Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:12:49 (1251497): wrapper (7.7.26015): starting
15:12:49 (1251497): wrapper: running run_atlas (--nthreads 8)
[2026-04-05 15:12:49] Arguments: --nthreads 8
[2026-04-05 15:12:49] Threads: 8
[2026-04-05 15:12:49] Checking for CVMFS
[2026-04-05 15:12:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 15:12:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 15:12:51] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 15:12:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 15:12:52] 2.13.3.0 9890 217520 150892 158121 3 268 28518752 32935936 13362 16776704 0 915691855 99.706 696057082 32923 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-05 15:12:52] CVMFS is ok
[2026-04-05 15:12:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-05 15:12:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-05 15:12:52] Further information can be found at the LHC@home message board.
[2026-04-05 15:12:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 15:12:52] Checking for apptainer binary...
[2026-04-05 15:12:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-05 15:12:52] Running /usr/bin/apptainer --version
[2026-04-05 15:12:53] apptainer version 1.4.5-2.el9
[2026-04-05 15:12:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 15:12:53] c-8-36.aglt2.org
[2026-04-05 15:12:53] apptainer works
[2026-04-05 15:12:54] Set ATHENA_PROC_NUMBER=8
[2026-04-05 15:12:54] Set ATHENA_CORE_NUMBER=8
[2026-04-05 15:12:54] Starting ATLAS job with PandaID=7065656303
[2026-04-05 15:12:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-06 01:15:09]  *** The last 200 lines of the pilot log: ***
[2026-04-06 01:15:09] 2026-04-06 05:14:24,488 | INFO     | preparing for final server update for job 7065656303 in state='finished'
[2026-04-06 01:15:09] 2026-04-06 05:14:24,489 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7065656303/jobReport.json
[2026-04-06 01:15:09] 2026-04-06 05:14:24,518 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-04-06 01:15:09] 2026-04-06 05:14:24,519 | INFO     | this job has now completed (state=finished)
[2026-04-06 01:15:09] 2026-04-06 05:14:24,519 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-06 01:15:09] 2026-04-06 05:14:24,519 | INFO     | log transfer has been attempted: DONE
[2026-04-06 01:15:09] 2026-04-06 05:14:24,519 | INFO     | job 7065656303 has finished - writing final server update
[2026-04-06 01:15:09] 2026-04-06 05:14:24,519 | INFO     | total number of processed events: 400 (read)
[2026-04-06 01:15:09] 2026-04-06 05:14:24,551 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7065656303/memory_monitor_summary.json (trf name=prmon)
[2026-04-06 01:15:09] 2026-04-06 05:14:24,552 | INFO     | extracted standard info from prmon json
[2026-04-06 01:15:09] 2026-04-06 05:14:24,552 | INFO     | extracted standard memory fields from prmon json
[2026-04-06 01:15:09] 2026-04-06 05:14:24,552 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-06 01:15:09] 2026-04-06 05:14:24,553 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-06 01:15:09] 2026-04-06 05:14:24,553 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-06 01:15:09] 2026-04-06 05:14:24,575 | INFO     | fitting pss+swap vs Time
[2026-04-06 01:15:09] 2026-04-06 05:14:24,577 | INFO     | sum of square deviations: 63034788203.08002
[2026-04-06 01:15:09] 2026-04-06 05:14:24,614 | INFO     | sum of deviations: 40014455800.96601
[2026-04-06 01:15:09] 2026-04-06 05:14:24,625 | INFO     | mean x: 1775434513.7670069
[2026-04-06 01:15:09] 2026-04-06 05:14:24,625 | INFO     | mean y: 2563257.5034013605
[2026-04-06 01:15:09] 2026-04-06 05:14:24,625 | INFO     | intersect: -1124481790.221026
[2026-04-06 01:15:09] 2026-04-06 05:14:24,617 | INFO     | monitor loop #1865: job 0:7065656303 is in state 'finished'
[2026-04-06 01:15:09] 2026-04-06 05:14:24,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-06 01:15:09] 2026-04-06 05:14:24,626 | INFO     | chi2: 4.212452911884911
[2026-04-06 01:15:09] 2026-04-06 05:14:24,631 | INFO     | sum of square deviations: 61440475482.53846
[2026-04-06 01:15:09] 2026-04-06 05:14:24,660 | INFO     | sum of deviations: 77225248900.07378
[2026-04-06 01:15:09] 2026-04-06 05:14:24,661 | INFO     | mean x: 1775434361.2761579
[2026-04-06 01:15:09] 2026-04-06 05:14:24,661 | INFO     | mean y: 2566791.372212693
[2026-04-06 01:15:09] 2026-04-06 05:14:24,661 | INFO     | intersect: -2228997326.230707
[2026-04-06 01:15:09] 2026-04-06 05:14:24,671 | INFO     | chi2: 3.522277948885856
[2026-04-06 01:15:09] 2026-04-06 05:14:24,675 | INFO     | current chi2=3.522277948885856 (change=16.3841585279639 %)
[2026-04-06 01:15:09] 2026-04-06 05:14:24,675 | INFO     | right removable region: 582
[2026-04-06 01:15:09] 2026-04-06 05:14:24,676 | INFO     | sum of square deviations: 61440056654.984985
[2026-04-06 01:15:09] 2026-04-06 05:14:24,697 | INFO     | sum of deviations: -110573075890.8953
[2026-04-06 01:15:09] 2026-04-06 05:14:24,697 | INFO     | mean x: 1775434666.277873
[2026-04-06 01:15:09] 2026-04-06 05:14:24,697 | INFO     | mean y: 2577626.116638079
[2026-04-06 01:15:09] 2026-04-06 05:14:24,698 | INFO     | intersect: 3197810228.1318483
[2026-04-06 01:15:09] 2026-04-06 05:14:24,699 | INFO     | chi2: 1.4817099774284421
[2026-04-06 01:15:09] 2026-04-06 05:14:24,699 | INFO     | current chi2=1.4817099774284421 (change=64.82548271939179 %)
[2026-04-06 01:15:09] 2026-04-06 05:14:24,702 | INFO     | sum of square deviations: 59872548829.967224
[2026-04-06 01:15:09] 2026-04-06 05:14:24,726 | INFO     | sum of deviations: -132678415498.83046
[2026-04-06 01:15:09] 2026-04-06 05:14:24,727 | INFO     | mean x: 1775434818.783737
[2026-04-06 01:15:09] 2026-04-06 05:14:24,727 | INFO     | mean y: 2579775.2733564014
[2026-04-06 01:15:09] 2026-04-06 05:14:24,727 | INFO     | intersect: 3936968458.919587
[2026-04-06 01:15:09] 2026-04-06 05:14:24,728 | INFO     | chi2: 1.4195324270804002
[2026-04-06 01:15:09] 2026-04-06 05:14:24,728 | INFO     | current chi2=1.4195324270804002 (change=4.196337427379223 %)
[2026-04-06 01:15:09] 2026-04-06 05:14:24,728 | INFO     | left removable region: 20
[2026-04-06 01:15:09] 2026-04-06 05:14:24,729 | INFO     | sum of square deviations: 55036802106.9484
[2026-04-06 01:15:09] 2026-04-06 05:14:24,737 | INFO     | sum of deviations: -102888867835.65128
[2026-04-06 01:15:09] 2026-04-06 05:14:24,738 | INFO     | mean x: 1775434940.7846975
[2026-04-06 01:15:09] 2026-04-06 05:14:24,738 | INFO     | mean y: 2584332.1103202845
[2026-04-06 01:15:09] 2026-04-06 05:14:24,738 | INFO     | intersect: 3321681444.951687
[2026-04-06 01:15:09] 2026-04-06 05:14:24,739 | INFO     | chi2: 0.6876796607814991
[2026-04-06 01:15:09] 2026-04-06 05:14:24,739 | INFO     | current memory leak: -1.87 B/s (using 562 data points, chi2=0.69)
[2026-04-06 01:15:09] 2026-04-06 05:14:24,740 | INFO     | could have reported an average CPU frequency of 2600 MHz (23 samples)
[2026-04-06 01:15:09] 2026-04-06 05:14:24,740 | INFO     | ..............................
[2026-04-06 01:15:09] 2026-04-06 05:14:24,740 | INFO     | . Timing measurements:
[2026-04-06 01:15:09] 2026-04-06 05:14:24,741 | INFO     | . get job = 1 s
[2026-04-06 01:15:09] 2026-04-06 05:14:24,741 | INFO     | . initial setup = 46 s
[2026-04-06 01:15:09] 2026-04-06 05:14:24,741 | INFO     | . payload setup = 66 s
[2026-04-06 01:15:09] 2026-04-06 05:14:24,741 | INFO     | . stage-in = 0 s
[2026-04-06 01:15:09] 2026-04-06 05:14:24,741 | INFO     | . payload execution = 35872 s
[2026-04-06 01:15:09] 2026-04-06 05:14:24,741 | INFO     | . stage-out = 4 s
[2026-04-06 01:15:09] 2026-04-06 05:14:24,741 | INFO     | . log creation = 0 s
[2026-04-06 01:15:09] 2026-04-06 05:14:24,741 | INFO     | ..............................
[2026-04-06 01:15:09] 2026-04-06 05:14:24,849 | INFO     | 
[2026-04-06 01:15:09] 2026-04-06 05:14:24,854 | INFO     | job summary report
[2026-04-06 01:15:09] 2026-04-06 05:14:24,854 | INFO     | --------------------------------------------------
[2026-04-06 01:15:09] 2026-04-06 05:14:24,854 | INFO     | PanDA job id: 7065656303
[2026-04-06 01:15:09] 2026-04-06 05:14:24,855 | INFO     | task id: 48997948
[2026-04-06 01:15:09] 2026-04-06 05:14:24,855 | INFO     | errors: (none)
[2026-04-06 01:15:09] 2026-04-06 05:14:24,855 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-06 01:15:09] 2026-04-06 05:14:24,855 | INFO     | pilot state: finished 
[2026-04-06 01:15:09] 2026-04-06 05:14:24,855 | INFO     | transexitcode: 0
[2026-04-06 01:15:09] 2026-04-06 05:14:24,855 | INFO     | exeerrorcode: 0
[2026-04-06 01:15:09] 2026-04-06 05:14:24,855 | INFO     | exeerrordiag: 
[2026-04-06 01:15:09] 2026-04-06 05:14:24,855 | INFO     | exitcode: 0
[2026-04-06 01:15:09] 2026-04-06 05:14:24,855 | INFO     | exitmsg: OK
[2026-04-06 01:15:09] 2026-04-06 05:14:24,856 | INFO     | cpuconsumptiontime: 62342 s
[2026-04-06 01:15:09] 2026-04-06 05:14:24,856 | INFO     | nevents: 400
[2026-04-06 01:15:09] 2026-04-06 05:14:24,856 | INFO     | neventsw: 0
[2026-04-06 01:15:09] 2026-04-06 05:14:24,856 | INFO     | pid: 1273988
[2026-04-06 01:15:09] 2026-04-06 05:14:24,856 | INFO     | pgrp: 1273988
[2026-04-06 01:15:09] 2026-04-06 05:14:24,856 | INFO     | corecount: 8
[2026-04-06 01:15:09] 2026-04-06 05:14:24,856 | INFO     | event service: False
[2026-04-06 01:15:09] 2026-04-06 05:14:24,856 | INFO     | sizes: {0: 2279109, 1: 2279794, 2: 2279822, 3: 2280283, 14: 2280283, 35943: 2320800, 35947: 2329798, 35949: 2329854, 35952: 2330048}
[2026-04-06 01:15:09] 2026-04-06 05:14:24,856 | INFO     | --------------------------------------------------
[2026-04-06 01:15:09] 2026-04-06 05:14:24,857 | INFO     | 
[2026-04-06 01:15:09] 2026-04-06 05:14:24,857 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-06 01:15:09] 2026-04-06 05:14:24,991 | INFO     | time since job start (35967s) is within the limit (345600.0s)
[2026-04-06 01:15:09] 2026-04-06 05:14:24,997 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,997 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,997 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,998 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,999 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-06 01:15:09] 2026-04-06 05:14:24,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,999 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-06 01:15:09] 2026-04-06 05:14:24,999 | INFO     | job 7065656303 has completed (purged errors)
[2026-04-06 01:15:09] 2026-04-06 05:14:24,999 | INFO     | overall cleanup function is called
[2026-04-06 01:15:09] 2026-04-06 05:14:26,013 | INFO     | --- collectZombieJob: --- 10, [1273988]
[2026-04-06 01:15:09] 2026-04-06 05:14:26,013 | INFO     | zombie collector waiting for pid 1273988
[2026-04-06 01:15:09] 2026-04-06 05:14:26,013 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-06 01:15:09] 2026-04-06 05:14:26,013 | INFO     | collected zombie processes
[2026-04-06 01:15:09] 2026-04-06 05:14:26,013 | INFO     | will attempt to kill all subprocesses of pid=1273988
[2026-04-06 01:15:09] 2026-04-06 05:14:26,615 | INFO     | process IDs to be killed: [1273988] (in reverse order)
[2026-04-06 01:15:09] 2026-04-06 05:14:27,034 | WARNING  | found no corresponding commands to process id(s)
[2026-04-06 01:15:09] 2026-04-06 05:14:27,035 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-06 01:15:09] 2026-04-06 05:14:27,062 | INFO     | did not find any defunct processes belonging to 1273988
[2026-04-06 01:15:09] 2026-04-06 05:14:27,114 | INFO     | did not find any defunct processes belonging to 1273988
[2026-04-06 01:15:09] 2026-04-06 05:14:27,116 | INFO     | ready for new job
[2026-04-06 01:15:09] 2026-04-06 05:14:27,117 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-06 01:15:09] 2026-04-06 05:14:27,125 | INFO     | **************************************
[2026-04-06 01:15:09] 2026-04-06 05:14:27,126 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-06 01:15:09] 2026-04-06 05:14:27,126 | INFO     | **************************************
[2026-04-06 01:15:09] 2026-04-06 05:14:27,126 | INFO     | 
[2026-04-06 01:15:09] 2026-04-06 05:14:27,134 | INFO     | architecture information:
[2026-04-06 01:15:09] 2026-04-06 05:14:27,138 | INFO     | executing command: cat /etc/os-release
[2026-04-06 01:15:09] 2026-04-06 05:14:27,248 | INFO     | cat /etc/os-release:
[2026-04-06 01:15:09] NAME="CentOS Linux"
[2026-04-06 01:15:09] VERSION="7 (Core)"
[2026-04-06 01:15:09] ID="centos"
[2026-04-06 01:15:09] ID_LIKE="rhel fedora"
[2026-04-06 01:15:09] VERSION_ID="7"
[2026-04-06 01:15:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-06 01:15:09] ANSI_COLOR="0;31"
[2026-04-06 01:15:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-06 01:15:09] HOME_URL="https://www.centos.org/"
[2026-04-06 01:15:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-06 01:15:09] 
[2026-04-06 01:15:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-06 01:15:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-06 01:15:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-06 01:15:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-06 01:15:09] 
[2026-04-06 01:15:09] 2026-04-06 05:14:27,248 | INFO     | **************************************
[2026-04-06 01:15:09] 2026-04-06 05:14:27,752 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-06 01:15:09] 2026-04-06 05:14:27,862 | INFO     | sufficient remaining disk space (76237766656 B)
[2026-04-06 01:15:09] 2026-04-06 05:14:27,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-06 01:15:09] 2026-04-06 05:14:27,863 | INFO     | current server update state: UPDATING_FINAL
[2026-04-06 01:15:09] 2026-04-06 05:14:27,863 | INFO     | update_server=False
[2026-04-06 01:15:09] 2026-04-06 05:14:27,863 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-06 01:15:09] 2026-04-06 05:14:27,866 | INFO     | all data control threads have been joined
[2026-04-06 01:15:09] 2026-04-06 05:14:28,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-06 01:15:09] 2026-04-06 05:14:28,158 | INFO     | aborting loop
[2026-04-06 01:15:09] 2026-04-06 05:14:28,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-06 01:15:09] 2026-04-06 05:14:28,607 | INFO     | all payload control threads have been joined
[2026-04-06 01:15:09] 2026-04-06 05:14:28,789 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-06 01:15:09] 2026-04-06 05:14:28,869 | INFO     | [job] retrieve thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:28,872 | INFO     | [data] control thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:29,014 | INFO     | all job control threads have been joined
[2026-04-06 01:15:09] 2026-04-06 05:14:29,122 | INFO     | [payload] execute_payloads thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:29,164 | INFO     | [job] job monitor thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:29,304 | INFO     | [payload] validate_pre thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:29,336 | INFO     | [job] create_data_payload thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:29,441 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:29,614 | INFO     | [payload] control thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:29,866 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-06 01:15:09] 2026-04-06 05:14:30,020 | INFO     | [job] control thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:30,191 | INFO     | [payload] failed_post thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:30,192 | INFO     | [payload] validate_post thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:30,211 | INFO     | [data] copytool_in thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:30,260 | INFO     | [job] validate thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:30,796 | INFO     | [data] copytool_out thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:30,872 | INFO     | [job] queue monitor thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:32,404 | INFO     | [data] queue_monitor thread has finished
[2026-04-06 01:15:09] 2026-04-06 05:14:58,576 | INFO     | PID=1261148 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-06 01:15:09] 2026-04-06 05:14:58,576 | INFO     | .. there are 18 such processes running
[2026-04-06 01:15:09] 2026-04-06 05:14:58,577 | INFO     | found 0 job(s) in 20 queues
[2026-04-06 01:15:09] 2026-04-06 05:14:58,577 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-06 01:15:09] 2026-04-06 05:14:58,577 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-06 01:15:09] 2026-04-06 05:15:01,992 | INFO     | [monitor] cgroup control has ended
[2026-04-06 01:15:09] 2026-04-06 05:15:03,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140504072169280)>', '<ExcThread(monitor, started 140503060305664)>']
[2026-04-06 01:15:09] 2026-04-06 05:15:04,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-06 01:15:09] 2026-04-06 05:15:04,613 | INFO     | [monitor] control thread has ended
[2026-04-06 01:15:09] 2026-04-06 05:15:08,885 | INFO     | all workflow threads have been joined
[2026-04-06 01:15:09] 2026-04-06 05:15:08,885 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-06 01:15:09] 2026-04-06 05:15:08,885 | INFO     | traces error code: 0
[2026-04-06 01:15:09] 2026-04-06 05:15:08,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-06 01:15:09] 2026-04-06 05:15:09,273 [wrapper] ==== pilot stdout END ====
[2026-04-06 01:15:09] 2026-04-06 05:15:09,316 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-06 01:15:09] 2026-04-06 05:15:09,359 [wrapper] pilotpid: 1261148
[2026-04-06 01:15:09] 2026-04-06 05:15:09,391 [wrapper] Pilot exit status: 0
[2026-04-06 01:15:09] 2026-04-06 05:15:09,561 [wrapper] pandaids: 7065656303
[2026-04-06 01:15:09] 2026-04-06 05:15:09,901 [wrapper] cleanup supervisor_pilot 2782060 1261149
[2026-04-06 01:15:09] 2026-04-06 05:15:09,904 [wrapper] Test setup, not cleaning
[2026-04-06 01:15:09] 2026-04-06 05:15:09,907 [wrapper] apfmon messages muted
[2026-04-06 01:15:09] 2026-04-06 05:15:09,909 [wrapper] ==== wrapper stdout END ====
[2026-04-06 01:15:09] 2026-04-06 05:15:09,912 [wrapper] ==== wrapper stderr END ====
[2026-04-06 01:15:09]  *** Error codes and diagnostics ***
[2026-04-06 01:15:09]     "exeErrorCode": 0,
[2026-04-06 01:15:09]     "exeErrorDiag": "",
[2026-04-06 01:15:09]     "pilotErrorCode": 0,
[2026-04-06 01:15:09]     "pilotErrorDiag": "",
[2026-04-06 01:15:09]  *** Listing of results directory ***
[2026-04-06 01:15:10] total 565892
[2026-04-06 01:15:10] -rw-r--r--. 1 boincer umatlas    585013 Mar 28 10:05 pilot3.tar.gz
[2026-04-06 01:15:10] -rwx------. 1 boincer umatlas     36322 Mar 28 10:09 runpilot2-wrapper.sh
[2026-04-06 01:15:10] -rw-r--r--. 1 boincer umatlas      5118 Mar 28 10:09 queuedata.json
[2026-04-06 01:15:10] -rw-r--r--. 1 boincer umatlas       100 Apr  5 15:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-06 01:15:10] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  5 15:12 run_atlas
[2026-04-06 01:15:10] -rw-r--r--. 1 boincer umatlas       105 Apr  5 15:12 job.xml
[2026-04-06 01:15:10] -rw-r--r--. 2 boincer umatlas 325135828 Apr  5 15:12 EVNT.48997945._000110.pool.root.1
[2026-04-06 01:15:10] -rw-r--r--. 2 boincer umatlas     15845 Apr  5 15:12 start_atlas.sh
[2026-04-06 01:15:10] drwxrwx--x. 2 boincer umatlas      4096 Apr  5 15:12 shared
[2026-04-06 01:15:10] -rw-r--r--. 2 boincer umatlas    597540 Apr  5 15:12 input.tar.gz
[2026-04-06 01:15:10] -rw-r--r--. 1 boincer umatlas         0 Apr  5 15:12 boinc_lockfile
[2026-04-06 01:15:10] -rw-r--r--. 1 boincer umatlas      2572 Apr  5 15:12 pandaJob.out
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas        57 Apr  5 15:12 setup.sh.local
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas   1005096 Apr  5 15:14 agis_schedconf.cvmfs.json
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas       440 Apr  5 15:14 workernode_map.json
[2026-04-06 01:15:10] drwx------. 5 boincer umatlas      4096 Apr  5 15:14 pilot3
[2026-04-06 01:15:10] -rw-r--r--. 1 boincer umatlas      6659 Apr  6 01:11 init_data.xml
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas 240848765 Apr  6 01:13 HITS.48997948._003424.pool.root.1
[2026-04-06 01:15:10] -rw-r--r--. 1 boincer umatlas       531 Apr  6 01:13 boinc_task_state.xml
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas      1040 Apr  6 01:14 memory_monitor_summary.json
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas   1511579 Apr  6 01:14 agis_ddmendpoints.agis.ALL.json
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas    705681 Apr  6 01:14 log.48997948._003424.job.log.tgz.1
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas      6383 Apr  6 01:14 heartbeat.json
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas        95 Apr  6 01:14 pilot_heartbeat.json
[2026-04-06 01:15:10] -rw-r--r--. 1 boincer umatlas        28 Apr  6 01:15 wrapper_checkpoint.txt
[2026-04-06 01:15:10] -rw-r--r--. 1 boincer umatlas      8192 Apr  6 01:15 boinc_mmap_file
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas      4820 Apr  6 01:15 pilotlog.txt
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas   4072177 Apr  6 01:15 log.48997948._003424.job.log.1
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas       357 Apr  6 01:15 output.list
[2026-04-06 01:15:10] -rw-r--r--. 1 boincer umatlas       620 Apr  6 01:15 runtime_log
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas   4792320 Apr  6 01:15 result.tar.gz
[2026-04-06 01:15:10] -rw-r--r--. 1 boincer umatlas      9332 Apr  6 01:15 runtime_log.err
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas       656 Apr  6 01:15 PQQKDmkWjQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmXfKKDmc9E85n.diag
[2026-04-06 01:15:10] -rw-r--r--. 1 boincer umatlas     21396 Apr  6 01:15 stderr.txt
[2026-04-06 01:15:10] HITS file was successfully produced:
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas 240848765 Apr  6 01:13 shared/HITS.pool.root.1
[2026-04-06 01:15:10]  *** Contents of shared directory: ***
[2026-04-06 01:15:10] total 558004
[2026-04-06 01:15:10] -rw-r--r--. 2 boincer umatlas 325135828 Apr  5 15:12 ATLAS.root_0
[2026-04-06 01:15:10] -rw-r--r--. 2 boincer umatlas     15845 Apr  5 15:12 start_atlas.sh
[2026-04-06 01:15:10] -rw-r--r--. 2 boincer umatlas    597540 Apr  5 15:12 input.tar.gz
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas 240848765 Apr  6 01:13 HITS.pool.root.1
[2026-04-06 01:15:10] -rw-------. 1 boincer umatlas   4792320 Apr  6 01:15 result.tar.gz
01:15:11 (1251497): run_atlas exited; CPU time 63625.173534
01:15:11 (1251497): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN