Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:40:17 (1447776): wrapper (7.7.26015): starting
05:40:17 (1447776): wrapper: running run_atlas (--nthreads 12)
[2026-04-06 05:40:17] Arguments: --nthreads 12
[2026-04-06 05:40:17] Threads: 12
[2026-04-06 05:40:17] Checking for CVMFS
[2026-04-06 05:40:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-06 05:40:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-06 05:40:18] Running cvmfs_config stat atlas.cern.ch
[2026-04-06 05:40:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-06 05:40:18] 2.13.3.0 9294 218476 247048 158142 2 99 23665034 32935937 19181 16776704 0 917675588 99.702 696320234 32427 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-06 05:40:18] CVMFS is ok
[2026-04-06 05:40:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-06 05:40:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-06 05:40:18] Further information can be found at the LHC@home message board.
[2026-04-06 05:40:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-06 05:40:18] Checking for apptainer binary...
[2026-04-06 05:40:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-06 05:40:18] Running /usr/bin/apptainer --version
[2026-04-06 05:40:18] apptainer version 1.4.5-2.el9
[2026-04-06 05:40:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-06 05:40:18] c-4-38.aglt2.org
[2026-04-06 05:40:18] apptainer works
[2026-04-06 05:40:18] Set ATHENA_PROC_NUMBER=12
[2026-04-06 05:40:18] Set ATHENA_CORE_NUMBER=12
[2026-04-06 05:40:18] Starting ATLAS job with PandaID=7082584819
[2026-04-06 05:40:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-06 16:15:59]  *** The last 200 lines of the pilot log: ***
[2026-04-06 16:15:59] 2026-04-06 20:15:13,454 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-06 16:15:59] 2026-04-06 20:15:13,465 | INFO     | this job has now completed (state=finished)
[2026-04-06 16:15:59] 2026-04-06 20:15:13,465 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-06 16:15:59] 2026-04-06 20:15:13,465 | INFO     | log transfer has been attempted: DONE
[2026-04-06 16:15:59] 2026-04-06 20:15:13,466 | INFO     | job 7082584819 has finished - writing final server update
[2026-04-06 16:15:59] 2026-04-06 20:15:13,466 | INFO     | total number of processed events: 400 (read)
[2026-04-06 16:15:59] 2026-04-06 20:15:13,509 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7082584819/memory_monitor_summary.json (trf name=prmon)
[2026-04-06 16:15:59] 2026-04-06 20:15:13,510 | INFO     | extracted standard info from prmon json
[2026-04-06 16:15:59] 2026-04-06 20:15:13,525 | INFO     | extracted standard memory fields from prmon json
[2026-04-06 16:15:59] 2026-04-06 20:15:13,530 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-06 16:15:59] 2026-04-06 20:15:13,530 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-06 16:15:59] 2026-04-06 20:15:13,553 | INFO     | fitting pss+swap vs Time
[2026-04-06 16:15:59] 2026-04-06 20:15:13,554 | INFO     | sum of square deviations: 75345067007.17307
[2026-04-06 16:15:59] 2026-04-06 20:15:13,594 | INFO     | sum of deviations: 102536206319.50035
[2026-04-06 16:15:59] 2026-04-06 20:15:13,594 | INFO     | mean x (centered): 0.0
[2026-04-06 16:15:59] 2026-04-06 20:15:13,594 | INFO     | mean y: 2726037.75
[2026-04-06 16:15:59] 2026-04-06 20:15:13,594 | INFO     | intersect: 2726037.75
[2026-04-06 16:15:59] 2026-04-06 20:15:13,595 | INFO     | chi2: 2.3378229996166886
[2026-04-06 16:15:59] 2026-04-06 20:15:13,596 | INFO     | sum of square deviations: 73548510861.57024
[2026-04-06 16:15:59] 2026-04-06 20:15:13,662 | INFO     | sum of deviations: 143589345088.2957
[2026-04-06 16:15:59] 2026-04-06 20:15:13,663 | INFO     | mean x (centered): 0.0
[2026-04-06 16:15:59] 2026-04-06 20:15:13,663 | INFO     | mean y: 2729498.7092084005
[2026-04-06 16:15:59] 2026-04-06 20:15:13,663 | INFO     | intersect: 2729498.7092084005
[2026-04-06 16:15:59] 2026-04-06 20:15:13,664 | INFO     | chi2: 1.6322146995345466
[2026-04-06 16:15:59] 2026-04-06 20:15:13,664 | INFO     | current chi2=1.6322146995345466 (change=30.18228070293748 %)
[2026-04-06 16:15:59] 2026-04-06 20:15:13,682 | INFO     | sum of square deviations: 71780632193.56995
[2026-04-06 16:15:59] 2026-04-06 20:15:13,732 | INFO     | sum of deviations: 140487741204.2183
[2026-04-06 16:15:59] 2026-04-06 20:15:13,732 | INFO     | mean x (centered): 0.0
[2026-04-06 16:15:59] 2026-04-06 20:15:13,732 | INFO     | mean y: 2729231.1498371335
[2026-04-06 16:15:59] 2026-04-06 20:15:13,732 | INFO     | intersect: 2729231.1498371335
[2026-04-06 16:15:59] 2026-04-06 20:15:13,733 | INFO     | chi2: 1.6322765339049945
[2026-04-06 16:15:59] 2026-04-06 20:15:13,733 | INFO     | current chi2=1.6322765339049945 (change=-0.0037883723547867845 %)
[2026-04-06 16:15:59] 2026-04-06 20:15:13,734 | INFO     | right removable region: 613
[2026-04-06 16:15:59] 2026-04-06 20:15:13,754 | INFO     | sum of square deviations: 73548136312.90201
[2026-04-06 16:15:59] 2026-04-06 20:15:13,786 | INFO     | sum of deviations: -14937533218.01133
[2026-04-06 16:15:59] 2026-04-06 20:15:13,787 | INFO     | mean x (centered): 0.0
[2026-04-06 16:15:59] 2026-04-06 20:15:13,787 | INFO     | mean y: 2735978.4733441034
[2026-04-06 16:15:59] 2026-04-06 20:15:13,787 | INFO     | intersect: 2735978.4733441034
[2026-04-06 16:15:59] 2026-04-06 20:15:13,827 | INFO     | chi2: 0.8059756697952426
[2026-04-06 16:15:59] 2026-04-06 20:15:13,827 | INFO     | current chi2=0.8059756697952426 (change=65.52452132058797 %)
[2026-04-06 16:15:59] 2026-04-06 20:15:13,828 | INFO     | sum of square deviations: 71780071888.73132
[2026-04-06 16:15:59] 2026-04-06 20:15:13,856 | INFO     | sum of deviations: -24751566961.861557
[2026-04-06 16:15:59] 2026-04-06 20:15:13,857 | INFO     | mean x (centered): 0.0
[2026-04-06 16:15:59] 2026-04-06 20:15:13,861 | INFO     | mean y: 2736818.0146579803
[2026-04-06 16:15:59] 2026-04-06 20:15:13,861 | INFO     | intersect: 2736818.0146579803
[2026-04-06 16:15:59] 2026-04-06 20:15:13,862 | INFO     | chi2: 0.7686709097012634
[2026-04-06 16:15:59] 2026-04-06 20:15:13,862 | INFO     | current chi2=0.7686709097012634 (change=4.628521863874185 %)
[2026-04-06 16:15:59] 2026-04-06 20:15:13,863 | INFO     | left removable region: 10
[2026-04-06 16:15:59] 2026-04-06 20:15:13,863 | INFO     | sum of square deviations: 67991025069.45638
[2026-04-06 16:15:59] 2026-04-06 20:15:13,885 | INFO     | sum of deviations: 14213331021.121046
[2026-04-06 16:15:59] 2026-04-06 20:15:13,885 | INFO     | mean x (centered): 0.0
[2026-04-06 16:15:59] 2026-04-06 20:15:13,886 | INFO     | mean y: 2740206.0961857378
[2026-04-06 16:15:59] 2026-04-06 20:15:13,886 | INFO     | intersect: 2740206.0961857378
[2026-04-06 16:15:59] 2026-04-06 20:15:13,887 | INFO     | chi2: 0.056136966821369434
[2026-04-06 16:15:59] 2026-04-06 20:15:13,887 | INFO     | current memory leak: 0.21 B/s (using 603 data points, chi2=0.06)
[2026-04-06 16:15:59] 2026-04-06 20:15:13,888 | INFO     | could have reported an average CPU frequency of 2600 MHz (25 samples)
[2026-04-06 16:15:59] 2026-04-06 20:15:13,888 | INFO     | ..............................
[2026-04-06 16:15:59] 2026-04-06 20:15:13,888 | INFO     | . Timing measurements:
[2026-04-06 16:15:59] 2026-04-06 20:15:13,888 | INFO     | . get job = 0 s
[2026-04-06 16:15:59] 2026-04-06 20:15:13,888 | INFO     | . initial setup = 7 s
[2026-04-06 16:15:59] 2026-04-06 20:15:13,889 | INFO     | . payload setup = 13 s
[2026-04-06 16:15:59] 2026-04-06 20:15:13,897 | INFO     | . stage-in = 0 s
[2026-04-06 16:15:59] 2026-04-06 20:15:13,897 | INFO     | . payload execution = 38037 s
[2026-04-06 16:15:59] 2026-04-06 20:15:13,897 | INFO     | . stage-out = 3 s
[2026-04-06 16:15:59] 2026-04-06 20:15:13,897 | INFO     | . log creation = 0 s
[2026-04-06 16:15:59] 2026-04-06 20:15:13,897 | INFO     | ..............................
[2026-04-06 16:15:59] 2026-04-06 20:15:14,219 | INFO     | 
[2026-04-06 16:15:59] 2026-04-06 20:15:14,219 | INFO     | job summary report
[2026-04-06 16:15:59] 2026-04-06 20:15:14,220 | INFO     | --------------------------------------------------
[2026-04-06 16:15:59] 2026-04-06 20:15:14,220 | INFO     | PanDA job id: 7082584819
[2026-04-06 16:15:59] 2026-04-06 20:15:14,220 | INFO     | task id: 49515685
[2026-04-06 16:15:59] 2026-04-06 20:15:14,220 | INFO     | errors: (none)
[2026-04-06 16:15:59] 2026-04-06 20:15:14,220 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-06 16:15:59] 2026-04-06 20:15:14,220 | INFO     | pilot state: finished 
[2026-04-06 16:15:59] 2026-04-06 20:15:14,220 | INFO     | transexitcode: 0
[2026-04-06 16:15:59] 2026-04-06 20:15:14,220 | INFO     | exeerrorcode: 0
[2026-04-06 16:15:59] 2026-04-06 20:15:14,220 | INFO     | exeerrordiag: 
[2026-04-06 16:15:59] 2026-04-06 20:15:14,220 | INFO     | exitcode: 0
[2026-04-06 16:15:59] 2026-04-06 20:15:14,221 | INFO     | exitmsg: OK
[2026-04-06 16:15:59] 2026-04-06 20:15:14,221 | INFO     | cpuconsumptiontime: 104393 s
[2026-04-06 16:15:59] 2026-04-06 20:15:14,221 | INFO     | nevents: 400
[2026-04-06 16:15:59] 2026-04-06 20:15:14,221 | INFO     | neventsw: 0
[2026-04-06 16:15:59] 2026-04-06 20:15:14,221 | INFO     | pid: 1464542
[2026-04-06 16:15:59] 2026-04-06 20:15:14,221 | INFO     | pgrp: 1464542
[2026-04-06 16:15:59] 2026-04-06 20:15:14,221 | INFO     | corecount: 12
[2026-04-06 16:15:59] 2026-04-06 20:15:14,221 | INFO     | event service: False
[2026-04-06 16:15:59] 2026-04-06 20:15:14,221 | INFO     | sizes: {0: 2279189, 1: 2281675, 12: 2281675, 38054: 2322751, 38059: 2331749, 38062: 2331805, 38064: 2332191}
[2026-04-06 16:15:59] 2026-04-06 20:15:14,222 | INFO     | --------------------------------------------------
[2026-04-06 16:15:59] 2026-04-06 20:15:14,222 | INFO     | 
[2026-04-06 16:15:59] 2026-04-06 20:15:14,222 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-06 16:15:59] 2026-04-06 20:15:14,296 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,296 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,296 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,296 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,297 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,297 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,297 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,297 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,297 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,298 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-06 16:15:59] 2026-04-06 20:15:14,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,298 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-06 16:15:59] 2026-04-06 20:15:14,298 | INFO     | job 7082584819 has completed (purged errors)
[2026-04-06 16:15:59] 2026-04-06 20:15:14,298 | INFO     | overall cleanup function is called
[2026-04-06 16:15:59] 2026-04-06 20:15:15,323 | INFO     | --- collectZombieJob: --- 10, [1464542]
[2026-04-06 16:15:59] 2026-04-06 20:15:15,328 | INFO     | zombie collector waiting for pid 1464542
[2026-04-06 16:15:59] 2026-04-06 20:15:15,328 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-06 16:15:59] 2026-04-06 20:15:15,328 | INFO     | collected zombie processes
[2026-04-06 16:15:59] 2026-04-06 20:15:15,328 | INFO     | will attempt to kill all subprocesses of pid=1464542
[2026-04-06 16:15:59] 2026-04-06 20:15:16,221 | INFO     | process IDs to be killed: [1464542] (in reverse order)
[2026-04-06 16:15:59] 2026-04-06 20:15:16,320 | WARNING  | found no corresponding commands to process id(s)
[2026-04-06 16:15:59] 2026-04-06 20:15:16,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-06 16:15:59] 2026-04-06 20:15:16,333 | INFO     | did not find any defunct processes belonging to 1464542
[2026-04-06 16:15:59] 2026-04-06 20:15:16,351 | INFO     | did not find any defunct processes belonging to 1464542
[2026-04-06 16:15:59] 2026-04-06 20:15:16,351 | INFO     | Ready for new job
[2026-04-06 16:15:59] 2026-04-06 20:15:16,354 | INFO     | **************************************
[2026-04-06 16:15:59] 2026-04-06 20:15:16,354 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-06 16:15:59] 2026-04-06 20:15:16,354 | INFO     | **************************************
[2026-04-06 16:15:59] 2026-04-06 20:15:16,354 | INFO     | 
[2026-04-06 16:15:59] 2026-04-06 20:15:16,356 | INFO     | architecture information:
[2026-04-06 16:15:59] 2026-04-06 20:15:16,357 | INFO     | executing command: cat /etc/os-release
[2026-04-06 16:15:59] 2026-04-06 20:15:16,377 | INFO     | cat /etc/os-release:
[2026-04-06 16:15:59] NAME="CentOS Linux"
[2026-04-06 16:15:59] VERSION="7 (Core)"
[2026-04-06 16:15:59] ID="centos"
[2026-04-06 16:15:59] ID_LIKE="rhel fedora"
[2026-04-06 16:15:59] VERSION_ID="7"
[2026-04-06 16:15:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-06 16:15:59] ANSI_COLOR="0;31"
[2026-04-06 16:15:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-06 16:15:59] HOME_URL="https://www.centos.org/"
[2026-04-06 16:15:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-06 16:15:59] 
[2026-04-06 16:15:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-06 16:15:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-06 16:15:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-06 16:15:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-06 16:15:59] 
[2026-04-06 16:15:59] 2026-04-06 20:15:16,377 | INFO     | **************************************
[2026-04-06 16:15:59] 2026-04-06 20:15:16,882 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-06 16:15:59] 2026-04-06 20:15:16,954 | INFO     | sufficient remaining disk space (75713478656 B)
[2026-04-06 16:15:59] 2026-04-06 20:15:16,954 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-06 16:15:59] 2026-04-06 20:15:16,955 | INFO     | current server update state: UPDATING_FINAL
[2026-04-06 16:15:59] 2026-04-06 20:15:16,955 | INFO     | update_server=False
[2026-04-06 16:15:59] 2026-04-06 20:15:16,955 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-06 16:15:59] 2026-04-06 20:15:16,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-06 16:15:59] 2026-04-06 20:15:16,960 | INFO     | aborting loop
[2026-04-06 16:15:59] 2026-04-06 20:15:17,223 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-06 16:15:59] 2026-04-06 20:15:17,228 | INFO     | all data control threads have been joined
[2026-04-06 16:15:59] 2026-04-06 20:15:17,451 | INFO     | all job control threads have been joined
[2026-04-06 16:15:59] 2026-04-06 20:15:17,961 | INFO     | [job] retrieve thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:17,966 | INFO     | [job] job monitor thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:17,980 | INFO     | all payload control threads have been joined
[2026-04-06 16:15:59] 2026-04-06 20:15:18,032 | INFO     | [payload] validate_pre thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:18,036 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:18,112 | INFO     | [job] validate thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:18,118 | INFO     | [payload] failed_post thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:18,234 | INFO     | [data] control thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:18,457 | INFO     | [job] control thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:18,493 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-06 16:15:59] 2026-04-06 20:15:18,681 | INFO     | [payload] validate_post thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:18,845 | INFO     | [data] copytool_in thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:18,986 | INFO     | [payload] control thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:19,196 | INFO     | [job] create_data_payload thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:19,230 | INFO     | [data] copytool_out thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:19,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-06 16:15:59] 2026-04-06 20:15:19,458 | INFO     | [payload] execute_payloads thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:20,248 | INFO     | [job] queue monitor thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:22,502 | INFO     | [data] queue_monitor thread has finished
[2026-04-06 16:15:59] 2026-04-06 20:15:46,625 | INFO     | PID=1451672 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-06 16:15:59] 2026-04-06 20:15:46,625 | INFO     | .. there are 19 such processes running
[2026-04-06 16:15:59] 2026-04-06 20:15:46,626 | INFO     | found 0 job(s) in 20 queues
[2026-04-06 16:15:59] 2026-04-06 20:15:46,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-06 16:15:59] 2026-04-06 20:15:46,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-06 16:15:59] 2026-04-06 20:15:52,616 | INFO     | [monitor] cgroup control has ended
[2026-04-06 16:15:59] 2026-04-06 20:15:53,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140145111709504)>', '<ExcThread(monitor, started 140144615077632)>']
[2026-04-06 16:15:59] 2026-04-06 20:15:53,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-06 16:15:59] 2026-04-06 20:15:53,675 | INFO     | [monitor] control thread has ended
[2026-04-06 16:15:59] 2026-04-06 20:15:58,325 | INFO     | all workflow threads have been joined
[2026-04-06 16:15:59] 2026-04-06 20:15:58,325 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-06 16:15:59] 2026-04-06 20:15:58,325 | INFO     | traces error code: 0
[2026-04-06 16:15:59] 2026-04-06 20:15:58,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-06 16:15:59] 2026-04-06 20:15:58,951 [wrapper] ==== pilot stdout END ====
[2026-04-06 16:15:59] 2026-04-06 20:15:58,955 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-06 16:15:59] 2026-04-06 20:15:58,960 [wrapper] pilotpid: 1451672
[2026-04-06 16:15:59] 2026-04-06 20:15:58,966 [wrapper] Pilot exit status: 0
[2026-04-06 16:15:59] 2026-04-06 20:15:59,000 [wrapper] pandaids: 7082584819
[2026-04-06 16:15:59] 2026-04-06 20:15:59,131 [wrapper] cleanup supervisor_pilot 3301211 1451673
[2026-04-06 16:15:59] 2026-04-06 20:15:59,135 [wrapper] Test setup, not cleaning
[2026-04-06 16:15:59] 2026-04-06 20:15:59,143 [wrapper] apfmon messages muted
[2026-04-06 16:15:59] 2026-04-06 20:15:59,150 [wrapper] ==== wrapper stdout END ====
[2026-04-06 16:15:59] 2026-04-06 20:15:59,155 [wrapper] ==== wrapper stderr END ====
[2026-04-06 16:15:59]  *** Error codes and diagnostics ***
[2026-04-06 16:15:59]     "exeErrorCode": 0,
[2026-04-06 16:15:59]     "pilotErrorCode": 0,
[2026-04-06 16:15:59]  *** Listing of results directory ***
[2026-04-06 16:15:59] total 494712
[2026-04-06 16:15:59] -rw-r--r--. 1 boincer umatlas      5118 Apr  6 05:33 queuedata.json
[2026-04-06 16:15:59] -rw-r--r--. 1 boincer umatlas    644190 Apr  6 05:33 pilot3.tar.gz
[2026-04-06 16:15:59] -rwx------. 1 boincer umatlas     36322 Apr  6 05:34 runpilot2-wrapper.sh
[2026-04-06 16:15:59] -rw-r--r--. 1 boincer umatlas       100 Apr  6 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-06 16:15:59] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  6 05:40 run_atlas
[2026-04-06 16:15:59] -rw-r--r--. 1 boincer umatlas       105 Apr  6 05:40 job.xml
[2026-04-06 16:15:59] -rw-r--r--. 2 boincer umatlas 253829172 Apr  6 05:40 EVNT.49515683._000009.pool.root.1
[2026-04-06 16:15:59] -rw-r--r--. 2 boincer umatlas    656939 Apr  6 05:40 input.tar.gz
[2026-04-06 16:15:59] -rw-r--r--. 2 boincer umatlas     15665 Apr  6 05:40 start_atlas.sh
[2026-04-06 16:15:59] drwxrwx--x. 2 boincer umatlas      4096 Apr  6 05:40 shared
[2026-04-06 16:15:59] -rw-r--r--. 1 boincer umatlas         0 Apr  6 05:40 boinc_lockfile
[2026-04-06 16:15:59] -rw-r--r--. 1 boincer umatlas      2617 Apr  6 05:40 pandaJob.out
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas        57 Apr  6 05:40 setup.sh.local
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas   1005404 Apr  6 05:40 agis_schedconf.cvmfs.json
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas       440 Apr  6 05:40 workernode_map.json
[2026-04-06 16:15:59] drwx------. 5 boincer umatlas      4096 Apr  6 05:40 pilot3
[2026-04-06 16:15:59] -rw-r--r--. 1 boincer umatlas      6577 Apr  6 16:11 init_data.xml
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas 241730946 Apr  6 16:13 HITS.49515685._000197.pool.root.1
[2026-04-06 16:15:59] -rw-r--r--. 1 boincer umatlas       489 Apr  6 16:14 boinc_task_state.xml
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas      1065 Apr  6 16:15 memory_monitor_summary.json
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas   1511579 Apr  6 16:15 agis_ddmendpoints.agis.ALL.json
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas    640221 Apr  6 16:15 log.49515685._000197.job.log.tgz.1
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas      6419 Apr  6 16:15 heartbeat_new.json
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas      6310 Apr  6 16:15 heartbeat.json
[2026-04-06 16:15:59] -rw-r--r--. 1 boincer umatlas        29 Apr  6 16:15 wrapper_checkpoint.txt
[2026-04-06 16:15:59] -rw-r--r--. 1 boincer umatlas      8192 Apr  6 16:15 boinc_mmap_file
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas        95 Apr  6 16:15 pilot_heartbeat.json
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas      4819 Apr  6 16:15 pilotlog.txt
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas   2830684 Apr  6 16:15 log.49515685._000197.job.log.1
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas       357 Apr  6 16:15 output.list
[2026-04-06 16:15:59] -rw-r--r--. 1 boincer umatlas       410 Apr  6 16:15 runtime_log
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas   3491840 Apr  6 16:15 result.tar.gz
[2026-04-06 16:15:59] -rw-r--r--. 1 boincer umatlas      8956 Apr  6 16:15 runtime_log.err
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas       661 Apr  6 16:15 7e174d6a1ef0.diag
[2026-04-06 16:15:59] -rw-r--r--. 1 boincer umatlas     21046 Apr  6 16:15 stderr.txt
[2026-04-06 16:15:59] HITS file was successfully produced:
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas 241730946 Apr  6 16:13 shared/HITS.pool.root.1
[2026-04-06 16:15:59]  *** Contents of shared directory: ***
[2026-04-06 16:15:59] total 488032
[2026-04-06 16:15:59] -rw-r--r--. 2 boincer umatlas 253829172 Apr  6 05:40 ATLAS.root_0
[2026-04-06 16:15:59] -rw-r--r--. 2 boincer umatlas    656939 Apr  6 05:40 input.tar.gz
[2026-04-06 16:15:59] -rw-r--r--. 2 boincer umatlas     15665 Apr  6 05:40 start_atlas.sh
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas 241730946 Apr  6 16:13 HITS.pool.root.1
[2026-04-06 16:15:59] -rw-------. 1 boincer umatlas   3491840 Apr  6 16:15 result.tar.gz
16:16:00 (1447776): run_atlas exited; CPU time 105704.100989
16:16:00 (1447776): called boinc_finish(0)

</stderr_txt>
]]>

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