Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:40:00 (789649): wrapper (7.7.26015): starting
06:40:00 (789649): wrapper: running run_atlas (--nthreads 8)
[2026-04-08 06:40:00] Arguments: --nthreads 8
[2026-04-08 06:40:00] Threads: 8
[2026-04-08 06:40:00] Checking for CVMFS
[2026-04-08 06:40:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-08 06:40:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-08 06:40:01] Running cvmfs_config stat atlas.cern.ch
[2026-04-08 06:40:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-08 06:40:03] 2.13.3.0 11160 221462 688420 158216 1 464 24792467 32935937 18290 16776704 0 701040307 99.573 933978580 39121 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-08 06:40:03] CVMFS is ok
[2026-04-08 06:40:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-08 06:40:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-08 06:40:03] Further information can be found at the LHC@home message board.
[2026-04-08 06:40:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-08 06:40:03] Checking for apptainer binary...
[2026-04-08 06:40:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-08 06:40:03] Running /usr/bin/apptainer --version
[2026-04-08 06:40:04] apptainer version 1.4.5-2.el9
[2026-04-08 06:40:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-08 06:40:05] c6-2-29-2.aglt2.org
[2026-04-08 06:40:05] apptainer works
[2026-04-08 06:40:05] Set ATHENA_PROC_NUMBER=8
[2026-04-08 06:40:05] Set ATHENA_CORE_NUMBER=8
[2026-04-08 06:40:05] Starting ATLAS job with PandaID=7073094823
[2026-04-08 06:40:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-08 14:31:12]  *** The last 200 lines of the pilot log: ***
[2026-04-08 14:31:12] 2026-04-08 18:30:31,415 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-08 14:31:12] 2026-04-08 18:30:31,415 | INFO     | log transfer has been attempted: DONE
[2026-04-08 14:31:12] 2026-04-08 18:30:31,415 | INFO     | job 7073094823 has finished - writing final server update
[2026-04-08 14:31:12] 2026-04-08 18:30:31,450 | INFO     | total number of processed events: 400 (read)
[2026-04-08 14:31:12] 2026-04-08 18:30:31,540 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7073094823/memory_monitor_summary.json (trf name=prmon)
[2026-04-08 14:31:12] 2026-04-08 18:30:31,541 | INFO     | extracted standard info from prmon json
[2026-04-08 14:31:12] 2026-04-08 18:30:31,541 | INFO     | extracted standard memory fields from prmon json
[2026-04-08 14:31:12] 2026-04-08 18:30:31,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-08 14:31:12] 2026-04-08 18:30:31,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-08 14:31:12] 2026-04-08 18:30:31,608 | INFO     | fitting pss+swap vs Time
[2026-04-08 14:31:12] 2026-04-08 18:30:31,633 | INFO     | sum of square deviations: 29986016060.239555
[2026-04-08 14:31:12] 2026-04-08 18:30:31,679 | INFO     | sum of deviations: 273242156574.9803
[2026-04-08 14:31:12] 2026-04-08 18:30:31,680 | INFO     | mean x (centered): 0.0
[2026-04-08 14:31:12] 2026-04-08 18:30:31,680 | INFO     | mean y: 2461104.7843137253
[2026-04-08 14:31:12] 2026-04-08 18:30:31,680 | INFO     | intersect: 2461104.7843137253
[2026-04-08 14:31:12] 2026-04-08 18:30:31,681 | INFO     | chi2: 6.095904752901373
[2026-04-08 14:31:12] 2026-04-08 18:30:31,681 | INFO     | sum of square deviations: 29016728771.53301
[2026-04-08 14:31:12] 2026-04-08 18:30:31,707 | INFO     | sum of deviations: 331707848314.2951
[2026-04-08 14:31:12] 2026-04-08 18:30:31,708 | INFO     | mean x (centered): 0.0
[2026-04-08 14:31:12] 2026-04-08 18:30:31,708 | INFO     | mean y: 2470239.2533039646
[2026-04-08 14:31:12] 2026-04-08 18:30:31,708 | INFO     | intersect: 2470239.2533039646
[2026-04-08 14:31:12] 2026-04-08 18:30:31,708 | INFO     | chi2: 4.531497159061089
[2026-04-08 14:31:12] 2026-04-08 18:30:31,709 | INFO     | current chi2=4.531497159061089 (change=25.6632552058117 %)
[2026-04-08 14:31:12] 2026-04-08 18:30:31,709 | INFO     | sum of square deviations: 28068503014.3652
[2026-04-08 14:31:12] 2026-04-08 18:30:31,731 | INFO     | sum of deviations: 327155848418.9284
[2026-04-08 14:31:12] 2026-04-08 18:30:31,731 | INFO     | mean x (centered): 0.0
[2026-04-08 14:31:12] 2026-04-08 18:30:31,731 | INFO     | mean y: 2469507.169265033
[2026-04-08 14:31:12] 2026-04-08 18:30:31,731 | INFO     | intersect: 2469507.169265033
[2026-04-08 14:31:12] 2026-04-08 18:30:31,732 | INFO     | chi2: 4.530598112976311
[2026-04-08 14:31:12] 2026-04-08 18:30:31,732 | INFO     | current chi2=4.530598112976311 (change=0.019839934865226533 %)
[2026-04-08 14:31:12] 2026-04-08 18:30:31,732 | INFO     | right removable region: 448
[2026-04-08 14:31:12] 2026-04-08 18:30:31,733 | INFO     | sum of square deviations: 29016634405.6937
[2026-04-08 14:31:12] 2026-04-08 18:30:31,745 | INFO     | sum of deviations: 135646514018.19846
[2026-04-08 14:31:12] 2026-04-08 18:30:31,746 | INFO     | mean x (centered): 0.0
[2026-04-08 14:31:12] 2026-04-08 18:30:31,746 | INFO     | mean y: 2482725.612334802
[2026-04-08 14:31:12] 2026-04-08 18:30:31,746 | INFO     | intersect: 2482725.612334802
[2026-04-08 14:31:12] 2026-04-08 18:30:31,746 | INFO     | chi2: 2.706809326146081
[2026-04-08 14:31:12] 2026-04-08 18:30:31,755 | INFO     | current chi2=2.706809326146081 (change=55.59626608572316 %)
[2026-04-08 14:31:12] 2026-04-08 18:30:31,756 | INFO     | sum of square deviations: 28068396876.400826
[2026-04-08 14:31:12] 2026-04-08 18:30:31,768 | INFO     | sum of deviations: 76764530866.45663
[2026-04-08 14:31:12] 2026-04-08 18:30:31,768 | INFO     | mean x (centered): 0.0
[2026-04-08 14:31:12] 2026-04-08 18:30:31,769 | INFO     | mean y: 2492172.6547884187
[2026-04-08 14:31:12] 2026-04-08 18:30:31,769 | INFO     | intersect: 2492172.6547884187
[2026-04-08 14:31:12] 2026-04-08 18:30:31,769 | INFO     | chi2: 2.073366689698676
[2026-04-08 14:31:12] 2026-04-08 18:30:31,769 | INFO     | current chi2=2.073366689698676 (change=23.401819637931137 %)
[2026-04-08 14:31:12] 2026-04-08 18:30:31,769 | INFO     | left removable region: 10
[2026-04-08 14:31:12] 2026-04-08 18:30:31,770 | INFO     | sum of square deviations: 26055491140.504692
[2026-04-08 14:31:12] 2026-04-08 18:30:31,786 | INFO     | sum of deviations: 133351134889.16898
[2026-04-08 14:31:12] 2026-04-08 18:30:31,787 | INFO     | mean x (centered): 0.0
[2026-04-08 14:31:12] 2026-04-08 18:30:31,787 | INFO     | mean y: 2501400.6529680365
[2026-04-08 14:31:12] 2026-04-08 18:30:31,787 | INFO     | intersect: 2501400.6529680365
[2026-04-08 14:31:12] 2026-04-08 18:30:31,788 | INFO     | chi2: 0.46721079374234387
[2026-04-08 14:31:12] 2026-04-08 18:30:31,788 | INFO     | current memory leak: 5.12 B/s (using 438 data points, chi2=0.47)
[2026-04-08 14:31:12] 2026-04-08 18:30:31,789 | INFO     | could have reported an average CPU frequency of 2870 MHz (19 samples)
[2026-04-08 14:31:12] 2026-04-08 18:30:31,797 | INFO     | ..............................
[2026-04-08 14:31:12] 2026-04-08 18:30:31,797 | INFO     | . Timing measurements:
[2026-04-08 14:31:12] 2026-04-08 18:30:31,797 | INFO     | . get job = 0 s
[2026-04-08 14:31:12] 2026-04-08 18:30:31,797 | INFO     | . initial setup = 38 s
[2026-04-08 14:31:12] 2026-04-08 18:30:31,797 | INFO     | . payload setup = 81 s
[2026-04-08 14:31:12] 2026-04-08 18:30:31,797 | INFO     | . stage-in = 0 s
[2026-04-08 14:31:12] 2026-04-08 18:30:31,798 | INFO     | . payload execution = 28002 s
[2026-04-08 14:31:12] 2026-04-08 18:30:31,798 | INFO     | . stage-out = 5 s
[2026-04-08 14:31:12] 2026-04-08 18:30:31,798 | INFO     | . log creation = 0 s
[2026-04-08 14:31:12] 2026-04-08 18:30:31,798 | INFO     | ..............................
[2026-04-08 14:31:12] 2026-04-08 18:30:32,222 | INFO     | 
[2026-04-08 14:31:12] 2026-04-08 18:30:32,222 | INFO     | job summary report
[2026-04-08 14:31:12] 2026-04-08 18:30:32,222 | INFO     | --------------------------------------------------
[2026-04-08 14:31:12] 2026-04-08 18:30:32,222 | INFO     | PanDA job id: 7073094823
[2026-04-08 14:31:12] 2026-04-08 18:30:32,222 | INFO     | task id: 49263208
[2026-04-08 14:31:12] 2026-04-08 18:30:32,222 | INFO     | errors: (none)
[2026-04-08 14:31:12] 2026-04-08 18:30:32,222 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-08 14:31:12] 2026-04-08 18:30:32,223 | INFO     | pilot state: finished 
[2026-04-08 14:31:12] 2026-04-08 18:30:32,223 | INFO     | transexitcode: 0
[2026-04-08 14:31:12] 2026-04-08 18:30:32,223 | INFO     | exeerrorcode: 0
[2026-04-08 14:31:12] 2026-04-08 18:30:32,223 | INFO     | exeerrordiag: 
[2026-04-08 14:31:12] 2026-04-08 18:30:32,223 | INFO     | exitcode: 0
[2026-04-08 14:31:12] 2026-04-08 18:30:32,223 | INFO     | exitmsg: OK
[2026-04-08 14:31:12] 2026-04-08 18:30:32,223 | INFO     | cpuconsumptiontime: 49155 s
[2026-04-08 14:31:12] 2026-04-08 18:30:32,223 | INFO     | nevents: 400
[2026-04-08 14:31:12] 2026-04-08 18:30:32,223 | INFO     | neventsw: 0
[2026-04-08 14:31:12] 2026-04-08 18:30:32,223 | INFO     | pid: 827181
[2026-04-08 14:31:12] 2026-04-08 18:30:32,223 | INFO     | pgrp: 827181
[2026-04-08 14:31:12] 2026-04-08 18:30:32,223 | INFO     | corecount: 8
[2026-04-08 14:31:12] 2026-04-08 18:30:32,223 | INFO     | event service: False
[2026-04-08 14:31:12] 2026-04-08 18:30:32,223 | INFO     | sizes: {0: 2279734, 1: 2280191, 2: 2281619, 13: 2281647, 28088: 2318478, 28089: 2318477, 28095: 2327659, 28096: 2327715, 28099: 2327909}
[2026-04-08 14:31:12] 2026-04-08 18:30:32,224 | INFO     | --------------------------------------------------
[2026-04-08 14:31:12] 2026-04-08 18:30:32,225 | INFO     | 
[2026-04-08 14:31:12] 2026-04-08 18:30:32,225 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-08 14:31:12] 2026-04-08 18:30:32,439 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,439 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,439 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-08 14:31:12] 2026-04-08 18:30:32,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,441 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-08 14:31:12] 2026-04-08 18:30:32,441 | INFO     | job 7073094823 has completed (purged errors)
[2026-04-08 14:31:12] 2026-04-08 18:30:32,441 | INFO     | overall cleanup function is called
[2026-04-08 14:31:12] 2026-04-08 18:30:33,457 | INFO     | --- collectZombieJob: --- 10, [827181]
[2026-04-08 14:31:12] 2026-04-08 18:30:33,457 | INFO     | zombie collector waiting for pid 827181
[2026-04-08 14:31:12] 2026-04-08 18:30:33,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-08 14:31:12] 2026-04-08 18:30:33,457 | INFO     | collected zombie processes
[2026-04-08 14:31:12] 2026-04-08 18:30:33,457 | INFO     | will attempt to kill all subprocesses of pid=827181
[2026-04-08 14:31:12] 2026-04-08 18:30:34,929 | INFO     | process IDs to be killed: [827181] (in reverse order)
[2026-04-08 14:31:12] 2026-04-08 18:30:35,117 | WARNING  | found no corresponding commands to process id(s)
[2026-04-08 14:31:12] 2026-04-08 18:30:35,117 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-08 14:31:12] 2026-04-08 18:30:35,166 | INFO     | did not find any defunct processes belonging to 827181
[2026-04-08 14:31:12] 2026-04-08 18:30:35,182 | INFO     | did not find any defunct processes belonging to 827181
[2026-04-08 14:31:12] 2026-04-08 18:30:35,182 | INFO     | Ready for new job
[2026-04-08 14:31:12] 2026-04-08 18:30:35,185 | INFO     | **************************************
[2026-04-08 14:31:12] 2026-04-08 18:30:35,186 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-08 14:31:12] 2026-04-08 18:30:35,186 | INFO     | **************************************
[2026-04-08 14:31:12] 2026-04-08 18:30:35,186 | INFO     | 
[2026-04-08 14:31:12] 2026-04-08 18:30:35,209 | INFO     | architecture information:
[2026-04-08 14:31:12] 2026-04-08 18:30:35,233 | INFO     | executing command: cat /etc/os-release
[2026-04-08 14:31:12] 2026-04-08 18:30:35,400 | INFO     | cat /etc/os-release:
[2026-04-08 14:31:12] NAME="CentOS Linux"
[2026-04-08 14:31:12] VERSION="7 (Core)"
[2026-04-08 14:31:12] ID="centos"
[2026-04-08 14:31:12] ID_LIKE="rhel fedora"
[2026-04-08 14:31:12] VERSION_ID="7"
[2026-04-08 14:31:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-08 14:31:12] ANSI_COLOR="0;31"
[2026-04-08 14:31:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-08 14:31:12] HOME_URL="https://www.centos.org/"
[2026-04-08 14:31:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-08 14:31:12] 
[2026-04-08 14:31:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-08 14:31:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-08 14:31:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-08 14:31:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-08 14:31:12] 
[2026-04-08 14:31:12] 2026-04-08 18:30:35,400 | INFO     | **************************************
[2026-04-08 14:31:12] 2026-04-08 18:30:35,904 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-08 14:31:12] 2026-04-08 18:30:35,955 | INFO     | sufficient remaining disk space (75414634496 B)
[2026-04-08 14:31:12] 2026-04-08 18:30:35,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-08 14:31:12] 2026-04-08 18:30:35,956 | INFO     | current server update state: UPDATING_FINAL
[2026-04-08 14:31:12] 2026-04-08 18:30:35,956 | INFO     | update_server=False
[2026-04-08 14:31:12] 2026-04-08 18:30:35,956 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-08 14:31:12] 2026-04-08 18:30:35,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-08 14:31:12] 2026-04-08 18:30:36,108 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-08 14:31:12] 2026-04-08 18:30:36,108 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-08 14:31:12] 2026-04-08 18:30:36,108 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-08 14:31:12] 2026-04-08 18:30:36,108 | INFO     | will abort loop
[2026-04-08 14:31:12] 2026-04-08 18:30:36,312 | INFO     | all payload control threads have been joined
[2026-04-08 14:31:12] 2026-04-08 18:30:36,408 | INFO     | all data control threads have been joined
[2026-04-08 14:31:12] 2026-04-08 18:30:36,561 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-08 14:31:12] 2026-04-08 18:30:36,963 | INFO     | [job] retrieve thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:36,971 | INFO     | [job] create_data_payload thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:37,090 | INFO     | [job] validate thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:37,096 | INFO     | [data] copytool_in thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:37,114 | INFO     | [job] job monitor thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:37,170 | INFO     | all job control threads have been joined
[2026-04-08 14:31:12] 2026-04-08 18:30:37,286 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:37,309 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-08 14:31:12] 2026-04-08 18:30:37,318 | INFO     | [payload] control thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:37,414 | INFO     | [data] control thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:37,911 | INFO     | [payload] failed_post thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:37,972 | INFO     | [payload] execute_payloads thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:38,023 | INFO     | [payload] validate_post thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:38,176 | INFO     | [job] control thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:38,223 | INFO     | [payload] validate_pre thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:38,336 | INFO     | [job] queue monitor thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:38,568 | INFO     | [data] copytool_out thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:39,967 | INFO     | [data] queue_monitor thread has finished
[2026-04-08 14:31:12] 2026-04-08 18:30:50,340 | INFO     | [monitor] cgroup control has ended
[2026-04-08 14:31:12] 2026-04-08 18:30:52,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140533676283712)>', '<ExcThread(monitor, started 140533192185600)>']
[2026-04-08 14:31:12] 2026-04-08 18:30:57,401 | INFO     | all workflow threads have been joined
[2026-04-08 14:31:12] 2026-04-08 18:30:57,401 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-08 14:31:12] 2026-04-08 18:30:57,401 | INFO     | traces error code: 0
[2026-04-08 14:31:12] 2026-04-08 18:30:57,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-08 14:31:12] 2026-04-08 18:31:09,959 | INFO     | PID=803659 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-08 14:31:12] 2026-04-08 18:31:09,959 | INFO     | .. there are 23 such processes running
[2026-04-08 14:31:12] 2026-04-08 18:31:10,000 | INFO     | found 0 job(s) in 20 queues
[2026-04-08 14:31:12] 2026-04-08 18:31:10,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-08 14:31:12] 2026-04-08 18:31:10,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-08 14:31:12] 2026-04-08 18:31:10,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-08 14:31:12] 2026-04-08 18:31:10,000 | INFO     | [monitor] control thread has ended
[2026-04-08 14:31:12] 2026-04-08 18:31:11,507 [wrapper] ==== pilot stdout END ====
[2026-04-08 14:31:12] 2026-04-08 18:31:11,565 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-08 14:31:12] 2026-04-08 18:31:11,587 [wrapper] pilotpid: 803659
[2026-04-08 14:31:12] 2026-04-08 18:31:11,620 [wrapper] Pilot exit status: 0
[2026-04-08 14:31:12] 2026-04-08 18:31:11,755 [wrapper] pandaids: 7073094823
[2026-04-08 14:31:12] 2026-04-08 18:31:12,041 [wrapper] cleanup supervisor_pilot 2273074 803660
[2026-04-08 14:31:12] 2026-04-08 18:31:12,048 [wrapper] Test setup, not cleaning
[2026-04-08 14:31:12] 2026-04-08 18:31:12,051 [wrapper] apfmon messages muted
[2026-04-08 14:31:12] 2026-04-08 18:31:12,088 [wrapper] ==== wrapper stdout END ====
[2026-04-08 14:31:12] 2026-04-08 18:31:12,109 [wrapper] ==== wrapper stderr END ====
[2026-04-08 14:31:12]  *** Error codes and diagnostics ***
[2026-04-08 14:31:12]     "exeErrorCode": 0,
[2026-04-08 14:31:12]     "pilotErrorCode": 0,
[2026-04-08 14:31:12]  *** Listing of results directory ***
[2026-04-08 14:31:12] total 428988
[2026-04-08 14:31:12] -rw-r--r--. 1 boincer umatlas    644034 Mar 31 04:26 pilot3.tar.gz
[2026-04-08 14:31:12] -rwx------. 1 boincer umatlas     36322 Mar 31 04:27 runpilot2-wrapper.sh
[2026-04-08 14:31:12] -rw-r--r--. 1 boincer umatlas      5118 Mar 31 04:28 queuedata.json
[2026-04-08 14:31:12] -rw-r--r--. 1 boincer umatlas       100 Apr  8 06:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-08 14:31:12] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  8 06:39 run_atlas
[2026-04-08 14:31:12] -rw-r--r--. 1 boincer umatlas       105 Apr  8 06:39 job.xml
[2026-04-08 14:31:12] -rw-r--r--. 2 boincer umatlas 225223226 Apr  8 06:40 EVNT.49263206._000621.pool.root.1
[2026-04-08 14:31:12] -rw-r--r--. 2 boincer umatlas     15845 Apr  8 06:40 start_atlas.sh
[2026-04-08 14:31:12] drwxrwx--x. 2 boincer umatlas      4096 Apr  8 06:40 shared
[2026-04-08 14:31:12] -rw-r--r--. 2 boincer umatlas    656749 Apr  8 06:40 input.tar.gz
[2026-04-08 14:31:12] -rw-r--r--. 1 boincer umatlas         0 Apr  8 06:40 boinc_lockfile
[2026-04-08 14:31:12] -rw-r--r--. 1 boincer umatlas      2575 Apr  8 06:40 pandaJob.out
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas        57 Apr  8 06:40 setup.sh.local
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas    996243 Apr  8 06:41 agis_schedconf.cvmfs.json
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas       442 Apr  8 06:41 workernode_map.json
[2026-04-08 14:31:12] drwx------. 5 boincer umatlas      4096 Apr  8 06:42 pilot3
[2026-04-08 14:31:12] -rw-r--r--. 1 boincer umatlas      6842 Apr  8 14:21 init_data.xml
[2026-04-08 14:31:12] -rw-r--r--. 1 boincer umatlas       531 Apr  8 14:28 boinc_task_state.xml
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas 204484898 Apr  8 14:28 HITS.49263208._014284.pool.root.1
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas      1042 Apr  8 14:30 memory_monitor_summary.json
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas   1511579 Apr  8 14:30 agis_ddmendpoints.agis.ALL.json
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas    501034 Apr  8 14:30 log.49263208._014284.job.log.tgz.1
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas      6413 Apr  8 14:30 heartbeat_new.json
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas      6304 Apr  8 14:30 heartbeat.json
[2026-04-08 14:31:12] -rw-r--r--. 1 boincer umatlas      8192 Apr  8 14:31 boinc_mmap_file
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas        95 Apr  8 14:31 pilot_heartbeat.json
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas       822 Apr  8 14:31 pilotlog.txt
[2026-04-08 14:31:12] -rw-r--r--. 1 boincer umatlas        28 Apr  8 14:31 wrapper_checkpoint.txt
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas   2252424 Apr  8 14:31 log.49263208._014284.job.log.1
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas       357 Apr  8 14:31 output.list
[2026-04-08 14:31:12] -rw-r--r--. 1 boincer umatlas       620 Apr  8 14:31 runtime_log
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas   2775040 Apr  8 14:31 result.tar.gz
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas       658 Apr  8 14:31 vgPLDmscjR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmISSKDmrq1eIn.diag
[2026-04-08 14:31:12] -rw-r--r--. 1 boincer umatlas      9347 Apr  8 14:31 runtime_log.err
[2026-04-08 14:31:12] -rw-r--r--. 1 boincer umatlas     21049 Apr  8 14:31 stderr.txt
[2026-04-08 14:31:12] HITS file was successfully produced:
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas 204484898 Apr  8 14:28 shared/HITS.pool.root.1
[2026-04-08 14:31:12]  *** Contents of shared directory: ***
[2026-04-08 14:31:12] total 423024
[2026-04-08 14:31:12] -rw-r--r--. 2 boincer umatlas 225223226 Apr  8 06:40 ATLAS.root_0
[2026-04-08 14:31:12] -rw-r--r--. 2 boincer umatlas     15845 Apr  8 06:40 start_atlas.sh
[2026-04-08 14:31:12] -rw-r--r--. 2 boincer umatlas    656749 Apr  8 06:40 input.tar.gz
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas 204484898 Apr  8 14:28 HITS.pool.root.1
[2026-04-08 14:31:12] -rw-------. 1 boincer umatlas   2775040 Apr  8 14:31 result.tar.gz
14:31:14 (789649): run_atlas exited; CPU time 50165.664318
14:31:14 (789649): called boinc_finish(0)

</stderr_txt>
]]>

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