Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:22:51 (183144): wrapper (7.7.26015): starting
12:22:51 (183144): wrapper: running run_atlas (--nthreads 10)
[2026-04-08 12:22:51] Arguments: --nthreads 10
[2026-04-08 12:22:51] Threads: 10
[2026-04-08 12:22:51] Checking for CVMFS
[2026-04-08 12:22:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-08 12:22:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-08 12:22:53] Running cvmfs_config stat atlas.cern.ch
[2026-04-08 12:22:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-08 12:22:54] 2.13.3.0 15733 220366 709780 158226 0 400 27282320 32935937 22381 16776704 0 980944400 99.677 798737376 28135 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-08 12:22:54] CVMFS is ok
[2026-04-08 12:22:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-08 12:22:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-08 12:22:54] Further information can be found at the LHC@home message board.
[2026-04-08 12:22:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-08 12:22:54] Checking for apptainer binary...
[2026-04-08 12:22:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-08 12:22:54] Running /usr/bin/apptainer --version
[2026-04-08 12:22:54] apptainer version 1.4.5-2.el9
[2026-04-08 12:23:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-08 12:23:15] c-8-39.aglt2.org
[2026-04-08 12:23:15] apptainer works
[2026-04-08 12:23:15] Set ATHENA_PROC_NUMBER=10
[2026-04-08 12:23:15] Set ATHENA_CORE_NUMBER=10
[2026-04-08 12:23:15] Starting ATLAS job with PandaID=7074440208
[2026-04-08 12:23:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:11:24 (1259099): wrapper (7.7.26015): starting
18:11:24 (1259099): wrapper: running run_atlas (--nthreads 9)
[2026-04-08 18:11:24] Arguments: --nthreads 9
[2026-04-08 18:11:24] Threads: 9
[2026-04-08 18:11:24] This job has been restarted, cleaning up previous attempt
[2026-04-08 18:11:24] Checking for CVMFS
[2026-04-08 18:11:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-08 18:11:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-08 18:11:25] Running cvmfs_config stat atlas.cern.ch
[2026-04-08 18:11:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-08 18:11:26] 2.13.3.0 15733 220714 701056 158235 1 66 31160106 32935936 15590 16776704 0 991967903 99.680 799447737 28132 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-08 18:11:26] CVMFS is ok
[2026-04-08 18:11:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-08 18:11:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-08 18:11:26] Further information can be found at the LHC@home message board.
[2026-04-08 18:11:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-08 18:11:26] Checking for apptainer binary...
[2026-04-08 18:11:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-08 18:11:26] Running /usr/bin/apptainer --version
[2026-04-08 18:11:26] apptainer version 1.4.5-2.el9
[2026-04-08 18:11:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-08 18:11:26] c-8-39.aglt2.org
[2026-04-08 18:11:26] apptainer works
[2026-04-08 18:11:26] Set ATHENA_PROC_NUMBER=9
[2026-04-08 18:11:26] Set ATHENA_CORE_NUMBER=9
[2026-04-08 18:11:26] Starting ATLAS job with PandaID=7074440208
[2026-04-08 18:11:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-09 04:53:39]  *** The last 200 lines of the pilot log: ***
[2026-04-09 04:53:39] 2026-04-09 08:53:02,150 | INFO     | maximum number of monitored processes: 6
[2026-04-09 04:53:39] 2026-04-09 08:53:02,989 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-09 04:53:39] 2026-04-09 08:53:03,119 | INFO     | job 7074440208 has state=finished
[2026-04-09 04:53:39] 2026-04-09 08:53:03,120 | INFO     | preparing for final server update for job 7074440208 in state='finished'
[2026-04-09 04:53:39] 2026-04-09 08:53:03,121 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7074440208/jobReport.json
[2026-04-09 04:53:39] 2026-04-09 08:53:03,123 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-09 04:53:39] 2026-04-09 08:53:03,123 | INFO     | this job has now completed (state=finished)
[2026-04-09 04:53:39] 2026-04-09 08:53:03,124 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-09 04:53:39] 2026-04-09 08:53:03,124 | INFO     | log transfer has been attempted: DONE
[2026-04-09 04:53:39] 2026-04-09 08:53:03,124 | INFO     | job 7074440208 has finished - writing final server update
[2026-04-09 04:53:39] 2026-04-09 08:53:03,124 | INFO     | total number of processed events: 400 (read)
[2026-04-09 04:53:39] 2026-04-09 08:53:03,137 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7074440208/memory_monitor_summary.json (trf name=prmon)
[2026-04-09 04:53:39] 2026-04-09 08:53:03,142 | INFO     | extracted standard info from prmon json
[2026-04-09 04:53:39] 2026-04-09 08:53:03,143 | INFO     | extracted standard memory fields from prmon json
[2026-04-09 04:53:39] 2026-04-09 08:53:03,143 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-09 04:53:39] 2026-04-09 08:53:03,143 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-09 04:53:39] 2026-04-09 08:53:03,172 | INFO     | fitting pss+swap vs Time
[2026-04-09 04:53:39] 2026-04-09 08:53:03,174 | INFO     | sum of square deviations: 77530845178.6428
[2026-04-09 04:53:39] 2026-04-09 08:53:03,200 | INFO     | sum of deviations: 41791551394.64288
[2026-04-09 04:53:39] 2026-04-09 08:53:03,201 | INFO     | mean x (centered): 0.0
[2026-04-09 04:53:39] 2026-04-09 08:53:03,201 | INFO     | mean y: 2588802.6428571427
[2026-04-09 04:53:39] 2026-04-09 08:53:03,201 | INFO     | intersect: 2588802.6428571427
[2026-04-09 04:53:39] 2026-04-09 08:53:03,202 | INFO     | chi2: 2.8279506712951603
[2026-04-09 04:53:39] 2026-04-09 08:53:03,203 | INFO     | sum of square deviations: 75699457213.09773
[2026-04-09 04:53:39] 2026-04-09 08:53:03,221 | INFO     | sum of deviations: 81865323210.35207
[2026-04-09 04:53:39] 2026-04-09 08:53:03,222 | INFO     | mean x (centered): 0.0
[2026-04-09 04:53:39] 2026-04-09 08:53:03,222 | INFO     | mean y: 2592117.456
[2026-04-09 04:53:39] 2026-04-09 08:53:03,222 | INFO     | intersect: 2592117.456
[2026-04-09 04:53:39] 2026-04-09 08:53:03,227 | INFO     | chi2: 2.1353012999521273
[2026-04-09 04:53:39] 2026-04-09 08:53:03,228 | INFO     | current chi2=2.1353012999521273 (change=24.49297925786696 %)
[2026-04-09 04:53:39] 2026-04-09 08:53:03,228 | INFO     | right removable region: 624
[2026-04-09 04:53:39] 2026-04-09 08:53:03,229 | INFO     | sum of square deviations: 75699222727.84052
[2026-04-09 04:53:39] 2026-04-09 08:53:03,252 | INFO     | sum of deviations: -90268327664.78407
[2026-04-09 04:53:39] 2026-04-09 08:53:03,252 | INFO     | mean x (centered): 0.0
[2026-04-09 04:53:39] 2026-04-09 08:53:03,252 | INFO     | mean y: 2599771.3584
[2026-04-09 04:53:39] 2026-04-09 08:53:03,253 | INFO     | intersect: 2599771.3584
[2026-04-09 04:53:39] 2026-04-09 08:53:03,254 | INFO     | chi2: 0.947163239489377
[2026-04-09 04:53:39] 2026-04-09 08:53:03,254 | INFO     | current chi2=0.947163239489377 (change=66.50708058300077 %)
[2026-04-09 04:53:39] 2026-04-09 08:53:03,259 | INFO     | sum of square deviations: 73896784598.40506
[2026-04-09 04:53:39] 2026-04-09 08:53:03,269 | INFO     | sum of deviations: -115673696598.22424
[2026-04-09 04:53:39] 2026-04-09 08:53:03,269 | INFO     | mean x (centered): 0.0
[2026-04-09 04:53:39] 2026-04-09 08:53:03,269 | INFO     | mean y: 2601919.0112903225
[2026-04-09 04:53:39] 2026-04-09 08:53:03,269 | INFO     | intersect: 2601919.0112903225
[2026-04-09 04:53:39] 2026-04-09 08:53:03,270 | INFO     | chi2: 0.8822079153803569
[2026-04-09 04:53:39] 2026-04-09 08:53:03,270 | INFO     | current chi2=0.8822079153803569 (change=6.857880606096788 %)
[2026-04-09 04:53:39] 2026-04-09 08:53:03,270 | INFO     | left removable region: 10
[2026-04-09 04:53:39] 2026-04-09 08:53:03,271 | INFO     | sum of square deviations: 71772064102.1499
[2026-04-09 04:53:39] 2026-04-09 08:53:03,281 | INFO     | sum of deviations: -74860906213.2117
[2026-04-09 04:53:39] 2026-04-09 08:53:03,281 | INFO     | mean x (centered): 0.0
[2026-04-09 04:53:39] 2026-04-09 08:53:03,281 | INFO     | mean y: 2605405.7182410425
[2026-04-09 04:53:39] 2026-04-09 08:53:03,281 | INFO     | intersect: 2605405.7182410425
[2026-04-09 04:53:39] 2026-04-09 08:53:03,282 | INFO     | chi2: 0.1816072471276579
[2026-04-09 04:53:39] 2026-04-09 08:53:03,283 | INFO     | current memory leak: -1.04 B/s (using 614 data points, chi2=0.18)
[2026-04-09 04:53:39] 2026-04-09 08:53:03,283 | INFO     | could have reported an average CPU frequency of 2504 MHz (25 samples)
[2026-04-09 04:53:39] 2026-04-09 08:53:03,284 | INFO     | ..............................
[2026-04-09 04:53:39] 2026-04-09 08:53:03,284 | INFO     | . Timing measurements:
[2026-04-09 04:53:39] 2026-04-09 08:53:03,284 | INFO     | . get job = 0 s
[2026-04-09 04:53:39] 2026-04-09 08:53:03,284 | INFO     | . initial setup = 3 s
[2026-04-09 04:53:39] 2026-04-09 08:53:03,284 | INFO     | . payload setup = 36 s
[2026-04-09 04:53:39] 2026-04-09 08:53:03,284 | INFO     | . stage-in = 0 s
[2026-04-09 04:53:39] 2026-04-09 08:53:03,284 | INFO     | . payload execution = 38399 s
[2026-04-09 04:53:39] 2026-04-09 08:53:03,284 | INFO     | . stage-out = 4 s
[2026-04-09 04:53:39] 2026-04-09 08:53:03,285 | INFO     | . log creation = 0 s
[2026-04-09 04:53:39] 2026-04-09 08:53:03,285 | INFO     | ..............................
[2026-04-09 04:53:39] 2026-04-09 08:53:03,570 | INFO     | 
[2026-04-09 04:53:39] 2026-04-09 08:53:03,571 | INFO     | job summary report
[2026-04-09 04:53:39] 2026-04-09 08:53:03,571 | INFO     | --------------------------------------------------
[2026-04-09 04:53:39] 2026-04-09 08:53:03,571 | INFO     | PanDA job id: 7074440208
[2026-04-09 04:53:39] 2026-04-09 08:53:03,571 | INFO     | task id: 49499824
[2026-04-09 04:53:39] 2026-04-09 08:53:03,571 | INFO     | errors: (none)
[2026-04-09 04:53:39] 2026-04-09 08:53:03,571 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-09 04:53:39] 2026-04-09 08:53:03,571 | INFO     | pilot state: finished 
[2026-04-09 04:53:39] 2026-04-09 08:53:03,571 | INFO     | transexitcode: 0
[2026-04-09 04:53:39] 2026-04-09 08:53:03,572 | INFO     | exeerrorcode: 0
[2026-04-09 04:53:39] 2026-04-09 08:53:03,572 | INFO     | exeerrordiag: 
[2026-04-09 04:53:39] 2026-04-09 08:53:03,572 | INFO     | exitcode: 0
[2026-04-09 04:53:39] 2026-04-09 08:53:03,572 | INFO     | exitmsg: OK
[2026-04-09 04:53:39] 2026-04-09 08:53:03,572 | INFO     | cpuconsumptiontime: 61871 s
[2026-04-09 04:53:39] 2026-04-09 08:53:03,572 | INFO     | nevents: 400
[2026-04-09 04:53:39] 2026-04-09 08:53:03,572 | INFO     | neventsw: 0
[2026-04-09 04:53:39] 2026-04-09 08:53:03,572 | INFO     | pid: 1281154
[2026-04-09 04:53:39] 2026-04-09 08:53:03,573 | INFO     | pgrp: 1281154
[2026-04-09 04:53:39] 2026-04-09 08:53:03,573 | INFO     | corecount: 9
[2026-04-09 04:53:39] 2026-04-09 08:53:03,573 | INFO     | event service: False
[2026-04-09 04:53:39] 2026-04-09 08:53:03,573 | INFO     | sizes: {0: 2279052, 1: 2279737, 2: 2281566, 13: 2281566, 38440: 2322575, 38444: 2331573, 38446: 2332015}
[2026-04-09 04:53:39] 2026-04-09 08:53:03,573 | INFO     | --------------------------------------------------
[2026-04-09 04:53:39] 2026-04-09 08:53:03,573 | INFO     | 
[2026-04-09 04:53:39] 2026-04-09 08:53:03,573 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-09 04:53:39] 2026-04-09 08:53:03,633 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,634 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,634 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,634 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,634 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,635 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,635 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,635 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,635 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,635 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,635 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,635 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,636 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,636 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,636 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,636 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,636 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-09 04:53:39] 2026-04-09 08:53:03,636 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,636 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-09 04:53:39] 2026-04-09 08:53:03,637 | INFO     | job 7074440208 has completed (purged errors)
[2026-04-09 04:53:39] 2026-04-09 08:53:03,637 | INFO     | overall cleanup function is called
[2026-04-09 04:53:39] 2026-04-09 08:53:04,650 | INFO     | --- collectZombieJob: --- 10, [1281154]
[2026-04-09 04:53:39] 2026-04-09 08:53:04,651 | INFO     | zombie collector waiting for pid 1281154
[2026-04-09 04:53:39] 2026-04-09 08:53:04,651 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-09 04:53:39] 2026-04-09 08:53:04,651 | INFO     | collected zombie processes
[2026-04-09 04:53:39] 2026-04-09 08:53:04,651 | INFO     | will attempt to kill all subprocesses of pid=1281154
[2026-04-09 04:53:39] 2026-04-09 08:53:05,612 | INFO     | process IDs to be killed: [1281154] (in reverse order)
[2026-04-09 04:53:39] 2026-04-09 08:53:06,293 | WARNING  | found no corresponding commands to process id(s)
[2026-04-09 04:53:39] 2026-04-09 08:53:06,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-09 04:53:39] 2026-04-09 08:53:06,312 | INFO     | did not find any defunct processes belonging to 1281154
[2026-04-09 04:53:39] 2026-04-09 08:53:06,394 | INFO     | did not find any defunct processes belonging to 1281154
[2026-04-09 04:53:39] 2026-04-09 08:53:06,395 | INFO     | Ready for new job
[2026-04-09 04:53:39] 2026-04-09 08:53:06,399 | INFO     | **************************************
[2026-04-09 04:53:39] 2026-04-09 08:53:06,400 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-09 04:53:39] 2026-04-09 08:53:06,400 | INFO     | **************************************
[2026-04-09 04:53:39] 2026-04-09 08:53:06,400 | INFO     | 
[2026-04-09 04:53:39] 2026-04-09 08:53:06,403 | INFO     | architecture information:
[2026-04-09 04:53:39] 2026-04-09 08:53:06,407 | INFO     | executing command: cat /etc/os-release
[2026-04-09 04:53:39] 2026-04-09 08:53:06,499 | INFO     | cat /etc/os-release:
[2026-04-09 04:53:39] NAME="CentOS Linux"
[2026-04-09 04:53:39] VERSION="7 (Core)"
[2026-04-09 04:53:39] ID="centos"
[2026-04-09 04:53:39] ID_LIKE="rhel fedora"
[2026-04-09 04:53:39] VERSION_ID="7"
[2026-04-09 04:53:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-09 04:53:39] ANSI_COLOR="0;31"
[2026-04-09 04:53:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-09 04:53:39] HOME_URL="https://www.centos.org/"
[2026-04-09 04:53:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-09 04:53:39] 
[2026-04-09 04:53:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-09 04:53:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-09 04:53:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-09 04:53:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-09 04:53:39] 
[2026-04-09 04:53:39] 2026-04-09 08:53:06,500 | INFO     | **************************************
[2026-04-09 04:53:39] 2026-04-09 08:53:07,003 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-09 04:53:39] 2026-04-09 08:53:07,145 | INFO     | sufficient remaining disk space (75126276096 B)
[2026-04-09 04:53:39] 2026-04-09 08:53:07,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-09 04:53:39] 2026-04-09 08:53:07,145 | INFO     | current server update state: UPDATING_FINAL
[2026-04-09 04:53:39] 2026-04-09 08:53:07,146 | INFO     | update_server=False
[2026-04-09 04:53:39] 2026-04-09 08:53:07,146 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-09 04:53:39] 2026-04-09 08:53:07,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-09 04:53:39] 2026-04-09 08:53:07,189 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-09 04:53:39] 2026-04-09 08:53:07,190 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-09 04:53:39] 2026-04-09 08:53:07,190 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-09 04:53:39] 2026-04-09 08:53:07,190 | INFO     | will abort loop
[2026-04-09 04:53:39] 2026-04-09 08:53:07,706 | INFO     | all job control threads have been joined
[2026-04-09 04:53:39] 2026-04-09 08:53:07,785 | INFO     | all data control threads have been joined
[2026-04-09 04:53:39] 2026-04-09 08:53:07,821 | INFO     | all payload control threads have been joined
[2026-04-09 04:53:39] 2026-04-09 08:53:08,152 | INFO     | [job] retrieve thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:08,222 | INFO     | [job] job monitor thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:08,460 | INFO     | [payload] execute_payloads thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:08,469 | INFO     | [data] copytool_in thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:08,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-09 04:53:39] 2026-04-09 08:53:08,712 | INFO     | [job] control thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:08,786 | INFO     | [job] validate thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:08,809 | INFO     | [job] create_data_payload thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:08,810 | INFO     | [data] control thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:08,814 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:08,838 | INFO     | [payload] control thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:09,124 | INFO     | [payload] validate_pre thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:09,144 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-09 04:53:39] 2026-04-09 08:53:09,154 | INFO     | [data] copytool_out thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:09,165 | INFO     | [payload] failed_post thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:09,490 | INFO     | [job] queue monitor thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:09,514 | INFO     | [payload] validate_post thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:13,154 | INFO     | [data] queue_monitor thread has finished
[2026-04-09 04:53:39] 2026-04-09 08:53:18,100 | INFO     | [monitor] cgroup control has ended
[2026-04-09 04:53:39] 2026-04-09 08:53:18,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140211259815744)>', '<ExcThread(monitor, started 140210406942464)>']
[2026-04-09 04:53:39] 2026-04-09 08:53:23,527 | INFO     | all workflow threads have been joined
[2026-04-09 04:53:39] 2026-04-09 08:53:23,542 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-09 04:53:39] 2026-04-09 08:53:23,542 | INFO     | traces error code: 0
[2026-04-09 04:53:39] 2026-04-09 08:53:23,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-09 04:53:39] 2026-04-09 08:53:38,320 | INFO     | PID=1269845 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-09 04:53:39] 2026-04-09 08:53:38,320 | INFO     | .. there are 23 such processes running
[2026-04-09 04:53:39] 2026-04-09 08:53:38,321 | INFO     | found 0 job(s) in 20 queues
[2026-04-09 04:53:39] 2026-04-09 08:53:38,321 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-09 04:53:39] 2026-04-09 08:53:38,321 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-09 04:53:39] 2026-04-09 08:53:38,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-09 04:53:39] 2026-04-09 08:53:38,322 | INFO     | [monitor] control thread has ended
[2026-04-09 04:53:39] 2026-04-09 08:53:38,669 [wrapper] ==== pilot stdout END ====
[2026-04-09 04:53:39] 2026-04-09 08:53:38,673 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-09 04:53:39] 2026-04-09 08:53:38,676 [wrapper] pilotpid: 1269845
[2026-04-09 04:53:39] 2026-04-09 08:53:38,679 [wrapper] Pilot exit status: 0
[2026-04-09 04:53:39] 2026-04-09 08:53:38,729 [wrapper] pandaids: 7074440208 7074440208
[2026-04-09 04:53:39] 2026-04-09 08:53:38,809 [wrapper] cleanup supervisor_pilot 3390049 1269846
[2026-04-09 04:53:39] 2026-04-09 08:53:38,816 [wrapper] Test setup, not cleaning
[2026-04-09 04:53:39] 2026-04-09 08:53:38,836 [wrapper] apfmon messages muted
[2026-04-09 04:53:39] 2026-04-09 08:53:38,857 [wrapper] ==== wrapper stdout END ====
[2026-04-09 04:53:39] 2026-04-09 08:53:38,881 [wrapper] ==== wrapper stderr END ====
[2026-04-09 04:53:39]  *** Error codes and diagnostics ***
[2026-04-09 04:53:39]     "exeErrorCode": 0,
[2026-04-09 04:53:39]     "pilotErrorCode": 0,
[2026-04-09 04:53:39]  *** Listing of results directory ***
[2026-04-09 04:53:39] total 700712
[2026-04-09 04:53:39] -rwx------. 1 boincer umatlas     36322 Mar 31 16:53 runpilot2-wrapper.sh
[2026-04-09 04:53:39] drwx------. 5 boincer umatlas      4096 Apr  1 08:07 pilot3
[2026-04-09 04:53:39] -rw-r--r--. 1 boincer umatlas    644190 Apr  8 11:28 pilot3.tar.gz
[2026-04-09 04:53:39] -rw-r--r--. 1 boincer umatlas      5094 Apr  8 11:46 queuedata.json
[2026-04-09 04:53:39] -rw-r--r--. 1 boincer umatlas       100 Apr  8 12:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-09 04:53:39] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  8 12:22 run_atlas
[2026-04-09 04:53:39] -rw-r--r--. 1 boincer umatlas       105 Apr  8 12:22 job.xml
[2026-04-09 04:53:39] -rw-r--r--. 3 boincer umatlas 261945568 Apr  8 12:22 EVNT.49474788._000004.pool.root.1
[2026-04-09 04:53:39] -rw-r--r--. 3 boincer umatlas 261945568 Apr  8 12:22 ATLAS.root_0
[2026-04-09 04:53:39] -rw-r--r--. 2 boincer umatlas    656918 Apr  8 12:22 input.tar.gz
[2026-04-09 04:53:39] -rw-r--r--. 2 boincer umatlas     15665 Apr  8 12:22 start_atlas.sh
[2026-04-09 04:53:39] drwxrwx--x. 2 boincer umatlas      4096 Apr  8 12:22 shared
[2026-04-09 04:53:39] -rw-r--r--. 1 boincer umatlas         0 Apr  8 12:22 boinc_lockfile
[2026-04-09 04:53:39] -rw-r--r--. 1 boincer umatlas      2569 Apr  8 18:11 pandaJob.out
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas        57 Apr  8 18:11 setup.sh.local
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas    997887 Apr  8 18:12 agis_schedconf.cvmfs.json
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas       439 Apr  8 18:12 workernode_map.json
[2026-04-09 04:53:39] -rw-r--r--. 1 boincer umatlas      6530 Apr  9 04:49 init_data.xml
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas 182940914 Apr  9 04:52 HITS.49499824._000088.pool.root.1
[2026-04-09 04:53:39] -rw-r--r--. 1 boincer umatlas       489 Apr  9 04:52 boinc_task_state.xml
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas      1057 Apr  9 04:52 memory_monitor_summary.json
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas   1511579 Apr  9 04:52 agis_ddmendpoints.agis.ALL.json
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas    583680 Apr  9 04:53 log.49499824._000088.job.log.tgz.1
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas      6395 Apr  9 04:53 heartbeat_new.json
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas      6286 Apr  9 04:53 heartbeat.json
[2026-04-09 04:53:39] -rw-r--r--. 1 boincer umatlas      8192 Apr  9 04:53 boinc_mmap_file
[2026-04-09 04:53:39] -rw-r--r--. 1 boincer umatlas        29 Apr  9 04:53 wrapper_checkpoint.txt
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas        96 Apr  9 04:53 pilot_heartbeat.json
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas       823 Apr  9 04:53 pilotlog.txt
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas   2732883 Apr  9 04:53 log.49499824._000088.job.log.1
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas       357 Apr  9 04:53 output.list
[2026-04-09 04:53:39] -rw-r--r--. 1 boincer umatlas       410 Apr  9 04:53 runtime_log
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas   3338240 Apr  9 04:53 result.tar.gz
[2026-04-09 04:53:39] -rw-r--r--. 1 boincer umatlas      9039 Apr  9 04:53 runtime_log.err
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas       781 Apr  9 04:53 3465ce23681c.diag
[2026-04-09 04:53:39] -rw-r--r--. 1 boincer umatlas     23355 Apr  9 04:53 stderr.txt
[2026-04-09 04:53:39] HITS file was successfully produced:
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas 182940914 Apr  9 04:52 shared/HITS.pool.root.1
[2026-04-09 04:53:39]  *** Contents of shared directory: ***
[2026-04-09 04:53:39] total 438388
[2026-04-09 04:53:39] -rw-r--r--. 3 boincer umatlas 261945568 Apr  8 12:22 ATLAS.root_0
[2026-04-09 04:53:39] -rw-r--r--. 2 boincer umatlas    656918 Apr  8 12:22 input.tar.gz
[2026-04-09 04:53:39] -rw-r--r--. 2 boincer umatlas     15665 Apr  8 12:22 start_atlas.sh
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas 182940914 Apr  9 04:52 HITS.pool.root.1
[2026-04-09 04:53:39] -rw-------. 1 boincer umatlas   3338240 Apr  9 04:53 result.tar.gz
04:53:41 (1259099): run_atlas exited; CPU time 63752.726933
04:53:41 (1259099): called boinc_finish(0)

</stderr_txt>
]]>

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