Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:20:52 (2362681): wrapper (7.7.26015): starting
07:20:52 (2362681): wrapper: running run_atlas (--nthreads 8)
[2026-04-08 07:20:52] Arguments: --nthreads 8
[2026-04-08 07:20:52] Threads: 8
[2026-04-08 07:20:52] Checking for CVMFS
[2026-04-08 07:20:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-08 07:20:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-08 07:20:53] Running cvmfs_config stat atlas.cern.ch
[2026-04-08 07:20:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-08 07:20:55] 2.13.3.0 2282030 90160 538496 158218 3 270 23452259 32935937 25013 16776704 0 370590567 99.643 341910138 31098 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-08 07:20:55] CVMFS is ok
[2026-04-08 07:20:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-08 07:20:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-08 07:20:55] Further information can be found at the LHC@home message board.
[2026-04-08 07:20:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-08 07:20:55] Checking for apptainer binary...
[2026-04-08 07:20:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-08 07:20:55] Running /usr/bin/apptainer --version
[2026-04-08 07:20:55] apptainer version 1.4.5-2.el9
[2026-04-08 07:20:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-08 07:20:56] c6-12-27-1.aglt2.org
[2026-04-08 07:20:56] apptainer works
[2026-04-08 07:20:56] Set ATHENA_PROC_NUMBER=8
[2026-04-08 07:20:56] Set ATHENA_CORE_NUMBER=8
[2026-04-08 07:20:56] Starting ATLAS job with PandaID=7073094220
[2026-04-08 07:20:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-08 10:14:50]  *** The last 200 lines of the pilot log: ***
[2026-04-08 10:14:50] 2026-04-08 14:14:10,659 | INFO     | extracted standard info from prmon json
[2026-04-08 10:14:50] 2026-04-08 14:14:10,660 | INFO     | extracted standard memory fields from prmon json
[2026-04-08 10:14:50] 2026-04-08 14:14:10,660 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-08 10:14:50] 2026-04-08 14:14:10,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-08 10:14:50] 2026-04-08 14:14:10,664 | INFO     | fitting pss+swap vs Time
[2026-04-08 10:14:50] 2026-04-08 14:14:10,664 | INFO     | sum of square deviations: 1470086085.994046
[2026-04-08 10:14:50] 2026-04-08 14:14:10,665 | INFO     | sum of deviations: -11288575088.529768
[2026-04-08 10:14:50] 2026-04-08 14:14:10,666 | INFO     | mean x (centered): 0.0
[2026-04-08 10:14:50] 2026-04-08 14:14:10,666 | INFO     | mean y: 2549901.220238095
[2026-04-08 10:14:50] 2026-04-08 14:14:10,666 | INFO     | intersect: 2549901.220238095
[2026-04-08 10:14:50] 2026-04-08 14:14:10,666 | INFO     | chi2: 3.264161237956655
[2026-04-08 10:14:50] 2026-04-08 14:14:10,666 | INFO     | sum of square deviations: 1342691550.6871185
[2026-04-08 10:14:50] 2026-04-08 14:14:10,667 | INFO     | sum of deviations: -187771662.6318894
[2026-04-08 10:14:50] 2026-04-08 14:14:10,668 | INFO     | mean x (centered): 0.0
[2026-04-08 10:14:50] 2026-04-08 14:14:10,668 | INFO     | mean y: 2562881.527607362
[2026-04-08 10:14:50] 2026-04-08 14:14:10,668 | INFO     | intersect: 2562881.527607362
[2026-04-08 10:14:50] 2026-04-08 14:14:10,668 | INFO     | chi2: 2.610541311986874
[2026-04-08 10:14:50] 2026-04-08 14:14:10,668 | INFO     | current chi2=2.610541311986874 (change=20.02413111121137 %)
[2026-04-08 10:14:50] 2026-04-08 14:14:10,668 | INFO     | right removable region: 162
[2026-04-08 10:14:50] 2026-04-08 14:14:10,669 | INFO     | sum of square deviations: 1342666540.6871185
[2026-04-08 10:14:50] 2026-04-08 14:14:10,670 | INFO     | sum of deviations: -47220852327.460106
[2026-04-08 10:14:50] 2026-04-08 14:14:10,670 | INFO     | mean x (centered): 0.0
[2026-04-08 10:14:50] 2026-04-08 14:14:10,670 | INFO     | mean y: 2592536.8404907975
[2026-04-08 10:14:50] 2026-04-08 14:14:10,670 | INFO     | intersect: 2592536.8404907975
[2026-04-08 10:14:50] 2026-04-08 14:14:10,670 | INFO     | chi2: 1.129945874936808
[2026-04-08 10:14:50] 2026-04-08 14:14:10,670 | INFO     | current chi2=1.129945874936808 (change=65.38327023195252 %)
[2026-04-08 10:14:50] 2026-04-08 14:14:10,671 | INFO     | sum of square deviations: 1222838353.3734183
[2026-04-08 10:14:50] 2026-04-08 14:14:10,672 | INFO     | sum of deviations: -52190681040.2405
[2026-04-08 10:14:50] 2026-04-08 14:14:10,672 | INFO     | mean x (centered): 0.0
[2026-04-08 10:14:50] 2026-04-08 14:14:10,672 | INFO     | mean y: 2598792.481012658
[2026-04-08 10:14:50] 2026-04-08 14:14:10,672 | INFO     | intersect: 2598792.481012658
[2026-04-08 10:14:50] 2026-04-08 14:14:10,672 | INFO     | chi2: 1.0261750652840957
[2026-04-08 10:14:50] 2026-04-08 14:14:10,672 | INFO     | current chi2=1.0261750652840957 (change=9.183697374753963 %)
[2026-04-08 10:14:50] 2026-04-08 14:14:10,673 | INFO     | left removable region: 10
[2026-04-08 10:14:50] 2026-04-08 14:14:10,673 | INFO     | sum of square deviations: 1088742571.4736817
[2026-04-08 10:14:50] 2026-04-08 14:14:10,674 | INFO     | sum of deviations: -40284819628.289474
[2026-04-08 10:14:50] 2026-04-08 14:14:10,674 | INFO     | mean x (centered): 0.0
[2026-04-08 10:14:50] 2026-04-08 14:14:10,674 | INFO     | mean y: 2614603.0197368423
[2026-04-08 10:14:50] 2026-04-08 14:14:10,674 | INFO     | intersect: 2614603.0197368423
[2026-04-08 10:14:50] 2026-04-08 14:14:10,675 | INFO     | chi2: 0.3310713592122104
[2026-04-08 10:14:50] 2026-04-08 14:14:10,675 | INFO     | current memory leak: -37.00 B/s (using 152 data points, chi2=0.33)
[2026-04-08 10:14:50] 2026-04-08 14:14:10,675 | INFO     | could have reported an average CPU frequency of 2574 MHz (9 samples)
[2026-04-08 10:14:50] 2026-04-08 14:14:10,675 | INFO     | ..............................
[2026-04-08 10:14:50] 2026-04-08 14:14:10,676 | INFO     | . Timing measurements:
[2026-04-08 10:14:50] 2026-04-08 14:14:10,676 | INFO     | . get job = 0 s
[2026-04-08 10:14:50] 2026-04-08 14:14:10,676 | INFO     | . initial setup = 33 s
[2026-04-08 10:14:50] 2026-04-08 14:14:10,676 | INFO     | . payload setup = 64 s
[2026-04-08 10:14:50] 2026-04-08 14:14:10,676 | INFO     | . stage-in = 0 s
[2026-04-08 10:14:50] 2026-04-08 14:14:10,676 | INFO     | . payload execution = 10218 s
[2026-04-08 10:14:50] 2026-04-08 14:14:10,676 | INFO     | . stage-out = 0 s
[2026-04-08 10:14:50] 2026-04-08 14:14:10,676 | INFO     | . log creation = 0 s
[2026-04-08 10:14:50] 2026-04-08 14:14:10,676 | INFO     | ..............................
[2026-04-08 10:14:50] 2026-04-08 14:14:10,774 | INFO     | 
[2026-04-08 10:14:50] 2026-04-08 14:14:10,775 | INFO     | job summary report
[2026-04-08 10:14:50] 2026-04-08 14:14:10,775 | INFO     | --------------------------------------------------
[2026-04-08 10:14:50] 2026-04-08 14:14:10,775 | INFO     | PanDA job id: 7073094220
[2026-04-08 10:14:50] 2026-04-08 14:14:10,775 | INFO     | task id: 49263208
[2026-04-08 10:14:50] 2026-04-08 14:14:10,775 | INFO     | errors: (none)
[2026-04-08 10:14:50] 2026-04-08 14:14:10,775 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-08 10:14:50] 2026-04-08 14:14:10,777 | INFO     | pilot state: finished 
[2026-04-08 10:14:50] 2026-04-08 14:14:10,777 | INFO     | transexitcode: 0
[2026-04-08 10:14:50] 2026-04-08 14:14:10,777 | INFO     | exeerrorcode: 0
[2026-04-08 10:14:50] 2026-04-08 14:14:10,778 | INFO     | exeerrordiag: 
[2026-04-08 10:14:50] 2026-04-08 14:14:10,778 | INFO     | exitcode: 0
[2026-04-08 10:14:50] 2026-04-08 14:14:10,778 | INFO     | exitmsg: OK
[2026-04-08 10:14:50] 2026-04-08 14:14:10,778 | INFO     | cpuconsumptiontime: 46170 s
[2026-04-08 10:14:50] 2026-04-08 14:14:10,778 | INFO     | nevents: 400
[2026-04-08 10:14:50] 2026-04-08 14:14:10,778 | INFO     | neventsw: 0
[2026-04-08 10:14:50] 2026-04-08 14:14:10,778 | INFO     | pid: 2375955
[2026-04-08 10:14:50] 2026-04-08 14:14:10,778 | INFO     | pgrp: 2375955
[2026-04-08 10:14:50] 2026-04-08 14:14:10,778 | INFO     | corecount: 8
[2026-04-08 10:14:50] 2026-04-08 14:14:10,778 | INFO     | event service: False
[2026-04-08 10:14:50] 2026-04-08 14:14:10,778 | INFO     | sizes: {0: 2279133, 1: 2279818, 2: 2279846, 3: 2281647, 14: 2281675, 10286: 2310513, 10288: 2319567, 10290: 2319769}
[2026-04-08 10:14:50] 2026-04-08 14:14:10,778 | INFO     | --------------------------------------------------
[2026-04-08 10:14:50] 2026-04-08 14:14:10,778 | INFO     | 
[2026-04-08 10:14:50] 2026-04-08 14:14:10,779 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-04-08 10:14:50] 2026-04-08 14:14:10,802 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,803 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,803 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,803 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,803 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,803 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,804 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-08 10:14:50] 2026-04-08 14:14:10,805 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,805 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-08 10:14:50] 2026-04-08 14:14:10,805 | INFO     | job 7073094220 has completed (purged errors)
[2026-04-08 10:14:50] 2026-04-08 14:14:10,805 | INFO     | overall cleanup function is called
[2026-04-08 10:14:50] 2026-04-08 14:14:11,812 | INFO     | --- collectZombieJob: --- 10, [2375955]
[2026-04-08 10:14:50] 2026-04-08 14:14:11,812 | INFO     | zombie collector waiting for pid 2375955
[2026-04-08 10:14:50] 2026-04-08 14:14:11,813 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-08 10:14:50] 2026-04-08 14:14:11,813 | INFO     | collected zombie processes
[2026-04-08 10:14:50] 2026-04-08 14:14:11,813 | INFO     | will attempt to kill all subprocesses of pid=2375955
[2026-04-08 10:14:50] 2026-04-08 14:14:12,219 | INFO     | process IDs to be killed: [2375955] (in reverse order)
[2026-04-08 10:14:50] 2026-04-08 14:14:12,367 | WARNING  | found no corresponding commands to process id(s)
[2026-04-08 10:14:50] 2026-04-08 14:14:12,367 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-08 10:14:50] 2026-04-08 14:14:12,385 | INFO     | did not find any defunct processes belonging to 2375955
[2026-04-08 10:14:50] 2026-04-08 14:14:12,404 | INFO     | did not find any defunct processes belonging to 2375955
[2026-04-08 10:14:50] 2026-04-08 14:14:12,405 | INFO     | Ready for new job
[2026-04-08 10:14:50] 2026-04-08 14:14:12,406 | INFO     | **************************************
[2026-04-08 10:14:50] 2026-04-08 14:14:12,407 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-08 10:14:50] 2026-04-08 14:14:12,407 | INFO     | **************************************
[2026-04-08 10:14:50] 2026-04-08 14:14:12,407 | INFO     | 
[2026-04-08 10:14:50] 2026-04-08 14:14:12,413 | INFO     | architecture information:
[2026-04-08 10:14:50] 2026-04-08 14:14:12,414 | INFO     | executing command: cat /etc/os-release
[2026-04-08 10:14:50] 2026-04-08 14:14:12,433 | INFO     | cat /etc/os-release:
[2026-04-08 10:14:50] NAME="CentOS Linux"
[2026-04-08 10:14:50] VERSION="7 (Core)"
[2026-04-08 10:14:50] ID="centos"
[2026-04-08 10:14:50] ID_LIKE="rhel fedora"
[2026-04-08 10:14:50] VERSION_ID="7"
[2026-04-08 10:14:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-08 10:14:50] ANSI_COLOR="0;31"
[2026-04-08 10:14:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-08 10:14:50] HOME_URL="https://www.centos.org/"
[2026-04-08 10:14:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-08 10:14:50] 
[2026-04-08 10:14:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-08 10:14:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-08 10:14:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-08 10:14:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-08 10:14:50] 
[2026-04-08 10:14:50] 2026-04-08 14:14:12,434 | INFO     | **************************************
[2026-04-08 10:14:50] 2026-04-08 14:14:12,936 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-04-08 10:14:50] 2026-04-08 14:14:12,958 | INFO     | sufficient remaining disk space (96521420800 B)
[2026-04-08 10:14:50] 2026-04-08 14:14:12,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-08 10:14:50] 2026-04-08 14:14:12,959 | INFO     | current server update state: UPDATING_FINAL
[2026-04-08 10:14:50] 2026-04-08 14:14:12,959 | INFO     | update_server=False
[2026-04-08 10:14:50] 2026-04-08 14:14:12,959 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-08 10:14:50] 2026-04-08 14:14:13,065 | INFO     | all job control threads have been joined
[2026-04-08 10:14:50] 2026-04-08 14:14:13,286 | INFO     | all payload control threads have been joined
[2026-04-08 10:14:50] 2026-04-08 14:14:13,674 | INFO     | all data control threads have been joined
[2026-04-08 10:14:50] 2026-04-08 14:14:13,965 | INFO     | [job] retrieve thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:14,074 | INFO     | [job] control thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:14,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-08 10:14:50] 2026-04-08 14:14:14,276 | INFO     | [payload] execute_payloads thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:14,292 | INFO     | [payload] control thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:14,378 | INFO     | [payload] failed_post thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:14,427 | WARNING  | process 2375955 can no longer be monitored (due to stat problems) - aborting
[2026-04-08 10:14:50] 2026-04-08 14:14:14,447 | INFO     | [data] copytool_in thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:14,679 | INFO     | [data] control thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:14,709 | INFO     | [job] create_data_payload thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:14,765 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-08 10:14:50] 2026-04-08 14:14:14,779 | INFO     | [payload] validate_pre thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:14,828 | INFO     | using path: /tmp/boinchome/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-04-08 10:14:50] 2026-04-08 14:14:14,829 | INFO     | using path: /tmp/boinchome/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-04-08 10:14:50] 2026-04-08 14:14:14,829 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-08 10:14:50] 2026-04-08 14:14:14,829 | WARNING  | maxPSS not found in memory monitor output
[2026-04-08 10:14:50] 2026-04-08 14:14:14,830 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/5/PanDA_Pilot-7073094220/payload.stdout) since it has not been created yet
[2026-04-08 10:14:50] 2026-04-08 14:14:14,830 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-04-08 10:14:50] 2026-04-08 14:14:14,852 | INFO     | sufficient remaining disk space (96521420800 B)
[2026-04-08 10:14:50] 2026-04-08 14:14:14,852 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-08 10:14:50] 2026-04-08 14:14:14,852 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/5/PanDA_Pilot-7073094220/HITS.49263208._014009.pool.root.1 since it does not exist
[2026-04-08 10:14:50] 2026-04-08 14:14:14,938 | INFO     | [job] validate thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:14,988 | INFO     | [payload] validate_post thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:15,295 | INFO     | number of running child processes to parent process 2375955: 1
[2026-04-08 10:14:50] 2026-04-08 14:14:15,295 | INFO     | maximum number of monitored processes: 6
[2026-04-08 10:14:50] 2026-04-08 14:14:15,295 | INFO     | aborting job monitoring since job object (job id=7073094220) has expired
[2026-04-08 10:14:50] 2026-04-08 14:14:15,296 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-08 10:14:50] 2026-04-08 14:14:15,296 | INFO     | will abort loop
[2026-04-08 10:14:50] 2026-04-08 14:14:15,787 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-08 10:14:50] 2026-04-08 14:14:16,171 | INFO     | [data] copytool_out thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:16,300 | INFO     | [job] job monitor thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:16,792 | INFO     | [job] queue monitor thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:18,771 | INFO     | [data] queue_monitor thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:23,097 | INFO     | job.realtimelogging is not enabled
[2026-04-08 10:14:50] 2026-04-08 14:14:24,102 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-08 10:14:50] 2026-04-08 14:14:42,626 | INFO     | PID=2368258 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-08 10:14:50] 2026-04-08 14:14:42,626 | INFO     | .. there are 20 such processes running
[2026-04-08 10:14:50] 2026-04-08 14:14:42,626 | INFO     | found 0 job(s) in 20 queues
[2026-04-08 10:14:50] 2026-04-08 14:14:42,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-08 10:14:50] 2026-04-08 14:14:42,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-08 10:14:50] 2026-04-08 14:14:44,092 | INFO     | [monitor] cgroup control has ended
[2026-04-08 10:14:50] 2026-04-08 14:14:44,581 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139876448159552)>', '<ExcThread(monitor, started 139875735037696)>']
[2026-04-08 10:14:50] 2026-04-08 14:14:44,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-08 10:14:50] 2026-04-08 14:14:44,637 | INFO     | [monitor] control thread has ended
[2026-04-08 10:14:50] 2026-04-08 14:14:49,607 | INFO     | all workflow threads have been joined
[2026-04-08 10:14:50] 2026-04-08 14:14:49,607 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-08 10:14:50] 2026-04-08 14:14:49,608 | INFO     | traces error code: 0
[2026-04-08 10:14:50] 2026-04-08 14:14:49,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-08 10:14:50] 2026-04-08 14:14:49,849 [wrapper] ==== pilot stdout END ====
[2026-04-08 10:14:50] 2026-04-08 14:14:49,854 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-08 10:14:50] 2026-04-08 14:14:49,858 [wrapper] pilotpid: 2368258
[2026-04-08 10:14:50] 2026-04-08 14:14:49,862 [wrapper] Pilot exit status: 0
[2026-04-08 10:14:50] 2026-04-08 14:14:49,877 [wrapper] pandaids: 7073094220
[2026-04-08 10:14:50] 2026-04-08 14:14:49,957 [wrapper] cleanup supervisor_pilot 2887173 2368259
[2026-04-08 10:14:50] 2026-04-08 14:14:49,960 [wrapper] Test setup, not cleaning
[2026-04-08 10:14:50] 2026-04-08 14:14:49,962 [wrapper] apfmon messages muted
[2026-04-08 10:14:50] 2026-04-08 14:14:49,964 [wrapper] ==== wrapper stdout END ====
[2026-04-08 10:14:50] 2026-04-08 14:14:49,967 [wrapper] ==== wrapper stderr END ====
[2026-04-08 10:14:50]  *** Error codes and diagnostics ***
[2026-04-08 10:14:50]     "exeErrorCode": 0,
[2026-04-08 10:14:50]     "pilotErrorCode": 0,
[2026-04-08 10:14:50]  *** Listing of results directory ***
[2026-04-08 10:14:50] total 425060
[2026-04-08 10:14:50] -rw-r--r--. 1 boincer umatlas    644034 Mar 31 04:26 pilot3.tar.gz
[2026-04-08 10:14:50] -rwx------. 1 boincer umatlas     36322 Mar 31 04:27 runpilot2-wrapper.sh
[2026-04-08 10:14:50] -rw-r--r--. 1 boincer umatlas      5118 Mar 31 04:28 queuedata.json
[2026-04-08 10:14:50] -rw-r--r--. 1 boincer umatlas       100 Apr  8 07:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-08 10:14:50] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  8 07:20 run_atlas
[2026-04-08 10:14:50] -rw-r--r--. 1 boincer umatlas       105 Apr  8 07:20 job.xml
[2026-04-08 10:14:50] -rw-r--r--. 2 boincer umatlas 224608626 Apr  8 07:20 EVNT.49263206._000610.pool.root.1
[2026-04-08 10:14:50] -rw-r--r--. 2 boincer umatlas     15845 Apr  8 07:20 start_atlas.sh
[2026-04-08 10:14:50] drwxrwx--x. 2 boincer umatlas      4096 Apr  8 07:20 shared
[2026-04-08 10:14:50] -rw-r--r--. 2 boincer umatlas    656745 Apr  8 07:20 input.tar.gz
[2026-04-08 10:14:50] -rw-r--r--. 1 boincer umatlas         0 Apr  8 07:20 boinc_lockfile
[2026-04-08 10:14:50] -rw-r--r--. 1 boincer umatlas      2575 Apr  8 07:20 pandaJob.out
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas        57 Apr  8 07:20 setup.sh.local
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas    996590 Apr  8 07:21 agis_schedconf.cvmfs.json
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas   1511579 Apr  8 07:21 agis_ddmendpoints.agis.ALL.json
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas       444 Apr  8 07:22 workernode_map.json
[2026-04-08 10:14:50] drwx------. 5 boincer umatlas      4096 Apr  8 07:22 pilot3
[2026-04-08 10:14:50] -rw-r--r--. 1 boincer umatlas      6880 Apr  8 10:12 init_data.xml
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas 204088042 Apr  8 10:13 HITS.49263208._014009.pool.root.1
[2026-04-08 10:14:50] -rw-r--r--. 1 boincer umatlas       530 Apr  8 10:13 boinc_task_state.xml
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas      1052 Apr  8 10:14 memory_monitor_summary.json
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas        95 Apr  8 10:14 pilot_heartbeat.json
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas    351352 Apr  8 10:14 log.49263208._014009.job.log.tgz.1
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas      6422 Apr  8 10:14 heartbeat_new.json
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas      6313 Apr  8 10:14 heartbeat.json
[2026-04-08 10:14:50] -rw-r--r--. 1 boincer umatlas      8192 Apr  8 10:14 boinc_mmap_file
[2026-04-08 10:14:50] -rw-r--r--. 1 boincer umatlas        27 Apr  8 10:14 wrapper_checkpoint.txt
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas      6376 Apr  8 10:14 pilotlog.txt
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas    899555 Apr  8 10:14 log.49263208._014009.job.log.1
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas       357 Apr  8 10:14 output.list
[2026-04-08 10:14:50] -rw-r--r--. 1 boincer umatlas       620 Apr  8 10:14 runtime_log
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas   1269760 Apr  8 10:14 result.tar.gz
[2026-04-08 10:14:50] -rw-r--r--. 1 boincer umatlas      9352 Apr  8 10:14 runtime_log.err
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas       657 Apr  8 10:14 7qzLDm8cjR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmBbQKDmp4l3Om.diag
[2026-04-08 10:14:50] -rw-r--r--. 1 boincer umatlas     21409 Apr  8 10:14 stderr.txt
[2026-04-08 10:14:50] HITS file was successfully produced:
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas 204088042 Apr  8 10:13 shared/HITS.pool.root.1
[2026-04-08 10:14:50]  *** Contents of shared directory: ***
[2026-04-08 10:14:50] total 420560
[2026-04-08 10:14:50] -rw-r--r--. 2 boincer umatlas 224608626 Apr  8 07:20 ATLAS.root_0
[2026-04-08 10:14:50] -rw-r--r--. 2 boincer umatlas     15845 Apr  8 07:20 start_atlas.sh
[2026-04-08 10:14:50] -rw-r--r--. 2 boincer umatlas    656745 Apr  8 07:20 input.tar.gz
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas 204088042 Apr  8 10:13 HITS.pool.root.1
[2026-04-08 10:14:50] -rw-------. 1 boincer umatlas   1269760 Apr  8 10:14 result.tar.gz
10:14:51 (2362681): run_atlas exited; CPU time 46623.815085
10:14:51 (2362681): called boinc_finish(0)

</stderr_txt>
]]>

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