Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:26:29 (1136726): wrapper (7.7.26015): starting
00:26:29 (1136726): wrapper: running run_atlas (--nthreads 8)
[2026-04-05 00:26:29] Arguments: --nthreads 8
[2026-04-05 00:26:29] Threads: 8
[2026-04-05 00:26:29] Checking for CVMFS
[2026-04-05 00:26:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 00:26:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 00:26:30] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 00:26:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 00:26:30] 2.13.3.0 4282 137192 514104 158100 3 21 34732546 39288832 6375 16776704 0 73316861 99.659 91235507 35681 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-05 00:26:30] CVMFS is ok
[2026-04-05 00:26:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-05 00:26:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-05 00:26:30] Further information can be found at the LHC@home message board.
[2026-04-05 00:26:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 00:26:30] Checking for apptainer binary...
[2026-04-05 00:26:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-05 00:26:30] Running /usr/bin/apptainer --version
[2026-04-05 00:26:30] apptainer version 1.4.5-2.el9
[2026-04-05 00:26:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 00:26:30] c-211-32.aglt2.org
[2026-04-05 00:26:30] apptainer works
[2026-04-05 00:26:30] Set ATHENA_PROC_NUMBER=8
[2026-04-05 00:26:30] Set ATHENA_CORE_NUMBER=8
[2026-04-05 00:26:30] Starting ATLAS job with PandaID=7071839833
[2026-04-05 00:26:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:40:04 (1136726): BOINC client no longer exists - exiting
04:40:04 (1136726): timer handler: client dead, exiting
04:49:06 (1547401): wrapper (7.7.26015): starting
04:49:06 (1547401): wrapper: running run_atlas (--nthreads 8)
[2026-04-05 04:49:06] Arguments: --nthreads 8
[2026-04-05 04:49:06] Threads: 8
[2026-04-05 04:49:06] This job has been restarted, cleaning up previous attempt
[2026-04-05 04:49:06] Checking for CVMFS
[2026-04-05 04:49:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 04:49:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 04:49:07] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 04:49:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 04:49:07] 2.13.3.0 4282 137454 515020 158105 1 22 27077548 39288833 6124 16776704 0 73465486 99.658 91267075 35682 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-05 04:49:07] CVMFS is ok
[2026-04-05 04:49:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-05 04:49:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-05 04:49:07] Further information can be found at the LHC@home message board.
[2026-04-05 04:49:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 04:49:07] Checking for apptainer binary...
[2026-04-05 04:49:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-05 04:49:07] Running /usr/bin/apptainer --version
[2026-04-05 04:49:07] apptainer version 1.4.5-2.el9
[2026-04-05 04:49:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 04:49:07] c-211-32.aglt2.org
[2026-04-05 04:49:07] apptainer works
[2026-04-05 04:49:07] Set ATHENA_PROC_NUMBER=8
[2026-04-05 04:49:07] Set ATHENA_CORE_NUMBER=8
[2026-04-05 04:49:07] Starting ATLAS job with PandaID=7071839833
[2026-04-05 04:49:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-06 11:41:39]  *** The last 200 lines of the pilot log: ***
[2026-04-06 11:41:39] 2026-04-06 15:40:43,548 | INFO     | total number of processed events: 400 (read)
[2026-04-06 11:41:39] 2026-04-06 15:40:43,555 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7071839833/memory_monitor_summary.json (trf name=prmon)
[2026-04-06 11:41:39] 2026-04-06 15:40:43,556 | INFO     | extracted standard info from prmon json
[2026-04-06 11:41:39] 2026-04-06 15:40:43,556 | INFO     | extracted standard memory fields from prmon json
[2026-04-06 11:41:39] 2026-04-06 15:40:43,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-06 11:41:39] 2026-04-06 15:40:43,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-06 11:41:39] 2026-04-06 15:40:43,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-06 11:41:39] 2026-04-06 15:40:43,598 | INFO     | fitting pss+swap vs Time
[2026-04-06 11:41:39] 2026-04-06 15:40:43,600 | INFO     | sum of square deviations: 1872424744712.69
[2026-04-06 11:41:39] 2026-04-06 15:40:43,672 | INFO     | time since job start (111083s) is within the limit (345600.0s)
[2026-04-06 11:41:39] 2026-04-06 15:40:43,684 | INFO     | sum of deviations: 1593515024479.9917
[2026-04-06 11:41:39] 2026-04-06 15:40:43,684 | INFO     | mean x: 1775434501.7419
[2026-04-06 11:41:39] 2026-04-06 15:40:43,684 | INFO     | mean y: 2536896.3723228993
[2026-04-06 11:41:39] 2026-04-06 15:40:43,685 | INFO     | intersect: -1508435206.2421315
[2026-04-06 11:41:39] 2026-04-06 15:40:43,687 | INFO     | chi2: 2.214477509540288
[2026-04-06 11:41:39] 2026-04-06 15:40:43,689 | INFO     | sum of square deviations: 1857043733484.9314
[2026-04-06 11:41:39] 2026-04-06 15:40:43,702 | INFO     | monitor loop #6400: job 0:7071839833 is in state 'finished'
[2026-04-06 11:41:39] 2026-04-06 15:40:43,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-06 11:41:39] 2026-04-06 15:40:43,773 | INFO     | sum of deviations: 1699638455916.563
[2026-04-06 11:41:39] 2026-04-06 15:40:43,773 | INFO     | mean x: 1775434349.2439427
[2026-04-06 11:41:39] 2026-04-06 15:40:43,773 | INFO     | mean y: 2537945.960352423
[2026-04-06 11:41:39] 2026-04-06 15:40:43,773 | INFO     | intersect: -1622408436.0332348
[2026-04-06 11:41:39] 2026-04-06 15:40:43,775 | INFO     | chi2: 1.5264594822210311
[2026-04-06 11:41:39] 2026-04-06 15:40:43,776 | INFO     | current chi2=1.5264594822210311 (change=31.069090760921085 %)
[2026-04-06 11:41:39] 2026-04-06 15:40:43,778 | INFO     | sum of square deviations: 1841747188957.1602
[2026-04-06 11:41:39] 2026-04-06 15:40:43,860 | INFO     | sum of deviations: 1686667126047.9155
[2026-04-06 11:41:39] 2026-04-06 15:40:43,860 | INFO     | mean x: 1775434196.7459967
[2026-04-06 11:41:39] 2026-04-06 15:40:43,861 | INFO     | mean y: 2537816.6432909993
[2026-04-06 11:41:39] 2026-04-06 15:40:43,861 | INFO     | intersect: -1623400049.3503325
[2026-04-06 11:41:39] 2026-04-06 15:40:43,863 | INFO     | chi2: 1.5264710719151338
[2026-04-06 11:41:39] 2026-04-06 15:40:43,863 | INFO     | current chi2=1.5264710719151338 (change=-0.0007592533072531683 %)
[2026-04-06 11:41:39] 2026-04-06 15:40:43,863 | INFO     | right removable region: 1810
[2026-04-06 11:41:39] 2026-04-06 15:40:43,866 | INFO     | sum of square deviations: 1857042909374.9336
[2026-04-06 11:41:39] 2026-04-06 15:40:43,948 | INFO     | sum of deviations: 1307317788781.1697
[2026-04-06 11:41:39] 2026-04-06 15:40:43,949 | INFO     | mean x: 1775434654.2439427
[2026-04-06 11:41:39] 2026-04-06 15:40:43,949 | INFO     | mean y: 2539730.3788546254
[2026-04-06 11:41:39] 2026-04-06 15:40:43,949 | INFO     | intersect: -1247327623.0324364
[2026-04-06 11:41:39] 2026-04-06 15:40:43,951 | INFO     | chi2: 0.8318227474703368
[2026-04-06 11:41:39] 2026-04-06 15:40:43,951 | INFO     | current chi2=0.8318227474703368 (change=62.43706500125992 %)
[2026-04-06 11:41:39] 2026-04-06 15:40:43,954 | INFO     | sum of square deviations: 1841745540737.1597
[2026-04-06 11:41:39] 2026-04-06 15:40:44,036 | INFO     | sum of deviations: 1260838894289.5232
[2026-04-06 11:41:39] 2026-04-06 15:40:44,036 | INFO     | mean x: 1775434806.7459967
[2026-04-06 11:41:39] 2026-04-06 15:40:44,036 | INFO     | mean y: 2540193.727222529
[2026-04-06 11:41:39] 2026-04-06 15:40:44,036 | INFO     | intersect: -1212903095.8624892
[2026-04-06 11:41:39] 2026-04-06 15:40:44,039 | INFO     | chi2: 0.8186787500093476
[2026-04-06 11:41:39] 2026-04-06 15:40:44,039 | INFO     | current chi2=0.8186787500093476 (change=1.5801440271934708 %)
[2026-04-06 11:41:39] 2026-04-06 15:40:44,039 | INFO     | left removable region: 20
[2026-04-06 11:41:39] 2026-04-06 15:40:44,041 | INFO     | sum of square deviations: 1778416630904.8755
[2026-04-06 11:41:39] 2026-04-06 15:40:44,121 | INFO     | sum of deviations: 1386005704920.3828
[2026-04-06 11:41:39] 2026-04-06 15:40:44,121 | INFO     | mean x: 1775434776.249162
[2026-04-06 11:41:39] 2026-04-06 15:40:44,121 | INFO     | mean y: 2540775.420670391
[2026-04-06 11:41:39] 2026-04-06 15:40:44,122 | INFO     | intersect: -1381141026.600784
[2026-04-06 11:41:39] 2026-04-06 15:40:44,124 | INFO     | chi2: 0.10178037166245522
[2026-04-06 11:41:39] 2026-04-06 15:40:44,124 | INFO     | current memory leak: 0.78 B/s (using 1790 data points, chi2=0.10)
[2026-04-06 11:41:39] 2026-04-06 15:40:44,126 | INFO     | could have reported an average CPU frequency of 2899 MHz (65 samples)
[2026-04-06 11:41:39] 2026-04-06 15:40:44,126 | INFO     | ..............................
[2026-04-06 11:41:39] 2026-04-06 15:40:44,126 | INFO     | . Timing measurements:
[2026-04-06 11:41:39] 2026-04-06 15:40:44,126 | INFO     | . get job = 0 s
[2026-04-06 11:41:39] 2026-04-06 15:40:44,126 | INFO     | . initial setup = 2 s
[2026-04-06 11:41:39] 2026-04-06 15:40:44,126 | INFO     | . payload setup = 13 s
[2026-04-06 11:41:39] 2026-04-06 15:40:44,126 | INFO     | . stage-in = 0 s
[2026-04-06 11:41:39] 2026-04-06 15:40:44,127 | INFO     | . payload execution = 111047 s
[2026-04-06 11:41:39] 2026-04-06 15:40:44,127 | INFO     | . stage-out = 2 s
[2026-04-06 11:41:39] 2026-04-06 15:40:44,127 | INFO     | . log creation = 0 s
[2026-04-06 11:41:39] 2026-04-06 15:40:44,127 | INFO     | ..............................
[2026-04-06 11:41:39] 2026-04-06 15:40:44,513 | INFO     | 
[2026-04-06 11:41:39] 2026-04-06 15:40:44,513 | INFO     | job summary report
[2026-04-06 11:41:39] 2026-04-06 15:40:44,513 | INFO     | --------------------------------------------------
[2026-04-06 11:41:39] 2026-04-06 15:40:44,513 | INFO     | PanDA job id: 7071839833
[2026-04-06 11:41:39] 2026-04-06 15:40:44,514 | INFO     | task id: 49179817
[2026-04-06 11:41:39] 2026-04-06 15:40:44,514 | INFO     | errors: (none)
[2026-04-06 11:41:39] 2026-04-06 15:40:44,514 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-06 11:41:39] 2026-04-06 15:40:44,514 | INFO     | pilot state: finished 
[2026-04-06 11:41:39] 2026-04-06 15:40:44,514 | INFO     | transexitcode: 0
[2026-04-06 11:41:39] 2026-04-06 15:40:44,514 | INFO     | exeerrorcode: 0
[2026-04-06 11:41:39] 2026-04-06 15:40:44,514 | INFO     | exeerrordiag: 
[2026-04-06 11:41:39] 2026-04-06 15:40:44,515 | INFO     | exitcode: 0
[2026-04-06 11:41:39] 2026-04-06 15:40:44,515 | INFO     | exitmsg: OK
[2026-04-06 11:41:39] 2026-04-06 15:40:44,515 | INFO     | cpuconsumptiontime: 179602 s
[2026-04-06 11:41:39] 2026-04-06 15:40:44,515 | INFO     | nevents: 400
[2026-04-06 11:41:39] 2026-04-06 15:40:44,515 | INFO     | neventsw: 0
[2026-04-06 11:41:39] 2026-04-06 15:40:44,515 | INFO     | pid: 1562622
[2026-04-06 11:41:39] 2026-04-06 15:40:44,515 | INFO     | pgrp: 1562622
[2026-04-06 11:41:39] 2026-04-06 15:40:44,515 | INFO     | corecount: 8
[2026-04-06 11:41:39] 2026-04-06 15:40:44,516 | INFO     | event service: False
[2026-04-06 11:41:39] 2026-04-06 15:40:44,516 | INFO     | sizes: {0: 2279815, 1: 2280276, 11: 2280276, 111065: 2355218, 111066: 2355217, 111068: 2364271, 111071: 2364455, 111073: 2364745}
[2026-04-06 11:41:39] 2026-04-06 15:40:44,516 | INFO     | --------------------------------------------------
[2026-04-06 11:41:39] 2026-04-06 15:40:44,516 | INFO     | 
[2026-04-06 11:41:39] 2026-04-06 15:40:44,516 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-06 11:41:39] 2026-04-06 15:40:44,535 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,535 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,536 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,536 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,537 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,537 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,537 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,538 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,538 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-06 11:41:39] 2026-04-06 15:40:44,538 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,538 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-06 11:41:39] 2026-04-06 15:40:44,538 | INFO     | job 7071839833 has completed (purged errors)
[2026-04-06 11:41:39] 2026-04-06 15:40:44,539 | INFO     | overall cleanup function is called
[2026-04-06 11:41:39] 2026-04-06 15:40:45,547 | INFO     | --- collectZombieJob: --- 10, [1562622]
[2026-04-06 11:41:39] 2026-04-06 15:40:45,548 | INFO     | zombie collector waiting for pid 1562622
[2026-04-06 11:41:39] 2026-04-06 15:40:45,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-06 11:41:39] 2026-04-06 15:40:45,548 | INFO     | collected zombie processes
[2026-04-06 11:41:39] 2026-04-06 15:40:45,548 | INFO     | will attempt to kill all subprocesses of pid=1562622
[2026-04-06 11:41:39] 2026-04-06 15:40:45,790 | INFO     | process IDs to be killed: [1562622] (in reverse order)
[2026-04-06 11:41:39] 2026-04-06 15:40:45,856 | WARNING  | found no corresponding commands to process id(s)
[2026-04-06 11:41:39] 2026-04-06 15:40:45,856 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-06 11:41:39] 2026-04-06 15:40:45,865 | INFO     | did not find any defunct processes belonging to 1562622
[2026-04-06 11:41:39] 2026-04-06 15:40:45,873 | INFO     | did not find any defunct processes belonging to 1562622
[2026-04-06 11:41:39] 2026-04-06 15:40:45,874 | INFO     | ready for new job
[2026-04-06 11:41:39] 2026-04-06 15:40:45,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-06 11:41:39] 2026-04-06 15:40:45,881 | INFO     | **************************************
[2026-04-06 11:41:39] 2026-04-06 15:40:45,881 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-06 11:41:39] 2026-04-06 15:40:45,882 | INFO     | **************************************
[2026-04-06 11:41:39] 2026-04-06 15:40:45,882 | INFO     | 
[2026-04-06 11:41:39] 2026-04-06 15:40:45,884 | INFO     | architecture information:
[2026-04-06 11:41:39] 2026-04-06 15:40:45,884 | INFO     | executing command: cat /etc/os-release
[2026-04-06 11:41:39] 2026-04-06 15:40:45,903 | INFO     | cat /etc/os-release:
[2026-04-06 11:41:39] NAME="CentOS Linux"
[2026-04-06 11:41:39] VERSION="7 (Core)"
[2026-04-06 11:41:39] ID="centos"
[2026-04-06 11:41:39] ID_LIKE="rhel fedora"
[2026-04-06 11:41:39] VERSION_ID="7"
[2026-04-06 11:41:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-06 11:41:39] ANSI_COLOR="0;31"
[2026-04-06 11:41:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-06 11:41:39] HOME_URL="https://www.centos.org/"
[2026-04-06 11:41:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-06 11:41:39] 
[2026-04-06 11:41:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-06 11:41:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-06 11:41:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-06 11:41:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-06 11:41:39] 
[2026-04-06 11:41:39] 2026-04-06 15:40:45,903 | INFO     | **************************************
[2026-04-06 11:41:39] 2026-04-06 15:40:46,406 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-06 11:41:39] 2026-04-06 15:40:46,422 | INFO     | sufficient remaining disk space (53716451328 B)
[2026-04-06 11:41:39] 2026-04-06 15:40:46,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-06 11:41:39] 2026-04-06 15:40:46,422 | INFO     | current server update state: UPDATING_FINAL
[2026-04-06 11:41:39] 2026-04-06 15:40:46,423 | INFO     | update_server=False
[2026-04-06 11:41:39] 2026-04-06 15:40:46,423 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-06 11:41:39] 2026-04-06 15:40:46,423 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-06 11:41:39] 2026-04-06 15:40:47,221 | INFO     | all payload control threads have been joined
[2026-04-06 11:41:39] 2026-04-06 15:40:47,230 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-06 11:41:39] 2026-04-06 15:40:47,230 | INFO     | aborting loop
[2026-04-06 11:41:39] 2026-04-06 15:40:47,422 | INFO     | all data control threads have been joined
[2026-04-06 11:41:39] 2026-04-06 15:40:47,428 | INFO     | [job] retrieve thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:47,562 | INFO     | [payload] failed_post thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:47,811 | INFO     | [payload] validate_pre thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:47,935 | INFO     | all job control threads have been joined
[2026-04-06 11:41:39] 2026-04-06 15:40:47,973 | INFO     | [payload] validate_post thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:48,184 | INFO     | [data] copytool_in thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:48,185 | INFO     | [payload] execute_payloads thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:48,226 | INFO     | [payload] control thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:48,235 | INFO     | [job] job monitor thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:48,269 | INFO     | [job] create_data_payload thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:48,269 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:48,427 | INFO     | [data] control thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:48,428 | INFO     | [data] copytool_out thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:48,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-06 11:41:39] 2026-04-06 15:40:48,808 | INFO     | [job] validate thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:48,940 | INFO     | [job] control thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:49,256 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-06 11:41:39] 2026-04-06 15:40:50,261 | INFO     | [job] queue monitor thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:50,469 | INFO     | [monitor] cgroup control has ended
[2026-04-06 11:41:39] 2026-04-06 15:40:52,485 | INFO     | [data] queue_monitor thread has finished
[2026-04-06 11:41:39] 2026-04-06 15:40:53,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140024205875008)>', '<ExcThread(monitor, started 140023844300544)>']
[2026-04-06 11:41:39] 2026-04-06 15:40:58,041 | INFO     | all workflow threads have been joined
[2026-04-06 11:41:39] 2026-04-06 15:40:58,041 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-06 11:41:39] 2026-04-06 15:40:58,042 | INFO     | traces error code: 0
[2026-04-06 11:41:39] 2026-04-06 15:40:58,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-06 11:41:39] 2026-04-06 15:41:17,049 | INFO     | PID=1553125 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-06 11:41:39] 2026-04-06 15:41:17,050 | INFO     | .. there are 6 such processes running
[2026-04-06 11:41:39] 2026-04-06 15:41:17,050 | INFO     | found 0 job(s) in 20 queues
[2026-04-06 11:41:39] 2026-04-06 15:41:17,050 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-06 11:41:39] 2026-04-06 15:41:17,050 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-06 11:41:39] 2026-04-06 15:41:17,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-06 11:41:39] 2026-04-06 15:41:17,050 | INFO     | [monitor] control thread has ended
[2026-04-06 11:41:39] 2026-04-06 15:41:17,168 [wrapper] ==== pilot stdout END ====
[2026-04-06 11:41:39] 2026-04-06 15:41:17,171 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-06 11:41:39] 2026-04-06 15:41:17,173 [wrapper] pilotpid: 1553125
[2026-04-06 11:41:39] 2026-04-06 15:41:17,175 [wrapper] Pilot exit status: 0
[2026-04-06 11:41:39] 2026-04-06 15:41:17,913 [wrapper] pandaids: 7071839833 7071839833
[2026-04-06 11:41:39] 2026-04-06 15:41:17,958 [wrapper] cleanup supervisor_pilot 4136116 1553126
[2026-04-06 11:41:39] 2026-04-06 15:41:17,961 [wrapper] Test setup, not cleaning
[2026-04-06 11:41:39] 2026-04-06 15:41:17,964 [wrapper] apfmon messages muted
[2026-04-06 11:41:39] 2026-04-06 15:41:17,966 [wrapper] ==== wrapper stdout END ====
[2026-04-06 11:41:39] 2026-04-06 15:41:17,969 [wrapper] ==== wrapper stderr END ====
[2026-04-06 11:41:39]  *** Error codes and diagnostics ***
[2026-04-06 11:41:39]     "exeErrorCode": 0,
[2026-04-06 11:41:39]     "exeErrorDiag": "",
[2026-04-06 11:41:39]     "pilotErrorCode": 0,
[2026-04-06 11:41:39]     "pilotErrorDiag": "",
[2026-04-06 11:41:39]  *** Listing of results directory ***
[2026-04-06 11:41:39] total 727996
[2026-04-06 11:41:39] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-04-06 11:41:39] -rwx------. 1 boincer umatlas     36322 Mar 27 22:41 runpilot2-wrapper.sh
[2026-04-06 11:41:39] -rw-r--r--. 1 boincer umatlas      5118 Mar 27 22:43 queuedata.json
[2026-04-06 11:41:39] -rw-r--r--. 1 boincer umatlas    585013 Mar 27 22:43 pilot3.tar.gz
[2026-04-06 11:41:39] -rw-r--r--. 1 boincer umatlas       100 Apr  5 00:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-06 11:41:39] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  5 00:26 run_atlas
[2026-04-06 11:41:39] -rw-r--r--. 1 boincer umatlas       105 Apr  5 00:26 job.xml
[2026-04-06 11:41:39] -rw-r--r--. 3 boincer umatlas 236811321 Apr  5 00:26 EVNT.49132241._000004.pool.root.1
[2026-04-06 11:41:39] -rw-r--r--. 3 boincer umatlas 236811321 Apr  5 00:26 ATLAS.root_0
[2026-04-06 11:41:39] -rw-r--r--. 2 boincer umatlas     15845 Apr  5 00:26 start_atlas.sh
[2026-04-06 11:41:39] drwxrwx--x. 2 boincer umatlas      4096 Apr  5 00:26 shared
[2026-04-06 11:41:39] -rw-r--r--. 2 boincer umatlas    597558 Apr  5 00:26 input.tar.gz
[2026-04-06 11:41:39] -rw-r--r--. 1 boincer umatlas         0 Apr  5 00:26 boinc_lockfile
[2026-04-06 11:41:39] -rw-r--r--. 1 boincer umatlas      2611 Apr  5 04:49 pandaJob.out
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas        57 Apr  5 04:49 setup.sh.local
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas   1005096 Apr  5 04:49 agis_schedconf.cvmfs.json
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas       435 Apr  5 04:49 workernode_map.json
[2026-04-06 11:41:39] -rw-r--r--. 1 boincer umatlas      6525 Apr  6 11:38 init_data.xml
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas 237963169 Apr  6 11:39 HITS.49179817._001197.pool.root.1
[2026-04-06 11:41:39] -rw-r--r--. 1 boincer umatlas       532 Apr  6 11:40 boinc_task_state.xml
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas        96 Apr  6 11:40 pilot_heartbeat.json
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas      1053 Apr  6 11:40 memory_monitor_summary.json
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas   1511579 Apr  6 11:40 agis_ddmendpoints.agis.ALL.json
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas   1629375 Apr  6 11:40 log.49179817._001197.job.log.tgz.1
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas      6395 Apr  6 11:40 heartbeat.json
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas       822 Apr  6 11:41 pilotlog.txt
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas  13342160 Apr  6 11:41 log.49179817._001197.job.log.1
[2026-04-06 11:41:39] -rw-r--r--. 1 boincer umatlas      8192 Apr  6 11:41 boinc_mmap_file
[2026-04-06 11:41:39] -rw-r--r--. 1 boincer umatlas        29 Apr  6 11:41 wrapper_checkpoint.txt
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas       357 Apr  6 11:41 output.list
[2026-04-06 11:41:39] -rw-r--r--. 1 boincer umatlas       620 Apr  6 11:41 runtime_log
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas  14991360 Apr  6 11:41 result.tar.gz
[2026-04-06 11:41:39] -rw-r--r--. 1 boincer umatlas      9428 Apr  6 11:41 runtime_log.err
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas       790 Apr  6 11:41 PkDNDminYQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmEaGKDmbJYR9m.diag
[2026-04-06 11:41:39] -rw-r--r--. 1 boincer umatlas     23489 Apr  6 11:41 stderr.txt
[2026-04-06 11:41:39] HITS file was successfully produced:
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas 237963169 Apr  6 11:39 shared/HITS.pool.root.1
[2026-04-06 11:41:39]  *** Contents of shared directory: ***
[2026-04-06 11:41:39] total 478896
[2026-04-06 11:41:39] -rw-r--r--. 3 boincer umatlas 236811321 Apr  5 00:26 ATLAS.root_0
[2026-04-06 11:41:39] -rw-r--r--. 2 boincer umatlas     15845 Apr  5 00:26 start_atlas.sh
[2026-04-06 11:41:39] -rw-r--r--. 2 boincer umatlas    597558 Apr  5 00:26 input.tar.gz
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas 237963169 Apr  6 11:39 HITS.pool.root.1
[2026-04-06 11:41:39] -rw-------. 1 boincer umatlas  14991360 Apr  6 11:41 result.tar.gz
11:41:40 (1547401): run_atlas exited; CPU time 183874.539834
11:41:40 (1547401): called boinc_finish(0)

</stderr_txt>
]]>

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