Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:23:07 (692486): wrapper (7.7.26015): starting
05:23:07 (692486): wrapper: running run_atlas (--nthreads 12)
[2026-04-06 05:23:07] Arguments: --nthreads 12
[2026-04-06 05:23:07] Threads: 12
[2026-04-06 05:23:07] Checking for CVMFS
[2026-04-06 05:23:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-06 05:23:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-06 05:23:08] Running cvmfs_config stat atlas.cern.ch
[2026-04-06 05:23:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-06 05:23:10] 2.13.3.0 15733 217066 697864 158142 3 51 17165501 32935936 20629 16776704 0 954796550 99.677 778088702 28264 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-06 05:23:10] CVMFS is ok
[2026-04-06 05:23:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-06 05:23:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-06 05:23:10] Further information can be found at the LHC@home message board.
[2026-04-06 05:23:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-06 05:23:10] Checking for apptainer binary...
[2026-04-06 05:23:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-06 05:23:10] Running /usr/bin/apptainer --version
[2026-04-06 05:23:10] apptainer version 1.4.5-2.el9
[2026-04-06 05:23:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-06 05:23:12] c-8-39.aglt2.org
[2026-04-06 05:23:12] apptainer works
[2026-04-06 05:23:12] Set ATHENA_PROC_NUMBER=12
[2026-04-06 05:23:12] Set ATHENA_CORE_NUMBER=12
[2026-04-06 05:23:12] Starting ATLAS job with PandaID=7082573544
[2026-04-06 05:23:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-06 21:15:29]  *** The last 200 lines of the pilot log: ***
[2026-04-06 21:15:29] 2026-04-07 01:14:30,500 | INFO     | sum of deviations: 191579218251.04852
[2026-04-06 21:15:29] 2026-04-07 01:14:30,500 | INFO     | mean x (centered): 0.0
[2026-04-06 21:15:29] 2026-04-07 01:14:30,500 | INFO     | mean y: 2719577.234726688
[2026-04-06 21:15:29] 2026-04-07 01:14:30,500 | INFO     | intersect: 2719577.234726688
[2026-04-06 21:15:29] 2026-04-07 01:14:30,502 | INFO     | chi2: 3.5872218436264087
[2026-04-06 21:15:29] 2026-04-07 01:14:30,503 | INFO     | sum of square deviations: 247804888495.3695
[2026-04-06 21:15:29] 2026-04-07 01:14:30,554 | INFO     | sum of deviations: 260548618463.43808
[2026-04-06 21:15:29] 2026-04-07 01:14:30,555 | INFO     | mean x (centered): 0.0
[2026-04-06 21:15:29] 2026-04-07 01:14:30,555 | INFO     | mean y: 2722177.1875
[2026-04-06 21:15:29] 2026-04-07 01:14:30,555 | INFO     | intersect: 2722177.1875
[2026-04-06 21:15:29] 2026-04-07 01:14:30,556 | INFO     | chi2: 2.725938753235521
[2026-04-06 21:15:29] 2026-04-07 01:14:30,557 | INFO     | current chi2=2.725938753235521 (change=24.009752614580314 %)
[2026-04-06 21:15:29] 2026-04-07 01:14:30,557 | INFO     | right removable region: 927
[2026-04-06 21:15:29] 2026-04-07 01:14:30,558 | INFO     | sum of square deviations: 247804457225.36948
[2026-04-06 21:15:29] 2026-04-07 01:14:30,595 | INFO     | sum of deviations: -43143632796.171326
[2026-04-06 21:15:29] 2026-04-07 01:14:30,595 | INFO     | mean x (centered): 0.0
[2026-04-06 21:15:29] 2026-04-07 01:14:30,595 | INFO     | mean y: 2728452.901939655
[2026-04-06 21:15:29] 2026-04-07 01:14:30,595 | INFO     | intersect: 2728452.901939655
[2026-04-06 21:15:29] 2026-04-07 01:14:30,597 | INFO     | chi2: 1.3271021915475552
[2026-04-06 21:15:29] 2026-04-07 01:14:30,597 | INFO     | current chi2=1.3271021915475552 (change=63.004735993524285 %)
[2026-04-06 21:15:29] 2026-04-07 01:14:30,598 | INFO     | sum of square deviations: 243820204097.45172
[2026-04-06 21:15:29] 2026-04-07 01:14:30,628 | INFO     | sum of deviations: -76819553590.70439
[2026-04-06 21:15:29] 2026-04-07 01:14:30,628 | INFO     | mean x (centered): 0.0
[2026-04-06 21:15:29] 2026-04-07 01:14:30,629 | INFO     | mean y: 2729740.0985915493
[2026-04-06 21:15:29] 2026-04-07 01:14:30,629 | INFO     | intersect: 2729740.0985915493
[2026-04-06 21:15:29] 2026-04-07 01:14:30,630 | INFO     | chi2: 1.278310617204603
[2026-04-06 21:15:29] 2026-04-07 01:14:30,630 | INFO     | current chi2=1.278310617204603 (change=3.6765499035199 %)
[2026-04-06 21:15:29] 2026-04-07 01:14:30,630 | INFO     | left removable region: 10
[2026-04-06 21:15:29] 2026-04-07 01:14:30,632 | INFO     | sum of square deviations: 239096266371.91144
[2026-04-06 21:15:29] 2026-04-07 01:14:30,660 | INFO     | sum of deviations: -7635193179.152769
[2026-04-06 21:15:29] 2026-04-07 01:14:30,660 | INFO     | mean x (centered): 0.0
[2026-04-06 21:15:29] 2026-04-07 01:14:30,660 | INFO     | mean y: 2732405.0468920395
[2026-04-06 21:15:29] 2026-04-07 01:14:30,661 | INFO     | intersect: 2732405.0468920395
[2026-04-06 21:15:29] 2026-04-07 01:14:30,662 | INFO     | chi2: 0.40836114520858896
[2026-04-06 21:15:29] 2026-04-07 01:14:30,662 | INFO     | current memory leak: -0.03 B/s (using 917 data points, chi2=0.41)
[2026-04-06 21:15:29] 2026-04-07 01:14:30,663 | INFO     | could have reported an average CPU frequency of 2543 MHz (35 samples)
[2026-04-06 21:15:29] 2026-04-07 01:14:30,664 | INFO     | ..............................
[2026-04-06 21:15:29] 2026-04-07 01:14:30,664 | INFO     | . Timing measurements:
[2026-04-06 21:15:29] 2026-04-07 01:14:30,664 | INFO     | . get job = 0 s
[2026-04-06 21:15:29] 2026-04-07 01:14:30,664 | INFO     | . initial setup = 28 s
[2026-04-06 21:15:29] 2026-04-07 01:14:30,664 | INFO     | . payload setup = 44 s
[2026-04-06 21:15:29] 2026-04-07 01:14:30,664 | INFO     | . stage-in = 0 s
[2026-04-06 21:15:29] 2026-04-07 01:14:30,664 | INFO     | . payload execution = 56937 s
[2026-04-06 21:15:29] 2026-04-07 01:14:30,664 | INFO     | . stage-out = 3 s
[2026-04-06 21:15:29] 2026-04-07 01:14:30,665 | INFO     | . log creation = 0 s
[2026-04-06 21:15:29] 2026-04-07 01:14:30,665 | INFO     | ..............................
[2026-04-06 21:15:29] 2026-04-07 01:14:31,146 | WARNING  | process 703897 can no longer be monitored (due to stat problems) - aborting
[2026-04-06 21:15:29] 2026-04-07 01:14:31,147 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7082573544/memory_monitor_summary.json (trf name=prmon)
[2026-04-06 21:15:29] 2026-04-07 01:14:31,148 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7082573544/memory_monitor_summary.json (trf name=prmon)
[2026-04-06 21:15:29] 2026-04-07 01:14:31,148 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-06 21:15:29] 2026-04-07 01:14:31,149 | WARNING  | maxPSS not found in memory monitor output
[2026-04-06 21:15:29] 2026-04-07 01:14:31,149 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4522664 B
[2026-04-06 21:15:29] 2026-04-07 01:14:31,150 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 17277 B
[2026-04-06 21:15:29] 2026-04-07 01:14:31,150 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-06 21:15:29] 2026-04-07 01:14:31,159 | INFO     | 
[2026-04-06 21:15:29] 2026-04-07 01:14:31,160 | INFO     | job summary report
[2026-04-06 21:15:29] 2026-04-07 01:14:31,160 | INFO     | --------------------------------------------------
[2026-04-06 21:15:29] 2026-04-07 01:14:31,160 | INFO     | PanDA job id: 7082573544
[2026-04-06 21:15:29] 2026-04-07 01:14:31,160 | INFO     | task id: 49515182
[2026-04-06 21:15:29] 2026-04-07 01:14:31,160 | INFO     | errors: (none)
[2026-04-06 21:15:29] 2026-04-07 01:14:31,160 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-06 21:15:29] 2026-04-07 01:14:31,160 | INFO     | pilot state: finished 
[2026-04-06 21:15:29] 2026-04-07 01:14:31,161 | INFO     | transexitcode: 0
[2026-04-06 21:15:29] 2026-04-07 01:14:31,161 | INFO     | exeerrorcode: 0
[2026-04-06 21:15:29] 2026-04-07 01:14:31,161 | INFO     | exeerrordiag: 
[2026-04-06 21:15:29] 2026-04-07 01:14:31,161 | INFO     | exitcode: 0
[2026-04-06 21:15:29] 2026-04-07 01:14:31,161 | INFO     | exitmsg: OK
[2026-04-06 21:15:29] 2026-04-07 01:14:31,161 | INFO     | cpuconsumptiontime: 133066 s
[2026-04-06 21:15:29] 2026-04-07 01:14:31,161 | INFO     | nevents: 400
[2026-04-06 21:15:29] 2026-04-07 01:14:31,161 | INFO     | neventsw: 0
[2026-04-06 21:15:29] 2026-04-07 01:14:31,162 | INFO     | pid: 703897
[2026-04-06 21:15:29] 2026-04-07 01:14:31,162 | INFO     | pgrp: 703897
[2026-04-06 21:15:29] 2026-04-07 01:14:31,162 | INFO     | corecount: 12
[2026-04-06 21:15:29] 2026-04-07 01:14:31,162 | INFO     | event service: False
[2026-04-06 21:15:29] 2026-04-07 01:14:31,170 | INFO     | sizes: {0: 2279165, 1: 2279850, 2: 2281679, 13: 2281679, 56983: 2330617, 56987: 2339799, 56989: 2339937}
[2026-04-06 21:15:29] 2026-04-07 01:14:31,171 | INFO     | --------------------------------------------------
[2026-04-06 21:15:29] 2026-04-07 01:14:31,171 | INFO     | 
[2026-04-06 21:15:29] 2026-04-07 01:14:31,173 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-06 21:15:29] 2026-04-07 01:14:31,180 | INFO     | sufficient remaining disk space (75929485312 B)
[2026-04-06 21:15:29] 2026-04-07 01:14:31,181 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-04-06 21:15:29] 2026-04-07 01:14:31,183 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-7082573544: 5165232 B (within 5033164800 B limit)
[2026-04-06 21:15:29] 2026-04-07 01:14:31,183 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-7082573544/HITS.49515182._000346.pool.root.1 does not exist (skip from workdir size calculation)
[2026-04-06 21:15:29] 2026-04-07 01:14:31,183 | INFO     | total size of present files: 0 B (workdir size: 5165232 B)
[2026-04-06 21:15:29] 2026-04-07 01:14:31,183 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7082573544/HITS.49515182._000346.pool.root.1 since it does not exist
[2026-04-06 21:15:29] 2026-04-07 01:14:31,342 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,342 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,342 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,342 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,344 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-06 21:15:29] 2026-04-07 01:14:31,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,345 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-06 21:15:29] 2026-04-07 01:14:31,345 | INFO     | job 7082573544 has completed (purged errors)
[2026-04-06 21:15:29] 2026-04-07 01:14:31,345 | INFO     | overall cleanup function is called
[2026-04-06 21:15:29] 2026-04-07 01:14:31,762 | INFO     | number of running child processes to parent process 703897: 1
[2026-04-06 21:15:29] 2026-04-07 01:14:31,762 | INFO     | maximum number of monitored processes: 6
[2026-04-06 21:15:29] 2026-04-07 01:14:31,763 | INFO     | aborting job monitoring since job object (job id=7082573544) has expired
[2026-04-06 21:15:29] 2026-04-07 01:14:32,360 | INFO     | --- collectZombieJob: --- 10, [703897]
[2026-04-06 21:15:29] 2026-04-07 01:14:32,361 | INFO     | zombie collector waiting for pid 703897
[2026-04-06 21:15:29] 2026-04-07 01:14:32,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-06 21:15:29] 2026-04-07 01:14:32,361 | INFO     | collected zombie processes
[2026-04-06 21:15:29] 2026-04-07 01:14:32,361 | INFO     | will attempt to kill all subprocesses of pid=703897
[2026-04-06 21:15:29] 2026-04-07 01:14:33,443 | INFO     | process IDs to be killed: [703897] (in reverse order)
[2026-04-06 21:15:29] 2026-04-07 01:14:33,578 | WARNING  | found no corresponding commands to process id(s)
[2026-04-06 21:15:29] 2026-04-07 01:14:33,578 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-06 21:15:29] 2026-04-07 01:14:33,592 | INFO     | did not find any defunct processes belonging to 703897
[2026-04-06 21:15:29] 2026-04-07 01:14:33,617 | INFO     | did not find any defunct processes belonging to 703897
[2026-04-06 21:15:29] 2026-04-07 01:14:33,617 | INFO     | Ready for new job
[2026-04-06 21:15:29] 2026-04-07 01:14:33,621 | INFO     | **************************************
[2026-04-06 21:15:29] 2026-04-07 01:14:33,621 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-06 21:15:29] 2026-04-07 01:14:33,622 | INFO     | **************************************
[2026-04-06 21:15:29] 2026-04-07 01:14:33,622 | INFO     | 
[2026-04-06 21:15:29] 2026-04-07 01:14:33,625 | INFO     | architecture information:
[2026-04-06 21:15:29] 2026-04-07 01:14:33,628 | INFO     | executing command: cat /etc/os-release
[2026-04-06 21:15:29] 2026-04-07 01:14:33,650 | INFO     | cat /etc/os-release:
[2026-04-06 21:15:29] NAME="CentOS Linux"
[2026-04-06 21:15:29] VERSION="7 (Core)"
[2026-04-06 21:15:29] ID="centos"
[2026-04-06 21:15:29] ID_LIKE="rhel fedora"
[2026-04-06 21:15:29] VERSION_ID="7"
[2026-04-06 21:15:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-06 21:15:29] ANSI_COLOR="0;31"
[2026-04-06 21:15:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-06 21:15:29] HOME_URL="https://www.centos.org/"
[2026-04-06 21:15:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-06 21:15:29] 
[2026-04-06 21:15:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-06 21:15:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-06 21:15:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-06 21:15:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-06 21:15:29] 
[2026-04-06 21:15:29] 2026-04-07 01:14:33,650 | INFO     | **************************************
[2026-04-06 21:15:29] 2026-04-07 01:14:34,154 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-06 21:15:29] 2026-04-07 01:14:34,205 | INFO     | sufficient remaining disk space (75938922496 B)
[2026-04-06 21:15:29] 2026-04-07 01:14:34,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-06 21:15:29] 2026-04-07 01:14:34,206 | INFO     | current server update state: UPDATING_FINAL
[2026-04-06 21:15:29] 2026-04-07 01:14:34,206 | INFO     | update_server=False
[2026-04-06 21:15:29] 2026-04-07 01:14:34,206 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-06 21:15:29] 2026-04-07 01:14:34,315 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-06 21:15:29] 2026-04-07 01:14:34,315 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-06 21:15:29] 2026-04-07 01:14:34,315 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-06 21:15:29] 2026-04-07 01:14:34,315 | INFO     | will abort loop
[2026-04-06 21:15:29] 2026-04-07 01:14:34,443 | INFO     | all payload control threads have been joined
[2026-04-06 21:15:29] 2026-04-07 01:14:34,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-06 21:15:29] 2026-04-07 01:14:34,751 | INFO     | all data control threads have been joined
[2026-04-06 21:15:29] 2026-04-07 01:14:35,212 | INFO     | [job] retrieve thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:35,218 | INFO     | [payload] validate_pre thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:35,225 | INFO     | [job] validate thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:35,226 | INFO     | [payload] execute_payloads thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:35,315 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-06 21:15:29] 2026-04-07 01:14:35,327 | INFO     | [job] job monitor thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:35,449 | INFO     | [payload] control thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:35,757 | INFO     | [data] control thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:35,847 | INFO     | [payload] failed_post thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:35,879 | INFO     | all job control threads have been joined
[2026-04-06 21:15:29] 2026-04-07 01:14:35,896 | INFO     | [job] create_data_payload thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:35,939 | INFO     | [data] copytool_in thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:35,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-06 21:15:29] 2026-04-07 01:14:36,020 | INFO     | [payload] validate_post thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:36,628 | INFO     | [data] copytool_out thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:36,886 | INFO     | [job] control thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:36,952 | INFO     | [job] queue monitor thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:39,326 | INFO     | [data] queue_monitor thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:14:45,042 | INFO     | job.realtimelogging is not enabled
[2026-04-06 21:15:29] 2026-04-07 01:14:46,048 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-06 21:15:29] 2026-04-07 01:15:06,989 | INFO     | PID=698304 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-06 21:15:29] 2026-04-07 01:15:07,030 | INFO     | .. there are 19 such processes running
[2026-04-06 21:15:29] 2026-04-07 01:15:07,032 | INFO     | found 0 job(s) in 20 queues
[2026-04-06 21:15:29] 2026-04-07 01:15:07,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-06 21:15:29] 2026-04-07 01:15:07,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-06 21:15:29] 2026-04-07 01:15:22,529 | INFO     | [monitor] cgroup control has ended
[2026-04-06 21:15:29] 2026-04-07 01:15:23,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140491229906752)>', '<ExcThread(monitor, started 140490880030464)>']
[2026-04-06 21:15:29] 2026-04-07 01:15:24,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-06 21:15:29] 2026-04-07 01:15:24,130 | INFO     | [monitor] control thread has ended
[2026-04-06 21:15:29] 2026-04-07 01:15:28,768 | INFO     | all workflow threads have been joined
[2026-04-06 21:15:29] 2026-04-07 01:15:28,769 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-06 21:15:29] 2026-04-07 01:15:28,769 | INFO     | traces error code: 0
[2026-04-06 21:15:29] 2026-04-07 01:15:28,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-06 21:15:29] 2026-04-07 01:15:29,045 [wrapper] ==== pilot stdout END ====
[2026-04-06 21:15:29] 2026-04-07 01:15:29,048 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-06 21:15:29] 2026-04-07 01:15:29,051 [wrapper] pilotpid: 698304
[2026-04-06 21:15:29] 2026-04-07 01:15:29,053 [wrapper] Pilot exit status: 0
[2026-04-06 21:15:29] 2026-04-07 01:15:29,184 [wrapper] pandaids: 7082573544
[2026-04-06 21:15:29] 2026-04-07 01:15:29,291 [wrapper] cleanup supervisor_pilot 3011176 698305
[2026-04-06 21:15:29] 2026-04-07 01:15:29,307 [wrapper] Test setup, not cleaning
[2026-04-06 21:15:29] 2026-04-07 01:15:29,312 [wrapper] apfmon messages muted
[2026-04-06 21:15:29] 2026-04-07 01:15:29,316 [wrapper] ==== wrapper stdout END ====
[2026-04-06 21:15:29] 2026-04-07 01:15:29,319 [wrapper] ==== wrapper stderr END ====
[2026-04-06 21:15:29]  *** Error codes and diagnostics ***
[2026-04-06 21:15:29]     "exeErrorCode": 0,
[2026-04-06 21:15:29]     "pilotErrorCode": 0,
[2026-04-06 21:15:29]  *** Listing of results directory ***
[2026-04-06 21:15:29] total 476956
[2026-04-06 21:15:29] -rw-r--r--. 1 boincer umatlas    644190 Apr  6 05:12 pilot3.tar.gz
[2026-04-06 21:15:29] -rwx------. 1 boincer umatlas     36322 Apr  6 05:15 runpilot2-wrapper.sh
[2026-04-06 21:15:29] -rw-r--r--. 1 boincer umatlas      5118 Apr  6 05:18 queuedata.json
[2026-04-06 21:15:29] -rw-r--r--. 1 boincer umatlas       100 Apr  6 05:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-06 21:15:29] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  6 05:23 run_atlas
[2026-04-06 21:15:29] -rw-r--r--. 1 boincer umatlas       105 Apr  6 05:23 job.xml
[2026-04-06 21:15:29] -rw-r--r--. 2 boincer umatlas 241203900 Apr  6 05:23 EVNT.49515180._000014.pool.root.1
[2026-04-06 21:15:29] -rw-r--r--. 2 boincer umatlas     15665 Apr  6 05:23 start_atlas.sh
[2026-04-06 21:15:29] drwxrwx--x. 2 boincer umatlas      4096 Apr  6 05:23 shared
[2026-04-06 21:15:29] -rw-r--r--. 2 boincer umatlas    656931 Apr  6 05:23 input.tar.gz
[2026-04-06 21:15:29] -rw-r--r--. 1 boincer umatlas         0 Apr  6 05:23 boinc_lockfile
[2026-04-06 21:15:29] -rw-r--r--. 1 boincer umatlas      2596 Apr  6 05:23 pandaJob.out
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas        57 Apr  6 05:23 setup.sh.local
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas   1005404 Apr  6 05:24 agis_schedconf.cvmfs.json
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas       439 Apr  6 05:24 workernode_map.json
[2026-04-06 21:15:29] drwx------. 5 boincer umatlas      4096 Apr  6 05:24 pilot3
[2026-04-06 21:15:29] -rw-r--r--. 1 boincer umatlas      6531 Apr  6 21:09 init_data.xml
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas 233674201 Apr  6 21:13 HITS.49515182._000346.pool.root.1
[2026-04-06 21:15:29] -rw-r--r--. 1 boincer umatlas       489 Apr  6 21:13 boinc_task_state.xml
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas      1043 Apr  6 21:14 memory_monitor_summary.json
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas   1511579 Apr  6 21:14 agis_ddmendpoints.agis.ALL.json
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas    773490 Apr  6 21:14 log.49515182._000346.job.log.tgz.1
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas      6407 Apr  6 21:14 heartbeat_new.json
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas      6298 Apr  6 21:14 heartbeat.json
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas        95 Apr  6 21:15 pilot_heartbeat.json
[2026-04-06 21:15:29] -rw-r--r--. 1 boincer umatlas      8192 Apr  6 21:15 boinc_mmap_file
[2026-04-06 21:15:29] -rw-r--r--. 1 boincer umatlas        29 Apr  6 21:15 wrapper_checkpoint.txt
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas      5076 Apr  6 21:15 pilotlog.txt
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas   3954233 Apr  6 21:15 log.49515182._000346.job.log.1
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas       357 Apr  6 21:15 output.list
[2026-04-06 21:15:29] -rw-r--r--. 1 boincer umatlas       410 Apr  6 21:15 runtime_log
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas   4741120 Apr  6 21:15 result.tar.gz
[2026-04-06 21:15:29] -rw-r--r--. 1 boincer umatlas      8956 Apr  6 21:15 runtime_log.err
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas       657 Apr  6 21:15 79ca8668f353.diag
[2026-04-06 21:15:29] -rw-r--r--. 1 boincer umatlas     21644 Apr  6 21:15 stderr.txt
[2026-04-06 21:15:29] HITS file was successfully produced:
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas 233674201 Apr  6 21:13 shared/HITS.pool.root.1
[2026-04-06 21:15:29]  *** Contents of shared directory: ***
[2026-04-06 21:15:29] total 469052
[2026-04-06 21:15:29] -rw-r--r--. 2 boincer umatlas 241203900 Apr  6 05:23 ATLAS.root_0
[2026-04-06 21:15:29] -rw-r--r--. 2 boincer umatlas     15665 Apr  6 05:23 start_atlas.sh
[2026-04-06 21:15:29] -rw-r--r--. 2 boincer umatlas    656931 Apr  6 05:23 input.tar.gz
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas 233674201 Apr  6 21:13 HITS.pool.root.1
[2026-04-06 21:15:29] -rw-------. 1 boincer umatlas   4741120 Apr  6 21:15 result.tar.gz
21:15:31 (692486): run_atlas exited; CPU time 135788.815512
21:15:31 (692486): called boinc_finish(0)

</stderr_txt>
]]>

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