Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
15:17:24 (491286): wrapper (7.7.26015): starting
15:17:24 (491286): wrapper: running run_atlas (--nthreads 4)
[2026-04-05 15:17:24] Arguments: --nthreads 4
[2026-04-05 15:17:24] Threads: 4
[2026-04-05 15:17:24] Checking for CVMFS
[2026-04-05 15:17:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 15:17:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 15:17:25] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 15:17:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 15:17:25] 2.13.3.0 9043 3010 55848 158122 0 49 3054540 4096000 2149 130560 0 1640744 99.866 330264 1470 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-04-05 15:17:25] CVMFS is ok
[2026-04-05 15:17:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-05 15:17:25] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-05 15:17:25] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-05 15:17:25] Further information can be found at the LHC@home message board.
[2026-04-05 15:17:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 15:17:25] Checking for apptainer binary...
[2026-04-05 15:17:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-05 15:17:25] Running /usr/bin/apptainer --version
[2026-04-05 15:17:26] apptainer version 1.4.5
[2026-04-05 15:17:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 15:17:26] Taichi-Ubuntu
[2026-04-05 15:17:26] apptainer works
[2026-04-05 15:17:26] Set ATHENA_PROC_NUMBER=4
[2026-04-05 15:17:26] Set ATHENA_CORE_NUMBER=4
[2026-04-05 15:17:26] Starting ATLAS job with PandaID=7072015813
[2026-04-05 15:17:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-05 17:41:01]  *** The last 200 lines of the pilot log: ***
[2026-04-05 17:41:01] 2026-04-05 21:40:12,579 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/16/workernode_map.json
[2026-04-05 17:41:01] 2026-04-05 21:40:12,579 | INFO     | this job has now completed (state=finished)
[2026-04-05 17:41:01] 2026-04-05 21:40:12,579 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-05 17:41:01] 2026-04-05 21:40:12,580 | INFO     | log transfer has been attempted: DONE
[2026-04-05 17:41:01] 2026-04-05 21:40:12,580 | INFO     | job 7072015813 has finished - writing final server update
[2026-04-05 17:41:01] 2026-04-05 21:40:12,580 | INFO     | total number of processed events: 400 (read)
[2026-04-05 17:41:01] 2026-04-05 21:40:12,588 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/16/PanDA_Pilot-7072015813/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 17:41:01] 2026-04-05 21:40:12,589 | INFO     | extracted standard info from prmon json
[2026-04-05 17:41:01] 2026-04-05 21:40:12,589 | INFO     | extracted standard memory fields from prmon json
[2026-04-05 17:41:01] 2026-04-05 21:40:12,589 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-05 17:41:01] 2026-04-05 21:40:12,589 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-05 17:41:01] 2026-04-05 21:40:12,589 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-05 17:41:01] 2026-04-05 21:40:12,591 | INFO     | fitting pss+swap vs Time
[2026-04-05 17:41:01] 2026-04-05 21:40:12,591 | INFO     | sum of square deviations: 850825255.0
[2026-04-05 17:41:01] 2026-04-05 21:40:12,592 | INFO     | sum of deviations: -10151160120.999998
[2026-04-05 17:41:01] 2026-04-05 21:40:12,592 | INFO     | mean x: 1775420927.5
[2026-04-05 17:41:01] 2026-04-05 21:40:12,592 | INFO     | mean y: 2389510.285714286
[2026-04-05 17:41:01] 2026-04-05 21:40:12,592 | INFO     | intersect: 21184861482.426254
[2026-04-05 17:41:01] 2026-04-05 21:40:12,592 | INFO     | chi2: 1.4249215521863619
[2026-04-05 17:41:01] 2026-04-05 21:40:12,593 | INFO     | sum of square deviations: 762879420.0
[2026-04-05 17:41:01] 2026-04-05 21:40:12,593 | INFO     | sum of deviations: -9035266137.000008
[2026-04-05 17:41:01] 2026-04-05 21:40:12,593 | INFO     | mean x: 1775420775.0
[2026-04-05 17:41:01] 2026-04-05 21:40:12,593 | INFO     | mean y: 2391446.0888888887
[2026-04-05 17:41:01] 2026-04-05 21:40:12,593 | INFO     | intersect: 21029828792.98155
[2026-04-05 17:41:01] 2026-04-05 21:40:12,594 | INFO     | chi2: 1.425172830169566
[2026-04-05 17:41:01] 2026-04-05 21:40:12,594 | INFO     | current chi2=1.425172830169566 (change=-0.017634513480316173 %)
[2026-04-05 17:41:01] 2026-04-05 21:40:12,594 | INFO     | right removable region: 134
[2026-04-05 17:41:01] 2026-04-05 21:40:12,594 | INFO     | sum of square deviations: 762879420.0
[2026-04-05 17:41:01] 2026-04-05 21:40:12,594 | INFO     | sum of deviations: -26177393233.999996
[2026-04-05 17:41:01] 2026-04-05 21:40:12,594 | INFO     | mean x: 1775421080.0
[2026-04-05 17:41:01] 2026-04-05 21:40:12,595 | INFO     | mean y: 2416655.1925925924
[2026-04-05 17:41:01] 2026-04-05 21:40:12,595 | INFO     | intersect: 60924096475.96029
[2026-04-05 17:41:01] 2026-04-05 21:40:12,595 | INFO     | chi2: 0.07204429922978295
[2026-04-05 17:41:01] 2026-04-05 21:40:12,595 | INFO     | current chi2=0.07204429922978295 (change=94.9439813637993 %)
[2026-04-05 17:41:01] 2026-04-05 21:40:12,595 | INFO     | sum of square deviations: 681212772.5
[2026-04-05 17:41:01] 2026-04-05 21:40:12,595 | INFO     | sum of deviations: -24366547051.0
[2026-04-05 17:41:01] 2026-04-05 21:40:12,596 | INFO     | mean x: 1775421232.5
[2026-04-05 17:41:01] 2026-04-05 21:40:12,596 | INFO     | mean y: 2413265.446153846
[2026-04-05 17:41:01] 2026-04-05 21:40:12,596 | INFO     | intersect: 63508100098.49164
[2026-04-05 17:41:01] 2026-04-05 21:40:12,596 | INFO     | chi2: 0.06995392903886684
[2026-04-05 17:41:01] 2026-04-05 21:40:12,596 | INFO     | current chi2=0.06995392903886684 (change=2.901506730253483 %)
[2026-04-05 17:41:01] 2026-04-05 21:40:12,596 | INFO     | left removable region: 20
[2026-04-05 17:41:01] 2026-04-05 21:40:12,596 | INFO     | sum of square deviations: 459366752.5
[2026-04-05 17:41:01] 2026-04-05 21:40:12,597 | INFO     | sum of deviations: -18470907970.0
[2026-04-05 17:41:01] 2026-04-05 21:40:12,597 | INFO     | mean x: 1775421354.5
[2026-04-05 17:41:01] 2026-04-05 21:40:12,597 | INFO     | mean y: 2407455.9298245613
[2026-04-05 17:41:01] 2026-04-05 21:40:12,597 | INFO     | intersect: 71391214478.79387
[2026-04-05 17:41:01] 2026-04-05 21:40:12,597 | INFO     | chi2: 0.06414970770807245
[2026-04-05 17:41:01] 2026-04-05 21:40:12,597 | INFO     | current memory leak: -40.21 B/s (using 114 data points, chi2=0.06)
[2026-04-05 17:41:01] 2026-04-05 21:40:12,598 | INFO     | could have reported an average CPU frequency of 3297 MHz (8 samples)
[2026-04-05 17:41:01] 2026-04-05 21:40:12,598 | INFO     | ..............................
[2026-04-05 17:41:01] 2026-04-05 21:40:12,598 | INFO     | . Timing measurements:
[2026-04-05 17:41:01] 2026-04-05 21:40:12,598 | INFO     | . get job = 0 s
[2026-04-05 17:41:01] 2026-04-05 21:40:12,598 | INFO     | . initial setup = 6 s
[2026-04-05 17:41:01] 2026-04-05 21:40:12,598 | INFO     | . payload setup = 9 s
[2026-04-05 17:41:01] 2026-04-05 21:40:12,598 | INFO     | . stage-in = 0 s
[2026-04-05 17:41:01] 2026-04-05 21:40:12,598 | INFO     | . payload execution = 8523 s
[2026-04-05 17:41:01] 2026-04-05 21:40:12,598 | INFO     | . stage-out = 0 s
[2026-04-05 17:41:01] 2026-04-05 21:40:12,598 | INFO     | . log creation = 0 s
[2026-04-05 17:41:01] 2026-04-05 21:40:12,598 | INFO     | ..............................
[2026-04-05 17:41:01] 2026-04-05 21:40:12,833 | INFO     | number of running child processes to parent process 508876: 1
[2026-04-05 17:41:01] 2026-04-05 21:40:12,833 | INFO     | maximum number of monitored processes: 6
[2026-04-05 17:41:01] 2026-04-05 21:40:12,834 | INFO     | aborting job monitoring since job object (job id=7072015813) has expired
[2026-04-05 17:41:01] 2026-04-05 21:40:12,998 | INFO     | 
[2026-04-05 17:41:01] 2026-04-05 21:40:12,999 | INFO     | job summary report
[2026-04-05 17:41:01] 2026-04-05 21:40:12,999 | INFO     | --------------------------------------------------
[2026-04-05 17:41:01] 2026-04-05 21:40:12,999 | INFO     | PanDA job id: 7072015813
[2026-04-05 17:41:01] 2026-04-05 21:40:12,999 | INFO     | task id: 48967094
[2026-04-05 17:41:01] 2026-04-05 21:40:12,999 | INFO     | errors: (none)
[2026-04-05 17:41:01] 2026-04-05 21:40:12,999 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-05 17:41:01] 2026-04-05 21:40:12,999 | INFO     | pilot state: finished 
[2026-04-05 17:41:01] 2026-04-05 21:40:12,999 | INFO     | transexitcode: 0
[2026-04-05 17:41:01] 2026-04-05 21:40:12,999 | INFO     | exeerrorcode: 0
[2026-04-05 17:41:01] 2026-04-05 21:40:12,999 | INFO     | exeerrordiag: 
[2026-04-05 17:41:01] 2026-04-05 21:40:12,999 | INFO     | exitcode: 0
[2026-04-05 17:41:01] 2026-04-05 21:40:13,000 | INFO     | exitmsg: OK
[2026-04-05 17:41:01] 2026-04-05 21:40:13,000 | INFO     | cpuconsumptiontime: 33386 s
[2026-04-05 17:41:01] 2026-04-05 21:40:13,000 | INFO     | nevents: 400
[2026-04-05 17:41:01] 2026-04-05 21:40:13,000 | INFO     | neventsw: 0
[2026-04-05 17:41:01] 2026-04-05 21:40:13,000 | INFO     | pid: 508876
[2026-04-05 17:41:01] 2026-04-05 21:40:13,000 | INFO     | pgrp: 508876
[2026-04-05 17:41:01] 2026-04-05 21:40:13,000 | INFO     | corecount: 4
[2026-04-05 17:41:01] 2026-04-05 21:40:13,000 | INFO     | event service: False
[2026-04-05 17:41:01] 2026-04-05 21:40:13,000 | INFO     | sizes: {0: 2280245, 11: 2280245, 8536: 2308100, 8537: 2317128, 8538: 2317378}
[2026-04-05 17:41:01] 2026-04-05 21:40:13,000 | INFO     | --------------------------------------------------
[2026-04-05 17:41:01] 2026-04-05 21:40:13,001 | INFO     | 
[2026-04-05 17:41:01] 2026-04-05 21:40:13,001 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/16
[2026-04-05 17:41:01] 2026-04-05 21:40:13,023 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,023 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,023 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-05 17:41:01] 2026-04-05 21:40:13,024 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,025 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-05 17:41:01] 2026-04-05 21:40:13,025 | INFO     | job 7072015813 has completed (purged errors)
[2026-04-05 17:41:01] 2026-04-05 21:40:13,025 | INFO     | overall cleanup function is called
[2026-04-05 17:41:01] 2026-04-05 21:40:14,031 | INFO     | --- collectZombieJob: --- 10, [508876]
[2026-04-05 17:41:01] 2026-04-05 21:40:14,031 | INFO     | zombie collector waiting for pid 508876
[2026-04-05 17:41:01] 2026-04-05 21:40:14,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-05 17:41:01] 2026-04-05 21:40:14,031 | INFO     | collected zombie processes
[2026-04-05 17:41:01] 2026-04-05 21:40:14,031 | INFO     | will attempt to kill all subprocesses of pid=508876
[2026-04-05 17:41:01] 2026-04-05 21:40:14,219 | INFO     | process IDs to be killed: [508876] (in reverse order)
[2026-04-05 17:41:01] 2026-04-05 21:40:14,288 | WARNING  | found no corresponding commands to process id(s)
[2026-04-05 17:41:01] 2026-04-05 21:40:14,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-05 17:41:01] 2026-04-05 21:40:14,295 | INFO     | did not find any defunct processes belonging to 508876
[2026-04-05 17:41:01] 2026-04-05 21:40:14,299 | INFO     | did not find any defunct processes belonging to 508876
[2026-04-05 17:41:01] 2026-04-05 21:40:14,299 | INFO     | ready for new job
[2026-04-05 17:41:01] 2026-04-05 21:40:14,299 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-05 17:41:01] 2026-04-05 21:40:14,301 | INFO     | **************************************
[2026-04-05 17:41:01] 2026-04-05 21:40:14,301 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-05 17:41:01] 2026-04-05 21:40:14,301 | INFO     | **************************************
[2026-04-05 17:41:01] 2026-04-05 21:40:14,301 | INFO     | 
[2026-04-05 17:41:01] 2026-04-05 21:40:14,303 | INFO     | architecture information:
[2026-04-05 17:41:01] 2026-04-05 21:40:14,304 | INFO     | executing command: cat /etc/os-release
[2026-04-05 17:41:01] 2026-04-05 21:40:14,320 | INFO     | cat /etc/os-release:
[2026-04-05 17:41:01] NAME="CentOS Linux"
[2026-04-05 17:41:01] VERSION="7 (Core)"
[2026-04-05 17:41:01] ID="centos"
[2026-04-05 17:41:01] ID_LIKE="rhel fedora"
[2026-04-05 17:41:01] VERSION_ID="7"
[2026-04-05 17:41:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-05 17:41:01] ANSI_COLOR="0;31"
[2026-04-05 17:41:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-05 17:41:01] HOME_URL="https://www.centos.org/"
[2026-04-05 17:41:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-05 17:41:01] 
[2026-04-05 17:41:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-05 17:41:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-05 17:41:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-05 17:41:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-05 17:41:01] 
[2026-04-05 17:41:01] 2026-04-05 21:40:14,321 | INFO     | **************************************
[2026-04-05 17:41:01] 2026-04-05 21:40:14,824 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/16
[2026-04-05 17:41:01] 2026-04-05 21:40:14,839 | INFO     | sufficient remaining disk space (335388082176 B)
[2026-04-05 17:41:01] 2026-04-05 21:40:14,840 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-05 17:41:01] 2026-04-05 21:40:14,840 | INFO     | current server update state: UPDATING_FINAL
[2026-04-05 17:41:01] 2026-04-05 21:40:14,840 | INFO     | update_server=False
[2026-04-05 17:41:01] 2026-04-05 21:40:14,840 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-05 17:41:01] 2026-04-05 21:40:14,840 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-05 17:41:01] 2026-04-05 21:40:14,841 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-05 17:41:01] 2026-04-05 21:40:15,016 | INFO     | all data control threads have been joined
[2026-04-05 17:41:01] 2026-04-05 21:40:15,337 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-05 17:41:01] 2026-04-05 21:40:15,337 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-05 17:41:01] 2026-04-05 21:40:15,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-05 17:41:01] 2026-04-05 21:40:15,337 | INFO     | will abort loop
[2026-04-05 17:41:01] 2026-04-05 21:40:15,508 | INFO     | all payload control threads have been joined
[2026-04-05 17:41:01] 2026-04-05 21:40:15,816 | INFO     | all job control threads have been joined
[2026-04-05 17:41:01] 2026-04-05 21:40:15,845 | INFO     | [job] retrieve thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:15,885 | INFO     | [job] validate thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:15,889 | INFO     | [payload] execute_payloads thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:15,932 | INFO     | [data] copytool_in thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:15,975 | INFO     | [payload] validate_pre thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:16,020 | INFO     | [data] control thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:16,230 | INFO     | [payload] failed_post thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:16,342 | INFO     | [job] job monitor thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:16,514 | INFO     | [payload] control thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:16,821 | INFO     | [job] control thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:16,847 | INFO     | [data] copytool_out thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:16,863 | INFO     | [payload] validate_post thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:16,902 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:17,327 | INFO     | [job] create_data_payload thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:17,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-05 17:41:01] 2026-04-05 21:40:18,677 | INFO     | [job] queue monitor thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:18,847 | INFO     | [data] queue_monitor thread has finished
[2026-04-05 17:41:01] 2026-04-05 21:40:45,302 | INFO     | PID=499456 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-05 17:41:01] 2026-04-05 21:40:45,302 | INFO     | .. there are 3 such processes running
[2026-04-05 17:41:01] 2026-04-05 21:40:45,302 | INFO     | found 0 job(s) in 20 queues
[2026-04-05 17:41:01] 2026-04-05 21:40:45,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-05 17:41:01] 2026-04-05 21:40:45,302 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-05 17:41:01] 2026-04-05 21:40:55,210 | INFO     | [monitor] cgroup control has ended
[2026-04-05 17:41:01] 2026-04-05 21:40:55,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125521958410048)>', '<ExcThread(monitor, started 125521459394304)>']
[2026-04-05 17:41:01] 2026-04-05 21:40:56,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-05 17:41:01] 2026-04-05 21:40:56,358 | INFO     | [monitor] control thread has ended
[2026-04-05 17:41:01] 2026-04-05 21:41:00,843 | INFO     | all workflow threads have been joined
[2026-04-05 17:41:01] 2026-04-05 21:41:00,843 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-05 17:41:01] 2026-04-05 21:41:00,843 | INFO     | traces error code: 0
[2026-04-05 17:41:01] 2026-04-05 21:41:00,844 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-05 17:41:01] 2026-04-05 21:41:00,946 [wrapper] ==== pilot stdout END ====
[2026-04-05 17:41:01] 2026-04-05 21:41:00,950 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-05 17:41:01] 2026-04-05 21:41:00,952 [wrapper] pilotpid: 499456
[2026-04-05 17:41:01] 2026-04-05 21:41:00,955 [wrapper] Pilot exit status: 0
[2026-04-05 17:41:01] 2026-04-05 21:41:00,966 [wrapper] pandaids: 7072015813
[2026-04-05 17:41:01] 2026-04-05 21:41:01,008 [wrapper] cleanup supervisor_pilot  525250 499458
[2026-04-05 17:41:01] 2026-04-05 21:41:01,011 [wrapper] Test setup, not cleaning
[2026-04-05 17:41:01] 2026-04-05 21:41:01,014 [wrapper] apfmon messages muted
[2026-04-05 17:41:01] 2026-04-05 21:41:01,017 [wrapper] ==== wrapper stdout END ====
[2026-04-05 17:41:01] 2026-04-05 21:41:01,019 [wrapper] ==== wrapper stderr END ====
[2026-04-05 17:41:01]  *** Error codes and diagnostics ***
[2026-04-05 17:41:01]     "exeErrorCode": 0,
[2026-04-05 17:41:01]     "exeErrorDiag": "",
[2026-04-05 17:41:01]     "pilotErrorCode": 0,
[2026-04-05 17:41:01]     "pilotErrorDiag": "",
[2026-04-05 17:41:01]  *** Listing of results directory ***
[2026-04-05 17:41:01] total 418288
[2026-04-05 17:41:01] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 28 21:13 pilot3.tar.gz
[2026-04-05 17:41:01] -rw-r--r-- 1 whitlerd whitlerd      5118 Mar 28 21:13 queuedata.json
[2026-04-05 17:41:01] -rwx------ 1 whitlerd whitlerd     36322 Mar 28 21:13 runpilot2-wrapper.sh
[2026-04-05 17:41:01] -rw-rw-r-- 1 whitlerd whitlerd       100 Apr  5 15:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-05 17:41:01] -rwxr-xr-x 1 whitlerd whitlerd      7986 Apr  5 15:17 run_atlas
[2026-04-05 17:41:01] -rw-rw-r-- 1 whitlerd whitlerd       105 Apr  5 15:17 job.xml
[2026-04-05 17:41:01] -rw-r--r-- 2 whitlerd whitlerd 215908898 Apr  5 15:17 EVNT.48967092._000456.pool.root.1
[2026-04-05 17:41:01] -rw-r--r-- 2 whitlerd whitlerd     15845 Apr  5 15:17 start_atlas.sh
[2026-04-05 17:41:01] drwxrwx--x 2 whitlerd whitlerd      4096 Apr  5 15:17 shared
[2026-04-05 17:41:01] -rw-r--r-- 2 whitlerd whitlerd    597549 Apr  5 15:17 input.tar.gz
[2026-04-05 17:41:01] -rw-rw-r-- 1 whitlerd whitlerd      9356 Apr  5 15:17 init_data.xml
[2026-04-05 17:41:01] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr  5 15:17 boinc_setup_complete
[2026-04-05 17:41:01] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr  5 15:17 boinc_lockfile
[2026-04-05 17:41:01] -rw-rw-r-- 1 whitlerd whitlerd      2601 Apr  5 15:17 pandaJob.out
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd   1005088 Apr  5 15:17 agis_schedconf.cvmfs.json
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd   1511579 Apr  5 15:17 agis_ddmendpoints.agis.ALL.json
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd       438 Apr  5 15:17 workernode_map.json
[2026-04-05 17:41:01] drwx------ 5 whitlerd whitlerd      4096 Apr  5 15:17 pilot3
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd 205359008 Apr  5 17:39 HITS.48967094._018842.pool.root.1
[2026-04-05 17:41:01] -rw-rw-r-- 1 whitlerd whitlerd       529 Apr  5 17:39 boinc_task_state.xml
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd        95 Apr  5 17:39 pilot_heartbeat.json
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd      1036 Apr  5 17:40 memory_monitor_summary.json
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd    318161 Apr  5 17:40 log.48967094._018842.job.log.tgz.1
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd      6348 Apr  5 17:40 heartbeat.json
[2026-04-05 17:41:01] -rw-rw-r-- 1 whitlerd whitlerd      8192 Apr  5 17:41 boinc_mmap_file
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd      5020 Apr  5 17:41 pilotlog.txt
[2026-04-05 17:41:01] -rw-rw-r-- 1 whitlerd whitlerd        27 Apr  5 17:41 wrapper_checkpoint.txt
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd   1237657 Apr  5 17:41 log.48967094._018842.job.log.1
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd       357 Apr  5 17:41 output.list
[2026-04-05 17:41:01] -rw-rw-r-- 1 whitlerd whitlerd       620 Apr  5 17:41 runtime_log
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd   1576960 Apr  5 17:41 result.tar.gz
[2026-04-05 17:41:01] -rw-rw-r-- 1 whitlerd whitlerd      9040 Apr  5 17:41 runtime_log.err
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd       650 Apr  5 17:41 Ix4NDm2ttQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDm3AJKDmdc9OBo.diag
[2026-04-05 17:41:01] -rw-rw-r-- 1 whitlerd whitlerd     21317 Apr  5 17:41 stderr.txt
[2026-04-05 17:41:01] HITS file was successfully produced:
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd 205359008 Apr  5 17:39 shared/HITS.pool.root.1
[2026-04-05 17:41:01]  *** Contents of shared directory: ***
[2026-04-05 17:41:01] total 413548
[2026-04-05 17:41:01] -rw-r--r-- 2 whitlerd whitlerd 215908898 Apr  5 15:17 ATLAS.root_0
[2026-04-05 17:41:01] -rw-r--r-- 2 whitlerd whitlerd     15845 Apr  5 15:17 start_atlas.sh
[2026-04-05 17:41:01] -rw-r--r-- 2 whitlerd whitlerd    597549 Apr  5 15:17 input.tar.gz
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd 205359008 Apr  5 17:39 HITS.pool.root.1
[2026-04-05 17:41:01] -rw------- 1 whitlerd whitlerd   1576960 Apr  5 17:41 result.tar.gz
17:41:02 (491286): run_atlas exited; CPU time 33524.982777
17:41:02 (491286): called boinc_finish(0)

</stderr_txt>
]]>

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