Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:18:40 (25104): wrapper (7.7.26015): starting
02:18:40 (25104): wrapper: running run_atlas (--nthreads 8)
[2026-04-07 02:18:40] Arguments: --nthreads 8
[2026-04-07 02:18:40] Threads: 8
[2026-04-07 02:18:40] Checking for CVMFS
[2026-04-07 02:18:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-07 02:18:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-07 02:18:40] Running cvmfs_config stat atlas.cern.ch
[2026-04-07 02:18:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-07 02:18:41] 2.11.2.0 2701 250109 89544 158173 3 1 16812650 20275201 1 130560 0 61841670 99.907 11558617 23848 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-07 02:18:41] CVMFS is ok
[2026-04-07 02:18:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-07 02:18:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-07 02:18:41] Further information can be found at the LHC@home message board.
[2026-04-07 02:18:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-07 02:18:41] Checking for apptainer binary...
[2026-04-07 02:18:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-07 02:18:41] Running /usr/bin/apptainer --version
[2026-04-07 02:18:41] apptainer version 1.3.2-1.el7
[2026-04-07 02:18:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-07 02:18:43] c-204-1.aglt2.org
[2026-04-07 02:18:43] apptainer works
[2026-04-07 02:18:43] Set ATHENA_PROC_NUMBER=8
[2026-04-07 02:18:43] Set ATHENA_CORE_NUMBER=8
[2026-04-07 02:18:43] Starting ATLAS job with PandaID=7072088646
[2026-04-07 02:18:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:47:58 (14928): wrapper (7.7.26015): starting
02:47:58 (14928): wrapper: running run_atlas (--nthreads 8)
[2026-04-07 02:47:58] Arguments: --nthreads 8
[2026-04-07 02:47:58] Threads: 8
[2026-04-07 02:47:58] This job has been restarted, cleaning up previous attempt
[2026-04-07 02:47:59] Checking for CVMFS
[2026-04-07 02:47:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-07 02:47:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-07 02:47:59] Running cvmfs_config stat atlas.cern.ch
[2026-04-07 02:48:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-07 02:48:00] 2.11.2.0 2701 250138 89956 158173 1 188 16875026 20275201 1 130560 0 61906997 99.907 11560151 23848 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-07 02:48:00] CVMFS is ok
[2026-04-07 02:48:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-07 02:48:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-07 02:48:00] Further information can be found at the LHC@home message board.
[2026-04-07 02:48:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-07 02:48:00] Checking for apptainer binary...
[2026-04-07 02:48:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-07 02:48:00] Running /usr/bin/apptainer --version
[2026-04-07 02:48:00] apptainer version 1.3.2-1.el7
[2026-04-07 02:48:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-07 02:48:01] c-204-1.aglt2.org
[2026-04-07 02:48:01] apptainer works
[2026-04-07 02:48:02] Set ATHENA_PROC_NUMBER=8
[2026-04-07 02:48:02] Set ATHENA_CORE_NUMBER=8
[2026-04-07 02:48:02] Starting ATLAS job with PandaID=7072088646
[2026-04-07 02:48:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-07 04:58:40]  *** The last 200 lines of the pilot log: ***
[2026-04-07 04:58:40] 2026-04-07 08:58:04,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-07 04:58:40] 2026-04-07 08:58:05,505 | INFO     | time since job start (7783s) is within the limit (345600.0s)
[2026-04-07 04:58:40] 2026-04-07 08:58:06,177 | INFO     | job 7072088646 has state=finished
[2026-04-07 04:58:40] 2026-04-07 08:58:06,178 | INFO     | preparing for final server update for job 7072088646 in state='finished'
[2026-04-07 04:58:40] 2026-04-07 08:58:06,278 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-07 04:58:40] 2026-04-07 08:58:06,279 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7072088646/jobReport.json
[2026-04-07 04:58:40] 2026-04-07 08:58:06,282 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-07 04:58:40] 2026-04-07 08:58:06,282 | INFO     | this job has now completed (state=finished)
[2026-04-07 04:58:40] 2026-04-07 08:58:06,282 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-07 04:58:40] 2026-04-07 08:58:06,283 | INFO     | log transfer has been attempted: DONE
[2026-04-07 04:58:40] 2026-04-07 08:58:06,283 | INFO     | job 7072088646 has finished - writing final server update
[2026-04-07 04:58:40] 2026-04-07 08:58:06,283 | INFO     | total number of processed events: 400 (read)
[2026-04-07 04:58:40] 2026-04-07 08:58:06,285 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7072088646/memory_monitor_summary.json (trf name=prmon)
[2026-04-07 04:58:40] 2026-04-07 08:58:06,285 | INFO     | extracted standard info from prmon json
[2026-04-07 04:58:40] 2026-04-07 08:58:06,285 | INFO     | extracted standard memory fields from prmon json
[2026-04-07 04:58:40] 2026-04-07 08:58:06,286 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-07 04:58:40] 2026-04-07 08:58:06,286 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-07 04:58:40] 2026-04-07 08:58:06,286 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-07 04:58:40] 2026-04-07 08:58:06,288 | INFO     | fitting pss+swap vs Time
[2026-04-07 04:58:40] 2026-04-07 08:58:06,289 | INFO     | sum of square deviations: 635130048.0
[2026-04-07 04:58:40] 2026-04-07 08:58:06,289 | INFO     | sum of deviations: 7047607855.000002
[2026-04-07 04:58:40] 2026-04-07 08:58:06,289 | INFO     | mean x: 1775548380.0
[2026-04-07 04:58:40] 2026-04-07 08:58:06,290 | INFO     | mean y: 2507920.3385826773
[2026-04-07 04:58:40] 2026-04-07 08:58:06,290 | INFO     | intersect: -19699549554.70081
[2026-04-07 04:58:40] 2026-04-07 08:58:06,290 | INFO     | chi2: 1.641515369633589
[2026-04-07 04:58:40] 2026-04-07 08:58:06,290 | INFO     | sum of square deviations: 563026370.5
[2026-04-07 04:58:40] 2026-04-07 08:58:06,291 | INFO     | sum of deviations: 6802578480.00001
[2026-04-07 04:58:40] 2026-04-07 08:58:06,291 | INFO     | mean x: 1775548227.5
[2026-04-07 04:58:40] 2026-04-07 08:58:06,291 | INFO     | mean y: 2507401.8360655736
[2026-04-07 04:58:40] 2026-04-07 08:58:06,291 | INFO     | intersect: -21449962314.400185
[2026-04-07 04:58:40] 2026-04-07 08:58:06,291 | INFO     | chi2: 1.6437323972998854
[2026-04-07 04:58:40] 2026-04-07 08:58:06,292 | INFO     | current chi2=1.6437323972998854 (change=-0.13505981773362102 %)
[2026-04-07 04:58:40] 2026-04-07 08:58:06,292 | INFO     | right removable region: 121
[2026-04-07 04:58:40] 2026-04-07 08:58:06,292 | INFO     | sum of square deviations: 563026370.5
[2026-04-07 04:58:40] 2026-04-07 08:58:06,292 | INFO     | sum of deviations: -12218581575.999998
[2026-04-07 04:58:40] 2026-04-07 08:58:06,293 | INFO     | mean x: 1775548532.5
[2026-04-07 04:58:40] 2026-04-07 08:58:06,293 | INFO     | mean y: 2547917.0327868853
[2026-04-07 04:58:40] 2026-04-07 08:58:06,293 | INFO     | intersect: 38534818736.30578
[2026-04-07 04:58:40] 2026-04-07 08:58:06,293 | INFO     | chi2: 0.12410802494648697
[2026-04-07 04:58:40] 2026-04-07 08:58:06,293 | INFO     | current chi2=0.12410802494648697 (change=92.43942352034207 %)
[2026-04-07 04:58:40] 2026-04-07 08:58:06,294 | INFO     | sum of square deviations: 496597218.0
[2026-04-07 04:58:40] 2026-04-07 08:58:06,294 | INFO     | sum of deviations: -11059836311.999998
[2026-04-07 04:58:40] 2026-04-07 08:58:06,294 | INFO     | mean x: 1775548685.0
[2026-04-07 04:58:40] 2026-04-07 08:58:06,294 | INFO     | mean y: 2545121.5982905985
[2026-04-07 04:58:40] 2026-04-07 08:58:06,294 | INFO     | intersect: 39546217756.68511
[2026-04-07 04:58:40] 2026-04-07 08:58:06,295 | INFO     | chi2: 0.10725255431219799
[2026-04-07 04:58:40] 2026-04-07 08:58:06,295 | INFO     | current chi2=0.10725255431219799 (change=13.581289881582387 %)
[2026-04-07 04:58:40] 2026-04-07 08:58:06,295 | INFO     | left removable region: 20
[2026-04-07 04:58:40] 2026-04-07 08:58:06,295 | INFO     | sum of square deviations: 319447850.0
[2026-04-07 04:58:40] 2026-04-07 08:58:06,296 | INFO     | sum of deviations: -2689801587.9999995
[2026-04-07 04:58:40] 2026-04-07 08:58:06,296 | INFO     | mean x: 1775548807.0
[2026-04-07 04:58:40] 2026-04-07 08:58:06,296 | INFO     | mean y: 2523471.118811881
[2026-04-07 04:58:40] 2026-04-07 08:58:06,296 | INFO     | intersect: 14952926175.78596
[2026-04-07 04:58:40] 2026-04-07 08:58:06,296 | INFO     | chi2: 0.053954837969985674
[2026-04-07 04:58:40] 2026-04-07 08:58:06,296 | INFO     | current memory leak: -8.42 B/s (using 101 data points, chi2=0.05)
[2026-04-07 04:58:40] 2026-04-07 08:58:06,297 | INFO     | could have reported an average CPU frequency of 1679 MHz (8 samples)
[2026-04-07 04:58:40] 2026-04-07 08:58:06,297 | INFO     | ..............................
[2026-04-07 04:58:40] 2026-04-07 08:58:06,297 | INFO     | . Timing measurements:
[2026-04-07 04:58:40] 2026-04-07 08:58:06,297 | INFO     | . get job = 0 s
[2026-04-07 04:58:40] 2026-04-07 08:58:06,297 | INFO     | . initial setup = 1 s
[2026-04-07 04:58:40] 2026-04-07 08:58:06,297 | INFO     | . payload setup = 17 s
[2026-04-07 04:58:40] 2026-04-07 08:58:06,297 | INFO     | . stage-in = 0 s
[2026-04-07 04:58:40] 2026-04-07 08:58:06,298 | INFO     | . payload execution = 7747 s
[2026-04-07 04:58:40] 2026-04-07 08:58:06,298 | INFO     | . stage-out = 0 s
[2026-04-07 04:58:40] 2026-04-07 08:58:06,298 | INFO     | . log creation = 0 s
[2026-04-07 04:58:40] 2026-04-07 08:58:06,298 | INFO     | ..............................
[2026-04-07 04:58:40] 2026-04-07 08:58:06,380 | INFO     | 
[2026-04-07 04:58:40] 2026-04-07 08:58:06,380 | INFO     | job summary report
[2026-04-07 04:58:40] 2026-04-07 08:58:06,380 | INFO     | --------------------------------------------------
[2026-04-07 04:58:40] 2026-04-07 08:58:06,380 | INFO     | PanDA job id: 7072088646
[2026-04-07 04:58:40] 2026-04-07 08:58:06,380 | INFO     | task id: 49263200
[2026-04-07 04:58:40] 2026-04-07 08:58:06,381 | INFO     | errors: (none)
[2026-04-07 04:58:40] 2026-04-07 08:58:06,381 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-07 04:58:40] 2026-04-07 08:58:06,381 | INFO     | pilot state: finished 
[2026-04-07 04:58:40] 2026-04-07 08:58:06,381 | INFO     | transexitcode: 0
[2026-04-07 04:58:40] 2026-04-07 08:58:06,381 | INFO     | exeerrorcode: 0
[2026-04-07 04:58:40] 2026-04-07 08:58:06,381 | INFO     | exeerrordiag: 
[2026-04-07 04:58:40] 2026-04-07 08:58:06,381 | INFO     | exitcode: 0
[2026-04-07 04:58:40] 2026-04-07 08:58:06,381 | INFO     | exitmsg: OK
[2026-04-07 04:58:40] 2026-04-07 08:58:06,382 | INFO     | cpuconsumptiontime: 57001 s
[2026-04-07 04:58:40] 2026-04-07 08:58:06,382 | INFO     | nevents: 400
[2026-04-07 04:58:40] 2026-04-07 08:58:06,382 | INFO     | neventsw: 0
[2026-04-07 04:58:40] 2026-04-07 08:58:06,382 | INFO     | pid: 21508
[2026-04-07 04:58:40] 2026-04-07 08:58:06,382 | INFO     | pgrp: 21508
[2026-04-07 04:58:40] 2026-04-07 08:58:06,382 | INFO     | corecount: 8
[2026-04-07 04:58:40] 2026-04-07 08:58:06,382 | INFO     | event service: False
[2026-04-07 04:58:40] 2026-04-07 08:58:06,382 | INFO     | sizes: {0: 2279753, 1: 2280270, 12: 2280270, 7768: 2308003, 7769: 2308002, 7770: 2317056, 7771: 2317240, 7772: 2317434}
[2026-04-07 04:58:40] 2026-04-07 08:58:06,382 | INFO     | --------------------------------------------------
[2026-04-07 04:58:40] 2026-04-07 08:58:06,383 | INFO     | 
[2026-04-07 04:58:40] 2026-04-07 08:58:06,383 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-07 04:58:40] 2026-04-07 08:58:06,412 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,412 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,413 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,413 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,416 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-07 04:58:40] 2026-04-07 08:58:06,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,416 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-07 04:58:40] 2026-04-07 08:58:06,416 | INFO     | job 7072088646 has completed (purged errors)
[2026-04-07 04:58:40] 2026-04-07 08:58:06,417 | INFO     | overall cleanup function is called
[2026-04-07 04:58:40] 2026-04-07 08:58:07,425 | INFO     | --- collectZombieJob: --- 10, [21508]
[2026-04-07 04:58:40] 2026-04-07 08:58:07,426 | INFO     | zombie collector waiting for pid 21508
[2026-04-07 04:58:40] 2026-04-07 08:58:07,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-07 04:58:40] 2026-04-07 08:58:07,426 | INFO     | collected zombie processes
[2026-04-07 04:58:40] 2026-04-07 08:58:07,427 | INFO     | will attempt to kill all subprocesses of pid=21508
[2026-04-07 04:58:40] 2026-04-07 08:58:07,506 | INFO     | process IDs to be killed: [21508] (in reverse order)
[2026-04-07 04:58:40] 2026-04-07 08:58:07,560 | WARNING  | found no corresponding commands to process id(s)
[2026-04-07 04:58:40] 2026-04-07 08:58:07,561 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-07 04:58:40] 2026-04-07 08:58:07,564 | INFO     | did not find any defunct processes belonging to 21508
[2026-04-07 04:58:40] 2026-04-07 08:58:07,567 | INFO     | did not find any defunct processes belonging to 21508
[2026-04-07 04:58:40] 2026-04-07 08:58:07,567 | INFO     | ready for new job
[2026-04-07 04:58:40] 2026-04-07 08:58:07,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-07 04:58:40] 2026-04-07 08:58:07,569 | INFO     | **************************************
[2026-04-07 04:58:40] 2026-04-07 08:58:07,570 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-07 04:58:40] 2026-04-07 08:58:07,570 | INFO     | **************************************
[2026-04-07 04:58:40] 2026-04-07 08:58:07,570 | INFO     | 
[2026-04-07 04:58:40] 2026-04-07 08:58:07,570 | INFO     | architecture information:
[2026-04-07 04:58:40] 2026-04-07 08:58:07,571 | INFO     | executing command: cat /etc/os-release
[2026-04-07 04:58:40] 2026-04-07 08:58:07,592 | INFO     | cat /etc/os-release:
[2026-04-07 04:58:40] NAME="CentOS Linux"
[2026-04-07 04:58:40] VERSION="7 (Core)"
[2026-04-07 04:58:40] ID="centos"
[2026-04-07 04:58:40] ID_LIKE="rhel fedora"
[2026-04-07 04:58:40] VERSION_ID="7"
[2026-04-07 04:58:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-07 04:58:40] ANSI_COLOR="0;31"
[2026-04-07 04:58:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-07 04:58:40] HOME_URL="https://www.centos.org/"
[2026-04-07 04:58:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-07 04:58:40] 
[2026-04-07 04:58:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-07 04:58:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-07 04:58:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-07 04:58:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-07 04:58:40] 
[2026-04-07 04:58:40] 2026-04-07 08:58:07,592 | INFO     | **************************************
[2026-04-07 04:58:40] 2026-04-07 08:58:08,096 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-07 04:58:40] 2026-04-07 08:58:08,117 | INFO     | sufficient remaining disk space (18544066560 B)
[2026-04-07 04:58:40] 2026-04-07 08:58:08,117 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-07 04:58:40] 2026-04-07 08:58:08,117 | INFO     | current server update state: UPDATING_FINAL
[2026-04-07 04:58:40] 2026-04-07 08:58:08,118 | INFO     | update_server=False
[2026-04-07 04:58:40] 2026-04-07 08:58:08,118 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-07 04:58:40] 2026-04-07 08:58:08,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-07 04:58:40] 2026-04-07 08:58:08,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-07 04:58:40] 2026-04-07 08:58:08,119 | INFO     | aborting loop
[2026-04-07 04:58:40] 2026-04-07 08:58:08,752 | INFO     | all job control threads have been joined
[2026-04-07 04:58:40] 2026-04-07 08:58:08,867 | INFO     | all payload control threads have been joined
[2026-04-07 04:58:40] 2026-04-07 08:58:09,035 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-07 04:58:40] 2026-04-07 08:58:09,060 | INFO     | all data control threads have been joined
[2026-04-07 04:58:40] 2026-04-07 08:58:09,124 | INFO     | [job] retrieve thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:09,125 | INFO     | [job] job monitor thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:09,126 | INFO     | [job] queue monitor thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:09,364 | INFO     | [payload] failed_post thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:09,738 | INFO     | [job] validate thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:09,747 | INFO     | [job] create_data_payload thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:09,758 | INFO     | [job] control thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:09,818 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:09,872 | INFO     | [payload] control thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:09,932 | INFO     | [payload] validate_post thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:10,066 | INFO     | [data] control thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:10,372 | INFO     | [data] copytool_in thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:10,397 | INFO     | [payload] validate_pre thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:10,410 | INFO     | [payload] execute_payloads thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:10,467 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-07 04:58:40] 2026-04-07 08:58:11,041 | INFO     | [data] copytool_out thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:14,473 | INFO     | [data] queue_monitor thread has finished
[2026-04-07 04:58:40] 2026-04-07 08:58:34,303 | INFO     | [monitor] cgroup control has ended
[2026-04-07 04:58:40] 2026-04-07 08:58:35,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139778033223488)>', '<ExcThread(monitor, started 139777068222208)>']
[2026-04-07 04:58:40] 2026-04-07 08:58:38,699 | INFO     | PID=19041 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-07 04:58:40] 2026-04-07 08:58:38,699 | INFO     | found 0 job(s) in 20 queues
[2026-04-07 04:58:40] 2026-04-07 08:58:38,699 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-07 04:58:40] 2026-04-07 08:58:38,699 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-07 04:58:40] 2026-04-07 08:58:38,699 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-07 04:58:40] 2026-04-07 08:58:38,699 | INFO     | [monitor] control thread has ended
[2026-04-07 04:58:40] 2026-04-07 08:58:40,335 | INFO     | all workflow threads have been joined
[2026-04-07 04:58:40] 2026-04-07 08:58:40,336 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-07 04:58:40] 2026-04-07 08:58:40,336 | INFO     | traces error code: 0
[2026-04-07 04:58:40] 2026-04-07 08:58:40,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-07 04:58:40] 2026-04-07 08:58:40,448 [wrapper] ==== pilot stdout END ====
[2026-04-07 04:58:40] 2026-04-07 08:58:40,453 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-07 04:58:40] 2026-04-07 08:58:40,459 [wrapper] pilotpid: 19041
[2026-04-07 04:58:40] 2026-04-07 08:58:40,464 [wrapper] Pilot exit status: 0
[2026-04-07 04:58:40] 2026-04-07 08:58:40,485 [wrapper] pandaids: 7072088646 7072088646
[2026-04-07 04:58:40] 2026-04-07 08:58:40,526 [wrapper] cleanup supervisor_pilot 32495 19042
[2026-04-07 04:58:40] 2026-04-07 08:58:40,531 [wrapper] Test setup, not cleaning
[2026-04-07 04:58:40] 2026-04-07 08:58:40,536 [wrapper] apfmon messages muted
[2026-04-07 04:58:40] 2026-04-07 08:58:40,541 [wrapper] ==== wrapper stdout END ====
[2026-04-07 04:58:40] 2026-04-07 08:58:40,546 [wrapper] ==== wrapper stderr END ====
[2026-04-07 04:58:40]  *** Error codes and diagnostics ***
[2026-04-07 04:58:40]     "exeErrorCode": 0,
[2026-04-07 04:58:40]     "exeErrorDiag": "",
[2026-04-07 04:58:40]     "pilotErrorCode": 0,
[2026-04-07 04:58:40]     "pilotErrorDiag": "",
[2026-04-07 04:58:40]  *** Listing of results directory ***
[2026-04-07 04:58:40] total 633624
[2026-04-07 04:58:40] drwx------ 5 boincer boincer      4096 Mar 10 12:00 pilot3
[2026-04-07 04:58:40] -rw-r--r-- 1 boincer boincer    585013 Mar 29 22:42 pilot3.tar.gz
[2026-04-07 04:58:40] -rw-r--r-- 1 boincer boincer      5118 Mar 29 22:47 queuedata.json
[2026-04-07 04:58:40] -rwx------ 1 boincer boincer     36322 Mar 29 22:47 runpilot2-wrapper.sh
[2026-04-07 04:58:40] -rw-r--r-- 1 boincer boincer       100 Apr  7 02:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-07 04:58:40] -rwxr-xr-x 1 boincer boincer      7986 Apr  7 02:18 run_atlas
[2026-04-07 04:58:40] -rw-r--r-- 1 boincer boincer       105 Apr  7 02:18 job.xml
[2026-04-07 04:58:40] -rw-r--r-- 3 boincer boincer 223224590 Apr  7 02:18 EVNT.49263198._000293.pool.root.1
[2026-04-07 04:58:40] -rw-r--r-- 3 boincer boincer 223224590 Apr  7 02:18 ATLAS.root_0
[2026-04-07 04:58:40] -rw-r--r-- 2 boincer boincer     15845 Apr  7 02:18 start_atlas.sh
[2026-04-07 04:58:40] drwxrwx--x 2 boincer boincer      4096 Apr  7 02:18 shared
[2026-04-07 04:58:40] -rw-r--r-- 2 boincer boincer    597541 Apr  7 02:18 input.tar.gz
[2026-04-07 04:58:40] -rw-r--r-- 1 boincer boincer         0 Apr  7 02:18 boinc_lockfile
[2026-04-07 04:58:40] -rw------- 1 boincer boincer   1511579 Apr  7 02:19 agis_ddmendpoints.agis.ALL.json
[2026-04-07 04:58:40] -rw-r--r-- 1 boincer boincer      2570 Apr  7 02:48 pandaJob.out
[2026-04-07 04:58:40] -rw------- 1 boincer boincer        57 Apr  7 02:48 setup.sh.local
[2026-04-07 04:58:40] -rw------- 1 boincer boincer   1005396 Apr  7 02:48 agis_schedconf.cvmfs.json
[2026-04-07 04:58:40] -rw------- 1 boincer boincer       432 Apr  7 02:48 workernode_map.json
[2026-04-07 04:58:40] -rw-r--r-- 1 boincer boincer      5909 Apr  7 04:56 init_data.xml
[2026-04-07 04:58:40] -rw------- 1 boincer boincer 195507250 Apr  7 04:57 HITS.49263200._007301.pool.root.1
[2026-04-07 04:58:40] -rw-r--r-- 1 boincer boincer       529 Apr  7 04:57 boinc_task_state.xml
[2026-04-07 04:58:40] -rw------- 1 boincer boincer        96 Apr  7 04:57 pilot_heartbeat.json
[2026-04-07 04:58:40] -rw------- 1 boincer boincer      1052 Apr  7 04:57 memory_monitor_summary.json
[2026-04-07 04:58:40] -rw------- 1 boincer boincer    359354 Apr  7 04:58 log.49263200._007301.job.log.tgz.1
[2026-04-07 04:58:40] -rw------- 1 boincer boincer      6398 Apr  7 04:58 heartbeat.json
[2026-04-07 04:58:40] -rw-r--r-- 1 boincer boincer      8192 Apr  7 04:58 boinc_mmap_file
[2026-04-07 04:58:40] -rw-r--r-- 1 boincer boincer        27 Apr  7 04:58 wrapper_checkpoint.txt
[2026-04-07 04:58:40] -rw------- 1 boincer boincer      4742 Apr  7 04:58 pilotlog.txt
[2026-04-07 04:58:40] -rw------- 1 boincer boincer   1102887 Apr  7 04:58 log.49263200._007301.job.log.1
[2026-04-07 04:58:40] -rw------- 1 boincer boincer       357 Apr  7 04:58 output.list
[2026-04-07 04:58:40] -rw-r--r-- 1 boincer boincer       620 Apr  7 04:58 runtime_log
[2026-04-07 04:58:40] -rw------- 1 boincer boincer   1484800 Apr  7 04:58 result.tar.gz
[2026-04-07 04:58:40] -rw-r--r-- 1 boincer boincer      9421 Apr  7 04:58 runtime_log.err
[2026-04-07 04:58:40] -rw------- 1 boincer boincer       783 Apr  7 04:58 R5sMDmMqHR9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmINMKDmhQDERo.diag
[2026-04-07 04:58:40] -rw-r--r-- 1 boincer boincer     23448 Apr  7 04:58 stderr.txt
[2026-04-07 04:58:40] HITS file was successfully produced:
[2026-04-07 04:58:40] -rw------- 1 boincer boincer 195507250 Apr  7 04:57 shared/HITS.pool.root.1
[2026-04-07 04:58:40]  *** Contents of shared directory: ***
[2026-04-07 04:58:40] total 410980
[2026-04-07 04:58:40] -rw-r--r-- 3 boincer boincer 223224590 Apr  7 02:18 ATLAS.root_0
[2026-04-07 04:58:40] -rw-r--r-- 2 boincer boincer     15845 Apr  7 02:18 start_atlas.sh
[2026-04-07 04:58:40] -rw-r--r-- 2 boincer boincer    597541 Apr  7 02:18 input.tar.gz
[2026-04-07 04:58:40] -rw------- 1 boincer boincer 195507250 Apr  7 04:57 HITS.pool.root.1
[2026-04-07 04:58:40] -rw------- 1 boincer boincer   1484800 Apr  7 04:58 result.tar.gz
04:58:42 (14928): run_atlas exited; CPU time 56938.778731
04:58:42 (14928): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN