Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:40:18 (1219057): wrapper (7.7.26015): starting
08:40:18 (1219057): wrapper: running run_atlas (--nthreads 8)
[2026-04-05 08:40:18] Arguments: --nthreads 8
[2026-04-05 08:40:18] Threads: 8
[2026-04-05 08:40:18] Checking for CVMFS
[2026-04-05 08:40:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 08:40:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 08:40:18] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 08:40:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 08:40:18] 2.13.3.0 9119 145070 336692 158112 0 51 20253985 39288832 8118 16776704 0 92875961 99.637 88273109 35755 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-05 08:40:18] CVMFS is ok
[2026-04-05 08:40:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-05 08:40:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-05 08:40:18] Further information can be found at the LHC@home message board.
[2026-04-05 08:40:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 08:40:18] Checking for apptainer binary...
[2026-04-05 08:40:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-05 08:40:18] Running /usr/bin/apptainer --version
[2026-04-05 08:40:18] apptainer version 1.4.5-2.el9
[2026-04-05 08:40:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 08:40:18] c-210-12.aglt2.org
[2026-04-05 08:40:18] apptainer works
[2026-04-05 08:40:19] Set ATHENA_PROC_NUMBER=8
[2026-04-05 08:40:19] Set ATHENA_CORE_NUMBER=8
[2026-04-05 08:40:19] Starting ATLAS job with PandaID=7069735997
[2026-04-05 08:40:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-05 11:38:58]  *** The last 200 lines of the pilot log: ***
[2026-04-05 11:38:58] 2026-04-05 15:38:08,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-05 11:38:58] 2026-04-05 15:38:08,801 | INFO     | fitting pss+swap vs Time
[2026-04-05 11:38:58] 2026-04-05 15:38:08,802 | INFO     | sum of square deviations: 1662200356.8571396
[2026-04-05 11:38:58] 2026-04-05 15:38:08,803 | INFO     | sum of deviations: -37446925145.285706
[2026-04-05 11:38:58] 2026-04-05 15:38:08,803 | INFO     | mean x: 1775398166.6285715
[2026-04-05 11:38:58] 2026-04-05 15:38:08,803 | INFO     | mean y: 2581473.4571428574
[2026-04-05 11:38:58] 2026-04-05 15:38:08,803 | INFO     | intersect: 39999686500.26807
[2026-04-05 11:38:58] 2026-04-05 15:38:08,804 | INFO     | chi2: 2.344610896825171
[2026-04-05 11:38:58] 2026-04-05 15:38:08,804 | INFO     | sum of square deviations: 1523822007.323525
[2026-04-05 11:38:58] 2026-04-05 15:38:08,805 | INFO     | sum of deviations: -25097308804.91176
[2026-04-05 11:38:58] 2026-04-05 15:38:08,805 | INFO     | mean x: 1775398014.1470587
[2026-04-05 11:38:58] 2026-04-05 15:38:08,805 | INFO     | mean y: 2594800.0764705883
[2026-04-05 11:38:58] 2026-04-05 15:38:08,805 | INFO     | intersect: 29243353890.39699
[2026-04-05 11:38:58] 2026-04-05 15:38:08,806 | INFO     | chi2: 1.6695954763422047
[2026-04-05 11:38:58] 2026-04-05 15:38:08,806 | INFO     | current chi2=1.6695954763422047 (change=28.790082883134342 %)
[2026-04-05 11:38:58] 2026-04-05 15:38:08,806 | INFO     | sum of square deviations: 1393340412.9939444
[2026-04-05 11:38:58] 2026-04-05 15:38:08,807 | INFO     | sum of deviations: -23819993477.01211
[2026-04-05 11:38:58] 2026-04-05 15:38:08,807 | INFO     | mean x: 1775397861.6606061
[2026-04-05 11:38:58] 2026-04-05 15:38:08,808 | INFO     | mean y: 2596294.3212121213
[2026-04-05 11:38:58] 2026-04-05 15:38:08,808 | INFO     | intersect: 30354091944.250866
[2026-04-05 11:38:58] 2026-04-05 15:38:08,808 | INFO     | chi2: 1.6662675790098045
[2026-04-05 11:38:58] 2026-04-05 15:38:08,808 | INFO     | current chi2=1.6662675790098045 (change=0.19932357146121948 %)
[2026-04-05 11:38:58] 2026-04-05 15:38:08,808 | INFO     | right removable region: 164
[2026-04-05 11:38:58] 2026-04-05 15:38:08,809 | INFO     | sum of square deviations: 1523754907.323525
[2026-04-05 11:38:58] 2026-04-05 15:38:08,810 | INFO     | sum of deviations: -61201439502.205894
[2026-04-05 11:38:58] 2026-04-05 15:38:08,810 | INFO     | mean x: 1775398319.1470587
[2026-04-05 11:38:58] 2026-04-05 15:38:08,810 | INFO     | mean y: 2607236.8882352943
[2026-04-05 11:38:58] 2026-04-05 15:38:08,810 | INFO     | intersect: 71311275251.25586
[2026-04-05 11:38:58] 2026-04-05 15:38:08,810 | INFO     | chi2: 0.9983267617859078
[2026-04-05 11:38:58] 2026-04-05 15:38:08,810 | INFO     | current chi2=0.9983267617859078 (change=57.42036501076838 %)
[2026-04-05 11:38:58] 2026-04-05 15:38:08,811 | INFO     | sum of square deviations: 1393216582.6666665
[2026-04-05 11:38:58] 2026-04-05 15:38:08,812 | INFO     | sum of deviations: -53674941969.99996
[2026-04-05 11:38:58] 2026-04-05 15:38:08,812 | INFO     | mean x: 1775398471.6666667
[2026-04-05 11:38:58] 2026-04-05 15:38:08,812 | INFO     | mean y: 2598431.290909091
[2026-04-05 11:38:58] 2026-04-05 15:38:08,812 | INFO     | intersect: 68401446913.22474
[2026-04-05 11:38:58] 2026-04-05 15:38:08,813 | INFO     | chi2: 0.9896236434225014
[2026-04-05 11:38:58] 2026-04-05 15:38:08,813 | INFO     | current chi2=0.9896236434225014 (change=0.87177051608207 %)
[2026-04-05 11:38:58] 2026-04-05 15:38:08,813 | INFO     | left removable region: 20
[2026-04-05 11:38:58] 2026-04-05 15:38:08,813 | INFO     | sum of square deviations: 926209418.4930569
[2026-04-05 11:38:58] 2026-04-05 15:38:08,814 | INFO     | sum of deviations: -24348421068.486122
[2026-04-05 11:38:58] 2026-04-05 15:38:08,814 | INFO     | mean x: 1775398441.2430556
[2026-04-05 11:38:58] 2026-04-05 15:38:08,814 | INFO     | mean y: 2593197.013888889
[2026-04-05 11:38:58] 2026-04-05 15:38:08,814 | INFO     | intersect: 46674704221.378174
[2026-04-05 11:38:58] 2026-04-05 15:38:08,815 | INFO     | chi2: 0.2326586811141889
[2026-04-05 11:38:58] 2026-04-05 15:38:08,815 | INFO     | current memory leak: -26.29 B/s (using 144 data points, chi2=0.23)
[2026-04-05 11:38:58] 2026-04-05 15:38:08,815 | INFO     | could have reported an average CPU frequency of 2620 MHz (9 samples)
[2026-04-05 11:38:58] 2026-04-05 15:38:08,816 | INFO     | ..............................
[2026-04-05 11:38:58] 2026-04-05 15:38:08,816 | INFO     | . Timing measurements:
[2026-04-05 11:38:58] 2026-04-05 15:38:08,816 | INFO     | . get job = 0 s
[2026-04-05 11:38:58] 2026-04-05 15:38:08,816 | INFO     | . initial setup = 6 s
[2026-04-05 11:38:58] 2026-04-05 15:38:08,816 | INFO     | . payload setup = 9 s
[2026-04-05 11:38:58] 2026-04-05 15:38:08,816 | INFO     | . stage-in = 0 s
[2026-04-05 11:38:58] 2026-04-05 15:38:08,816 | INFO     | . payload execution = 10630 s
[2026-04-05 11:38:58] 2026-04-05 15:38:08,816 | INFO     | . stage-out = 0 s
[2026-04-05 11:38:58] 2026-04-05 15:38:08,816 | INFO     | . log creation = 0 s
[2026-04-05 11:38:58] 2026-04-05 15:38:08,816 | INFO     | ..............................
[2026-04-05 11:38:58] 2026-04-05 15:38:09,166 | INFO     | 
[2026-04-05 11:38:58] 2026-04-05 15:38:09,167 | INFO     | job summary report
[2026-04-05 11:38:58] 2026-04-05 15:38:09,167 | INFO     | --------------------------------------------------
[2026-04-05 11:38:58] 2026-04-05 15:38:09,167 | INFO     | PanDA job id: 7069735997
[2026-04-05 11:38:58] 2026-04-05 15:38:09,167 | INFO     | task id: 49263200
[2026-04-05 11:38:58] 2026-04-05 15:38:09,167 | INFO     | errors: (none)
[2026-04-05 11:38:58] 2026-04-05 15:38:09,167 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-05 11:38:58] 2026-04-05 15:38:09,167 | INFO     | pilot state: finished 
[2026-04-05 11:38:58] 2026-04-05 15:38:09,167 | INFO     | transexitcode: 0
[2026-04-05 11:38:58] 2026-04-05 15:38:09,167 | INFO     | exeerrorcode: 0
[2026-04-05 11:38:58] 2026-04-05 15:38:09,167 | INFO     | exeerrordiag: 
[2026-04-05 11:38:58] 2026-04-05 15:38:09,168 | INFO     | exitcode: 0
[2026-04-05 11:38:58] 2026-04-05 15:38:09,168 | INFO     | exitmsg: OK
[2026-04-05 11:38:58] 2026-04-05 15:38:09,168 | INFO     | cpuconsumptiontime: 50925 s
[2026-04-05 11:38:58] 2026-04-05 15:38:09,168 | INFO     | nevents: 400
[2026-04-05 11:38:58] 2026-04-05 15:38:09,168 | INFO     | neventsw: 0
[2026-04-05 11:38:58] 2026-04-05 15:38:09,168 | INFO     | pid: 1227381
[2026-04-05 11:38:58] 2026-04-05 15:38:09,168 | INFO     | pgrp: 1227381
[2026-04-05 11:38:58] 2026-04-05 15:38:09,168 | INFO     | corecount: 8
[2026-04-05 11:38:58] 2026-04-05 15:38:09,168 | INFO     | event service: False
[2026-04-05 11:38:58] 2026-04-05 15:38:09,168 | INFO     | sizes: {0: 2279984, 1: 2280274, 11: 2280274, 10640: 2309223, 10641: 2318221, 10643: 2318663}
[2026-04-05 11:38:58] 2026-04-05 15:38:09,169 | INFO     | --------------------------------------------------
[2026-04-05 11:38:58] 2026-04-05 15:38:09,169 | INFO     | 
[2026-04-05 11:38:58] 2026-04-05 15:38:09,169 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-05 11:38:58] 2026-04-05 15:38:09,190 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,190 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,190 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,190 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,190 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,191 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,191 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,191 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,191 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,191 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,191 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,192 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,192 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,192 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,192 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,192 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,192 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-05 11:38:58] 2026-04-05 15:38:09,192 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,193 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-05 11:38:58] 2026-04-05 15:38:09,193 | INFO     | job 7069735997 has completed (purged errors)
[2026-04-05 11:38:58] 2026-04-05 15:38:09,193 | INFO     | overall cleanup function is called
[2026-04-05 11:38:58] 2026-04-05 15:38:10,202 | INFO     | --- collectZombieJob: --- 10, [1227381]
[2026-04-05 11:38:58] 2026-04-05 15:38:10,202 | INFO     | zombie collector waiting for pid 1227381
[2026-04-05 11:38:58] 2026-04-05 15:38:10,202 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-05 11:38:58] 2026-04-05 15:38:10,202 | INFO     | collected zombie processes
[2026-04-05 11:38:58] 2026-04-05 15:38:10,203 | INFO     | will attempt to kill all subprocesses of pid=1227381
[2026-04-05 11:38:58] 2026-04-05 15:38:10,420 | INFO     | process IDs to be killed: [1227381] (in reverse order)
[2026-04-05 11:38:58] 2026-04-05 15:38:10,490 | WARNING  | found no corresponding commands to process id(s)
[2026-04-05 11:38:58] 2026-04-05 15:38:10,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-05 11:38:58] 2026-04-05 15:38:10,497 | INFO     | did not find any defunct processes belonging to 1227381
[2026-04-05 11:38:58] 2026-04-05 15:38:10,504 | INFO     | did not find any defunct processes belonging to 1227381
[2026-04-05 11:38:58] 2026-04-05 15:38:10,505 | INFO     | ready for new job
[2026-04-05 11:38:58] 2026-04-05 15:38:10,505 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-05 11:38:58] 2026-04-05 15:38:10,507 | INFO     | **************************************
[2026-04-05 11:38:58] 2026-04-05 15:38:10,507 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-05 11:38:58] 2026-04-05 15:38:10,507 | INFO     | **************************************
[2026-04-05 11:38:58] 2026-04-05 15:38:10,507 | INFO     | 
[2026-04-05 11:38:58] 2026-04-05 15:38:10,509 | INFO     | architecture information:
[2026-04-05 11:38:58] 2026-04-05 15:38:10,509 | INFO     | executing command: cat /etc/os-release
[2026-04-05 11:38:58] 2026-04-05 15:38:10,522 | INFO     | cat /etc/os-release:
[2026-04-05 11:38:58] NAME="CentOS Linux"
[2026-04-05 11:38:58] VERSION="7 (Core)"
[2026-04-05 11:38:58] ID="centos"
[2026-04-05 11:38:58] ID_LIKE="rhel fedora"
[2026-04-05 11:38:58] VERSION_ID="7"
[2026-04-05 11:38:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-05 11:38:58] ANSI_COLOR="0;31"
[2026-04-05 11:38:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-05 11:38:58] HOME_URL="https://www.centos.org/"
[2026-04-05 11:38:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-05 11:38:58] 
[2026-04-05 11:38:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-05 11:38:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-05 11:38:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-05 11:38:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-05 11:38:58] 
[2026-04-05 11:38:58] 2026-04-05 15:38:10,522 | INFO     | **************************************
[2026-04-05 11:38:58] 2026-04-05 15:38:11,024 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-05 11:38:58] 2026-04-05 15:38:11,037 | INFO     | sufficient remaining disk space (53791948800 B)
[2026-04-05 11:38:58] 2026-04-05 15:38:11,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-05 11:38:58] 2026-04-05 15:38:11,038 | INFO     | current server update state: UPDATING_FINAL
[2026-04-05 11:38:58] 2026-04-05 15:38:11,038 | INFO     | update_server=False
[2026-04-05 11:38:58] 2026-04-05 15:38:11,038 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-05 11:38:58] 2026-04-05 15:38:11,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-05 11:38:58] 2026-04-05 15:38:11,524 | INFO     | all data control threads have been joined
[2026-04-05 11:38:58] 2026-04-05 15:38:12,043 | INFO     | [job] retrieve thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:12,116 | INFO     | all payload control threads have been joined
[2026-04-05 11:38:58] 2026-04-05 15:38:12,206 | INFO     | [job] create_data_payload thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:12,267 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-05 11:38:58] 2026-04-05 15:38:12,423 | INFO     | [data] copytool_in thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:12,501 | INFO     | [payload] execute_payloads thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:12,530 | INFO     | [data] control thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:12,636 | INFO     | all job control threads have been joined
[2026-04-05 11:38:58] 2026-04-05 15:38:12,638 | WARNING  | process 1227381 can no longer be monitored (due to stat problems) - aborting
[2026-04-05 11:38:58] 2026-04-05 15:38:12,755 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 11:38:58] 2026-04-05 15:38:12,756 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 11:38:58] 2026-04-05 15:38:12,756 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-05 11:38:58] 2026-04-05 15:38:12,756 | WARNING  | maxPSS not found in memory monitor output
[2026-04-05 11:38:58] 2026-04-05 15:38:12,890 | INFO     | job.realtimelogging is not enabled
[2026-04-05 11:38:58] 2026-04-05 15:38:12,918 | INFO     | number of running child processes to parent process 1227381: 1
[2026-04-05 11:38:58] 2026-04-05 15:38:12,918 | INFO     | maximum number of monitored processes: 6
[2026-04-05 11:38:58] 2026-04-05 15:38:12,918 | INFO     | aborting job monitoring since job object (job id=7069735997) has expired
[2026-04-05 11:38:58] 2026-04-05 15:38:12,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-05 11:38:58] 2026-04-05 15:38:12,919 | INFO     | will abort loop
[2026-04-05 11:38:58] 2026-04-05 15:38:12,994 | INFO     | [payload] validate_post thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:13,104 | INFO     | [job] validate thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:13,121 | INFO     | [payload] control thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:13,184 | INFO     | [payload] validate_pre thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:13,582 | INFO     | [payload] failed_post thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:13,641 | INFO     | [job] control thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:13,895 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:13,923 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-05 11:38:58] 2026-04-05 15:38:13,924 | INFO     | [job] job monitor thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:14,272 | INFO     | [data] copytool_out thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:14,928 | INFO     | [job] queue monitor thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:15,044 | INFO     | [data] queue_monitor thread has finished
[2026-04-05 11:38:58] 2026-04-05 15:38:40,883 | INFO     | PID=1223016 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-05 11:38:58] 2026-04-05 15:38:40,883 | INFO     | .. there are 6 such processes running
[2026-04-05 11:38:58] 2026-04-05 15:38:40,885 | INFO     | found 0 job(s) in 20 queues
[2026-04-05 11:38:58] 2026-04-05 15:38:40,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-05 11:38:58] 2026-04-05 15:38:40,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-05 11:38:58] 2026-04-05 15:38:52,201 | INFO     | [monitor] cgroup control has ended
[2026-04-05 11:38:58] 2026-04-05 15:38:53,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139685845817152)>', '<ExcThread(monitor, started 139685473015552)>']
[2026-04-05 11:38:58] 2026-04-05 15:38:53,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-05 11:38:58] 2026-04-05 15:38:53,937 | INFO     | [monitor] control thread has ended
[2026-04-05 11:38:58] 2026-04-05 15:38:58,427 | INFO     | all workflow threads have been joined
[2026-04-05 11:38:58] 2026-04-05 15:38:58,428 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-05 11:38:58] 2026-04-05 15:38:58,428 | INFO     | traces error code: 0
[2026-04-05 11:38:58] 2026-04-05 15:38:58,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-05 11:38:58] 2026-04-05 15:38:58,603 [wrapper] ==== pilot stdout END ====
[2026-04-05 11:38:58] 2026-04-05 15:38:58,606 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-05 11:38:58] 2026-04-05 15:38:58,609 [wrapper] pilotpid: 1223016
[2026-04-05 11:38:58] 2026-04-05 15:38:58,612 [wrapper] Pilot exit status: 0
[2026-04-05 11:38:58] 2026-04-05 15:38:58,629 [wrapper] pandaids: 7069735997
[2026-04-05 11:38:58] 2026-04-05 15:38:58,683 [wrapper] cleanup supervisor_pilot 1501134 1223017
[2026-04-05 11:38:58] 2026-04-05 15:38:58,686 [wrapper] Test setup, not cleaning
[2026-04-05 11:38:58] 2026-04-05 15:38:58,690 [wrapper] apfmon messages muted
[2026-04-05 11:38:58] 2026-04-05 15:38:58,693 [wrapper] ==== wrapper stdout END ====
[2026-04-05 11:38:58] 2026-04-05 15:38:58,696 [wrapper] ==== wrapper stderr END ====
[2026-04-05 11:38:58]  *** Error codes and diagnostics ***
[2026-04-05 11:38:58]     "exeErrorCode": 0,
[2026-04-05 11:38:58]     "exeErrorDiag": "",
[2026-04-05 11:38:58]     "pilotErrorCode": 0,
[2026-04-05 11:38:58]     "pilotErrorDiag": "",
[2026-04-05 11:38:58]  *** Listing of results directory ***
[2026-04-05 11:38:58] total 413516
[2026-04-05 11:38:58] -rw-r--r--. 1 boincer umatlas    585013 Mar 29 11:34 pilot3.tar.gz
[2026-04-05 11:38:58] -rwx------. 1 boincer umatlas     36322 Mar 29 11:35 runpilot2-wrapper.sh
[2026-04-05 11:38:58] -rw-r--r--. 1 boincer umatlas      5118 Mar 29 11:36 queuedata.json
[2026-04-05 11:38:58] -rw-r--r--. 1 boincer umatlas       100 Apr  5 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-05 11:38:58] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  5 08:40 run_atlas
[2026-04-05 11:38:58] -rw-r--r--. 1 boincer umatlas       105 Apr  5 08:40 job.xml
[2026-04-05 11:38:58] -rw-r--r--. 2 boincer umatlas 223986120 Apr  5 08:40 EVNT.49263198._000068.pool.root.1
[2026-04-05 11:38:58] -rw-r--r--. 2 boincer umatlas    597532 Apr  5 08:40 input.tar.gz
[2026-04-05 11:38:58] -rw-r--r--. 2 boincer umatlas     15845 Apr  5 08:40 start_atlas.sh
[2026-04-05 11:38:58] drwxrwx--x. 2 boincer umatlas      4096 Apr  5 08:40 shared
[2026-04-05 11:38:58] -rw-r--r--. 1 boincer umatlas         0 Apr  5 08:40 boinc_lockfile
[2026-04-05 11:38:58] -rw-r--r--. 1 boincer umatlas      2572 Apr  5 08:40 pandaJob.out
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas        57 Apr  5 08:40 setup.sh.local
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas   1005096 Apr  5 08:40 agis_schedconf.cvmfs.json
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas   1511579 Apr  5 08:40 agis_ddmendpoints.agis.ALL.json
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas       441 Apr  5 08:40 workernode_map.json
[2026-04-05 11:38:58] drwx------. 5 boincer umatlas      4096 Apr  5 08:40 pilot3
[2026-04-05 11:38:58] -rw-r--r--. 1 boincer umatlas      6661 Apr  5 11:31 init_data.xml
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas 191796182 Apr  5 11:37 HITS.49263200._001679.pool.root.1
[2026-04-05 11:38:58] -rw-r--r--. 1 boincer umatlas       530 Apr  5 11:37 boinc_task_state.xml
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas      1057 Apr  5 11:38 memory_monitor_summary.json
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas    401713 Apr  5 11:38 log.49263200._001679.job.log.tgz.1
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas      6414 Apr  5 11:38 heartbeat.json
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas        95 Apr  5 11:38 pilot_heartbeat.json
[2026-04-05 11:38:58] -rw-r--r--. 1 boincer umatlas      8192 Apr  5 11:38 boinc_mmap_file
[2026-04-05 11:38:58] -rw-r--r--. 1 boincer umatlas        28 Apr  5 11:38 wrapper_checkpoint.txt
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas      5735 Apr  5 11:38 pilotlog.txt
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas   1455130 Apr  5 11:38 log.49263200._001679.job.log.1
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas       357 Apr  5 11:38 output.list
[2026-04-05 11:38:58] -rw-r--r--. 1 boincer umatlas       620 Apr  5 11:38 runtime_log
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas   1873920 Apr  5 11:38 result.tar.gz
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas       660 Apr  5 11:38 UnnKDmuL7Q9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDm8tKKDm8maN2m.diag
[2026-04-05 11:38:58] -rw-r--r--. 1 boincer umatlas      9342 Apr  5 11:38 runtime_log.err
[2026-04-05 11:38:58] -rw-r--r--. 1 boincer umatlas     21223 Apr  5 11:38 stderr.txt
[2026-04-05 11:38:58] HITS file was successfully produced:
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas 191796182 Apr  5 11:37 shared/HITS.pool.root.1
[2026-04-05 11:38:58]  *** Contents of shared directory: ***
[2026-04-05 11:38:58] total 408480
[2026-04-05 11:38:58] -rw-r--r--. 2 boincer umatlas 223986120 Apr  5 08:40 ATLAS.root_0
[2026-04-05 11:38:58] -rw-r--r--. 2 boincer umatlas    597532 Apr  5 08:40 input.tar.gz
[2026-04-05 11:38:58] -rw-r--r--. 2 boincer umatlas     15845 Apr  5 08:40 start_atlas.sh
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas 191796182 Apr  5 11:37 HITS.pool.root.1
[2026-04-05 11:38:58] -rw-------. 1 boincer umatlas   1873920 Apr  5 11:38 result.tar.gz
11:39:00 (1219057): run_atlas exited; CPU time 51079.644654
11:39:00 (1219057): called boinc_finish(0)

</stderr_txt>
]]>

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