Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:03:51 (3031): wrapper (7.7.26015): starting
07:03:51 (3031): wrapper: running run_atlas (--nthreads 8)
[2026-04-07 07:03:51] Arguments: --nthreads 8
[2026-04-07 07:03:51] Threads: 8
[2026-04-07 07:03:51] Checking for CVMFS
[2026-04-07 07:03:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-07 07:03:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-07 07:03:54] Running cvmfs_config stat atlas.cern.ch
[2026-04-07 07:03:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-07 07:03:55] 2.11.2.0 19153 8128 96896 158170 0 105 13159667 25165824 541 130560 0 4413242 99.838 4074318 9227 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-07 07:03:55] CVMFS is ok
[2026-04-07 07:03:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-07 07:03:55] Checking for apptainer binary...
[2026-04-07 07:03:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-07 07:03:55] Running /usr/bin/apptainer --version
[2026-04-07 07:03:55] apptainer version 1.3.2-1.el7
[2026-04-07 07:03:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-07 07:04:24] cg-vwn472.simple-grid.lan
[2026-04-07 07:04:24] apptainer works
[2026-04-07 07:04:24] Set ATHENA_PROC_NUMBER=8
[2026-04-07 07:04:24] Set ATHENA_CORE_NUMBER=8
[2026-04-07 07:04:24] Starting ATLAS job with PandaID=7082842717
[2026-04-07 07:04:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-07 13:08:24]  *** The last 200 lines of the pilot log: ***
[2026-04-07 13:08:24] 2026-04-07 11:07:42,618 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-07 13:08:24] 2026-04-07 11:07:42,619 | INFO     | log transfer has been attempted: DONE
[2026-04-07 13:08:24] 2026-04-07 11:07:42,619 | INFO     | job 7082842717 has finished - writing final server update
[2026-04-07 13:08:24] 2026-04-07 11:07:42,619 | INFO     | total number of processed events: 400 (read)
[2026-04-07 13:08:24] 2026-04-07 11:07:42,621 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7082842717/memory_monitor_summary.json (trf name=prmon)
[2026-04-07 13:08:24] 2026-04-07 11:07:42,622 | INFO     | extracted standard info from prmon json
[2026-04-07 13:08:24] 2026-04-07 11:07:42,622 | INFO     | extracted standard memory fields from prmon json
[2026-04-07 13:08:24] 2026-04-07 11:07:42,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-07 13:08:24] 2026-04-07 11:07:42,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-07 13:08:24] 2026-04-07 11:07:42,629 | INFO     | fitting pss+swap vs Time
[2026-04-07 13:08:24] 2026-04-07 11:07:42,630 | INFO     | sum of square deviations: 12955770358.0
[2026-04-07 13:08:24] 2026-04-07 11:07:42,634 | INFO     | sum of deviations: 22109695707.999977
[2026-04-07 13:08:24] 2026-04-07 11:07:42,634 | INFO     | mean x (centered): 0.0
[2026-04-07 13:08:24] 2026-04-07 11:07:42,634 | INFO     | mean y: 2525084.1786743514
[2026-04-07 13:08:24] 2026-04-07 11:07:42,634 | INFO     | intersect: 2525084.1786743514
[2026-04-07 13:08:24] 2026-04-07 11:07:42,635 | INFO     | chi2: 3.0240593892862684
[2026-04-07 13:08:24] 2026-04-07 11:07:42,636 | INFO     | sum of square deviations: 12403750705.5
[2026-04-07 13:08:24] 2026-04-07 11:07:42,639 | INFO     | sum of deviations: 45154514797.50001
[2026-04-07 13:08:24] 2026-04-07 11:07:42,639 | INFO     | mean x (centered): 0.0
[2026-04-07 13:08:24] 2026-04-07 11:07:42,639 | INFO     | mean y: 2531375.441520468
[2026-04-07 13:08:24] 2026-04-07 11:07:42,640 | INFO     | intersect: 2531375.441520468
[2026-04-07 13:08:24] 2026-04-07 11:07:42,640 | INFO     | chi2: 2.2643683183168846
[2026-04-07 13:08:24] 2026-04-07 11:07:42,640 | INFO     | current chi2=2.2643683183168846 (change=25.12156585485196 %)
[2026-04-07 13:08:24] 2026-04-07 11:07:42,641 | INFO     | sum of square deviations: 11867638328.0
[2026-04-07 13:08:24] 2026-04-07 11:07:42,644 | INFO     | sum of deviations: 44446720908.999985
[2026-04-07 13:08:24] 2026-04-07 11:07:42,645 | INFO     | mean x (centered): 0.0
[2026-04-07 13:08:24] 2026-04-07 11:07:42,645 | INFO     | mean y: 2531174.0949554895
[2026-04-07 13:08:24] 2026-04-07 11:07:42,645 | INFO     | intersect: 2531174.0949554895
[2026-04-07 13:08:24] 2026-04-07 11:07:42,645 | INFO     | chi2: 2.2651353193271704
[2026-04-07 13:08:24] 2026-04-07 11:07:42,645 | INFO     | current chi2=2.2651353193271704 (change=-0.03387262593639945 %)
[2026-04-07 13:08:24] 2026-04-07 11:07:42,646 | INFO     | right removable region: 336
[2026-04-07 13:08:24] 2026-04-07 11:07:42,646 | INFO     | sum of square deviations: 12403750705.5
[2026-04-07 13:08:24] 2026-04-07 11:07:42,650 | INFO     | sum of deviations: -52092702347.0
[2026-04-07 13:08:24] 2026-04-07 11:07:42,650 | INFO     | mean x (centered): 0.0
[2026-04-07 13:08:24] 2026-04-07 11:07:42,650 | INFO     | mean y: 2545490.035087719
[2026-04-07 13:08:24] 2026-04-07 11:07:42,650 | INFO     | intersect: 2545490.035087719
[2026-04-07 13:08:24] 2026-04-07 11:07:42,651 | INFO     | chi2: 0.9308289453074781
[2026-04-07 13:08:24] 2026-04-07 11:07:42,651 | INFO     | current chi2=0.9308289453074781 (change=69.21922404681443 %)
[2026-04-07 13:08:24] 2026-04-07 11:07:42,651 | INFO     | sum of square deviations: 11867638328.0
[2026-04-07 13:08:24] 2026-04-07 11:07:42,655 | INFO     | sum of deviations: -63893959316.0
[2026-04-07 13:08:24] 2026-04-07 11:07:42,655 | INFO     | mean x (centered): 0.0
[2026-04-07 13:08:24] 2026-04-07 11:07:42,655 | INFO     | mean y: 2548846.6795252226
[2026-04-07 13:08:24] 2026-04-07 11:07:42,656 | INFO     | intersect: 2548846.6795252226
[2026-04-07 13:08:24] 2026-04-07 11:07:42,656 | INFO     | chi2: 0.8776490544330321
[2026-04-07 13:08:24] 2026-04-07 11:07:42,656 | INFO     | current chi2=0.8776490544330321 (change=5.713175459630685 %)
[2026-04-07 13:08:24] 2026-04-07 11:07:42,656 | INFO     | left removable region: 10
[2026-04-07 13:08:24] 2026-04-07 11:07:42,657 | INFO     | sum of square deviations: 10743038637.5
[2026-04-07 13:08:24] 2026-04-07 11:07:42,660 | INFO     | sum of deviations: -39631362243.0
[2026-04-07 13:08:24] 2026-04-07 11:07:42,660 | INFO     | mean x (centered): 0.0
[2026-04-07 13:08:24] 2026-04-07 11:07:42,660 | INFO     | mean y: 2555883.0674846624
[2026-04-07 13:08:24] 2026-04-07 11:07:42,660 | INFO     | intersect: 2555883.0674846624
[2026-04-07 13:08:24] 2026-04-07 11:07:42,661 | INFO     | chi2: 0.09840507481075457
[2026-04-07 13:08:24] 2026-04-07 11:07:42,661 | INFO     | current memory leak: -3.69 B/s (using 326 data points, chi2=0.10)
[2026-04-07 13:08:24] 2026-04-07 11:07:42,662 | INFO     | could have reported an average CPU frequency of 2249 MHz (15 samples)
[2026-04-07 13:08:24] 2026-04-07 11:07:42,662 | INFO     | ..............................
[2026-04-07 13:08:24] 2026-04-07 11:07:42,662 | INFO     | . Timing measurements:
[2026-04-07 13:08:24] 2026-04-07 11:07:42,662 | INFO     | . get job = 0 s
[2026-04-07 13:08:24] 2026-04-07 11:07:42,663 | INFO     | . initial setup = 108 s
[2026-04-07 13:08:24] 2026-04-07 11:07:42,663 | INFO     | . payload setup = 177 s
[2026-04-07 13:08:24] 2026-04-07 11:07:42,663 | INFO     | . stage-in = 0 s
[2026-04-07 13:08:24] 2026-04-07 11:07:42,663 | INFO     | . payload execution = 21225 s
[2026-04-07 13:08:24] 2026-04-07 11:07:42,663 | INFO     | . stage-out = 1 s
[2026-04-07 13:08:24] 2026-04-07 11:07:42,663 | INFO     | . log creation = 0 s
[2026-04-07 13:08:24] 2026-04-07 11:07:42,663 | INFO     | ..............................
[2026-04-07 13:08:24] 2026-04-07 11:07:43,159 | INFO     | 
[2026-04-07 13:08:24] 2026-04-07 11:07:43,159 | INFO     | job summary report
[2026-04-07 13:08:24] 2026-04-07 11:07:43,159 | INFO     | --------------------------------------------------
[2026-04-07 13:08:24] 2026-04-07 11:07:43,159 | INFO     | PanDA job id: 7082842717
[2026-04-07 13:08:24] 2026-04-07 11:07:43,160 | INFO     | task id: 49515477
[2026-04-07 13:08:24] 2026-04-07 11:07:43,160 | INFO     | errors: (none)
[2026-04-07 13:08:24] 2026-04-07 11:07:43,160 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-07 13:08:24] 2026-04-07 11:07:43,160 | INFO     | pilot state: finished 
[2026-04-07 13:08:24] 2026-04-07 11:07:43,160 | INFO     | transexitcode: 0
[2026-04-07 13:08:24] 2026-04-07 11:07:43,160 | INFO     | exeerrorcode: 0
[2026-04-07 13:08:24] 2026-04-07 11:07:43,160 | INFO     | exeerrordiag: 
[2026-04-07 13:08:24] 2026-04-07 11:07:43,161 | INFO     | exitcode: 0
[2026-04-07 13:08:24] 2026-04-07 11:07:43,161 | INFO     | exitmsg: OK
[2026-04-07 13:08:24] 2026-04-07 11:07:43,161 | INFO     | cpuconsumptiontime: 160046 s
[2026-04-07 13:08:24] 2026-04-07 11:07:43,161 | INFO     | nevents: 400
[2026-04-07 13:08:24] 2026-04-07 11:07:43,161 | INFO     | neventsw: 0
[2026-04-07 13:08:24] 2026-04-07 11:07:43,161 | INFO     | pid: 11614
[2026-04-07 13:08:24] 2026-04-07 11:07:43,161 | INFO     | pgrp: 11614
[2026-04-07 13:08:24] 2026-04-07 11:07:43,161 | INFO     | corecount: 8
[2026-04-07 13:08:24] 2026-04-07 11:07:43,161 | INFO     | event service: False
[2026-04-07 13:08:24] 2026-04-07 11:07:43,162 | INFO     | sizes: {0: 2279730, 1: 2238243, 2: 2281615, 12: 2281643, 21405: 2315485, 21407: 2324483, 21408: 2324861}
[2026-04-07 13:08:24] 2026-04-07 11:07:43,162 | INFO     | --------------------------------------------------
[2026-04-07 13:08:24] 2026-04-07 11:07:43,162 | INFO     | 
[2026-04-07 13:08:24] 2026-04-07 11:07:43,162 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-07 13:08:24] 2026-04-07 11:07:43,206 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,206 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,207 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,207 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,207 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,207 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,207 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,207 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,208 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,208 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,208 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,208 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,208 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,208 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,208 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-07 13:08:24] 2026-04-07 11:07:43,209 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,209 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-07 13:08:24] 2026-04-07 11:07:43,209 | INFO     | job 7082842717 has completed (purged errors)
[2026-04-07 13:08:24] 2026-04-07 11:07:43,209 | INFO     | overall cleanup function is called
[2026-04-07 13:08:24] 2026-04-07 11:07:44,217 | INFO     | --- collectZombieJob: --- 10, [11614]
[2026-04-07 13:08:24] 2026-04-07 11:07:44,217 | INFO     | zombie collector waiting for pid 11614
[2026-04-07 13:08:24] 2026-04-07 11:07:44,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-07 13:08:24] 2026-04-07 11:07:44,218 | INFO     | collected zombie processes
[2026-04-07 13:08:24] 2026-04-07 11:07:44,218 | INFO     | will attempt to kill all subprocesses of pid=11614
[2026-04-07 13:08:24] 2026-04-07 11:07:44,323 | INFO     | process IDs to be killed: [11614] (in reverse order)
[2026-04-07 13:08:24] 2026-04-07 11:07:44,391 | WARNING  | found no corresponding commands to process id(s)
[2026-04-07 13:08:24] 2026-04-07 11:07:44,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-07 13:08:24] 2026-04-07 11:07:44,394 | INFO     | did not find any defunct processes belonging to 11614
[2026-04-07 13:08:24] 2026-04-07 11:07:44,397 | INFO     | did not find any defunct processes belonging to 11614
[2026-04-07 13:08:24] 2026-04-07 11:07:44,398 | INFO     | Ready for new job
[2026-04-07 13:08:24] 2026-04-07 11:07:44,400 | INFO     | **************************************
[2026-04-07 13:08:24] 2026-04-07 11:07:44,400 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-07 13:08:24] 2026-04-07 11:07:44,400 | INFO     | **************************************
[2026-04-07 13:08:24] 2026-04-07 11:07:44,400 | INFO     | 
[2026-04-07 13:08:24] 2026-04-07 11:07:44,401 | INFO     | pilot is running in a VM
[2026-04-07 13:08:24] 2026-04-07 11:07:44,401 | INFO     | architecture information:
[2026-04-07 13:08:24] 2026-04-07 11:07:44,401 | INFO     | executing command: cat /etc/os-release
[2026-04-07 13:08:24] 2026-04-07 11:07:44,427 | INFO     | cat /etc/os-release:
[2026-04-07 13:08:24] NAME="CentOS Linux"
[2026-04-07 13:08:24] VERSION="7 (Core)"
[2026-04-07 13:08:24] ID="centos"
[2026-04-07 13:08:24] ID_LIKE="rhel fedora"
[2026-04-07 13:08:24] VERSION_ID="7"
[2026-04-07 13:08:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-07 13:08:24] ANSI_COLOR="0;31"
[2026-04-07 13:08:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-07 13:08:24] HOME_URL="https://www.centos.org/"
[2026-04-07 13:08:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-07 13:08:24] 
[2026-04-07 13:08:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-07 13:08:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-07 13:08:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-07 13:08:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-07 13:08:24] 
[2026-04-07 13:08:24] 2026-04-07 11:07:44,427 | INFO     | **************************************
[2026-04-07 13:08:24] 2026-04-07 11:07:44,930 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-07 13:08:24] 2026-04-07 11:07:44,947 | INFO     | sufficient remaining disk space (497464377344 B)
[2026-04-07 13:08:24] 2026-04-07 11:07:44,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-07 13:08:24] 2026-04-07 11:07:44,948 | INFO     | current server update state: UPDATING_FINAL
[2026-04-07 13:08:24] 2026-04-07 11:07:44,948 | INFO     | update_server=False
[2026-04-07 13:08:24] 2026-04-07 11:07:44,948 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-07 13:08:24] 2026-04-07 11:07:44,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-07 13:08:24] 2026-04-07 11:07:44,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-07 13:08:24] 2026-04-07 11:07:45,236 | INFO     | all payload control threads have been joined
[2026-04-07 13:08:24] 2026-04-07 11:07:45,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-07 13:08:24] 2026-04-07 11:07:45,503 | INFO     | aborting loop
[2026-04-07 13:08:24] 2026-04-07 11:07:45,762 | INFO     | all data control threads have been joined
[2026-04-07 13:08:24] 2026-04-07 11:07:45,953 | INFO     | [job] retrieve thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:45,985 | INFO     | [payload] validate_post thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:46,035 | INFO     | [payload] validate_pre thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:46,163 | INFO     | [job] validate thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:46,242 | INFO     | [payload] control thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:46,281 | INFO     | [data] copytool_in thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:46,446 | INFO     | [payload] failed_post thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:46,510 | INFO     | [job] job monitor thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:46,623 | INFO     | all job control threads have been joined
[2026-04-07 13:08:24] 2026-04-07 11:07:46,767 | INFO     | [data] control thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:46,952 | INFO     | [data] copytool_out thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:47,071 | INFO     | [payload] execute_payloads thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:47,408 | INFO     | [job] create_data_payload thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:47,629 | INFO     | [job] control thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:47,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-07 13:08:24] 2026-04-07 11:07:48,788 | INFO     | [job] queue monitor thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:48,960 | INFO     | [data] queue_monitor thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:07:55,798 | INFO     | job.realtimelogging is not enabled
[2026-04-07 13:08:24] 2026-04-07 11:07:56,804 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-07 13:08:24] 2026-04-07 11:08:16,039 | INFO     | PID=7112 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-07 13:08:24] 2026-04-07 11:08:16,039 | INFO     | .. there are 9 such processes running
[2026-04-07 13:08:24] 2026-04-07 11:08:16,040 | INFO     | found 0 job(s) in 20 queues
[2026-04-07 13:08:24] 2026-04-07 11:08:16,041 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-07 13:08:24] 2026-04-07 11:08:16,041 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-07 13:08:24] 2026-04-07 11:08:17,821 | INFO     | [monitor] cgroup control has ended
[2026-04-07 13:08:24] 2026-04-07 11:08:18,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139947316672320)>', '<ExcThread(monitor, started 139946711037696)>']
[2026-04-07 13:08:24] 2026-04-07 11:08:19,057 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-07 13:08:24] 2026-04-07 11:08:19,057 | INFO     | [monitor] control thread has ended
[2026-04-07 13:08:24] 2026-04-07 11:08:23,853 | INFO     | all workflow threads have been joined
[2026-04-07 13:08:24] 2026-04-07 11:08:23,853 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-07 13:08:24] 2026-04-07 11:08:23,854 | INFO     | traces error code: 0
[2026-04-07 13:08:24] 2026-04-07 11:08:23,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-07 13:08:24] 2026-04-07 11:08:24,003 [wrapper] ==== pilot stdout END ====
[2026-04-07 13:08:24] 2026-04-07 11:08:24,006 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-07 13:08:24] 2026-04-07 11:08:24,010 [wrapper] pilotpid: 7112
[2026-04-07 13:08:24] 2026-04-07 11:08:24,012 [wrapper] Pilot exit status: 0
[2026-04-07 13:08:24] 2026-04-07 11:08:24,044 [wrapper] pandaids: 7082842717
[2026-04-07 13:08:24] 2026-04-07 11:08:24,081 [wrapper] cleanup supervisor_pilot 22720 7113
[2026-04-07 13:08:24] 2026-04-07 11:08:24,088 [wrapper] Test setup, not cleaning
[2026-04-07 13:08:24] 2026-04-07 11:08:24,100 [wrapper] apfmon messages muted
[2026-04-07 13:08:24] 2026-04-07 11:08:24,102 [wrapper] ==== wrapper stdout END ====
[2026-04-07 13:08:24] 2026-04-07 11:08:24,110 [wrapper] ==== wrapper stderr END ====
[2026-04-07 13:08:24]  *** Error codes and diagnostics ***
[2026-04-07 13:08:24]     "exeErrorCode": 0,
[2026-04-07 13:08:24]     "pilotErrorCode": 0,
[2026-04-07 13:08:24]  *** Listing of results directory ***
[2026-04-07 13:08:24] total 491024
[2026-04-07 13:08:24] -rw-r--r--. 1 boinc boinc    644190 Apr  6 23:54 pilot3.tar.gz
[2026-04-07 13:08:24] -rwx------. 1 boinc boinc     36322 Apr  6 23:57 runpilot2-wrapper.sh
[2026-04-07 13:08:24] -rw-r--r--. 1 boinc boinc      5118 Apr  6 23:58 queuedata.json
[2026-04-07 13:08:24] -rw-r--r--. 1 boinc boinc       100 Apr  7 07:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-07 13:08:24] -rwxr-xr-x. 1 boinc boinc      7986 Apr  7 07:03 run_atlas
[2026-04-07 13:08:24] -rw-r--r--. 1 boinc boinc       105 Apr  7 07:03 job.xml
[2026-04-07 13:08:24] -rw-r--r--. 1 boinc boinc      6307 Apr  7 07:03 init_data.xml
[2026-04-07 13:08:24] -rw-r--r--. 2 boinc boinc 240242029 Apr  7 07:03 EVNT.49515475._000006.pool.root.1
[2026-04-07 13:08:24] -rw-r--r--. 2 boinc boinc     15665 Apr  7 07:03 start_atlas.sh
[2026-04-07 13:08:24] drwxrwx--x. 2 boinc boinc        68 Apr  7 07:03 shared
[2026-04-07 13:08:24] -rw-r--r--. 2 boinc boinc    656950 Apr  7 07:03 input.tar.gz
[2026-04-07 13:08:24] -rw-r--r--. 1 boinc boinc         0 Apr  7 07:03 boinc_lockfile
[2026-04-07 13:08:24] -rw-r--r--. 1 boinc boinc      2611 Apr  7 07:04 pandaJob.out
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc       415 Apr  7 07:10 workernode_map.json
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc   1005412 Apr  7 07:10 agis_schedconf.cvmfs.json
[2026-04-07 13:08:24] drwx------. 5 boinc boinc      4096 Apr  7 07:10 pilot3
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc 253631740 Apr  7 13:06 HITS.49515477._000335.pool.root.1
[2026-04-07 13:08:24] -rw-r--r--. 1 boinc boinc       489 Apr  7 13:07 boinc_task_state.xml
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc      1017 Apr  7 13:07 memory_monitor_summary.json
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc   1511579 Apr  7 13:07 agis_ddmendpoints.agis.ALL.json
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc    470381 Apr  7 13:07 log.49515477._000335.job.log.tgz.1
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc      6339 Apr  7 13:07 heartbeat_new.json
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc      6230 Apr  7 13:07 heartbeat.json
[2026-04-07 13:08:24] -rw-r--r--. 1 boinc boinc        29 Apr  7 13:08 wrapper_checkpoint.txt
[2026-04-07 13:08:24] -rw-r--r--. 1 boinc boinc      8192 Apr  7 13:08 boinc_mmap_file
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc        95 Apr  7 13:08 pilot_heartbeat.json
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc      4950 Apr  7 13:08 pilotlog.txt
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc   1974707 Apr  7 13:08 log.49515477._000335.job.log.1
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc       357 Apr  7 13:08 output.list
[2026-04-07 13:08:24] -rw-r--r--. 1 boinc boinc       410 Apr  7 13:08 runtime_log
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc   2457600 Apr  7 13:08 result.tar.gz
[2026-04-07 13:08:24] -rw-r--r--. 1 boinc boinc      8438 Apr  7 13:08 runtime_log.err
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc       658 Apr  7 13:08 2c3f54654237.diag
[2026-04-07 13:08:24] -rw-r--r--. 1 boinc boinc     20618 Apr  7 13:08 stderr.txt
[2026-04-07 13:08:24] HITS file was successfully produced:
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc 253631740 Apr  7 13:06 shared/HITS.pool.root.1
[2026-04-07 13:08:24]  *** Contents of shared directory: ***
[2026-04-07 13:08:24] total 485360
[2026-04-07 13:08:24] -rw-r--r--. 2 boinc boinc 240242029 Apr  7 07:03 ATLAS.root_0
[2026-04-07 13:08:24] -rw-r--r--. 2 boinc boinc     15665 Apr  7 07:03 start_atlas.sh
[2026-04-07 13:08:24] -rw-r--r--. 2 boinc boinc    656950 Apr  7 07:03 input.tar.gz
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc 253631740 Apr  7 13:06 HITS.pool.root.1
[2026-04-07 13:08:24] -rw-------. 1 boinc boinc   2457600 Apr  7 13:08 result.tar.gz
13:08:25 (3031): run_atlas exited; CPU time 160234.074548
13:08:25 (3031): called boinc_finish(0)

</stderr_txt>
]]>

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