Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
18:18:13 (2415955): wrapper (7.7.26015): starting
18:18:13 (2415955): wrapper: running run_atlas (--nthreads 4)
[2026-04-04 18:18:13] Arguments: --nthreads 4
[2026-04-04 18:18:13] Threads: 4
[2026-04-04 18:18:13] Checking for CVMFS
[2026-04-04 18:18:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-04 18:18:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-04 18:18:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-04 18:18:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-04 18:18:13] 2.13.3.0 2383102 78 46632 158092 1 19 3298986 4096000 1006 130560 0 74131 99.961 7340 1733 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-04-04 18:18:13] CVMFS is ok
[2026-04-04 18:18:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-04 18:18:13] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-04 18:18:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-04 18:18:13] Further information can be found at the LHC@home message board.
[2026-04-04 18:18:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-04 18:18:13] Checking for apptainer binary...
[2026-04-04 18:18:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-04 18:18:13] Running /usr/bin/apptainer --version
[2026-04-04 18:18:13] apptainer version 1.4.5
[2026-04-04 18:18:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-04 18:18:13] ASRock-B760M
[2026-04-04 18:18:13] apptainer works
[2026-04-04 18:18:13] Set ATHENA_PROC_NUMBER=4
[2026-04-04 18:18:13] Set ATHENA_CORE_NUMBER=4
[2026-04-04 18:18:13] Starting ATLAS job with PandaID=7065656773
[2026-04-04 18:18:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 19:57:44]  *** The last 200 lines of the pilot log: ***
[2026-04-04 19:57:44]  is_altstaged=None
[2026-04-04 19:57:44]  is_tar=False
[2026-04-04 19:57:44]  lfn=log.48997948._003470.job.log.tgz.1
[2026-04-04 19:57:44]  mtime=0
[2026-04-04 19:57:44]  protocol_id=None
[2026-04-04 19:57:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-04 19:57:44]  replicas=None
[2026-04-04 19:57:44]  scope=mc23_13p6TeV
[2026-04-04 19:57:44]  status=None
[2026-04-04 19:57:44]  status_code=0
[2026-04-04 19:57:44]  storage_token=
[2026-04-04 19:57:44]  surl=/home/whitlerd/Desktop/BOINC/slots/8/PanDA_Pilot-7065656773/log.48997948._003470.job.log.tgz.1
[2026-04-04 19:57:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/2b/log.48997948._003470.job.log.tgz.1
[2026-04-04 19:57:44]  workdir=None
[2026-04-04 19:57:44] ]
[2026-04-04 19:57:44] 2026-04-04 23:57:07,344 | INFO     | transferring file log.48997948._003470.job.log.tgz.1 from /home/whitlerd/Desktop/BOINC/slots/8/PanDA_Pilot-7065656773/log.48997948._003470.job.log.tgz.1 to /home/w
[2026-04-04 19:57:44] 2026-04-04 23:57:07,344 | INFO     | executing command: /usr/bin/env mv /home/whitlerd/Desktop/BOINC/slots/8/PanDA_Pilot-7065656773/log.48997948._003470.job.log.tgz.1 /home/whitlerd/Desktop/BOINC/slot
[2026-04-04 19:57:44] 2026-04-04 23:57:07,355 | INFO     | adding to output.list: log.48997948._003470.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/2b/log.48997948._003470.job.log.tg
[2026-04-04 19:57:44] 2026-04-04 23:57:07,356 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-04 19:57:44] 2026-04-04 23:57:07,356 | INFO     | summary of transferred files:
[2026-04-04 19:57:44] 2026-04-04 23:57:07,356 | INFO     |  -- lfn=log.48997948._003470.job.log.tgz.1, status_code=0, status=transferred
[2026-04-04 19:57:44] 2026-04-04 23:57:07,356 | INFO     | stage-out finished correctly
[2026-04-04 19:57:44] 2026-04-04 23:57:08,686 | INFO     | time since job start (5927s) is within the limit (345600.0s)
[2026-04-04 19:57:44] 2026-04-04 23:57:09,634 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-04 19:57:44] 2026-04-04 23:57:10,690 | INFO     | time since job start (5929s) is within the limit (345600.0s)
[2026-04-04 19:57:44] 2026-04-04 23:57:11,220 | INFO     | job 7065656773 has state=finished
[2026-04-04 19:57:44] 2026-04-04 23:57:11,220 | INFO     | preparing for final server update for job 7065656773 in state='finished'
[2026-04-04 19:57:44] 2026-04-04 23:57:11,220 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/8/PanDA_Pilot-7065656773/jobReport.json
[2026-04-04 19:57:44] 2026-04-04 23:57:11,221 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/8/workernode_map.json
[2026-04-04 19:57:44] 2026-04-04 23:57:11,222 | INFO     | this job has now completed (state=finished)
[2026-04-04 19:57:44] 2026-04-04 23:57:11,222 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-04 19:57:44] 2026-04-04 23:57:11,222 | INFO     | log transfer has been attempted: DONE
[2026-04-04 19:57:44] 2026-04-04 23:57:11,222 | INFO     | job 7065656773 has finished - writing final server update
[2026-04-04 19:57:44] 2026-04-04 23:57:11,222 | INFO     | total number of processed events: 400 (read)
[2026-04-04 19:57:44] 2026-04-04 23:57:11,224 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/8/PanDA_Pilot-7065656773/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 19:57:44] 2026-04-04 23:57:11,225 | INFO     | extracted standard info from prmon json
[2026-04-04 19:57:44] 2026-04-04 23:57:11,225 | INFO     | extracted standard memory fields from prmon json
[2026-04-04 19:57:44] 2026-04-04 23:57:11,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-04 19:57:44] 2026-04-04 23:57:11,225 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-04 19:57:44] 2026-04-04 23:57:11,225 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-04 19:57:44] 2026-04-04 23:57:11,226 | INFO     | fitting pss+swap vs Time
[2026-04-04 19:57:44] 2026-04-04 23:57:11,226 | INFO     | sum of square deviations: 226022842.5
[2026-04-04 19:57:44] 2026-04-04 23:57:11,226 | INFO     | sum of deviations: -9467359575.999998
[2026-04-04 19:57:44] 2026-04-04 23:57:11,226 | INFO     | mean x: 1775344137.5
[2026-04-04 19:57:44] 2026-04-04 23:57:11,226 | INFO     | mean y: 2431042.466666667
[2026-04-04 19:57:44] 2026-04-04 23:57:11,226 | INFO     | intersect: 74365805712.68869
[2026-04-04 19:57:44] 2026-04-04 23:57:11,226 | INFO     | chi2: 0.01907225652601571
[2026-04-04 19:57:44] 2026-04-04 23:57:11,226 | INFO     | current memory leak: -41.89 B/s (using 90 data points, chi2=0.02)
[2026-04-04 19:57:44] 2026-04-04 23:57:11,227 | INFO     | could have reported an average CPU frequency of 2957 MHz (7 samples)
[2026-04-04 19:57:44] 2026-04-04 23:57:11,227 | INFO     | ..............................
[2026-04-04 19:57:44] 2026-04-04 23:57:11,227 | INFO     | . Timing measurements:
[2026-04-04 19:57:44] 2026-04-04 23:57:11,227 | INFO     | . get job = 0 s
[2026-04-04 19:57:44] 2026-04-04 23:57:11,227 | INFO     | . initial setup = 4 s
[2026-04-04 19:57:44] 2026-04-04 23:57:11,227 | INFO     | . payload setup = 3 s
[2026-04-04 19:57:44] 2026-04-04 23:57:11,227 | INFO     | . stage-in = 0 s
[2026-04-04 19:57:44] 2026-04-04 23:57:11,227 | INFO     | . payload execution = 5907 s
[2026-04-04 19:57:44] 2026-04-04 23:57:11,227 | INFO     | . stage-out = 0 s
[2026-04-04 19:57:44] 2026-04-04 23:57:11,227 | INFO     | . log creation = 0 s
[2026-04-04 19:57:44] 2026-04-04 23:57:11,227 | INFO     | ..............................
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | 
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | job summary report
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | --------------------------------------------------
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | PanDA job id: 7065656773
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | task id: 48997948
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | errors: (none)
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | pilot state: finished 
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | transexitcode: 0
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | exeerrorcode: 0
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | exeerrordiag: 
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | exitcode: 0
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | exitmsg: OK
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | cpuconsumptiontime: 22828 s
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | nevents: 400
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | neventsw: 0
[2026-04-04 19:57:44] 2026-04-04 23:57:11,653 | INFO     | pid: 2431389
[2026-04-04 19:57:44] 2026-04-04 23:57:11,654 | INFO     | pgrp: 2431389
[2026-04-04 19:57:44] 2026-04-04 23:57:11,654 | INFO     | corecount: 4
[2026-04-04 19:57:44] 2026-04-04 23:57:11,654 | INFO     | event service: False
[2026-04-04 19:57:44] 2026-04-04 23:57:11,654 | INFO     | sizes: {0: 2280213, 11: 2280213, 5914: 2316072, 5917: 2316072, 5918: 2316266}
[2026-04-04 19:57:44] 2026-04-04 23:57:11,654 | INFO     | --------------------------------------------------
[2026-04-04 19:57:44] 2026-04-04 23:57:11,654 | INFO     | 
[2026-04-04 19:57:44] 2026-04-04 23:57:11,654 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/8
[2026-04-04 19:57:44] 2026-04-04 23:57:11,668 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,668 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,668 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,668 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,668 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,668 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,668 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,668 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,668 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,668 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,668 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,668 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,668 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,669 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,669 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,669 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 19:57:44] 2026-04-04 23:57:11,669 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,669 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 19:57:44] 2026-04-04 23:57:11,669 | INFO     | job 7065656773 has completed (purged errors)
[2026-04-04 19:57:44] 2026-04-04 23:57:11,669 | INFO     | overall cleanup function is called
[2026-04-04 19:57:44] 2026-04-04 23:57:12,675 | INFO     | --- collectZombieJob: --- 10, [2431389]
[2026-04-04 19:57:44] 2026-04-04 23:57:12,675 | INFO     | zombie collector waiting for pid 2431389
[2026-04-04 19:57:44] 2026-04-04 23:57:12,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 19:57:44] 2026-04-04 23:57:12,676 | INFO     | collected zombie processes
[2026-04-04 19:57:44] 2026-04-04 23:57:12,676 | INFO     | will attempt to kill all subprocesses of pid=2431389
[2026-04-04 19:57:44] 2026-04-04 23:57:12,761 | INFO     | process IDs to be killed: [2431389] (in reverse order)
[2026-04-04 19:57:44] 2026-04-04 23:57:12,793 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 19:57:44] 2026-04-04 23:57:12,793 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 19:57:44] 2026-04-04 23:57:12,797 | INFO     | did not find any defunct processes belonging to 2431389
[2026-04-04 19:57:44] 2026-04-04 23:57:12,799 | INFO     | did not find any defunct processes belonging to 2431389
[2026-04-04 19:57:44] 2026-04-04 23:57:12,799 | INFO     | ready for new job
[2026-04-04 19:57:44] 2026-04-04 23:57:12,799 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-04 19:57:44] 2026-04-04 23:57:12,800 | INFO     | **************************************
[2026-04-04 19:57:44] 2026-04-04 23:57:12,801 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-04 19:57:44] 2026-04-04 23:57:12,801 | INFO     | **************************************
[2026-04-04 19:57:44] 2026-04-04 23:57:12,801 | INFO     | 
[2026-04-04 19:57:44] 2026-04-04 23:57:12,802 | INFO     | architecture information:
[2026-04-04 19:57:44] 2026-04-04 23:57:12,802 | INFO     | executing command: cat /etc/os-release
[2026-04-04 19:57:44] 2026-04-04 23:57:12,811 | INFO     | cat /etc/os-release:
[2026-04-04 19:57:44] NAME="CentOS Linux"
[2026-04-04 19:57:44] VERSION="7 (Core)"
[2026-04-04 19:57:44] ID="centos"
[2026-04-04 19:57:44] ID_LIKE="rhel fedora"
[2026-04-04 19:57:44] VERSION_ID="7"
[2026-04-04 19:57:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 19:57:44] ANSI_COLOR="0;31"
[2026-04-04 19:57:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 19:57:44] HOME_URL="https://www.centos.org/"
[2026-04-04 19:57:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 19:57:44] 
[2026-04-04 19:57:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 19:57:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 19:57:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 19:57:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 19:57:44] 
[2026-04-04 19:57:44] 2026-04-04 23:57:12,812 | INFO     | **************************************
[2026-04-04 19:57:44] 2026-04-04 23:57:13,314 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/8
[2026-04-04 19:57:44] 2026-04-04 23:57:13,325 | INFO     | sufficient remaining disk space (416383238144 B)
[2026-04-04 19:57:44] 2026-04-04 23:57:13,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 19:57:44] 2026-04-04 23:57:13,325 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 19:57:44] 2026-04-04 23:57:13,325 | INFO     | update_server=False
[2026-04-04 19:57:44] 2026-04-04 23:57:13,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-04 19:57:44] 2026-04-04 23:57:13,326 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 19:57:44] 2026-04-04 23:57:13,498 | WARNING  | process 2431389 can no longer be monitored (due to stat problems) - aborting
[2026-04-04 19:57:44] 2026-04-04 23:57:13,557 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/8/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 19:57:44] 2026-04-04 23:57:13,641 | INFO     | number of running child processes to parent process 2431389: 1
[2026-04-04 19:57:44] 2026-04-04 23:57:13,641 | INFO     | maximum number of monitored processes: 6
[2026-04-04 19:57:44] 2026-04-04 23:57:13,641 | INFO     | aborting job monitoring since job object (job id=7065656773) has expired
[2026-04-04 19:57:44] 2026-04-04 23:57:13,641 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 19:57:44] 2026-04-04 23:57:13,641 | INFO     | will abort loop
[2026-04-04 19:57:44] 2026-04-04 23:57:13,911 | INFO     | all data control threads have been joined
[2026-04-04 19:57:44] 2026-04-04 23:57:14,176 | INFO     | all payload control threads have been joined
[2026-04-04 19:57:44] 2026-04-04 23:57:14,331 | INFO     | [job] retrieve thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:14,349 | INFO     | [payload] validate_post thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:14,415 | INFO     | [data] copytool_in thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:14,646 | INFO     | [job] job monitor thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:14,693 | INFO     | [payload] failed_post thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:14,784 | INFO     | all job control threads have been joined
[2026-04-04 19:57:44] 2026-04-04 23:57:14,916 | INFO     | [data] control thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:15,181 | INFO     | [payload] control thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:15,331 | INFO     | [data] copytool_out thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:15,421 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:15,652 | INFO     | [job] validate thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:15,674 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 19:57:44] 2026-04-04 23:57:15,687 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:15,790 | INFO     | [job] control thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:15,795 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:16,271 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 19:57:44] 2026-04-04 23:57:17,276 | INFO     | [job] queue monitor thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:19,680 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:23,402 | INFO     | job.realtimelogging is not enabled
[2026-04-04 19:57:44] 2026-04-04 23:57:24,404 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 19:57:44] 2026-04-04 23:57:30,149 | INFO     | [monitor] cgroup control has ended
[2026-04-04 19:57:44] 2026-04-04 23:57:31,443 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132840371824448)>', '<ExcThread(monitor, started 132840016557824)>']
[2026-04-04 19:57:44] 2026-04-04 23:57:36,468 | INFO     | all workflow threads have been joined
[2026-04-04 19:57:44] 2026-04-04 23:57:36,468 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 19:57:44] 2026-04-04 23:57:36,468 | INFO     | traces error code: 0
[2026-04-04 19:57:44] 2026-04-04 23:57:36,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 19:57:44] 2026-04-04 23:57:43,860 | INFO     | PID=2419819 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-04 19:57:44] 2026-04-04 23:57:43,861 | INFO     | .. there are 3 such processes running
[2026-04-04 19:57:44] 2026-04-04 23:57:43,861 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 19:57:44] 2026-04-04 23:57:43,861 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 19:57:44] 2026-04-04 23:57:43,861 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 19:57:44] 2026-04-04 23:57:43,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 19:57:44] 2026-04-04 23:57:43,861 | INFO     | [monitor] control thread has ended
[2026-04-04 19:57:44] 2026-04-04 23:57:43,933 [wrapper] ==== pilot stdout END ====
[2026-04-04 19:57:44] 2026-04-04 23:57:43,935 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 19:57:44] 2026-04-04 23:57:43,937 [wrapper] pilotpid: 2419819
[2026-04-04 19:57:44] 2026-04-04 23:57:43,939 [wrapper] Pilot exit status: 0
[2026-04-04 19:57:44] 2026-04-04 23:57:43,944 [wrapper] pandaids: 7065656773
[2026-04-04 19:57:44] 2026-04-04 23:57:43,964 [wrapper] cleanup supervisor_pilot 2479275 2419820
[2026-04-04 19:57:44] 2026-04-04 23:57:43,965 [wrapper] Test setup, not cleaning
[2026-04-04 19:57:44] 2026-04-04 23:57:43,968 [wrapper] apfmon messages muted
[2026-04-04 19:57:44] 2026-04-04 23:57:43,969 [wrapper] ==== wrapper stdout END ====
[2026-04-04 19:57:44] 2026-04-04 23:57:43,971 [wrapper] ==== wrapper stderr END ====
[2026-04-04 19:57:44]  *** Error codes and diagnostics ***
[2026-04-04 19:57:44]     "exeErrorCode": 0,
[2026-04-04 19:57:44]     "exeErrorDiag": "",
[2026-04-04 19:57:44]     "pilotErrorCode": 0,
[2026-04-04 19:57:44]     "pilotErrorDiag": "",
[2026-04-04 19:57:44]  *** Listing of results directory ***
[2026-04-04 19:57:44] total 553680
[2026-04-04 19:57:44] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 28 11:51 pilot3.tar.gz
[2026-04-04 19:57:44] -rwx------ 1 whitlerd whitlerd     36322 Mar 28 11:55 runpilot2-wrapper.sh
[2026-04-04 19:57:44] -rw-r--r-- 1 whitlerd whitlerd      5118 Mar 28 11:56 queuedata.json
[2026-04-04 19:57:44] -rw-rw-r-- 1 whitlerd whitlerd       100 Apr  4 18:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 19:57:44] -rwxr-xr-x 1 whitlerd whitlerd      7986 Apr  4 18:18 run_atlas
[2026-04-04 19:57:44] -rw-rw-r-- 1 whitlerd whitlerd       105 Apr  4 18:18 job.xml
[2026-04-04 19:57:44] -rw-r--r-- 2 whitlerd whitlerd 324130046 Apr  4 18:18 EVNT.48997945._000112.pool.root.1
[2026-04-04 19:57:44] -rw-r--r-- 2 whitlerd whitlerd    597545 Apr  4 18:18 input.tar.gz
[2026-04-04 19:57:44] -rw-r--r-- 2 whitlerd whitlerd     15845 Apr  4 18:18 start_atlas.sh
[2026-04-04 19:57:44] drwxrwx--x 2 whitlerd whitlerd      4096 Apr  4 18:18 shared
[2026-04-04 19:57:44] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr  4 18:18 boinc_setup_complete
[2026-04-04 19:57:44] -rw-rw-r-- 1 whitlerd whitlerd      9163 Apr  4 18:18 init_data.xml
[2026-04-04 19:57:44] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr  4 18:18 boinc_lockfile
[2026-04-04 19:57:44] -rw-rw-r-- 1 whitlerd whitlerd      2572 Apr  4 18:18 pandaJob.out
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd   1005080 Apr  4 18:18 agis_schedconf.cvmfs.json
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd   1511579 Apr  4 18:18 agis_ddmendpoints.agis.ALL.json
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd       420 Apr  4 18:18 workernode_map.json
[2026-04-04 19:57:44] drwx------ 5 whitlerd whitlerd      4096 Apr  4 18:18 pilot3
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd 236543058 Apr  4 19:56 HITS.48997948._003470.pool.root.1
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd        95 Apr  4 19:57 pilot_heartbeat.json
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd      1020 Apr  4 19:57 memory_monitor_summary.json
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd    290167 Apr  4 19:57 log.48997948._003470.job.log.tgz.1
[2026-04-04 19:57:44] -rw-rw-r-- 1 whitlerd whitlerd       529 Apr  4 19:57 boinc_task_state.xml
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd      6294 Apr  4 19:57 heartbeat.json
[2026-04-04 19:57:44] -rw-rw-r-- 1 whitlerd whitlerd      8192 Apr  4 19:57 boinc_mmap_file
[2026-04-04 19:57:44] -rw-rw-r-- 1 whitlerd whitlerd        27 Apr  4 19:57 wrapper_checkpoint.txt
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd       822 Apr  4 19:57 pilotlog.txt
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd    885773 Apr  4 19:57 log.48997948._003470.job.log.1
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd       357 Apr  4 19:57 output.list
[2026-04-04 19:57:44] -rw-rw-r-- 1 whitlerd whitlerd       620 Apr  4 19:57 runtime_log
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd   1198080 Apr  4 19:57 result.tar.gz
[2026-04-04 19:57:44] -rw-rw-r-- 1 whitlerd whitlerd      9019 Apr  4 19:57 runtime_log.err
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd       648 Apr  4 19:57 Kn8NDmVBlQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmWRIKDmPCPlDo.diag
[2026-04-04 19:57:44] -rw-rw-r-- 1 whitlerd whitlerd     21606 Apr  4 19:57 stderr.txt
[2026-04-04 19:57:44] HITS file was successfully produced:
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd 236543058 Apr  4 19:56 shared/HITS.pool.root.1
[2026-04-04 19:57:44]  *** Contents of shared directory: ***
[2026-04-04 19:57:44] total 549316
[2026-04-04 19:57:44] -rw-r--r-- 2 whitlerd whitlerd 324130046 Apr  4 18:18 ATLAS.root_0
[2026-04-04 19:57:44] -rw-r--r-- 2 whitlerd whitlerd    597545 Apr  4 18:18 input.tar.gz
[2026-04-04 19:57:44] -rw-r--r-- 2 whitlerd whitlerd     15845 Apr  4 18:18 start_atlas.sh
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd 236543058 Apr  4 19:56 HITS.pool.root.1
[2026-04-04 19:57:44] -rw------- 1 whitlerd whitlerd   1198080 Apr  4 19:57 result.tar.gz
19:57:45 (2415955): run_atlas exited; CPU time 22894.925378
19:57:45 (2415955): called boinc_finish(0)

</stderr_txt>
]]>

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