Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:41:13 (22753): wrapper (7.7.26015): starting
01:41:13 (22753): wrapper: running run_atlas (--nthreads 12)
[2026-04-05 01:41:13] Arguments: --nthreads 12
[2026-04-05 01:41:13] Threads: 12
[2026-04-05 01:41:13] Checking for CVMFS
[2026-04-05 01:41:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 01:41:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 01:41:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 01:41:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 01:41:13] 2.11.2.0 2984 474428 91328 158101 0 1 17513697 20275200 1 130560 1 201116575 99.958 26167193 16861 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-05 01:41:13] CVMFS is ok
[2026-04-05 01:41:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-05 01:41:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-05 01:41:13] Further information can be found at the LHC@home message board.
[2026-04-05 01:41:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 01:41:13] Checking for apptainer binary...
[2026-04-05 01:41:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-05 01:41:13] Running /usr/bin/apptainer --version
[2026-04-05 01:41:13] apptainer version 1.3.2-1.el7
[2026-04-05 01:41:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 01:41:15] c-205-26.aglt2.org
[2026-04-05 01:41:15] apptainer works
[2026-04-05 01:41:15] Set ATHENA_PROC_NUMBER=12
[2026-04-05 01:41:15] Set ATHENA_CORE_NUMBER=12
[2026-04-05 01:41:15] Starting ATLAS job with PandaID=7065222530
[2026-04-05 01:41:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-05 04:05:57]  *** The last 200 lines of the pilot log: ***
[2026-04-05 04:05:57] 2026-04-05 08:05:07,656 | INFO     | intersect: -56437539836.7509
[2026-04-05 04:05:57] 2026-04-05 08:05:07,656 | INFO     | chi2: 1.6910133584359759
[2026-04-05 04:05:57] 2026-04-05 08:05:07,656 | INFO     | current chi2=1.6910133584359759 (change=-0.11224352624378356 %)
[2026-04-05 04:05:57] 2026-04-05 08:05:07,657 | INFO     | right removable region: 135
[2026-04-05 04:05:57] 2026-04-05 08:05:07,657 | INFO     | sum of square deviations: 779958810.0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,657 | INFO     | sum of deviations: 1408730004.5000005
[2026-04-05 04:05:57] 2026-04-05 08:05:07,657 | INFO     | mean x: 1775372151.5
[2026-04-05 04:05:57] 2026-04-05 08:05:07,658 | INFO     | mean y: 2707374.713235294
[2026-04-05 04:05:57] 2026-04-05 08:05:07,658 | INFO     | intersect: -3203897880.469113
[2026-04-05 04:05:57] 2026-04-05 08:05:07,658 | INFO     | chi2: 0.17022518702340886
[2026-04-05 04:05:57] 2026-04-05 08:05:07,658 | INFO     | current chi2=0.17022518702340886 (change=89.92224083117253 %)
[2026-04-05 04:05:57] 2026-04-05 08:05:07,658 | INFO     | sum of square deviations: 697054930.0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,659 | INFO     | sum of deviations: -4623133148.0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,659 | INFO     | mean x: 1775372304.0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,659 | INFO     | mean y: 2718474.4427480916
[2026-04-05 04:05:57] 2026-04-05 08:05:07,659 | INFO     | intersect: 11777662163.118092
[2026-04-05 04:05:57] 2026-04-05 08:05:07,660 | INFO     | chi2: 0.10313544421192437
[2026-04-05 04:05:57] 2026-04-05 08:05:07,660 | INFO     | current chi2=0.10313544421192437 (change=39.41234783443563 %)
[2026-04-05 04:05:57] 2026-04-05 08:05:07,660 | INFO     | sum of square deviations: 620244187.5
[2026-04-05 04:05:57] 2026-04-05 08:05:07,660 | INFO     | sum of deviations: -5011564708.499999
[2026-04-05 04:05:57] 2026-04-05 08:05:07,661 | INFO     | mean x: 1775372456.5
[2026-04-05 04:05:57] 2026-04-05 08:05:07,661 | INFO     | mean y: 2719067.738095238
[2026-04-05 04:05:57] 2026-04-05 08:05:07,661 | INFO     | intersect: 14347704682.679226
[2026-04-05 04:05:57] 2026-04-05 08:05:07,661 | INFO     | chi2: 0.06532486491392517
[2026-04-05 04:05:57] 2026-04-05 08:05:07,661 | INFO     | current chi2=0.06532486491392517 (change=36.66109123484785 %)
[2026-04-05 04:05:57] 2026-04-05 08:05:07,661 | INFO     | sum of square deviations: 549294020.0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,662 | INFO     | sum of deviations: -828242932.9999998
[2026-04-05 04:05:57] 2026-04-05 08:05:07,662 | INFO     | mean x: 1775372609.0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,662 | INFO     | mean y: 2710061.8347107437
[2026-04-05 04:05:57] 2026-04-05 08:05:07,662 | INFO     | intersect: 2679673151.376486
[2026-04-05 04:05:57] 2026-04-05 08:05:07,662 | INFO     | chi2: 0.03841212138892343
[2026-04-05 04:05:57] 2026-04-05 08:05:07,663 | INFO     | current chi2=0.03841212138892343 (change=41.198314853713235 %)
[2026-04-05 04:05:57] 2026-04-05 08:05:07,663 | INFO     | sum of square deviations: 483971865.0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,663 | INFO     | sum of deviations: 2794062696.5000005
[2026-04-05 04:05:57] 2026-04-05 08:05:07,663 | INFO     | mean x: 1775372761.5
[2026-04-05 04:05:57] 2026-04-05 08:05:07,664 | INFO     | mean y: 2701681.9396551726
[2026-04-05 04:05:57] 2026-04-05 08:05:07,664 | INFO     | intersect: -10246866865.375263
[2026-04-05 04:05:57] 2026-04-05 08:05:07,664 | INFO     | chi2: 0.0003131728947188507
[2026-04-05 04:05:57] 2026-04-05 08:05:07,664 | INFO     | current chi2=0.0003131728947188507 (change=99.18470294429207 %)
[2026-04-05 04:05:57] 2026-04-05 08:05:07,664 | INFO     | sum of square deviations: 424045160.0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,665 | INFO     | sum of deviations: 2300460060.0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,665 | INFO     | mean x: 1775372914.0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,665 | INFO     | mean y: 2702936.009009009
[2026-04-05 04:05:57] 2026-04-05 08:05:07,665 | INFO     | intersect: -9628758204.268633
[2026-04-05 04:05:57] 2026-04-05 08:05:07,665 | INFO     | chi2: 0.0002520928196572183
[2026-04-05 04:05:57] 2026-04-05 08:05:07,665 | INFO     | current chi2=0.0002520928196572183 (change=19.50362757813594 %)
[2026-04-05 04:05:57] 2026-04-05 08:05:07,666 | INFO     | left removable region: 60
[2026-04-05 04:05:57] 2026-04-05 08:05:07,666 | INFO     | sum of square deviations: 130793150.0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,666 | INFO     | sum of deviations: 441218123.99999994
[2026-04-05 04:05:57] 2026-04-05 08:05:07,666 | INFO     | mean x: 1775373646.0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,666 | INFO     | mean y: 2708107.7466666666
[2026-04-05 04:05:57] 2026-04-05 08:05:07,666 | INFO     | intersect: -5986344296.657998
[2026-04-05 04:05:57] 2026-04-05 08:05:07,667 | INFO     | chi2: 2.75476821405898e-05
[2026-04-05 04:05:57] 2026-04-05 08:05:07,667 | INFO     | current memory leak: 3.37 B/s (using 75 data points, chi2=0.00)
[2026-04-05 04:05:57] 2026-04-05 08:05:07,667 | INFO     | could have reported an average CPU frequency of 1718 MHz (8 samples)
[2026-04-05 04:05:57] 2026-04-05 08:05:07,667 | INFO     | ..............................
[2026-04-05 04:05:57] 2026-04-05 08:05:07,667 | INFO     | . Timing measurements:
[2026-04-05 04:05:57] 2026-04-05 08:05:07,667 | INFO     | . get job = 0 s
[2026-04-05 04:05:57] 2026-04-05 08:05:07,668 | INFO     | . initial setup = 7 s
[2026-04-05 04:05:57] 2026-04-05 08:05:07,668 | INFO     | . payload setup = 14 s
[2026-04-05 04:05:57] 2026-04-05 08:05:07,668 | INFO     | . stage-in = 0 s
[2026-04-05 04:05:57] 2026-04-05 08:05:07,668 | INFO     | . payload execution = 8575 s
[2026-04-05 04:05:57] 2026-04-05 08:05:07,668 | INFO     | . stage-out = 0 s
[2026-04-05 04:05:57] 2026-04-05 08:05:07,668 | INFO     | . log creation = 0 s
[2026-04-05 04:05:57] 2026-04-05 08:05:07,668 | INFO     | ..............................
[2026-04-05 04:05:57] 2026-04-05 08:05:07,747 | INFO     | 
[2026-04-05 04:05:57] 2026-04-05 08:05:07,747 | INFO     | job summary report
[2026-04-05 04:05:57] 2026-04-05 08:05:07,747 | INFO     | --------------------------------------------------
[2026-04-05 04:05:57] 2026-04-05 08:05:07,747 | INFO     | PanDA job id: 7065222530
[2026-04-05 04:05:57] 2026-04-05 08:05:07,748 | INFO     | task id: 49177017
[2026-04-05 04:05:57] 2026-04-05 08:05:07,748 | INFO     | errors: (none)
[2026-04-05 04:05:57] 2026-04-05 08:05:07,748 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-05 04:05:57] 2026-04-05 08:05:07,748 | INFO     | pilot state: finished 
[2026-04-05 04:05:57] 2026-04-05 08:05:07,748 | INFO     | transexitcode: 0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,748 | INFO     | exeerrorcode: 0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,749 | INFO     | exeerrordiag: 
[2026-04-05 04:05:57] 2026-04-05 08:05:07,749 | INFO     | exitcode: 0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,749 | INFO     | exitmsg: OK
[2026-04-05 04:05:57] 2026-04-05 08:05:07,749 | INFO     | cpuconsumptiontime: 92951 s
[2026-04-05 04:05:57] 2026-04-05 08:05:07,749 | INFO     | nevents: 400
[2026-04-05 04:05:57] 2026-04-05 08:05:07,749 | INFO     | neventsw: 0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,749 | INFO     | pid: 30888
[2026-04-05 04:05:57] 2026-04-05 08:05:07,750 | INFO     | pgrp: 30888
[2026-04-05 04:05:57] 2026-04-05 08:05:07,750 | INFO     | corecount: 12
[2026-04-05 04:05:57] 2026-04-05 08:05:07,750 | INFO     | event service: False
[2026-04-05 04:05:57] 2026-04-05 08:05:07,750 | INFO     | sizes: {0: 2279876, 1: 2280337, 11: 2280337, 8594: 2308358, 8597: 2317440, 8599: 2317578}
[2026-04-05 04:05:57] 2026-04-05 08:05:07,750 | INFO     | --------------------------------------------------
[2026-04-05 04:05:57] 2026-04-05 08:05:07,750 | INFO     | 
[2026-04-05 04:05:57] 2026-04-05 08:05:07,751 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-05 04:05:57] 2026-04-05 08:05:07,773 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,774 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,774 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,774 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,775 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,775 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,775 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,776 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,776 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,776 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,776 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,776 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,776 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-05 04:05:57] 2026-04-05 08:05:07,776 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,777 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-05 04:05:57] 2026-04-05 08:05:07,777 | INFO     | job 7065222530 has completed (purged errors)
[2026-04-05 04:05:57] 2026-04-05 08:05:07,777 | INFO     | overall cleanup function is called
[2026-04-05 04:05:57] 2026-04-05 08:05:08,785 | INFO     | --- collectZombieJob: --- 10, [30888]
[2026-04-05 04:05:57] 2026-04-05 08:05:08,785 | INFO     | zombie collector waiting for pid 30888
[2026-04-05 04:05:57] 2026-04-05 08:05:08,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-05 04:05:57] 2026-04-05 08:05:08,786 | INFO     | collected zombie processes
[2026-04-05 04:05:57] 2026-04-05 08:05:08,786 | INFO     | will attempt to kill all subprocesses of pid=30888
[2026-04-05 04:05:57] 2026-04-05 08:05:08,882 | INFO     | process IDs to be killed: [30888] (in reverse order)
[2026-04-05 04:05:57] 2026-04-05 08:05:08,937 | WARNING  | found no corresponding commands to process id(s)
[2026-04-05 04:05:57] 2026-04-05 08:05:08,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-05 04:05:57] 2026-04-05 08:05:08,942 | INFO     | did not find any defunct processes belonging to 30888
[2026-04-05 04:05:57] 2026-04-05 08:05:08,946 | INFO     | did not find any defunct processes belonging to 30888
[2026-04-05 04:05:57] 2026-04-05 08:05:08,946 | INFO     | ready for new job
[2026-04-05 04:05:57] 2026-04-05 08:05:08,946 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-05 04:05:57] 2026-04-05 08:05:08,947 | INFO     | **************************************
[2026-04-05 04:05:57] 2026-04-05 08:05:08,947 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-05 04:05:57] 2026-04-05 08:05:08,947 | INFO     | **************************************
[2026-04-05 04:05:57] 2026-04-05 08:05:08,948 | INFO     | 
[2026-04-05 04:05:57] 2026-04-05 08:05:08,948 | INFO     | architecture information:
[2026-04-05 04:05:57] 2026-04-05 08:05:08,949 | INFO     | executing command: cat /etc/os-release
[2026-04-05 04:05:57] 2026-04-05 08:05:08,964 | INFO     | cat /etc/os-release:
[2026-04-05 04:05:57] NAME="CentOS Linux"
[2026-04-05 04:05:57] VERSION="7 (Core)"
[2026-04-05 04:05:57] ID="centos"
[2026-04-05 04:05:57] ID_LIKE="rhel fedora"
[2026-04-05 04:05:57] VERSION_ID="7"
[2026-04-05 04:05:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-05 04:05:57] ANSI_COLOR="0;31"
[2026-04-05 04:05:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-05 04:05:57] HOME_URL="https://www.centos.org/"
[2026-04-05 04:05:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-05 04:05:57] 
[2026-04-05 04:05:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-05 04:05:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-05 04:05:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-05 04:05:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-05 04:05:57] 
[2026-04-05 04:05:57] 2026-04-05 08:05:08,964 | INFO     | **************************************
[2026-04-05 04:05:57] 2026-04-05 08:05:09,468 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-05 04:05:57] 2026-04-05 08:05:09,485 | INFO     | sufficient remaining disk space (29229056000 B)
[2026-04-05 04:05:57] 2026-04-05 08:05:09,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-05 04:05:57] 2026-04-05 08:05:09,485 | INFO     | current server update state: UPDATING_FINAL
[2026-04-05 04:05:57] 2026-04-05 08:05:09,485 | INFO     | update_server=False
[2026-04-05 04:05:57] 2026-04-05 08:05:09,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-05 04:05:57] 2026-04-05 08:05:09,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-05 04:05:57] 2026-04-05 08:05:09,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-05 04:05:57] 2026-04-05 08:05:09,817 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-05 04:05:57] 2026-04-05 08:05:09,817 | INFO     | aborting loop
[2026-04-05 04:05:57] 2026-04-05 08:05:10,156 | INFO     | all payload control threads have been joined
[2026-04-05 04:05:57] 2026-04-05 08:05:10,401 | INFO     | all job control threads have been joined
[2026-04-05 04:05:57] 2026-04-05 08:05:10,491 | INFO     | [job] retrieve thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:10,492 | INFO     | [job] queue monitor thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:10,546 | INFO     | all data control threads have been joined
[2026-04-05 04:05:57] 2026-04-05 08:05:10,612 | INFO     | [payload] validate_post thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:10,614 | INFO     | [job] create_data_payload thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:10,617 | INFO     | [payload] validate_pre thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:10,804 | INFO     | [data] copytool_in thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:10,823 | INFO     | [job] job monitor thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:10,914 | INFO     | [payload] failed_post thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:11,162 | INFO     | [payload] control thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:11,407 | INFO     | [job] control thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:11,492 | INFO     | [data] copytool_out thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:11,508 | INFO     | [job] validate thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:11,551 | INFO     | [data] control thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:11,633 | INFO     | [payload] execute_payloads thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:11,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-05 04:05:57] 2026-04-05 08:05:15,669 | INFO     | [data] queue_monitor thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:19,644 | INFO     | job.realtimelogging is not enabled
[2026-04-05 04:05:57] 2026-04-05 08:05:20,646 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-05 04:05:57] 2026-04-05 08:05:39,062 | INFO     | PID=26449 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-05 04:05:57] 2026-04-05 08:05:39,063 | INFO     | found 0 job(s) in 20 queues
[2026-04-05 04:05:57] 2026-04-05 08:05:39,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-05 04:05:57] 2026-04-05 08:05:39,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-05 04:05:57] 2026-04-05 08:05:51,248 | INFO     | [monitor] cgroup control has ended
[2026-04-05 04:05:57] 2026-04-05 08:05:52,514 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139950896359232)>', '<ExcThread(monitor, started 139949496071936)>']
[2026-04-05 04:05:57] 2026-04-05 08:05:53,121 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-05 04:05:57] 2026-04-05 08:05:53,121 | INFO     | [monitor] control thread has ended
[2026-04-05 04:05:57] 2026-04-05 08:05:57,518 | INFO     | all workflow threads have been joined
[2026-04-05 04:05:57] 2026-04-05 08:05:57,519 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-05 04:05:57] 2026-04-05 08:05:57,519 | INFO     | traces error code: 0
[2026-04-05 04:05:57] 2026-04-05 08:05:57,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-05 04:05:57] 2026-04-05 08:05:57,613 [wrapper] ==== pilot stdout END ====
[2026-04-05 04:05:57] 2026-04-05 08:05:57,617 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-05 04:05:57] 2026-04-05 08:05:57,621 [wrapper] pilotpid: 26449
[2026-04-05 04:05:57] 2026-04-05 08:05:57,625 [wrapper] Pilot exit status: 0
[2026-04-05 04:05:57] 2026-04-05 08:05:57,641 [wrapper] pandaids: 7065222530
[2026-04-05 04:05:57] 2026-04-05 08:05:57,687 [wrapper] cleanup supervisor_pilot  2534 26450
[2026-04-05 04:05:57] 2026-04-05 08:05:57,691 [wrapper] Test setup, not cleaning
[2026-04-05 04:05:57] 2026-04-05 08:05:57,695 [wrapper] apfmon messages muted
[2026-04-05 04:05:57] 2026-04-05 08:05:57,699 [wrapper] ==== wrapper stdout END ====
[2026-04-05 04:05:57] 2026-04-05 08:05:57,703 [wrapper] ==== wrapper stderr END ====
[2026-04-05 04:05:57]  *** Error codes and diagnostics ***
[2026-04-05 04:05:57]     "exeErrorCode": 0,
[2026-04-05 04:05:57]     "exeErrorDiag": "",
[2026-04-05 04:05:57]     "pilotErrorCode": 0,
[2026-04-05 04:05:57]     "pilotErrorDiag": "",
[2026-04-05 04:05:57]  *** Listing of results directory ***
[2026-04-05 04:05:57] total 477736
[2026-04-05 04:05:57] -rwx------ 1 boincer umatlas     36322 Mar 25 07:55 runpilot2-wrapper.sh
[2026-04-05 04:05:57] -rw-r--r-- 1 boincer umatlas    585013 Mar 25 07:57 pilot3.tar.gz
[2026-04-05 04:05:57] -rw-r--r-- 1 boincer umatlas      5111 Mar 25 07:59 queuedata.json
[2026-04-05 04:05:57] -rw-r--r-- 1 boincer umatlas       100 Apr  5 01:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-05 04:05:57] -rwxr-xr-x 1 boincer umatlas      7986 Apr  5 01:41 run_atlas
[2026-04-05 04:05:57] -rw-r--r-- 1 boincer umatlas       105 Apr  5 01:41 job.xml
[2026-04-05 04:05:57] -rw-r--r-- 2 boincer umatlas 248886617 Apr  5 01:41 EVNT.49136132._000005.pool.root.1
[2026-04-05 04:05:57] -rw-r--r-- 2 boincer umatlas     15845 Apr  5 01:41 start_atlas.sh
[2026-04-05 04:05:57] drwxrwx--x 2 boincer umatlas      4096 Apr  5 01:41 shared
[2026-04-05 04:05:57] -rw-r--r-- 2 boincer umatlas    597545 Apr  5 01:41 input.tar.gz
[2026-04-05 04:05:57] -rw-r--r-- 1 boincer umatlas         0 Apr  5 01:41 boinc_lockfile
[2026-04-05 04:05:57] -rw-r--r-- 1 boincer umatlas      2618 Apr  5 01:41 pandaJob.out
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas        57 Apr  5 01:41 setup.sh.local
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas   1005104 Apr  5 01:41 agis_schedconf.cvmfs.json
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas   1511579 Apr  5 01:41 agis_ddmendpoints.agis.ALL.json
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas       433 Apr  5 01:41 workernode_map.json
[2026-04-05 04:05:57] drwx------ 5 boincer umatlas      4096 Apr  5 01:41 pilot3
[2026-04-05 04:05:57] -rw-r--r-- 1 boincer umatlas      5953 Apr  5 04:02 init_data.xml
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas 233067503 Apr  5 04:04 HITS.49177017._000109.pool.root.1
[2026-04-05 04:05:57] -rw-r--r-- 1 boincer umatlas       529 Apr  5 04:04 boinc_task_state.xml
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas      1049 Apr  5 04:04 memory_monitor_summary.json
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas    438633 Apr  5 04:05 log.49177017._000109.job.log.tgz.1
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas      6400 Apr  5 04:05 heartbeat.json
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas        95 Apr  5 04:05 pilot_heartbeat.json
[2026-04-05 04:05:57] -rw-r--r-- 1 boincer umatlas      8192 Apr  5 04:05 boinc_mmap_file
[2026-04-05 04:05:57] -rw-r--r-- 1 boincer umatlas        27 Apr  5 04:05 wrapper_checkpoint.txt
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas      4814 Apr  5 04:05 pilotlog.txt
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas   1215986 Apr  5 04:05 log.49177017._000109.job.log.1
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas       357 Apr  5 04:05 output.list
[2026-04-05 04:05:57] -rw-r--r-- 1 boincer umatlas       620 Apr  5 04:05 runtime_log
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas   1669120 Apr  5 04:05 result.tar.gz
[2026-04-05 04:05:57] -rw-r--r-- 1 boincer umatlas      9343 Apr  5 04:05 runtime_log.err
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas       662 Apr  5 04:05 AYcNDmT0bP9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm8PCMDmLxVNun.diag
[2026-04-05 04:05:57] -rw-r--r-- 1 boincer umatlas     20893 Apr  5 04:05 stderr.txt
[2026-04-05 04:05:57] HITS file was successfully produced:
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas 233067503 Apr  5 04:04 shared/HITS.pool.root.1
[2026-04-05 04:05:57]  *** Contents of shared directory: ***
[2026-04-05 04:05:57] total 472900
[2026-04-05 04:05:57] -rw-r--r-- 2 boincer umatlas 248886617 Apr  5 01:41 ATLAS.root_0
[2026-04-05 04:05:57] -rw-r--r-- 2 boincer umatlas     15845 Apr  5 01:41 start_atlas.sh
[2026-04-05 04:05:57] -rw-r--r-- 2 boincer umatlas    597545 Apr  5 01:41 input.tar.gz
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas 233067503 Apr  5 04:04 HITS.pool.root.1
[2026-04-05 04:05:57] -rw------- 1 boincer umatlas   1669120 Apr  5 04:05 result.tar.gz
04:05:59 (22753): run_atlas exited; CPU time 92935.224975
04:05:59 (22753): called boinc_finish(0)

</stderr_txt>
]]>

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