Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:39:20 (3847663): wrapper (7.7.26015): starting
05:39:20 (3847663): wrapper: running run_atlas (--nthreads 12)
[2026-04-08 05:39:20] Arguments: --nthreads 12
[2026-04-08 05:39:20] Threads: 12
[2026-04-08 05:39:20] Checking for CVMFS
[2026-04-08 05:39:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-08 05:39:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-08 05:39:20] Running cvmfs_config stat atlas.cern.ch
[2026-04-08 05:39:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-08 05:39:21] 2.13.3.0 9294 221355 193228 158214 3 322 28354910 32935937 16868 16776704 0 929707542 99.698 713247236 32369 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-08 05:39:21] CVMFS is ok
[2026-04-08 05:39:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-08 05:39:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-08 05:39:21] Further information can be found at the LHC@home message board.
[2026-04-08 05:39:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-08 05:39:21] Checking for apptainer binary...
[2026-04-08 05:39:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-08 05:39:21] Running /usr/bin/apptainer --version
[2026-04-08 05:39:21] apptainer version 1.4.5-2.el9
[2026-04-08 05:39:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-08 05:39:22] c-4-38.aglt2.org
[2026-04-08 05:39:22] apptainer works
[2026-04-08 05:39:22] Set ATHENA_PROC_NUMBER=12
[2026-04-08 05:39:22] Set ATHENA_CORE_NUMBER=12
[2026-04-08 05:39:22] Starting ATLAS job with PandaID=7082811840
[2026-04-08 05:39:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-08 11:55:57]  *** The last 200 lines of the pilot log: ***
[2026-04-08 11:55:57] 2026-04-08 15:55:13,970 | INFO     | .. there are 27 such processes running
[2026-04-08 11:55:57] 2026-04-08 15:55:14,656 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-08 11:55:57] 2026-04-08 15:55:15,211 | INFO     | job 7082811840 has state=finished
[2026-04-08 11:55:57] 2026-04-08 15:55:15,211 | INFO     | preparing for final server update for job 7082811840 in state='finished'
[2026-04-08 11:55:57] 2026-04-08 15:55:15,211 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7082811840/jobReport.json
[2026-04-08 11:55:57] 2026-04-08 15:55:15,214 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-08 11:55:57] 2026-04-08 15:55:15,214 | INFO     | this job has now completed (state=finished)
[2026-04-08 11:55:57] 2026-04-08 15:55:15,214 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-08 11:55:57] 2026-04-08 15:55:15,214 | INFO     | log transfer has been attempted: DONE
[2026-04-08 11:55:57] 2026-04-08 15:55:15,223 | INFO     | job 7082811840 has finished - writing final server update
[2026-04-08 11:55:57] 2026-04-08 15:55:15,223 | INFO     | total number of processed events: 400 (read)
[2026-04-08 11:55:57] 2026-04-08 15:55:15,238 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7082811840/memory_monitor_summary.json (trf name=prmon)
[2026-04-08 11:55:57] 2026-04-08 15:55:15,239 | INFO     | extracted standard info from prmon json
[2026-04-08 11:55:57] 2026-04-08 15:55:15,239 | INFO     | extracted standard memory fields from prmon json
[2026-04-08 11:55:57] 2026-04-08 15:55:15,239 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-08 11:55:57] 2026-04-08 15:55:15,240 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-08 11:55:57] 2026-04-08 15:55:15,259 | INFO     | fitting pss+swap vs Time
[2026-04-08 11:55:57] 2026-04-08 15:55:15,260 | INFO     | sum of square deviations: 15580123366.243916
[2026-04-08 11:55:57] 2026-04-08 15:55:15,263 | INFO     | sum of deviations: 17570565715.9919
[2026-04-08 11:55:57] 2026-04-08 15:55:15,263 | INFO     | mean x (centered): 0.0
[2026-04-08 11:55:57] 2026-04-08 15:55:15,264 | INFO     | mean y: 2683893.0054200543
[2026-04-08 11:55:57] 2026-04-08 15:55:15,264 | INFO     | intersect: 2683893.0054200543
[2026-04-08 11:55:57] 2026-04-08 15:55:15,264 | INFO     | chi2: 3.186348622256463
[2026-04-08 11:55:57] 2026-04-08 15:55:15,265 | INFO     | sum of square deviations: 14955360937.989073
[2026-04-08 11:55:57] 2026-04-08 15:55:15,268 | INFO     | sum of deviations: 42353273532.956055
[2026-04-08 11:55:57] 2026-04-08 15:55:15,269 | INFO     | mean x (centered): 0.0
[2026-04-08 11:55:57] 2026-04-08 15:55:15,269 | INFO     | mean y: 2689875.021978022
[2026-04-08 11:55:57] 2026-04-08 15:55:15,269 | INFO     | intersect: 2689875.021978022
[2026-04-08 11:55:57] 2026-04-08 15:55:15,269 | INFO     | chi2: 2.4928727229895498
[2026-04-08 11:55:57] 2026-04-08 15:55:15,270 | INFO     | current chi2=2.4928727229895498 (change=21.763968149091525 %)
[2026-04-08 11:55:57] 2026-04-08 15:55:15,270 | INFO     | right removable region: 363
[2026-04-08 11:55:57] 2026-04-08 15:55:15,270 | INFO     | sum of square deviations: 14955292129.956085
[2026-04-08 11:55:57] 2026-04-08 15:55:15,274 | INFO     | sum of deviations: -68531022684.49454
[2026-04-08 11:55:57] 2026-04-08 15:55:15,274 | INFO     | mean x (centered): 0.0
[2026-04-08 11:55:57] 2026-04-08 15:55:15,274 | INFO     | mean y: 2704827.8736263737
[2026-04-08 11:55:57] 2026-04-08 15:55:15,274 | INFO     | intersect: 2704827.8736263737
[2026-04-08 11:55:57] 2026-04-08 15:55:15,275 | INFO     | chi2: 1.0667317630825237
[2026-04-08 11:55:57] 2026-04-08 15:55:15,275 | INFO     | current chi2=1.0667317630825237 (change=66.52181259666744 %)
[2026-04-08 11:55:57] 2026-04-08 15:55:15,276 | INFO     | sum of square deviations: 14347391443.632252
[2026-04-08 11:55:57] 2026-04-08 15:55:15,279 | INFO     | sum of deviations: -78125013413.08911
[2026-04-08 11:55:57] 2026-04-08 15:55:15,279 | INFO     | mean x (centered): 0.0
[2026-04-08 11:55:57] 2026-04-08 15:55:15,279 | INFO     | mean y: 2707226.398328691
[2026-04-08 11:55:57] 2026-04-08 15:55:15,280 | INFO     | intersect: 2707226.398328691
[2026-04-08 11:55:57] 2026-04-08 15:55:15,280 | INFO     | chi2: 1.027977931968446
[2026-04-08 11:55:57] 2026-04-08 15:55:15,280 | INFO     | current chi2=1.027977931968446 (change=3.632949955675012 %)
[2026-04-08 11:55:57] 2026-04-08 15:55:15,280 | INFO     | left removable region: 10
[2026-04-08 11:55:57] 2026-04-08 15:55:15,281 | INFO     | sum of square deviations: 13640024096.090675
[2026-04-08 11:55:57] 2026-04-08 15:55:15,284 | INFO     | sum of deviations: -52620255055.30309
[2026-04-08 11:55:57] 2026-04-08 15:55:15,285 | INFO     | mean x (centered): 0.0
[2026-04-08 11:55:57] 2026-04-08 15:55:15,285 | INFO     | mean y: 2713735.507082153
[2026-04-08 11:55:57] 2026-04-08 15:55:15,285 | INFO     | intersect: 2713735.507082153
[2026-04-08 11:55:57] 2026-04-08 15:55:15,285 | INFO     | chi2: 0.3175555532568339
[2026-04-08 11:55:57] 2026-04-08 15:55:15,286 | INFO     | current memory leak: -3.86 B/s (using 353 data points, chi2=0.32)
[2026-04-08 11:55:57] 2026-04-08 15:55:15,286 | INFO     | could have reported an average CPU frequency of 2600 MHz (16 samples)
[2026-04-08 11:55:57] 2026-04-08 15:55:15,286 | INFO     | ..............................
[2026-04-08 11:55:57] 2026-04-08 15:55:15,287 | INFO     | . Timing measurements:
[2026-04-08 11:55:57] 2026-04-08 15:55:15,287 | INFO     | . get job = 0 s
[2026-04-08 11:55:57] 2026-04-08 15:55:15,287 | INFO     | . initial setup = 14 s
[2026-04-08 11:55:57] 2026-04-08 15:55:15,287 | INFO     | . payload setup = 28 s
[2026-04-08 11:55:57] 2026-04-08 15:55:15,287 | INFO     | . stage-in = 0 s
[2026-04-08 11:55:57] 2026-04-08 15:55:15,287 | INFO     | . payload execution = 22464 s
[2026-04-08 11:55:57] 2026-04-08 15:55:15,287 | INFO     | . stage-out = 4 s
[2026-04-08 11:55:57] 2026-04-08 15:55:15,287 | INFO     | . log creation = 0 s
[2026-04-08 11:55:57] 2026-04-08 15:55:15,287 | INFO     | ..............................
[2026-04-08 11:55:57] 2026-04-08 15:55:15,458 | INFO     | 
[2026-04-08 11:55:57] 2026-04-08 15:55:15,459 | INFO     | job summary report
[2026-04-08 11:55:57] 2026-04-08 15:55:15,459 | INFO     | --------------------------------------------------
[2026-04-08 11:55:57] 2026-04-08 15:55:15,459 | INFO     | PanDA job id: 7082811840
[2026-04-08 11:55:57] 2026-04-08 15:55:15,459 | INFO     | task id: 49514757
[2026-04-08 11:55:57] 2026-04-08 15:55:15,459 | INFO     | errors: (none)
[2026-04-08 11:55:57] 2026-04-08 15:55:15,460 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-08 11:55:57] 2026-04-08 15:55:15,460 | INFO     | pilot state: finished 
[2026-04-08 11:55:57] 2026-04-08 15:55:15,460 | INFO     | transexitcode: 0
[2026-04-08 11:55:57] 2026-04-08 15:55:15,460 | INFO     | exeerrorcode: 0
[2026-04-08 11:55:57] 2026-04-08 15:55:15,460 | INFO     | exeerrordiag: 
[2026-04-08 11:55:57] 2026-04-08 15:55:15,460 | INFO     | exitcode: 0
[2026-04-08 11:55:57] 2026-04-08 15:55:15,460 | INFO     | exitmsg: OK
[2026-04-08 11:55:57] 2026-04-08 15:55:15,460 | INFO     | cpuconsumptiontime: 48530 s
[2026-04-08 11:55:57] 2026-04-08 15:55:15,460 | INFO     | nevents: 400
[2026-04-08 11:55:57] 2026-04-08 15:55:15,461 | INFO     | neventsw: 0
[2026-04-08 11:55:57] 2026-04-08 15:55:15,461 | INFO     | pid: 3875944
[2026-04-08 11:55:57] 2026-04-08 15:55:15,461 | INFO     | pgrp: 3875944
[2026-04-08 11:55:57] 2026-04-08 15:55:15,461 | INFO     | corecount: 12
[2026-04-08 11:55:57] 2026-04-08 15:55:15,461 | INFO     | event service: False
[2026-04-08 11:55:57] 2026-04-08 15:55:15,461 | INFO     | sizes: {0: 2279572, 1: 2281401, 22496: 2315809, 22497: 2315808, 22501: 2324862, 22505: 2325240}
[2026-04-08 11:55:57] 2026-04-08 15:55:15,461 | INFO     | --------------------------------------------------
[2026-04-08 11:55:57] 2026-04-08 15:55:15,461 | INFO     | 
[2026-04-08 11:55:57] 2026-04-08 15:55:15,461 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-08 11:55:57] 2026-04-08 15:55:15,576 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,576 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,576 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,576 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,577 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,577 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,577 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,577 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,577 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,577 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,577 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,578 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,578 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,578 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-08 11:55:57] 2026-04-08 15:55:15,578 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,578 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-08 11:55:57] 2026-04-08 15:55:15,579 | INFO     | job 7082811840 has completed (purged errors)
[2026-04-08 11:55:57] 2026-04-08 15:55:15,597 | INFO     | overall cleanup function is called
[2026-04-08 11:55:57] 2026-04-08 15:55:16,607 | INFO     | --- collectZombieJob: --- 10, [3875944]
[2026-04-08 11:55:57] 2026-04-08 15:55:16,607 | INFO     | zombie collector waiting for pid 3875944
[2026-04-08 11:55:57] 2026-04-08 15:55:16,607 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-08 11:55:57] 2026-04-08 15:55:16,607 | INFO     | collected zombie processes
[2026-04-08 11:55:57] 2026-04-08 15:55:16,607 | INFO     | will attempt to kill all subprocesses of pid=3875944
[2026-04-08 11:55:57] 2026-04-08 15:55:17,308 | INFO     | process IDs to be killed: [3875944] (in reverse order)
[2026-04-08 11:55:57] 2026-04-08 15:55:17,475 | WARNING  | found no corresponding commands to process id(s)
[2026-04-08 11:55:57] 2026-04-08 15:55:17,476 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-08 11:55:57] 2026-04-08 15:55:17,493 | INFO     | did not find any defunct processes belonging to 3875944
[2026-04-08 11:55:57] 2026-04-08 15:55:17,537 | INFO     | did not find any defunct processes belonging to 3875944
[2026-04-08 11:55:57] 2026-04-08 15:55:17,538 | INFO     | Ready for new job
[2026-04-08 11:55:57] 2026-04-08 15:55:17,545 | INFO     | **************************************
[2026-04-08 11:55:57] 2026-04-08 15:55:17,545 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-08 11:55:57] 2026-04-08 15:55:17,545 | INFO     | **************************************
[2026-04-08 11:55:57] 2026-04-08 15:55:17,545 | INFO     | 
[2026-04-08 11:55:57] 2026-04-08 15:55:17,547 | INFO     | architecture information:
[2026-04-08 11:55:57] 2026-04-08 15:55:17,560 | INFO     | executing command: cat /etc/os-release
[2026-04-08 11:55:57] 2026-04-08 15:55:17,678 | INFO     | cat /etc/os-release:
[2026-04-08 11:55:57] NAME="CentOS Linux"
[2026-04-08 11:55:57] VERSION="7 (Core)"
[2026-04-08 11:55:57] ID="centos"
[2026-04-08 11:55:57] ID_LIKE="rhel fedora"
[2026-04-08 11:55:57] VERSION_ID="7"
[2026-04-08 11:55:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-08 11:55:57] ANSI_COLOR="0;31"
[2026-04-08 11:55:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-08 11:55:57] HOME_URL="https://www.centos.org/"
[2026-04-08 11:55:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-08 11:55:57] 
[2026-04-08 11:55:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-08 11:55:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-08 11:55:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-08 11:55:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-08 11:55:57] 
[2026-04-08 11:55:57] 2026-04-08 15:55:17,678 | INFO     | **************************************
[2026-04-08 11:55:57] 2026-04-08 15:55:18,182 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-08 11:55:57] 2026-04-08 15:55:18,304 | INFO     | sufficient remaining disk space (76600573952 B)
[2026-04-08 11:55:57] 2026-04-08 15:55:18,305 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-08 11:55:57] 2026-04-08 15:55:18,305 | INFO     | current server update state: UPDATING_FINAL
[2026-04-08 11:55:57] 2026-04-08 15:55:18,305 | INFO     | update_server=False
[2026-04-08 11:55:57] 2026-04-08 15:55:18,305 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-08 11:55:57] 2026-04-08 15:55:18,306 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-08 11:55:57] 2026-04-08 15:55:18,703 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-08 11:55:57] 2026-04-08 15:55:18,708 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-08 11:55:57] 2026-04-08 15:55:18,708 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-08 11:55:57] 2026-04-08 15:55:18,708 | INFO     | will abort loop
[2026-04-08 11:55:57] 2026-04-08 15:55:19,103 | INFO     | all payload control threads have been joined
[2026-04-08 11:55:57] 2026-04-08 15:55:19,169 | INFO     | all data control threads have been joined
[2026-04-08 11:55:57] 2026-04-08 15:55:19,311 | INFO     | [job] retrieve thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:19,323 | INFO     | [job] validate thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:19,343 | INFO     | [payload] validate_post thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:19,694 | INFO     | [payload] execute_payloads thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:19,714 | INFO     | [job] job monitor thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:19,798 | INFO     | [data] copytool_in thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:19,912 | INFO     | all job control threads have been joined
[2026-04-08 11:55:57] 2026-04-08 15:55:19,974 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:20,063 | INFO     | [job] create_data_payload thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:20,109 | INFO     | [payload] control thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:20,175 | INFO     | [data] control thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:20,313 | INFO     | [data] copytool_out thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:20,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-08 11:55:57] 2026-04-08 15:55:20,725 | INFO     | [payload] validate_pre thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:20,854 | INFO     | [payload] failed_post thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:20,918 | INFO     | [job] control thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:20,930 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-08 11:55:57] 2026-04-08 15:55:21,485 | INFO     | [job] queue monitor thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:24,941 | INFO     | [data] queue_monitor thread has finished
[2026-04-08 11:55:57] 2026-04-08 15:55:48,795 | INFO     | PID=3860818 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-08 11:55:57] 2026-04-08 15:55:48,796 | INFO     | .. there are 27 such processes running
[2026-04-08 11:55:57] 2026-04-08 15:55:48,796 | INFO     | found 0 job(s) in 20 queues
[2026-04-08 11:55:57] 2026-04-08 15:55:48,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-08 11:55:57] 2026-04-08 15:55:48,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-08 11:55:57] 2026-04-08 15:55:48,942 | INFO     | [monitor] cgroup control has ended
[2026-04-08 11:55:57] 2026-04-08 15:55:50,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840969729856)>', '<ExcThread(monitor, started 139840460920576)>']
[2026-04-08 11:55:57] 2026-04-08 15:55:51,815 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-08 11:55:57] 2026-04-08 15:55:51,815 | INFO     | [monitor] control thread has ended
[2026-04-08 11:55:57] 2026-04-08 15:55:56,025 | INFO     | all workflow threads have been joined
[2026-04-08 11:55:57] 2026-04-08 15:55:56,025 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-08 11:55:57] 2026-04-08 15:55:56,025 | INFO     | traces error code: 0
[2026-04-08 11:55:57] 2026-04-08 15:55:56,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-08 11:55:57] 2026-04-08 15:55:56,620 [wrapper] ==== pilot stdout END ====
[2026-04-08 11:55:57] 2026-04-08 15:55:56,649 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-08 11:55:57] 2026-04-08 15:55:56,665 [wrapper] pilotpid: 3860818
[2026-04-08 11:55:57] 2026-04-08 15:55:56,694 [wrapper] Pilot exit status: 0
[2026-04-08 11:55:57] 2026-04-08 15:55:56,847 [wrapper] pandaids: 7082811840
[2026-04-08 11:55:57] 2026-04-08 15:55:57,097 [wrapper] cleanup supervisor_pilot 1041226 3860819
[2026-04-08 11:55:57] 2026-04-08 15:55:57,114 [wrapper] Test setup, not cleaning
[2026-04-08 11:55:57] 2026-04-08 15:55:57,126 [wrapper] apfmon messages muted
[2026-04-08 11:55:57] 2026-04-08 15:55:57,170 [wrapper] ==== wrapper stdout END ====
[2026-04-08 11:55:57] 2026-04-08 15:55:57,204 [wrapper] ==== wrapper stderr END ====
[2026-04-08 11:55:57]  *** Error codes and diagnostics ***
[2026-04-08 11:55:57]     "exeErrorCode": 0,
[2026-04-08 11:55:57]     "pilotErrorCode": 0,
[2026-04-08 11:55:57]  *** Listing of results directory ***
[2026-04-08 11:55:57] total 338908
[2026-04-08 11:55:57] -rw-r--r--. 1 boincer umatlas    644190 Apr  8 05:32 pilot3.tar.gz
[2026-04-08 11:55:57] -rw-r--r--. 1 boincer umatlas      5094 Apr  8 05:33 queuedata.json
[2026-04-08 11:55:57] -rwx------. 1 boincer umatlas     36322 Apr  8 05:34 runpilot2-wrapper.sh
[2026-04-08 11:55:57] -rw-r--r--. 1 boincer umatlas       100 Apr  8 05:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-08 11:55:57] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  8 05:39 run_atlas
[2026-04-08 11:55:57] -rw-r--r--. 1 boincer umatlas       105 Apr  8 05:39 job.xml
[2026-04-08 11:55:57] -rw-r--r--. 2 boincer umatlas 188430225 Apr  8 05:39 EVNT.49514755._000045.pool.root.1
[2026-04-08 11:55:57] -rw-r--r--. 2 boincer umatlas     15665 Apr  8 05:39 start_atlas.sh
[2026-04-08 11:55:57] drwxrwx--x. 2 boincer umatlas      4096 Apr  8 05:39 shared
[2026-04-08 11:55:57] -rw-r--r--. 2 boincer umatlas    656887 Apr  8 05:39 input.tar.gz
[2026-04-08 11:55:57] -rw-r--r--. 1 boincer umatlas         0 Apr  8 05:39 boinc_lockfile
[2026-04-08 11:55:57] -rw-r--r--. 1 boincer umatlas      2469 Apr  8 05:39 pandaJob.out
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas        57 Apr  8 05:39 setup.sh.local
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas    996243 Apr  8 05:39 agis_schedconf.cvmfs.json
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas       439 Apr  8 05:40 workernode_map.json
[2026-04-08 11:55:57] drwx------. 5 boincer umatlas      4096 Apr  8 05:40 pilot3
[2026-04-08 11:55:57] -rw-r--r--. 1 boincer umatlas      6576 Apr  8 11:47 init_data.xml
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas 150003141 Apr  8 11:54 HITS.49514757._001248.pool.root.1
[2026-04-08 11:55:57] -rw-r--r--. 1 boincer umatlas       489 Apr  8 11:54 boinc_task_state.xml
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas      1038 Apr  8 11:55 memory_monitor_summary.json
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas        95 Apr  8 11:55 pilot_heartbeat.json
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas   1511579 Apr  8 11:55 agis_ddmendpoints.agis.ALL.json
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas    526136 Apr  8 11:55 log.49514757._001248.job.log.tgz.1
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas      6399 Apr  8 11:55 heartbeat_new.json
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas      6290 Apr  8 11:55 heartbeat.json
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas      5005 Apr  8 11:55 pilotlog.txt
[2026-04-08 11:55:57] -rw-r--r--. 1 boincer umatlas        28 Apr  8 11:55 wrapper_checkpoint.txt
[2026-04-08 11:55:57] -rw-r--r--. 1 boincer umatlas      8192 Apr  8 11:55 boinc_mmap_file
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas   1747687 Apr  8 11:55 log.49514757._001248.job.log.1
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas       357 Apr  8 11:55 output.list
[2026-04-08 11:55:57] -rw-r--r--. 1 boincer umatlas       410 Apr  8 11:55 runtime_log
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas   2293760 Apr  8 11:55 result.tar.gz
[2026-04-08 11:55:57] -rw-r--r--. 1 boincer umatlas      8956 Apr  8 11:55 runtime_log.err
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas       655 Apr  8 11:55 2128ebf4a1ac.diag
[2026-04-08 11:55:57] -rw-r--r--. 1 boincer umatlas     21209 Apr  8 11:55 stderr.txt
[2026-04-08 11:55:57] HITS file was successfully produced:
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas 150003141 Apr  8 11:54 shared/HITS.pool.root.1
[2026-04-08 11:55:57]  *** Contents of shared directory: ***
[2026-04-08 11:55:57] total 333408
[2026-04-08 11:55:57] -rw-r--r--. 2 boincer umatlas 188430225 Apr  8 05:39 ATLAS.root_0
[2026-04-08 11:55:57] -rw-r--r--. 2 boincer umatlas     15665 Apr  8 05:39 start_atlas.sh
[2026-04-08 11:55:57] -rw-r--r--. 2 boincer umatlas    656887 Apr  8 05:39 input.tar.gz
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas 150003141 Apr  8 11:54 HITS.pool.root.1
[2026-04-08 11:55:57] -rw-------. 1 boincer umatlas   2293760 Apr  8 11:55 result.tar.gz
11:55:59 (3847663): run_atlas exited; CPU time 49421.173766
11:55:59 (3847663): called boinc_finish(0)

</stderr_txt>
]]>

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