Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:38:45 (3159091): wrapper (7.7.26015): starting
05:38:45 (3159091): wrapper: running run_atlas (--nthreads 12)
[2026-04-08 05:38:45] Arguments: --nthreads 12
[2026-04-08 05:38:45] Threads: 12
[2026-04-08 05:38:45] Checking for CVMFS
[2026-04-08 05:38:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-08 05:38:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-08 05:38:45] Running cvmfs_config stat atlas.cern.ch
[2026-04-08 05:38:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-08 05:38:46] 2.13.3.0 15733 219962 710804 158214 3 469 19694316 32935937 21502 16776704 0 963673900 99.672 796898392 28133 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-08 05:38:46] CVMFS is ok
[2026-04-08 05:38:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-08 05:38:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-08 05:38:46] Further information can be found at the LHC@home message board.
[2026-04-08 05:38:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-08 05:38:46] Checking for apptainer binary...
[2026-04-08 05:38:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-08 05:38:46] Running /usr/bin/apptainer --version
[2026-04-08 05:38:46] apptainer version 1.4.5-2.el9
[2026-04-08 05:38:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-08 05:38:46] c-8-39.aglt2.org
[2026-04-08 05:38:46] apptainer works
[2026-04-08 05:38:46] Set ATHENA_PROC_NUMBER=12
[2026-04-08 05:38:46] Set ATHENA_CORE_NUMBER=12
[2026-04-08 05:38:46] Starting ATLAS job with PandaID=7082809830
[2026-04-08 05:38:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-08 12:22:45]  *** The last 200 lines of the pilot log: ***
[2026-04-08 12:22:45] 2026-04-08 16:22:03,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-08 12:22:45] 2026-04-08 16:22:04,381 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-08 12:22:45] 2026-04-08 16:22:04,613 | INFO     | job 7082809830 has state=finished
[2026-04-08 12:22:45] 2026-04-08 16:22:04,614 | INFO     | preparing for final server update for job 7082809830 in state='finished'
[2026-04-08 12:22:45] 2026-04-08 16:22:04,614 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7082809830/jobReport.json
[2026-04-08 12:22:45] 2026-04-08 16:22:04,616 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-08 12:22:45] 2026-04-08 16:22:04,617 | INFO     | this job has now completed (state=finished)
[2026-04-08 12:22:45] 2026-04-08 16:22:04,617 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-08 12:22:45] 2026-04-08 16:22:04,621 | INFO     | log transfer has been attempted: DONE
[2026-04-08 12:22:45] 2026-04-08 16:22:04,622 | INFO     | job 7082809830 has finished - writing final server update
[2026-04-08 12:22:45] 2026-04-08 16:22:04,622 | INFO     | total number of processed events: 400 (read)
[2026-04-08 12:22:45] 2026-04-08 16:22:04,640 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7082809830/memory_monitor_summary.json (trf name=prmon)
[2026-04-08 12:22:45] 2026-04-08 16:22:04,641 | INFO     | extracted standard info from prmon json
[2026-04-08 12:22:45] 2026-04-08 16:22:04,641 | INFO     | extracted standard memory fields from prmon json
[2026-04-08 12:22:45] 2026-04-08 16:22:04,645 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-08 12:22:45] 2026-04-08 16:22:04,646 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-08 12:22:45] 2026-04-08 16:22:04,658 | INFO     | fitting pss+swap vs Time
[2026-04-08 12:22:45] 2026-04-08 16:22:04,658 | INFO     | sum of square deviations: 19110520849.407597
[2026-04-08 12:22:45] 2026-04-08 16:22:04,670 | INFO     | sum of deviations: 27005488807.63543
[2026-04-08 12:22:45] 2026-04-08 16:22:04,670 | INFO     | mean x (centered): 0.0
[2026-04-08 12:22:45] 2026-04-08 16:22:04,671 | INFO     | mean y: 2681229.311392405
[2026-04-08 12:22:45] 2026-04-08 16:22:04,671 | INFO     | intersect: 2681229.311392405
[2026-04-08 12:22:45] 2026-04-08 16:22:04,672 | INFO     | chi2: 2.297103212170525
[2026-04-08 12:22:45] 2026-04-08 16:22:04,676 | INFO     | sum of square deviations: 18394016646.53596
[2026-04-08 12:22:45] 2026-04-08 16:22:04,683 | INFO     | sum of deviations: 25457710345.487175
[2026-04-08 12:22:45] 2026-04-08 16:22:04,683 | INFO     | mean x (centered): 0.0
[2026-04-08 12:22:45] 2026-04-08 16:22:04,683 | INFO     | mean y: 2680901.8974358975
[2026-04-08 12:22:45] 2026-04-08 16:22:04,684 | INFO     | intersect: 2680901.8974358975
[2026-04-08 12:22:45] 2026-04-08 16:22:04,685 | INFO     | chi2: 2.2959952932103596
[2026-04-08 12:22:45] 2026-04-08 16:22:04,686 | INFO     | current chi2=2.2959952932103596 (change=0.04823113538370874 %)
[2026-04-08 12:22:45] 2026-04-08 16:22:04,686 | INFO     | right removable region: 389
[2026-04-08 12:22:45] 2026-04-08 16:22:04,688 | INFO     | sum of square deviations: 18393852432.976887
[2026-04-08 12:22:45] 2026-04-08 16:22:04,693 | INFO     | sum of deviations: -56274485953.1154
[2026-04-08 12:22:45] 2026-04-08 16:22:04,698 | INFO     | mean x (centered): 0.0
[2026-04-08 12:22:45] 2026-04-08 16:22:04,698 | INFO     | mean y: 2698873.628205128
[2026-04-08 12:22:45] 2026-04-08 16:22:04,699 | INFO     | intersect: 2698873.628205128
[2026-04-08 12:22:45] 2026-04-08 16:22:04,699 | INFO     | chi2: 0.37173983575578523
[2026-04-08 12:22:45] 2026-04-08 16:22:04,700 | INFO     | current chi2=0.37173983575578523 (change=83.81701641501212 %)
[2026-04-08 12:22:45] 2026-04-08 16:22:04,700 | INFO     | sum of square deviations: 17695323891.44419
[2026-04-08 12:22:45] 2026-04-08 16:22:04,708 | INFO     | sum of deviations: -63070323561.92986
[2026-04-08 12:22:45] 2026-04-08 16:22:04,708 | INFO     | mean x (centered): 0.0
[2026-04-08 12:22:45] 2026-04-08 16:22:04,709 | INFO     | mean y: 2700354.353246753
[2026-04-08 12:22:45] 2026-04-08 16:22:04,709 | INFO     | intersect: 2700354.353246753
[2026-04-08 12:22:45] 2026-04-08 16:22:04,709 | INFO     | chi2: 0.3530009205549521
[2026-04-08 12:22:45] 2026-04-08 16:22:04,710 | INFO     | current chi2=0.3530009205549521 (change=5.040868209008328 %)
[2026-04-08 12:22:45] 2026-04-08 16:22:04,710 | INFO     | left removable region: 10
[2026-04-08 12:22:45] 2026-04-08 16:22:04,714 | INFO     | sum of square deviations: 16880914596.126675
[2026-04-08 12:22:45] 2026-04-08 16:22:04,722 | INFO     | sum of deviations: -63198060512.66228
[2026-04-08 12:22:45] 2026-04-08 16:22:04,723 | INFO     | mean x (centered): 0.0
[2026-04-08 12:22:45] 2026-04-08 16:22:04,723 | INFO     | mean y: 2700328.767810026
[2026-04-08 12:22:45] 2026-04-08 16:22:04,723 | INFO     | intersect: 2700328.767810026
[2026-04-08 12:22:45] 2026-04-08 16:22:04,724 | INFO     | chi2: 0.3503665781566806
[2026-04-08 12:22:45] 2026-04-08 16:22:04,724 | INFO     | current memory leak: -3.74 B/s (using 379 data points, chi2=0.35)
[2026-04-08 12:22:45] 2026-04-08 16:22:04,725 | INFO     | could have reported an average CPU frequency of 2462 MHz (17 samples)
[2026-04-08 12:22:45] 2026-04-08 16:22:04,725 | INFO     | ..............................
[2026-04-08 12:22:45] 2026-04-08 16:22:04,725 | INFO     | . Timing measurements:
[2026-04-08 12:22:45] 2026-04-08 16:22:04,725 | INFO     | . get job = 0 s
[2026-04-08 12:22:45] 2026-04-08 16:22:04,725 | INFO     | . initial setup = 19 s
[2026-04-08 12:22:45] 2026-04-08 16:22:04,725 | INFO     | . payload setup = 33 s
[2026-04-08 12:22:45] 2026-04-08 16:22:04,725 | INFO     | . stage-in = 0 s
[2026-04-08 12:22:45] 2026-04-08 16:22:04,725 | INFO     | . payload execution = 24094 s
[2026-04-08 12:22:45] 2026-04-08 16:22:04,725 | INFO     | . stage-out = 4 s
[2026-04-08 12:22:45] 2026-04-08 16:22:04,726 | INFO     | . log creation = 0 s
[2026-04-08 12:22:45] 2026-04-08 16:22:04,726 | INFO     | ..............................
[2026-04-08 12:22:45] 2026-04-08 16:22:05,037 | INFO     | 
[2026-04-08 12:22:45] 2026-04-08 16:22:05,038 | INFO     | job summary report
[2026-04-08 12:22:45] 2026-04-08 16:22:05,038 | INFO     | --------------------------------------------------
[2026-04-08 12:22:45] 2026-04-08 16:22:05,038 | INFO     | PanDA job id: 7082809830
[2026-04-08 12:22:45] 2026-04-08 16:22:05,038 | INFO     | task id: 49514757
[2026-04-08 12:22:45] 2026-04-08 16:22:05,038 | INFO     | errors: (none)
[2026-04-08 12:22:45] 2026-04-08 16:22:05,038 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-08 12:22:45] 2026-04-08 16:22:05,038 | INFO     | pilot state: finished 
[2026-04-08 12:22:45] 2026-04-08 16:22:05,038 | INFO     | transexitcode: 0
[2026-04-08 12:22:45] 2026-04-08 16:22:05,039 | INFO     | exeerrorcode: 0
[2026-04-08 12:22:45] 2026-04-08 16:22:05,039 | INFO     | exeerrordiag: 
[2026-04-08 12:22:45] 2026-04-08 16:22:05,039 | INFO     | exitcode: 0
[2026-04-08 12:22:45] 2026-04-08 16:22:05,039 | INFO     | exitmsg: OK
[2026-04-08 12:22:45] 2026-04-08 16:22:05,039 | INFO     | cpuconsumptiontime: 53665 s
[2026-04-08 12:22:45] 2026-04-08 16:22:05,039 | INFO     | nevents: 400
[2026-04-08 12:22:45] 2026-04-08 16:22:05,043 | INFO     | neventsw: 0
[2026-04-08 12:22:45] 2026-04-08 16:22:05,043 | INFO     | pid: 3180784
[2026-04-08 12:22:45] 2026-04-08 16:22:05,044 | INFO     | pgrp: 3180784
[2026-04-08 12:22:45] 2026-04-08 16:22:05,044 | INFO     | corecount: 12
[2026-04-08 12:22:45] 2026-04-08 16:22:05,044 | INFO     | event service: False
[2026-04-08 12:22:45] 2026-04-08 16:22:05,044 | INFO     | sizes: {0: 2279516, 1: 2281401, 2: 2281401, 24132: 2316252, 24138: 2325250, 24140: 2325306, 24141: 2325692}
[2026-04-08 12:22:45] 2026-04-08 16:22:05,044 | INFO     | --------------------------------------------------
[2026-04-08 12:22:45] 2026-04-08 16:22:05,044 | INFO     | 
[2026-04-08 12:22:45] 2026-04-08 16:22:05,044 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-08 12:22:45] 2026-04-08 16:22:05,217 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,217 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,217 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,217 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,217 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,217 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,218 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,218 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,219 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-08 12:22:45] 2026-04-08 16:22:05,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,219 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-08 12:22:45] 2026-04-08 16:22:05,219 | INFO     | job 7082809830 has completed (purged errors)
[2026-04-08 12:22:45] 2026-04-08 16:22:05,220 | INFO     | overall cleanup function is called
[2026-04-08 12:22:45] 2026-04-08 16:22:06,241 | INFO     | --- collectZombieJob: --- 10, [3180784]
[2026-04-08 12:22:45] 2026-04-08 16:22:06,241 | INFO     | zombie collector waiting for pid 3180784
[2026-04-08 12:22:45] 2026-04-08 16:22:06,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-08 12:22:45] 2026-04-08 16:22:06,242 | INFO     | collected zombie processes
[2026-04-08 12:22:45] 2026-04-08 16:22:06,242 | INFO     | will attempt to kill all subprocesses of pid=3180784
[2026-04-08 12:22:45] 2026-04-08 16:22:08,959 | INFO     | PID=3166719 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-08 12:22:45] 2026-04-08 16:22:09,065 | INFO     | .. there are 28 such processes running
[2026-04-08 12:22:45] 2026-04-08 16:22:09,067 | INFO     | process IDs to be killed: [3180784] (in reverse order)
[2026-04-08 12:22:45] 2026-04-08 16:22:09,441 | WARNING  | found no corresponding commands to process id(s)
[2026-04-08 12:22:45] 2026-04-08 16:22:09,441 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-08 12:22:45] 2026-04-08 16:22:09,457 | INFO     | did not find any defunct processes belonging to 3180784
[2026-04-08 12:22:45] 2026-04-08 16:22:09,473 | INFO     | did not find any defunct processes belonging to 3180784
[2026-04-08 12:22:45] 2026-04-08 16:22:09,473 | INFO     | Ready for new job
[2026-04-08 12:22:45] 2026-04-08 16:22:09,476 | INFO     | **************************************
[2026-04-08 12:22:45] 2026-04-08 16:22:09,476 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-08 12:22:45] 2026-04-08 16:22:09,476 | INFO     | **************************************
[2026-04-08 12:22:45] 2026-04-08 16:22:09,476 | INFO     | 
[2026-04-08 12:22:45] 2026-04-08 16:22:09,479 | INFO     | architecture information:
[2026-04-08 12:22:45] 2026-04-08 16:22:09,479 | INFO     | executing command: cat /etc/os-release
[2026-04-08 12:22:45] 2026-04-08 16:22:09,541 | INFO     | cat /etc/os-release:
[2026-04-08 12:22:45] NAME="CentOS Linux"
[2026-04-08 12:22:45] VERSION="7 (Core)"
[2026-04-08 12:22:45] ID="centos"
[2026-04-08 12:22:45] ID_LIKE="rhel fedora"
[2026-04-08 12:22:45] VERSION_ID="7"
[2026-04-08 12:22:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-08 12:22:45] ANSI_COLOR="0;31"
[2026-04-08 12:22:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-08 12:22:45] HOME_URL="https://www.centos.org/"
[2026-04-08 12:22:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-08 12:22:45] 
[2026-04-08 12:22:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-08 12:22:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-08 12:22:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-08 12:22:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-08 12:22:45] 
[2026-04-08 12:22:45] 2026-04-08 16:22:09,542 | INFO     | **************************************
[2026-04-08 12:22:45] 2026-04-08 16:22:10,046 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-08 12:22:45] 2026-04-08 16:22:10,244 | INFO     | sufficient remaining disk space (75792121856 B)
[2026-04-08 12:22:45] 2026-04-08 16:22:10,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-08 12:22:45] 2026-04-08 16:22:10,244 | INFO     | current server update state: UPDATING_FINAL
[2026-04-08 12:22:45] 2026-04-08 16:22:10,244 | INFO     | update_server=False
[2026-04-08 12:22:45] 2026-04-08 16:22:10,244 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-08 12:22:45] 2026-04-08 16:22:10,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-08 12:22:45] 2026-04-08 16:22:10,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-08 12:22:45] 2026-04-08 16:22:10,266 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-08 12:22:45] 2026-04-08 16:22:10,266 | INFO     | aborting loop
[2026-04-08 12:22:45] 2026-04-08 16:22:10,356 | INFO     | all payload control threads have been joined
[2026-04-08 12:22:45] 2026-04-08 16:22:10,700 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-08 12:22:45] 2026-04-08 16:22:11,145 | INFO     | all data control threads have been joined
[2026-04-08 12:22:45] 2026-04-08 16:22:11,261 | INFO     | [job] retrieve thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:11,305 | INFO     | [job] queue monitor thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:11,306 | INFO     | [job] job monitor thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:11,332 | INFO     | [payload] failed_post thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:11,347 | INFO     | [data] copytool_in thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:11,383 | INFO     | [payload] control thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:11,921 | INFO     | all job control threads have been joined
[2026-04-08 12:22:45] 2026-04-08 16:22:11,928 | INFO     | [payload] validate_post thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:11,930 | INFO     | [job] create_data_payload thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:12,151 | INFO     | [data] control thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:12,152 | INFO     | [job] validate thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:12,311 | INFO     | [data] copytool_out thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:12,505 | INFO     | [payload] execute_payloads thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:12,610 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:12,746 | INFO     | [payload] validate_pre thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:12,927 | INFO     | [job] control thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:14,722 | INFO     | [data] queue_monitor thread has finished
[2026-04-08 12:22:45] 2026-04-08 16:22:29,420 | INFO     | [monitor] cgroup control has ended
[2026-04-08 12:22:45] 2026-04-08 16:22:31,083 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140414838794048)>', '<ExcThread(monitor, started 140414191384320)>']
[2026-04-08 12:22:45] 2026-04-08 16:22:36,108 | INFO     | all workflow threads have been joined
[2026-04-08 12:22:45] 2026-04-08 16:22:36,109 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-08 12:22:45] 2026-04-08 16:22:36,109 | INFO     | traces error code: 0
[2026-04-08 12:22:45] 2026-04-08 16:22:36,109 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-08 12:22:45] 2026-04-08 16:22:43,544 | INFO     | PID=3166719 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-08 12:22:45] 2026-04-08 16:22:43,545 | INFO     | .. there are 28 such processes running
[2026-04-08 12:22:45] 2026-04-08 16:22:43,545 | INFO     | found 0 job(s) in 20 queues
[2026-04-08 12:22:45] 2026-04-08 16:22:43,545 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-08 12:22:45] 2026-04-08 16:22:43,545 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-08 12:22:45] 2026-04-08 16:22:43,545 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-08 12:22:45] 2026-04-08 16:22:43,546 | INFO     | [monitor] control thread has ended
[2026-04-08 12:22:45] 2026-04-08 16:22:44,289 [wrapper] ==== pilot stdout END ====
[2026-04-08 12:22:45] 2026-04-08 16:22:44,334 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-08 12:22:45] 2026-04-08 16:22:44,375 [wrapper] pilotpid: 3166719
[2026-04-08 12:22:45] 2026-04-08 16:22:44,406 [wrapper] Pilot exit status: 0
[2026-04-08 12:22:45] 2026-04-08 16:22:44,627 [wrapper] pandaids: 7082809830
[2026-04-08 12:22:45] 2026-04-08 16:22:44,856 [wrapper] cleanup supervisor_pilot  115274 3166720
[2026-04-08 12:22:45] 2026-04-08 16:22:44,906 [wrapper] Test setup, not cleaning
[2026-04-08 12:22:45] 2026-04-08 16:22:44,929 [wrapper] apfmon messages muted
[2026-04-08 12:22:45] 2026-04-08 16:22:44,959 [wrapper] ==== wrapper stdout END ====
[2026-04-08 12:22:45] 2026-04-08 16:22:44,996 [wrapper] ==== wrapper stderr END ====
[2026-04-08 12:22:45]  *** Error codes and diagnostics ***
[2026-04-08 12:22:45]     "exeErrorCode": 0,
[2026-04-08 12:22:45]     "pilotErrorCode": 0,
[2026-04-08 12:22:45]  *** Listing of results directory ***
[2026-04-08 12:22:45] total 340616
[2026-04-08 12:22:45] -rw-r--r--. 1 boincer umatlas    644190 Apr  8 05:32 pilot3.tar.gz
[2026-04-08 12:22:45] -rw-r--r--. 1 boincer umatlas      5094 Apr  8 05:33 queuedata.json
[2026-04-08 12:22:45] -rwx------. 1 boincer umatlas     36322 Apr  8 05:34 runpilot2-wrapper.sh
[2026-04-08 12:22:45] -rw-r--r--. 1 boincer umatlas       100 Apr  8 05:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-08 12:22:45] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  8 05:38 run_atlas
[2026-04-08 12:22:45] -rw-r--r--. 1 boincer umatlas       105 Apr  8 05:38 job.xml
[2026-04-08 12:22:45] -rw-r--r--. 2 boincer umatlas 188960371 Apr  8 05:38 EVNT.49514755._000036.pool.root.1
[2026-04-08 12:22:45] -rw-r--r--. 2 boincer umatlas     15665 Apr  8 05:38 start_atlas.sh
[2026-04-08 12:22:45] drwxrwx--x. 2 boincer umatlas      4096 Apr  8 05:38 shared
[2026-04-08 12:22:45] -rw-r--r--. 2 boincer umatlas    656889 Apr  8 05:38 input.tar.gz
[2026-04-08 12:22:45] -rw-r--r--. 1 boincer umatlas         0 Apr  8 05:38 boinc_lockfile
[2026-04-08 12:22:45] -rw-r--r--. 1 boincer umatlas      2469 Apr  8 05:38 pandaJob.out
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas        57 Apr  8 05:38 setup.sh.local
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas    996243 Apr  8 05:39 agis_schedconf.cvmfs.json
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas       439 Apr  8 05:39 workernode_map.json
[2026-04-08 12:22:45] drwx------. 5 boincer umatlas      4096 Apr  8 05:39 pilot3
[2026-04-08 12:22:45] -rw-r--r--. 1 boincer umatlas      6529 Apr  8 12:18 init_data.xml
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas 151234185 Apr  8 12:21 HITS.49514757._001020.pool.root.1
[2026-04-08 12:22:45] -rw-r--r--. 1 boincer umatlas       489 Apr  8 12:21 boinc_task_state.xml
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas        95 Apr  8 12:21 pilot_heartbeat.json
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas      1041 Apr  8 12:21 memory_monitor_summary.json
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas   1511579 Apr  8 12:21 agis_ddmendpoints.agis.ALL.json
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas    525925 Apr  8 12:22 log.49514757._001020.job.log.tgz.1
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas      6401 Apr  8 12:22 heartbeat_new.json
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas      6292 Apr  8 12:22 heartbeat.json
[2026-04-08 12:22:45] -rw-r--r--. 1 boincer umatlas        28 Apr  8 12:22 wrapper_checkpoint.txt
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas       823 Apr  8 12:22 pilotlog.txt
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas   1742125 Apr  8 12:22 log.49514757._001020.job.log.1
[2026-04-08 12:22:45] -rw-r--r--. 1 boincer umatlas      8192 Apr  8 12:22 boinc_mmap_file
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas       357 Apr  8 12:22 output.list
[2026-04-08 12:22:45] -rw-r--r--. 1 boincer umatlas       410 Apr  8 12:22 runtime_log
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas   2283520 Apr  8 12:22 result.tar.gz
[2026-04-08 12:22:45] -rw-r--r--. 1 boincer umatlas      8956 Apr  8 12:22 runtime_log.err
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas       656 Apr  8 12:22 211b4634a441.diag
[2026-04-08 12:22:45] -rw-r--r--. 1 boincer umatlas     21355 Apr  8 12:22 stderr.txt
[2026-04-08 12:22:45] HITS file was successfully produced:
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas 151234185 Apr  8 12:21 shared/HITS.pool.root.1
[2026-04-08 12:22:45]  *** Contents of shared directory: ***
[2026-04-08 12:22:45] total 335124
[2026-04-08 12:22:45] -rw-r--r--. 2 boincer umatlas 188960371 Apr  8 05:38 ATLAS.root_0
[2026-04-08 12:22:45] -rw-r--r--. 2 boincer umatlas     15665 Apr  8 05:38 start_atlas.sh
[2026-04-08 12:22:45] -rw-r--r--. 2 boincer umatlas    656889 Apr  8 05:38 input.tar.gz
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas 151234185 Apr  8 12:21 HITS.pool.root.1
[2026-04-08 12:22:45] -rw-------. 1 boincer umatlas   2283520 Apr  8 12:22 result.tar.gz
12:22:47 (3159091): run_atlas exited; CPU time 54778.644852
12:22:47 (3159091): called boinc_finish(0)

</stderr_txt>
]]>

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