:03] total 438700
[2026-04-08 20:35:03] -rw-r--r--. 2 boincer umatlas 265720343 Apr  8 12:21 ATLAS.root_0
[2026-04-08 20:35:03] -rw-r--r--. 2 boincer umatlas     15665 Apr  8 12:21 start_atlas.sh
[2026-04-08 20:35:03] -rw-r--r--. 2 boincer umatlas    656930 Apr  8 12:21 input.tar.gz
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas 180064976 Apr  8 20:32 HITS.pool.root.1
[2026-04-08 20:35:03] -rw-------. 1 boincer umatlas   2754560 Apr  8 20:35 result.tar.gz
20:35:26 (2056441): run_atlas exited; CPU time 55417.352887
20:35:26 (2056441): called boinc_finish(0)

</stderr_txt>
]]>

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