Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:10:43 (2820615): wrapper (7.7.26015): starting
08:10:43 (2820615): wrapper: running run_atlas (--nthreads 8)
[2026-04-05 08:10:43] Arguments: --nthreads 8
[2026-04-05 08:10:43] Threads: 8
[2026-04-05 08:10:43] Checking for CVMFS
[2026-04-05 08:10:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 08:10:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 08:10:43] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 08:10:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 08:10:44] 2.13.3.0 9714 217187 591140 158111 0 746 20876762 21042177 18895 16776704 0 898538697 99.444 1233456245 32645 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-05 08:10:44] CVMFS is ok
[2026-04-05 08:10:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-05 08:10:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-05 08:10:44] Further information can be found at the LHC@home message board.
[2026-04-05 08:10:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 08:10:44] Checking for apptainer binary...
[2026-04-05 08:10:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-05 08:10:44] Running /usr/bin/apptainer --version
[2026-04-05 08:10:44] apptainer version 1.4.5-2.el9
[2026-04-05 08:10:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 08:10:44] c-6-1.aglt2.org
[2026-04-05 08:10:44] apptainer works
[2026-04-05 08:10:44] Set ATHENA_PROC_NUMBER=8
[2026-04-05 08:10:44] Set ATHENA_CORE_NUMBER=8
[2026-04-05 08:10:44] Starting ATLAS job with PandaID=7072071481
[2026-04-05 08:10:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:00:03 (2820615): BOINC client no longer exists - exiting
15:00:03 (2820615): timer handler: client dead, exiting
15:12:19 (3710319): wrapper (7.7.26015): starting
15:12:19 (3710319): wrapper: running run_atlas (--nthreads 8)
[2026-04-05 15:12:19] Arguments: --nthreads 8
[2026-04-05 15:12:19] Threads: 8
[2026-04-05 15:12:19] This job has been restarted, cleaning up previous attempt
[2026-04-05 15:12:19] Checking for CVMFS
[2026-04-05 15:12:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 15:12:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 15:12:19] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 15:12:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 15:12:20] 2.13.3.0 9714 217609 562232 158121 0 168 13940455 21042177 9433 16776704 0 898890610 99.444 1234284008 32646 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-05 15:12:20] CVMFS is ok
[2026-04-05 15:12:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-05 15:12:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-05 15:12:20] Further information can be found at the LHC@home message board.
[2026-04-05 15:12:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 15:12:20] Checking for apptainer binary...
[2026-04-05 15:12:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-05 15:12:20] Running /usr/bin/apptainer --version
[2026-04-05 15:12:20] apptainer version 1.4.5-2.el9
[2026-04-05 15:12:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 15:12:20] c-6-1.aglt2.org
[2026-04-05 15:12:20] apptainer works
[2026-04-05 15:12:20] Set ATHENA_PROC_NUMBER=8
[2026-04-05 15:12:20] Set ATHENA_CORE_NUMBER=8
[2026-04-05 15:12:20] Starting ATLAS job with PandaID=7072071481
[2026-04-05 15:12:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-06 00:52:54]  *** The last 200 lines of the pilot log: ***
[2026-04-06 00:52:54] 2026-04-06 04:51:53,181 | INFO     | log transfer has been attempted: DONE
[2026-04-06 00:52:54] 2026-04-06 04:51:53,181 | INFO     | job 7072071481 has finished - writing final server update
[2026-04-06 00:52:54] 2026-04-06 04:51:53,181 | INFO     | total number of processed events: 400 (read)
[2026-04-06 00:52:54] 2026-04-06 04:51:53,203 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7072071481/memory_monitor_summary.json (trf name=prmon)
[2026-04-06 00:52:54] 2026-04-06 04:51:53,204 | INFO     | extracted standard info from prmon json
[2026-04-06 00:52:54] 2026-04-06 04:51:53,204 | INFO     | extracted standard memory fields from prmon json
[2026-04-06 00:52:54] 2026-04-06 04:51:53,204 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-06 00:52:54] 2026-04-06 04:51:53,205 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-06 00:52:54] 2026-04-06 04:51:53,205 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-06 00:52:54] 2026-04-06 04:51:53,216 | INFO     | fitting pss+swap vs Time
[2026-04-06 00:52:54] 2026-04-06 04:51:53,217 | INFO     | sum of square deviations: 57428021573.97185
[2026-04-06 00:52:54] 2026-04-06 04:51:53,226 | INFO     | sum of deviations: 32976480926.740273
[2026-04-06 00:52:54] 2026-04-06 04:51:53,226 | INFO     | mean x: 1775433739.9403508
[2026-04-06 00:52:54] 2026-04-06 04:51:53,226 | INFO     | mean y: 2509104.698245614
[2026-04-06 00:52:54] 2026-04-06 04:51:53,226 | INFO     | intersect: -1016985477.5140325
[2026-04-06 00:52:54] 2026-04-06 04:51:53,227 | INFO     | chi2: 2.107159993185781
[2026-04-06 00:52:54] 2026-04-06 04:51:53,228 | INFO     | sum of square deviations: 55930299696.006775
[2026-04-06 00:52:54] 2026-04-06 04:51:53,236 | INFO     | sum of deviations: 68593858634.76647
[2026-04-06 00:52:54] 2026-04-06 04:51:53,237 | INFO     | mean x: 1775433587.4530973
[2026-04-06 00:52:54] 2026-04-06 04:51:53,237 | INFO     | mean y: 2512705.0477876104
[2026-04-06 00:52:54] 2026-04-06 04:51:53,237 | INFO     | intersect: -2174908856.7013083
[2026-04-06 00:52:54] 2026-04-06 04:51:53,238 | INFO     | chi2: 1.4193497380275206
[2026-04-06 00:52:54] 2026-04-06 04:51:53,238 | INFO     | current chi2=1.4193497380275206 (change=32.64157716464477 %)
[2026-04-06 00:52:54] 2026-04-06 04:51:53,239 | INFO     | sum of square deviations: 54458822795.28554
[2026-04-06 00:52:54] 2026-04-06 04:51:53,247 | INFO     | sum of deviations: 67825968500.39297
[2026-04-06 00:52:54] 2026-04-06 04:51:53,247 | INFO     | mean x: 1775433434.9642856
[2026-04-06 00:52:54] 2026-04-06 04:51:53,248 | INFO     | mean y: 2512625.469642857
[2026-04-06 00:52:54] 2026-04-06 04:51:53,248 | INFO     | intersect: -2208708367.813687
[2026-04-06 00:52:54] 2026-04-06 04:51:53,249 | INFO     | chi2: 1.4194719992928408
[2026-04-06 00:52:54] 2026-04-06 04:51:53,249 | INFO     | current chi2=1.4194719992928408 (change=-0.008613892830256896 %)
[2026-04-06 00:52:54] 2026-04-06 04:51:53,249 | INFO     | right removable region: 559
[2026-04-06 00:52:54] 2026-04-06 04:51:53,250 | INFO     | sum of square deviations: 55929798886.00672
[2026-04-06 00:52:54] 2026-04-06 04:51:53,258 | INFO     | sum of deviations: -55251845210.037155
[2026-04-06 00:52:54] 2026-04-06 04:51:53,258 | INFO     | mean x: 1775433892.4530973
[2026-04-06 00:52:54] 2026-04-06 04:51:53,258 | INFO     | mean y: 2518052.621238938
[2026-04-06 00:52:54] 2026-04-06 04:51:53,259 | INFO     | intersect: 1756431003.5046594
[2026-04-06 00:52:54] 2026-04-06 04:51:53,259 | INFO     | chi2: 0.7277225748710439
[2026-04-06 00:52:54] 2026-04-06 04:51:53,260 | INFO     | current chi2=0.7277225748710439 (change=65.46429425272014 %)
[2026-04-06 00:52:54] 2026-04-06 04:51:53,260 | INFO     | sum of square deviations: 54457855760.35545
[2026-04-06 00:52:54] 2026-04-06 04:51:53,268 | INFO     | sum of deviations: -61326637491.5571
[2026-04-06 00:52:54] 2026-04-06 04:51:53,269 | INFO     | mean x: 1775434044.9660714
[2026-04-06 00:52:54] 2026-04-06 04:51:53,269 | INFO     | mean y: 2518678.1285714284
[2026-04-06 00:52:54] 2026-04-06 04:51:53,269 | INFO     | intersect: 2001888622.933987
[2026-04-06 00:52:54] 2026-04-06 04:51:53,270 | INFO     | chi2: 0.7122029159129382
[2026-04-06 00:52:54] 2026-04-06 04:51:53,270 | INFO     | current chi2=0.7122029159129382 (change=2.132633986358862 %)
[2026-04-06 00:52:54] 2026-04-06 04:51:53,270 | INFO     | left removable region: 20
[2026-04-06 00:52:54] 2026-04-06 04:51:53,271 | INFO     | sum of square deviations: 48558654364.67158
[2026-04-06 00:52:54] 2026-04-06 04:51:53,278 | INFO     | sum of deviations: -23229345337.758907
[2026-04-06 00:52:54] 2026-04-06 04:51:53,279 | INFO     | mean x: 1775434014.5120595
[2026-04-06 00:52:54] 2026-04-06 04:51:53,279 | INFO     | mean y: 2522195.962894249
[2026-04-06 00:52:54] 2026-04-06 04:51:53,279 | INFO     | intersect: 851849064.4090196
[2026-04-06 00:52:54] 2026-04-06 04:51:53,280 | INFO     | chi2: 0.01805885900480965
[2026-04-06 00:52:54] 2026-04-06 04:51:53,280 | INFO     | current memory leak: -0.48 B/s (using 539 data points, chi2=0.02)
[2026-04-06 00:52:54] 2026-04-06 04:51:53,281 | INFO     | could have reported an average CPU frequency of 2639 MHz (23 samples)
[2026-04-06 00:52:54] 2026-04-06 04:51:53,281 | INFO     | ..............................
[2026-04-06 00:52:54] 2026-04-06 04:51:53,281 | INFO     | . Timing measurements:
[2026-04-06 00:52:54] 2026-04-06 04:51:53,282 | INFO     | . get job = 0 s
[2026-04-06 00:52:54] 2026-04-06 04:51:53,282 | INFO     | . initial setup = 2 s
[2026-04-06 00:52:54] 2026-04-06 04:51:53,282 | INFO     | . payload setup = 10 s
[2026-04-06 00:52:54] 2026-04-06 04:51:53,282 | INFO     | . stage-in = 0 s
[2026-04-06 00:52:54] 2026-04-06 04:51:53,282 | INFO     | . payload execution = 34722 s
[2026-04-06 00:52:54] 2026-04-06 04:51:53,282 | INFO     | . stage-out = 7 s
[2026-04-06 00:52:54] 2026-04-06 04:51:53,282 | INFO     | . log creation = 1 s
[2026-04-06 00:52:54] 2026-04-06 04:51:53,282 | INFO     | ..............................
[2026-04-06 00:52:54] 2026-04-06 04:51:53,632 | INFO     | time since job start (34757s) is within the limit (345600.0s)
[2026-04-06 00:52:54] 2026-04-06 04:51:53,751 | INFO     | 
[2026-04-06 00:52:54] 2026-04-06 04:51:53,752 | INFO     | job summary report
[2026-04-06 00:52:54] 2026-04-06 04:51:53,752 | INFO     | --------------------------------------------------
[2026-04-06 00:52:54] 2026-04-06 04:51:53,752 | INFO     | PanDA job id: 7072071481
[2026-04-06 00:52:54] 2026-04-06 04:51:53,752 | INFO     | task id: 48967085
[2026-04-06 00:52:54] 2026-04-06 04:51:53,752 | INFO     | errors: (none)
[2026-04-06 00:52:54] 2026-04-06 04:51:53,752 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-06 00:52:54] 2026-04-06 04:51:53,752 | INFO     | pilot state: finished 
[2026-04-06 00:52:54] 2026-04-06 04:51:53,752 | INFO     | transexitcode: 0
[2026-04-06 00:52:54] 2026-04-06 04:51:53,752 | INFO     | exeerrorcode: 0
[2026-04-06 00:52:54] 2026-04-06 04:51:53,753 | INFO     | exeerrordiag: 
[2026-04-06 00:52:54] 2026-04-06 04:51:53,753 | INFO     | exitcode: 0
[2026-04-06 00:52:54] 2026-04-06 04:51:53,754 | INFO     | exitmsg: OK
[2026-04-06 00:52:54] 2026-04-06 04:51:53,754 | INFO     | cpuconsumptiontime: 61801 s
[2026-04-06 00:52:54] 2026-04-06 04:51:53,754 | INFO     | nevents: 400
[2026-04-06 00:52:54] 2026-04-06 04:51:53,754 | INFO     | neventsw: 0
[2026-04-06 00:52:54] 2026-04-06 04:51:53,754 | INFO     | pid: 3728614
[2026-04-06 00:52:54] 2026-04-06 04:51:53,754 | INFO     | pgrp: 3728614
[2026-04-06 00:52:54] 2026-04-06 04:51:53,754 | INFO     | corecount: 8
[2026-04-06 00:52:54] 2026-04-06 04:51:53,754 | INFO     | event service: False
[2026-04-06 00:52:54] 2026-04-06 04:51:53,754 | INFO     | sizes: {0: 2279763, 1: 2280224, 12: 2280224, 34735: 2319915, 34744: 2328941, 34745: 2329319}
[2026-04-06 00:52:54] 2026-04-06 04:51:53,754 | INFO     | --------------------------------------------------
[2026-04-06 00:52:54] 2026-04-06 04:51:53,755 | INFO     | 
[2026-04-06 00:52:54] 2026-04-06 04:51:53,755 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-06 00:52:54] 2026-04-06 04:51:53,778 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,778 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,778 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,779 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,780 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,780 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,780 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-06 00:52:54] 2026-04-06 04:51:53,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,780 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-06 00:52:54] 2026-04-06 04:51:53,781 | INFO     | job 7072071481 has completed (purged errors)
[2026-04-06 00:52:54] 2026-04-06 04:51:53,781 | INFO     | overall cleanup function is called
[2026-04-06 00:52:54] 2026-04-06 04:51:54,794 | INFO     | --- collectZombieJob: --- 10, [3728614]
[2026-04-06 00:52:54] 2026-04-06 04:51:54,798 | INFO     | zombie collector waiting for pid 3728614
[2026-04-06 00:52:54] 2026-04-06 04:51:54,814 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-06 00:52:54] 2026-04-06 04:51:54,815 | INFO     | collected zombie processes
[2026-04-06 00:52:54] 2026-04-06 04:51:54,815 | INFO     | will attempt to kill all subprocesses of pid=3728614
[2026-04-06 00:52:54] 2026-04-06 04:51:55,577 | INFO     | process IDs to be killed: [3728614] (in reverse order)
[2026-04-06 00:52:54] 2026-04-06 04:51:55,796 | WARNING  | found no corresponding commands to process id(s)
[2026-04-06 00:52:54] 2026-04-06 04:51:55,797 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-06 00:52:54] 2026-04-06 04:51:55,812 | INFO     | did not find any defunct processes belonging to 3728614
[2026-04-06 00:52:54] 2026-04-06 04:51:55,827 | INFO     | did not find any defunct processes belonging to 3728614
[2026-04-06 00:52:54] 2026-04-06 04:51:55,827 | INFO     | ready for new job
[2026-04-06 00:52:54] 2026-04-06 04:51:55,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-06 00:52:54] 2026-04-06 04:51:55,832 | INFO     | **************************************
[2026-04-06 00:52:54] 2026-04-06 04:51:55,832 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-06 00:52:54] 2026-04-06 04:51:55,832 | INFO     | **************************************
[2026-04-06 00:52:54] 2026-04-06 04:51:55,832 | INFO     | 
[2026-04-06 00:52:54] 2026-04-06 04:51:55,877 | INFO     | architecture information:
[2026-04-06 00:52:54] 2026-04-06 04:51:55,916 | INFO     | executing command: cat /etc/os-release
[2026-04-06 00:52:54] 2026-04-06 04:51:56,168 | INFO     | cat /etc/os-release:
[2026-04-06 00:52:54] NAME="CentOS Linux"
[2026-04-06 00:52:54] VERSION="7 (Core)"
[2026-04-06 00:52:54] ID="centos"
[2026-04-06 00:52:54] ID_LIKE="rhel fedora"
[2026-04-06 00:52:54] VERSION_ID="7"
[2026-04-06 00:52:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-06 00:52:54] ANSI_COLOR="0;31"
[2026-04-06 00:52:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-06 00:52:54] HOME_URL="https://www.centos.org/"
[2026-04-06 00:52:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-06 00:52:54] 
[2026-04-06 00:52:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-06 00:52:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-06 00:52:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-06 00:52:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-06 00:52:54] 
[2026-04-06 00:52:54] 2026-04-06 04:51:56,168 | INFO     | **************************************
[2026-04-06 00:52:54] 2026-04-06 04:51:56,672 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-06 00:52:54] 2026-04-06 04:51:56,757 | INFO     | sufficient remaining disk space (53110374400 B)
[2026-04-06 00:52:54] 2026-04-06 04:51:56,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-06 00:52:54] 2026-04-06 04:51:56,757 | INFO     | current server update state: UPDATING_FINAL
[2026-04-06 00:52:54] 2026-04-06 04:51:56,757 | INFO     | update_server=False
[2026-04-06 00:52:54] 2026-04-06 04:51:56,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-06 00:52:54] 2026-04-06 04:51:56,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-06 00:52:54] 2026-04-06 04:51:56,760 | INFO     | aborting loop
[2026-04-06 00:52:54] 2026-04-06 04:51:56,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-06 00:52:54] 2026-04-06 04:51:57,096 | INFO     | all data control threads have been joined
[2026-04-06 00:52:54] 2026-04-06 04:51:57,744 | INFO     | all job control threads have been joined
[2026-04-06 00:52:54] 2026-04-06 04:51:57,763 | INFO     | [job] retrieve thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:51:57,766 | INFO     | [job] job monitor thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:51:58,026 | INFO     | [payload] failed_post thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:51:58,026 | INFO     | [payload] validate_post thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:51:58,103 | INFO     | [data] control thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:51:58,137 | INFO     | [payload] validate_pre thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:51:58,144 | INFO     | all payload control threads have been joined
[2026-04-06 00:52:54] 2026-04-06 04:51:58,172 | INFO     | [job] validate thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:51:58,178 | INFO     | [payload] execute_payloads thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:51:58,185 | INFO     | [data] copytool_in thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:51:58,656 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:51:58,751 | INFO     | [job] control thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:51:58,766 | INFO     | [data] copytool_out thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:51:58,774 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-06 00:52:54] 2026-04-06 04:51:58,817 | INFO     | [job] create_data_payload thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:51:59,150 | INFO     | [payload] control thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:51:59,241 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-06 00:52:54] 2026-04-06 04:51:59,780 | INFO     | [job] queue monitor thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:52:03,266 | INFO     | [data] queue_monitor thread has finished
[2026-04-06 00:52:54] 2026-04-06 04:52:28,269 | INFO     | PID=3721628 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-06 00:52:54] 2026-04-06 04:52:28,271 | INFO     | .. there are 13 such processes running
[2026-04-06 00:52:54] 2026-04-06 04:52:28,272 | INFO     | found 0 job(s) in 20 queues
[2026-04-06 00:52:54] 2026-04-06 04:52:28,272 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-06 00:52:54] 2026-04-06 04:52:28,272 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-06 00:52:54] 2026-04-06 04:52:46,125 | INFO     | [monitor] cgroup control has ended
[2026-04-06 00:52:54] 2026-04-06 04:52:47,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139773111392064)>', '<ExcThread(monitor, started 139772748076800)>']
[2026-04-06 00:52:54] 2026-04-06 04:52:48,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-06 00:52:54] 2026-04-06 04:52:48,393 | INFO     | [monitor] control thread has ended
[2026-04-06 00:52:54] 2026-04-06 04:52:52,545 | INFO     | all workflow threads have been joined
[2026-04-06 00:52:54] 2026-04-06 04:52:52,546 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-06 00:52:54] 2026-04-06 04:52:52,546 | INFO     | traces error code: 0
[2026-04-06 00:52:54] 2026-04-06 04:52:52,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-06 00:52:54] 2026-04-06 04:52:54,458 [wrapper] ==== pilot stdout END ====
[2026-04-06 00:52:54] 2026-04-06 04:52:54,477 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-06 00:52:54] 2026-04-06 04:52:54,492 [wrapper] pilotpid: 3721628
[2026-04-06 00:52:54] 2026-04-06 04:52:54,517 [wrapper] Pilot exit status: 0
[2026-04-06 00:52:54] 2026-04-06 04:52:54,614 [wrapper] pandaids: 7072071481 7072071481
[2026-04-06 00:52:54] 2026-04-06 04:52:54,738 [wrapper] cleanup supervisor_pilot  743833 3721629
[2026-04-06 00:52:54] 2026-04-06 04:52:54,741 [wrapper] Test setup, not cleaning
[2026-04-06 00:52:54] 2026-04-06 04:52:54,744 [wrapper] apfmon messages muted
[2026-04-06 00:52:54] 2026-04-06 04:52:54,747 [wrapper] ==== wrapper stdout END ====
[2026-04-06 00:52:54] 2026-04-06 04:52:54,751 [wrapper] ==== wrapper stderr END ====
[2026-04-06 00:52:54]  *** Error codes and diagnostics ***
[2026-04-06 00:52:54]     "exeErrorCode": 0,
[2026-04-06 00:52:54]     "exeErrorDiag": "",
[2026-04-06 00:52:54]     "pilotErrorCode": 0,
[2026-04-06 00:52:54]     "pilotErrorDiag": "",
[2026-04-06 00:52:54]  *** Listing of results directory ***
[2026-04-06 00:52:54] total 622936
[2026-04-06 00:52:54] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-04-06 00:52:54] -rw-r--r--. 1 boincer umatlas    585013 Mar 29 00:04 pilot3.tar.gz
[2026-04-06 00:52:54] -rwx------. 1 boincer umatlas     36322 Mar 29 00:08 runpilot2-wrapper.sh
[2026-04-06 00:52:54] -rw-r--r--. 1 boincer umatlas      5118 Mar 29 00:11 queuedata.json
[2026-04-06 00:52:54] -rw-r--r--. 1 boincer umatlas       100 Apr  5 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-06 00:52:54] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  5 08:10 run_atlas
[2026-04-06 00:52:54] -rw-r--r--. 1 boincer umatlas       105 Apr  5 08:10 job.xml
[2026-04-06 00:52:54] -rw-r--r--. 3 boincer umatlas 214717050 Apr  5 08:10 EVNT.48967083._001053.pool.root.1
[2026-04-06 00:52:54] -rw-r--r--. 3 boincer umatlas 214717050 Apr  5 08:10 ATLAS.root_0
[2026-04-06 00:52:54] -rw-r--r--. 2 boincer umatlas     15845 Apr  5 08:10 start_atlas.sh
[2026-04-06 00:52:54] drwxrwx--x. 2 boincer umatlas      4096 Apr  5 08:10 shared
[2026-04-06 00:52:54] -rw-r--r--. 2 boincer umatlas    597539 Apr  5 08:10 input.tar.gz
[2026-04-06 00:52:54] -rw-r--r--. 1 boincer umatlas         0 Apr  5 08:10 boinc_lockfile
[2026-04-06 00:52:54] -rw-r--r--. 1 boincer umatlas      2566 Apr  5 15:12 pandaJob.out
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas        57 Apr  5 15:12 setup.sh.local
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas   1005096 Apr  5 15:12 agis_schedconf.cvmfs.json
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas       438 Apr  5 15:12 workernode_map.json
[2026-04-06 00:52:54] -rw-r--r--. 1 boincer umatlas      6659 Apr  6 00:48 init_data.xml
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas 195267245 Apr  6 00:50 HITS.48967085._030382.pool.root.1
[2026-04-06 00:52:54] -rw-r--r--. 1 boincer umatlas       531 Apr  6 00:50 boinc_task_state.xml
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas      1054 Apr  6 00:51 memory_monitor_summary.json
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas   1511579 Apr  6 00:51 agis_ddmendpoints.agis.ALL.json
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas    690031 Apr  6 00:51 log.48967085._030382.job.log.tgz.1
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas      6405 Apr  6 00:51 heartbeat.json
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas        96 Apr  6 00:52 pilot_heartbeat.json
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas      4820 Apr  6 00:52 pilotlog.txt
[2026-04-06 00:52:54] -rw-r--r--. 1 boincer umatlas      8192 Apr  6 00:52 boinc_mmap_file
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas   3928833 Apr  6 00:52 log.48967085._030382.job.log.1
[2026-04-06 00:52:54] -rw-r--r--. 1 boincer umatlas        29 Apr  6 00:52 wrapper_checkpoint.txt
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas       357 Apr  6 00:52 output.list
[2026-04-06 00:52:54] -rw-r--r--. 1 boincer umatlas       620 Apr  6 00:52 runtime_log
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas   4638720 Apr  6 00:52 result.tar.gz
[2026-04-06 00:52:54] -rw-r--r--. 1 boincer umatlas      9412 Apr  6 00:52 runtime_log.err
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas       785 Apr  6 00:52 1WSMDmKdwQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmtZJKDmXnOYAn.diag
[2026-04-06 00:52:54] -rw-r--r--. 1 boincer umatlas     23400 Apr  6 00:52 stderr.txt
[2026-04-06 00:52:54] HITS file was successfully produced:
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas 195267245 Apr  6 00:50 shared/HITS.pool.root.1
[2026-04-06 00:52:54]  *** Contents of shared directory: ***
[2026-04-06 00:52:54] total 405516
[2026-04-06 00:52:54] -rw-r--r--. 3 boincer umatlas 214717050 Apr  5 08:10 ATLAS.root_0
[2026-04-06 00:52:54] -rw-r--r--. 2 boincer umatlas     15845 Apr  5 08:10 start_atlas.sh
[2026-04-06 00:52:54] -rw-r--r--. 2 boincer umatlas    597539 Apr  5 08:10 input.tar.gz
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas 195267245 Apr  6 00:50 HITS.pool.root.1
[2026-04-06 00:52:54] -rw-------. 1 boincer umatlas   4638720 Apr  6 00:52 result.tar.gz
00:52:56 (3710319): run_atlas exited; CPU time 63018.555265
00:52:56 (3710319): called boinc_finish(0)

</stderr_txt>
]]>

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