Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:54:44 (8648): wrapper (7.7.26015): starting
04:54:44 (8648): wrapper: running run_atlas (--nthreads 8)
[2026-04-08 04:54:44] Arguments: --nthreads 8
[2026-04-08 04:54:44] Threads: 8
[2026-04-08 04:54:44] Checking for CVMFS
[2026-04-08 04:54:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-08 04:54:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-08 04:54:44] Running cvmfs_config stat atlas.cern.ch
[2026-04-08 04:54:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-08 04:54:45] 2.11.2.0 28705 309149 143832 158212 2 32 13264160 18432000 917 130560 1 191003997 99.983 11436263 26682 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-08 04:54:45] CVMFS is ok
[2026-04-08 04:54:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-08 04:54:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-08 04:54:45] Further information can be found at the LHC@home message board.
[2026-04-08 04:54:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-08 04:54:45] Checking for apptainer binary...
[2026-04-08 04:54:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-08 04:54:45] Running /usr/bin/apptainer --version
[2026-04-08 04:54:45] apptainer version 1.3.2-1.el7
[2026-04-08 04:54:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-08 04:54:45] c-206-27.aglt2.org
[2026-04-08 04:54:45] apptainer works
[2026-04-08 04:54:45] Set ATHENA_PROC_NUMBER=8
[2026-04-08 04:54:45] Set ATHENA_CORE_NUMBER=8
[2026-04-08 04:54:45] Starting ATLAS job with PandaID=7072963847
[2026-04-08 04:54:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-08 07:39:21]  *** The last 200 lines of the pilot log: ***
[2026-04-08 07:39:21] 2026-04-08 11:38:34,486 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-04-08 07:39:21] 2026-04-08 11:38:34,486 | INFO     | this job has now completed (state=finished)
[2026-04-08 07:39:21] 2026-04-08 11:38:34,487 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-08 07:39:21] 2026-04-08 11:38:34,487 | INFO     | log transfer has been attempted: DONE
[2026-04-08 07:39:21] 2026-04-08 11:38:34,487 | INFO     | job 7072963847 has finished - writing final server update
[2026-04-08 07:39:21] 2026-04-08 11:38:34,487 | INFO     | total number of processed events: 400 (read)
[2026-04-08 07:39:21] 2026-04-08 11:38:34,492 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7072963847/memory_monitor_summary.json (trf name=prmon)
[2026-04-08 07:39:21] 2026-04-08 11:38:34,493 | INFO     | extracted standard info from prmon json
[2026-04-08 07:39:21] 2026-04-08 11:38:34,493 | INFO     | extracted standard memory fields from prmon json
[2026-04-08 07:39:21] 2026-04-08 11:38:34,494 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-08 07:39:21] 2026-04-08 11:38:34,494 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-08 07:39:21] 2026-04-08 11:38:34,499 | INFO     | fitting pss+swap vs Time
[2026-04-08 07:39:21] 2026-04-08 11:38:34,499 | INFO     | sum of square deviations: 1294014960.0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,500 | INFO     | sum of deviations: -5643898852.000008
[2026-04-08 07:39:21] 2026-04-08 11:38:34,501 | INFO     | mean x (centered): 0.0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,501 | INFO     | mean y: 2484743.366459627
[2026-04-08 07:39:21] 2026-04-08 11:38:34,501 | INFO     | intersect: 2484743.366459627
[2026-04-08 07:39:21] 2026-04-08 11:38:34,501 | INFO     | chi2: 2.2182529155306083
[2026-04-08 07:39:21] 2026-04-08 11:38:34,502 | INFO     | sum of square deviations: 1177156955.0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,503 | INFO     | sum of deviations: 5101812744.499993
[2026-04-08 07:39:21] 2026-04-08 11:38:34,503 | INFO     | mean x (centered): 0.0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,503 | INFO     | mean y: 2498417.4166666665
[2026-04-08 07:39:21] 2026-04-08 11:38:34,504 | INFO     | intersect: 2498417.4166666665
[2026-04-08 07:39:21] 2026-04-08 11:38:34,504 | INFO     | chi2: 1.44542026130424
[2026-04-08 07:39:21] 2026-04-08 11:38:34,504 | INFO     | current chi2=1.44542026130424 (change=34.8396996940949 %)
[2026-04-08 07:39:21] 2026-04-08 11:38:34,505 | INFO     | sum of square deviations: 1067554900.0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,506 | INFO     | sum of deviations: 5012830062.000001
[2026-04-08 07:39:21] 2026-04-08 11:38:34,506 | INFO     | mean x (centered): 0.0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,506 | INFO     | mean y: 2498293.562913907
[2026-04-08 07:39:21] 2026-04-08 11:38:34,507 | INFO     | intersect: 2498293.562913907
[2026-04-08 07:39:21] 2026-04-08 11:38:34,507 | INFO     | chi2: 1.4464182561113865
[2026-04-08 07:39:21] 2026-04-08 11:38:34,507 | INFO     | current chi2=1.4464182561113865 (change=-0.06904530356078291 %)
[2026-04-08 07:39:21] 2026-04-08 11:38:34,507 | INFO     | right removable region: 150
[2026-04-08 07:39:21] 2026-04-08 11:38:34,508 | INFO     | sum of square deviations: 1177156955.0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,509 | INFO     | sum of deviations: -26940477492.0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,509 | INFO     | mean x (centered): 0.0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,509 | INFO     | mean y: 2512083.9743589745
[2026-04-08 07:39:21] 2026-04-08 11:38:34,510 | INFO     | intersect: 2512083.9743589745
[2026-04-08 07:39:21] 2026-04-08 11:38:34,510 | INFO     | chi2: 0.9153500006463289
[2026-04-08 07:39:21] 2026-04-08 11:38:34,510 | INFO     | current chi2=0.9153500006463289 (change=58.73554389412913 %)
[2026-04-08 07:39:21] 2026-04-08 11:38:34,511 | INFO     | sum of square deviations: 1067554900.0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,512 | INFO     | sum of deviations: -21865466958.0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,512 | INFO     | mean x (centered): 0.0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,512 | INFO     | mean y: 2505008.072847682
[2026-04-08 07:39:21] 2026-04-08 11:38:34,512 | INFO     | intersect: 2505008.072847682
[2026-04-08 07:39:21] 2026-04-08 11:38:34,513 | INFO     | chi2: 0.9010696339556188
[2026-04-08 07:39:21] 2026-04-08 11:38:34,513 | INFO     | current chi2=0.9010696339556188 (change=1.5600990528897927 %)
[2026-04-08 07:39:21] 2026-04-08 11:38:34,513 | INFO     | left removable region: 10
[2026-04-08 07:39:21] 2026-04-08 11:38:34,514 | INFO     | sum of square deviations: 850825255.0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,515 | INFO     | sum of deviations: -10818645484.000002
[2026-04-08 07:39:21] 2026-04-08 11:38:34,515 | INFO     | mean x (centered): 0.0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,515 | INFO     | mean y: 2521090.785714286
[2026-04-08 07:39:21] 2026-04-08 11:38:34,515 | INFO     | intersect: 2521090.785714286
[2026-04-08 07:39:21] 2026-04-08 11:38:34,516 | INFO     | chi2: 0.09892519346275032
[2026-04-08 07:39:21] 2026-04-08 11:38:34,516 | INFO     | current memory leak: -12.72 B/s (using 140 data points, chi2=0.10)
[2026-04-08 07:39:21] 2026-04-08 11:38:34,516 | INFO     | could have reported an average CPU frequency of 2056 MHz (9 samples)
[2026-04-08 07:39:21] 2026-04-08 11:38:34,517 | INFO     | ..............................
[2026-04-08 07:39:21] 2026-04-08 11:38:34,517 | INFO     | . Timing measurements:
[2026-04-08 07:39:21] 2026-04-08 11:38:34,517 | INFO     | . get job = 0 s
[2026-04-08 07:39:21] 2026-04-08 11:38:34,517 | INFO     | . initial setup = 5 s
[2026-04-08 07:39:21] 2026-04-08 11:38:34,517 | INFO     | . payload setup = 7 s
[2026-04-08 07:39:21] 2026-04-08 11:38:34,517 | INFO     | . stage-in = 0 s
[2026-04-08 07:39:21] 2026-04-08 11:38:34,518 | INFO     | . payload execution = 9786 s
[2026-04-08 07:39:21] 2026-04-08 11:38:34,518 | INFO     | . stage-out = 0 s
[2026-04-08 07:39:21] 2026-04-08 11:38:34,518 | INFO     | . log creation = 0 s
[2026-04-08 07:39:21] 2026-04-08 11:38:34,518 | INFO     | ..............................
[2026-04-08 07:39:21] 2026-04-08 11:38:34,674 | INFO     | 
[2026-04-08 07:39:21] 2026-04-08 11:38:34,675 | INFO     | job summary report
[2026-04-08 07:39:21] 2026-04-08 11:38:34,675 | INFO     | --------------------------------------------------
[2026-04-08 07:39:21] 2026-04-08 11:38:34,675 | INFO     | PanDA job id: 7072963847
[2026-04-08 07:39:21] 2026-04-08 11:38:34,675 | INFO     | task id: 49263208
[2026-04-08 07:39:21] 2026-04-08 11:38:34,675 | INFO     | errors: (none)
[2026-04-08 07:39:21] 2026-04-08 11:38:34,675 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-08 07:39:21] 2026-04-08 11:38:34,676 | INFO     | pilot state: finished 
[2026-04-08 07:39:21] 2026-04-08 11:38:34,676 | INFO     | transexitcode: 0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,676 | INFO     | exeerrorcode: 0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,676 | INFO     | exeerrordiag: 
[2026-04-08 07:39:21] 2026-04-08 11:38:34,676 | INFO     | exitcode: 0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,677 | INFO     | exitmsg: OK
[2026-04-08 07:39:21] 2026-04-08 11:38:34,677 | INFO     | cpuconsumptiontime: 74277 s
[2026-04-08 07:39:21] 2026-04-08 11:38:34,677 | INFO     | nevents: 400
[2026-04-08 07:39:21] 2026-04-08 11:38:34,677 | INFO     | neventsw: 0
[2026-04-08 07:39:21] 2026-04-08 11:38:34,677 | INFO     | pid: 16929
[2026-04-08 07:39:21] 2026-04-08 11:38:34,677 | INFO     | pgrp: 16929
[2026-04-08 07:39:21] 2026-04-08 11:38:34,678 | INFO     | corecount: 8
[2026-04-08 07:39:21] 2026-04-08 11:38:34,678 | INFO     | event service: False
[2026-04-08 07:39:21] 2026-04-08 11:38:34,678 | INFO     | sizes: {0: 2279784, 1: 2281613, 11: 2281613, 9797: 2310272, 9800: 2319270, 9803: 2319326, 9804: 2319712}
[2026-04-08 07:39:21] 2026-04-08 11:38:34,678 | INFO     | --------------------------------------------------
[2026-04-08 07:39:21] 2026-04-08 11:38:34,678 | INFO     | 
[2026-04-08 07:39:21] 2026-04-08 11:38:34,678 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-08 07:39:21] 2026-04-08 11:38:34,697 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,697 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,698 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,698 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,698 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,699 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,699 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,699 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,699 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,700 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,700 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,700 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,700 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,700 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-08 07:39:21] 2026-04-08 11:38:34,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,701 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-08 07:39:21] 2026-04-08 11:38:34,701 | INFO     | job 7072963847 has completed (purged errors)
[2026-04-08 07:39:21] 2026-04-08 11:38:34,701 | INFO     | overall cleanup function is called
[2026-04-08 07:39:21] 2026-04-08 11:38:35,709 | INFO     | --- collectZombieJob: --- 10, [16929]
[2026-04-08 07:39:21] 2026-04-08 11:38:35,710 | INFO     | zombie collector waiting for pid 16929
[2026-04-08 07:39:21] 2026-04-08 11:38:35,710 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-08 07:39:21] 2026-04-08 11:38:35,710 | INFO     | collected zombie processes
[2026-04-08 07:39:21] 2026-04-08 11:38:35,710 | INFO     | will attempt to kill all subprocesses of pid=16929
[2026-04-08 07:39:21] 2026-04-08 11:38:35,887 | INFO     | process IDs to be killed: [16929] (in reverse order)
[2026-04-08 07:39:21] 2026-04-08 11:38:35,945 | WARNING  | found no corresponding commands to process id(s)
[2026-04-08 07:39:21] 2026-04-08 11:38:35,945 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-08 07:39:21] 2026-04-08 11:38:35,948 | INFO     | did not find any defunct processes belonging to 16929
[2026-04-08 07:39:21] 2026-04-08 11:38:35,951 | INFO     | did not find any defunct processes belonging to 16929
[2026-04-08 07:39:21] 2026-04-08 11:38:35,951 | INFO     | Ready for new job
[2026-04-08 07:39:21] 2026-04-08 11:38:35,952 | INFO     | **************************************
[2026-04-08 07:39:21] 2026-04-08 11:38:35,952 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-08 07:39:21] 2026-04-08 11:38:35,952 | INFO     | **************************************
[2026-04-08 07:39:21] 2026-04-08 11:38:35,952 | INFO     | 
[2026-04-08 07:39:21] 2026-04-08 11:38:35,953 | INFO     | architecture information:
[2026-04-08 07:39:21] 2026-04-08 11:38:35,953 | INFO     | executing command: cat /etc/os-release
[2026-04-08 07:39:21] 2026-04-08 11:38:35,963 | INFO     | cat /etc/os-release:
[2026-04-08 07:39:21] NAME="CentOS Linux"
[2026-04-08 07:39:21] VERSION="7 (Core)"
[2026-04-08 07:39:21] ID="centos"
[2026-04-08 07:39:21] ID_LIKE="rhel fedora"
[2026-04-08 07:39:21] VERSION_ID="7"
[2026-04-08 07:39:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-08 07:39:21] ANSI_COLOR="0;31"
[2026-04-08 07:39:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-08 07:39:21] HOME_URL="https://www.centos.org/"
[2026-04-08 07:39:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-08 07:39:21] 
[2026-04-08 07:39:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-08 07:39:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-08 07:39:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-08 07:39:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-08 07:39:21] 
[2026-04-08 07:39:21] 2026-04-08 11:38:35,963 | INFO     | **************************************
[2026-04-08 07:39:21] 2026-04-08 11:38:36,466 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-08 07:39:21] 2026-04-08 11:38:36,482 | INFO     | sufficient remaining disk space (28308406272 B)
[2026-04-08 07:39:21] 2026-04-08 11:38:36,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-08 07:39:21] 2026-04-08 11:38:36,483 | INFO     | current server update state: UPDATING_FINAL
[2026-04-08 07:39:21] 2026-04-08 11:38:36,483 | INFO     | update_server=False
[2026-04-08 07:39:21] 2026-04-08 11:38:36,484 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-08 07:39:21] 2026-04-08 11:38:36,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-08 07:39:21] 2026-04-08 11:38:36,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-08 07:39:21] 2026-04-08 11:38:36,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-08 07:39:21] 2026-04-08 11:38:36,485 | INFO     | aborting loop
[2026-04-08 07:39:21] 2026-04-08 11:38:36,502 | INFO     | all payload control threads have been joined
[2026-04-08 07:39:21] 2026-04-08 11:38:36,762 | INFO     | all data control threads have been joined
[2026-04-08 07:39:21] 2026-04-08 11:38:37,490 | INFO     | [job] job monitor thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:37,491 | INFO     | [job] queue monitor thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:37,491 | INFO     | [job] retrieve thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:37,508 | INFO     | [payload] control thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:37,755 | INFO     | all job control threads have been joined
[2026-04-08 07:39:21] 2026-04-08 11:38:37,767 | INFO     | [data] control thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:37,999 | INFO     | [payload] failed_post thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:38,095 | INFO     | [job] validate thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:38,182 | INFO     | [payload] execute_payloads thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:38,184 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:38,373 | INFO     | [payload] validate_pre thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:38,382 | INFO     | [job] create_data_payload thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:38,492 | INFO     | [data] copytool_out thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:38,761 | INFO     | [job] control thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:38,769 | INFO     | [data] copytool_in thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:38,887 | INFO     | [payload] validate_post thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:38:39,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-08 07:39:21] 2026-04-08 11:38:43,762 | INFO     | [data] queue_monitor thread has finished
[2026-04-08 07:39:21] 2026-04-08 11:39:06,927 | INFO     | PID=12333 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-08 07:39:21] 2026-04-08 11:39:06,927 | INFO     | .. there are 3 such processes running
[2026-04-08 07:39:21] 2026-04-08 11:39:06,928 | INFO     | found 0 job(s) in 20 queues
[2026-04-08 07:39:21] 2026-04-08 11:39:06,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-08 07:39:21] 2026-04-08 11:39:06,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-08 07:39:21] 2026-04-08 11:39:14,499 | INFO     | [monitor] cgroup control has ended
[2026-04-08 07:39:21] 2026-04-08 11:39:16,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140553281763136)>', '<ExcThread(monitor, started 140552829904640)>']
[2026-04-08 07:39:21] 2026-04-08 11:39:16,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-08 07:39:21] 2026-04-08 11:39:16,990 | INFO     | [monitor] control thread has ended
[2026-04-08 07:39:21] 2026-04-08 11:39:21,324 | INFO     | all workflow threads have been joined
[2026-04-08 07:39:21] 2026-04-08 11:39:21,324 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-08 07:39:21] 2026-04-08 11:39:21,324 | INFO     | traces error code: 0
[2026-04-08 07:39:21] 2026-04-08 11:39:21,325 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-08 07:39:21] 2026-04-08 11:39:21,422 [wrapper] ==== pilot stdout END ====
[2026-04-08 07:39:21] 2026-04-08 11:39:21,423 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-08 07:39:21] 2026-04-08 11:39:21,425 [wrapper] pilotpid: 12333
[2026-04-08 07:39:21] 2026-04-08 11:39:21,428 [wrapper] Pilot exit status: 0
[2026-04-08 07:39:21] 2026-04-08 11:39:21,436 [wrapper] pandaids: 7072963847
[2026-04-08 07:39:21] 2026-04-08 11:39:21,466 [wrapper] cleanup supervisor_pilot 18898 12334
[2026-04-08 07:39:21] 2026-04-08 11:39:21,468 [wrapper] Test setup, not cleaning
[2026-04-08 07:39:21] 2026-04-08 11:39:21,470 [wrapper] apfmon messages muted
[2026-04-08 07:39:21] 2026-04-08 11:39:21,472 [wrapper] ==== wrapper stdout END ====
[2026-04-08 07:39:21] 2026-04-08 11:39:21,474 [wrapper] ==== wrapper stderr END ====
[2026-04-08 07:39:21]  *** Error codes and diagnostics ***
[2026-04-08 07:39:21]     "exeErrorCode": 0,
[2026-04-08 07:39:21]     "pilotErrorCode": 0,
[2026-04-08 07:39:21]  *** Listing of results directory ***
[2026-04-08 07:39:21] total 418224
[2026-04-08 07:39:21] -rw-r--r-- 1 boincer umatlas    644034 Mar 31 01:48 pilot3.tar.gz
[2026-04-08 07:39:21] -rw-r--r-- 1 boincer umatlas      5118 Mar 31 01:54 queuedata.json
[2026-04-08 07:39:21] -rwx------ 1 boincer umatlas     36322 Mar 31 01:55 runpilot2-wrapper.sh
[2026-04-08 07:39:21] -rw-r--r-- 1 boincer umatlas       100 Apr  8 04:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-08 07:39:21] -rwxr-xr-x 1 boincer umatlas      7986 Apr  8 04:54 run_atlas
[2026-04-08 07:39:21] -rw-r--r-- 1 boincer umatlas       105 Apr  8 04:54 job.xml
[2026-04-08 07:39:21] -rw-r--r-- 2 boincer umatlas 222379858 Apr  8 04:54 EVNT.49263206._000527.pool.root.1
[2026-04-08 07:39:21] -rw-r--r-- 2 boincer umatlas     15845 Apr  8 04:54 start_atlas.sh
[2026-04-08 07:39:21] drwxrwx--x 2 boincer umatlas      4096 Apr  8 04:54 shared
[2026-04-08 07:39:21] -rw-r--r-- 2 boincer umatlas    656747 Apr  8 04:54 input.tar.gz
[2026-04-08 07:39:21] -rw-r--r-- 1 boincer umatlas         0 Apr  8 04:54 boinc_lockfile
[2026-04-08 07:39:21] -rw-r--r-- 1 boincer umatlas      2572 Apr  8 04:54 pandaJob.out
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas        57 Apr  8 04:54 setup.sh.local
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas    996241 Apr  8 04:54 agis_schedconf.cvmfs.json
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas   1511579 Apr  8 04:54 agis_ddmendpoints.agis.ALL.json
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas       435 Apr  8 04:54 workernode_map.json
[2026-04-08 07:39:21] drwx------ 5 boincer umatlas      4096 Apr  8 04:55 pilot3
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas 199290934 Apr  8 07:37 HITS.49263208._011926.pool.root.1
[2026-04-08 07:39:21] -rw-r--r-- 1 boincer umatlas      5950 Apr  8 07:38 init_data.xml
[2026-04-08 07:39:21] -rw-r--r-- 1 boincer umatlas       529 Apr  8 07:38 boinc_task_state.xml
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas      1049 Apr  8 07:38 memory_monitor_summary.json
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas    340242 Apr  8 07:38 log.49263208._011926.job.log.tgz.1
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas      6427 Apr  8 07:38 heartbeat_new.json
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas      6318 Apr  8 07:38 heartbeat.json
[2026-04-08 07:39:21] -rw-r--r-- 1 boincer umatlas        27 Apr  8 07:38 wrapper_checkpoint.txt
[2026-04-08 07:39:21] -rw-r--r-- 1 boincer umatlas      8192 Apr  8 07:38 boinc_mmap_file
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas        95 Apr  8 07:39 pilot_heartbeat.json
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas      4816 Apr  8 07:39 pilotlog.txt
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas    922605 Apr  8 07:39 log.49263208._011926.job.log.1
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas       357 Apr  8 07:39 output.list
[2026-04-08 07:39:21] -rw-r--r-- 1 boincer umatlas       620 Apr  8 07:39 runtime_log
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas   1280000 Apr  8 07:39 result.tar.gz
[2026-04-08 07:39:21] -rw-r--r-- 1 boincer umatlas      9341 Apr  8 07:39 runtime_log.err
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas       659 Apr  8 07:39 CopLDmRFhR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDm3EQKDmFE8SKm.diag
[2026-04-08 07:39:21] -rw-r--r-- 1 boincer umatlas     20965 Apr  8 07:39 stderr.txt
[2026-04-08 07:39:21] HITS file was successfully produced:
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas 199290934 Apr  8 07:37 shared/HITS.pool.root.1
[2026-04-08 07:39:21]  *** Contents of shared directory: ***
[2026-04-08 07:39:21] total 413708
[2026-04-08 07:39:21] -rw-r--r-- 2 boincer umatlas 222379858 Apr  8 04:54 ATLAS.root_0
[2026-04-08 07:39:21] -rw-r--r-- 2 boincer umatlas     15845 Apr  8 04:54 start_atlas.sh
[2026-04-08 07:39:21] -rw-r--r-- 2 boincer umatlas    656747 Apr  8 04:54 input.tar.gz
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas 199290934 Apr  8 07:37 HITS.pool.root.1
[2026-04-08 07:39:21] -rw------- 1 boincer umatlas   1280000 Apr  8 07:39 result.tar.gz
07:39:23 (8648): run_atlas exited; CPU time 74402.384664
07:39:23 (8648): called boinc_finish(0)

</stderr_txt>
]]>

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