Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:12:05 (32537): wrapper (7.7.26015): starting
18:12:05 (32537): wrapper: running run_atlas (--nthreads 12)
[2026-04-04 18:12:05] Arguments: --nthreads 12
[2026-04-04 18:12:05] Threads: 12
[2026-04-04 18:12:05] Checking for CVMFS
[2026-04-04 18:12:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-04 18:12:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-04 18:12:06] Running cvmfs_config stat atlas.cern.ch
[2026-04-04 18:12:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-04 18:12:06] 2.11.2.0 2984 473979 91716 158091 0 1 16655743 20275201 1 130560 1 201048036 99.958 26153541 16855 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-04 18:12:06] CVMFS is ok
[2026-04-04 18:12:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-04 18:12:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-04 18:12:06] Further information can be found at the LHC@home message board.
[2026-04-04 18:12:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-04 18:12:06] Checking for apptainer binary...
[2026-04-04 18:12:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-04 18:12:06] Running /usr/bin/apptainer --version
[2026-04-04 18:12:07] apptainer version 1.3.2-1.el7
[2026-04-04 18:12:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-04 18:12:08] c-205-26.aglt2.org
[2026-04-04 18:12:08] apptainer works
[2026-04-04 18:12:08] Set ATHENA_PROC_NUMBER=12
[2026-04-04 18:12:08] Set ATHENA_CORE_NUMBER=12
[2026-04-04 18:12:08] Starting ATLAS job with PandaID=7074299799
[2026-04-04 18:12:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 19:28:44]  *** The last 200 lines of the pilot log: ***
[2026-04-04 19:28:44]  filesize=360740
[2026-04-04 19:28:44]  filetype=log
[2026-04-04 19:28:44]  guid=9fa383d3-caf9-4b4d-b8e0-35a1198d62bf
[2026-04-04 19:28:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-04 19:28:44]  is_altstaged=None
[2026-04-04 19:28:44]  is_tar=False
[2026-04-04 19:28:44]  lfn=log.49499687._000062.job.log.tgz.1
[2026-04-04 19:28:44]  mtime=0
[2026-04-04 19:28:44]  protocol_id=None
[2026-04-04 19:28:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-04 19:28:44]  replicas=None
[2026-04-04 19:28:44]  scope=mc23_13p6TeV
[2026-04-04 19:28:44]  status=None
[2026-04-04 19:28:44]  status_code=0
[2026-04-04 19:28:44]  storage_token=
[2026-04-04 19:28:44]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7074299799/log.49499687._000062.job.log.tgz.1
[2026-04-04 19:28:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c7/f9/log.49499687._000062.job.log.tgz.1
[2026-04-04 19:28:44]  workdir=None
[2026-04-04 19:28:44] ]
[2026-04-04 19:28:44] 2026-04-04 23:27:38,587 | INFO     | transferring file log.49499687._000062.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7074299799/log.49499687._000062.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-04-04 19:28:44] 2026-04-04 23:27:38,587 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7074299799/log.49499687._000062.job.log.tgz.1 /tmp/boinchome/slots/0/log.49499687._000062.job
[2026-04-04 19:28:44] 2026-04-04 23:27:38,608 | INFO     | adding to output.list: log.49499687._000062.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c7/f9/log.49499687._000062.job.log.tg
[2026-04-04 19:28:44] 2026-04-04 23:27:38,609 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-04 19:28:44] 2026-04-04 23:27:38,609 | INFO     | summary of transferred files:
[2026-04-04 19:28:44] 2026-04-04 23:27:38,609 | INFO     |  -- lfn=log.49499687._000062.job.log.tgz.1, status_code=0, status=transferred
[2026-04-04 19:28:44] 2026-04-04 23:27:38,610 | INFO     | stage-out finished correctly
[2026-04-04 19:28:44] 2026-04-04 23:27:39,198 | INFO     | monitor loop #345: job 0:7074299799 is in state 'finished'
[2026-04-04 19:28:44] 2026-04-04 23:27:39,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-04 19:28:44] 2026-04-04 23:27:39,385 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-04 19:28:44] 2026-04-04 23:27:41,701 | INFO     | monitor loop #346: job 0:7074299799 is in state 'finished'
[2026-04-04 19:28:44] 2026-04-04 23:27:41,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-04 19:28:44] 2026-04-04 23:27:42,128 | INFO     | job 7074299799 has state=finished
[2026-04-04 19:28:44] 2026-04-04 23:27:42,129 | INFO     | preparing for final server update for job 7074299799 in state='finished'
[2026-04-04 19:28:44] 2026-04-04 23:27:42,129 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7074299799/jobReport.json
[2026-04-04 19:28:44] 2026-04-04 23:27:42,132 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-04 19:28:44] 2026-04-04 23:27:42,132 | INFO     | this job has now completed (state=finished)
[2026-04-04 19:28:44] 2026-04-04 23:27:42,132 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-04 19:28:44] 2026-04-04 23:27:42,133 | INFO     | log transfer has been attempted: DONE
[2026-04-04 19:28:44] 2026-04-04 23:27:42,133 | INFO     | job 7074299799 has finished - writing final server update
[2026-04-04 19:28:44] 2026-04-04 23:27:42,133 | INFO     | total number of processed events: 400 (read)
[2026-04-04 19:28:44] 2026-04-04 23:27:42,135 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7074299799/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 19:28:44] 2026-04-04 23:27:42,136 | INFO     | extracted standard info from prmon json
[2026-04-04 19:28:44] 2026-04-04 23:27:42,136 | INFO     | extracted standard memory fields from prmon json
[2026-04-04 19:28:44] 2026-04-04 23:27:42,136 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-04 19:28:44] 2026-04-04 23:27:42,136 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-04 19:28:44] 2026-04-04 23:27:42,138 | INFO     | fitting pss+swap vs Time
[2026-04-04 19:28:44] 2026-04-04 23:27:42,138 | INFO     | sum of square deviations: 93240818.0
[2026-04-04 19:28:44] 2026-04-04 23:27:42,138 | INFO     | sum of deviations: 71253001.99999946
[2026-04-04 19:28:44] 2026-04-04 23:27:42,138 | INFO     | mean x (centered): 0.0
[2026-04-04 19:28:44] 2026-04-04 23:27:42,138 | INFO     | mean y: 2738499.3582089553
[2026-04-04 19:28:44] 2026-04-04 23:27:42,139 | INFO     | intersect: 2738499.3582089553
[2026-04-04 19:28:44] 2026-04-04 23:27:42,139 | INFO     | chi2: 0.005888663145750354
[2026-04-04 19:28:44] 2026-04-04 23:27:42,139 | INFO     | current memory leak: 0.76 B/s (using 67 data points, chi2=0.01)
[2026-04-04 19:28:44] 2026-04-04 23:27:42,139 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-04-04 19:28:44] 2026-04-04 23:27:42,139 | INFO     | ..............................
[2026-04-04 19:28:44] 2026-04-04 23:27:42,139 | INFO     | . Timing measurements:
[2026-04-04 19:28:44] 2026-04-04 23:27:42,140 | INFO     | . get job = 0 s
[2026-04-04 19:28:44] 2026-04-04 23:27:42,140 | INFO     | . initial setup = 7 s
[2026-04-04 19:28:44] 2026-04-04 23:27:42,140 | INFO     | . payload setup = 14 s
[2026-04-04 19:28:44] 2026-04-04 23:27:42,140 | INFO     | . stage-in = 0 s
[2026-04-04 19:28:44] 2026-04-04 23:27:42,140 | INFO     | . payload execution = 4477 s
[2026-04-04 19:28:44] 2026-04-04 23:27:42,140 | INFO     | . stage-out = 0 s
[2026-04-04 19:28:44] 2026-04-04 23:27:42,140 | INFO     | . log creation = 0 s
[2026-04-04 19:28:44] 2026-04-04 23:27:42,140 | INFO     | ..............................
[2026-04-04 19:28:44] 2026-04-04 23:27:42,217 | INFO     | 
[2026-04-04 19:28:44] 2026-04-04 23:27:42,217 | INFO     | job summary report
[2026-04-04 19:28:44] 2026-04-04 23:27:42,218 | INFO     | --------------------------------------------------
[2026-04-04 19:28:44] 2026-04-04 23:27:42,218 | INFO     | PanDA job id: 7074299799
[2026-04-04 19:28:44] 2026-04-04 23:27:42,218 | INFO     | task id: 49499687
[2026-04-04 19:28:44] 2026-04-04 23:27:42,218 | INFO     | errors: (none)
[2026-04-04 19:28:44] 2026-04-04 23:27:42,218 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 19:28:44] 2026-04-04 23:27:42,218 | INFO     | pilot state: finished 
[2026-04-04 19:28:44] 2026-04-04 23:27:42,219 | INFO     | transexitcode: 0
[2026-04-04 19:28:44] 2026-04-04 23:27:42,219 | INFO     | exeerrorcode: 0
[2026-04-04 19:28:44] 2026-04-04 23:27:42,219 | INFO     | exeerrordiag: 
[2026-04-04 19:28:44] 2026-04-04 23:27:42,219 | INFO     | exitcode: 0
[2026-04-04 19:28:44] 2026-04-04 23:27:42,219 | INFO     | exitmsg: OK
[2026-04-04 19:28:44] 2026-04-04 23:27:42,219 | INFO     | cpuconsumptiontime: 48861 s
[2026-04-04 19:28:44] 2026-04-04 23:27:42,220 | INFO     | nevents: 400
[2026-04-04 19:28:44] 2026-04-04 23:27:42,220 | INFO     | neventsw: 0
[2026-04-04 19:28:44] 2026-04-04 23:27:42,220 | INFO     | pid: 8703
[2026-04-04 19:28:44] 2026-04-04 23:27:42,220 | INFO     | pgrp: 8703
[2026-04-04 19:28:44] 2026-04-04 23:27:42,220 | INFO     | corecount: 12
[2026-04-04 19:28:44] 2026-04-04 23:27:42,220 | INFO     | event service: False
[2026-04-04 19:28:44] 2026-04-04 23:27:42,221 | INFO     | sizes: {0: 2280024, 1: 2281626, 11: 2281626, 4495: 2307802, 4496: 2316800, 4497: 2316856, 4499: 2317178}
[2026-04-04 19:28:44] 2026-04-04 23:27:42,221 | INFO     | --------------------------------------------------
[2026-04-04 19:28:44] 2026-04-04 23:27:42,221 | INFO     | 
[2026-04-04 19:28:44] 2026-04-04 23:27:42,221 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-04 19:28:44] 2026-04-04 23:27:42,247 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,247 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,247 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,247 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,248 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,248 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,248 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,250 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,250 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 19:28:44] 2026-04-04 23:27:42,250 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,250 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 19:28:44] 2026-04-04 23:27:42,250 | INFO     | job 7074299799 has completed (purged errors)
[2026-04-04 19:28:44] 2026-04-04 23:27:42,251 | INFO     | overall cleanup function is called
[2026-04-04 19:28:44] 2026-04-04 23:27:43,259 | INFO     | --- collectZombieJob: --- 10, [8703]
[2026-04-04 19:28:44] 2026-04-04 23:27:43,259 | INFO     | zombie collector waiting for pid 8703
[2026-04-04 19:28:44] 2026-04-04 23:27:43,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 19:28:44] 2026-04-04 23:27:43,260 | INFO     | collected zombie processes
[2026-04-04 19:28:44] 2026-04-04 23:27:43,260 | INFO     | will attempt to kill all subprocesses of pid=8703
[2026-04-04 19:28:44] 2026-04-04 23:27:43,347 | INFO     | process IDs to be killed: [8703] (in reverse order)
[2026-04-04 19:28:44] 2026-04-04 23:27:43,404 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 19:28:44] 2026-04-04 23:27:43,404 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 19:28:44] 2026-04-04 23:27:43,407 | INFO     | did not find any defunct processes belonging to 8703
[2026-04-04 19:28:44] 2026-04-04 23:27:43,409 | INFO     | did not find any defunct processes belonging to 8703
[2026-04-04 19:28:44] 2026-04-04 23:27:43,409 | INFO     | Ready for new job
[2026-04-04 19:28:44] 2026-04-04 23:27:43,410 | INFO     | **************************************
[2026-04-04 19:28:44] 2026-04-04 23:27:43,410 | INFO     | ***  PanDA Pilot version 3.12.2.2  ***
[2026-04-04 19:28:44] 2026-04-04 23:27:43,411 | INFO     | **************************************
[2026-04-04 19:28:44] 2026-04-04 23:27:43,411 | INFO     | 
[2026-04-04 19:28:44] 2026-04-04 23:27:43,411 | INFO     | architecture information:
[2026-04-04 19:28:44] 2026-04-04 23:27:43,412 | INFO     | executing command: cat /etc/os-release
[2026-04-04 19:28:44] 2026-04-04 23:27:43,427 | INFO     | cat /etc/os-release:
[2026-04-04 19:28:44] NAME="CentOS Linux"
[2026-04-04 19:28:44] VERSION="7 (Core)"
[2026-04-04 19:28:44] ID="centos"
[2026-04-04 19:28:44] ID_LIKE="rhel fedora"
[2026-04-04 19:28:44] VERSION_ID="7"
[2026-04-04 19:28:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 19:28:44] ANSI_COLOR="0;31"
[2026-04-04 19:28:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 19:28:44] HOME_URL="https://www.centos.org/"
[2026-04-04 19:28:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 19:28:44] 
[2026-04-04 19:28:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 19:28:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 19:28:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 19:28:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 19:28:44] 
[2026-04-04 19:28:44] 2026-04-04 23:27:43,428 | INFO     | **************************************
[2026-04-04 19:28:44] 2026-04-04 23:27:43,931 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-04 19:28:44] 2026-04-04 23:27:43,948 | INFO     | sufficient remaining disk space (29243736064 B)
[2026-04-04 19:28:44] 2026-04-04 23:27:43,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 19:28:44] 2026-04-04 23:27:43,948 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 19:28:44] 2026-04-04 23:27:43,949 | INFO     | update_server=False
[2026-04-04 19:28:44] 2026-04-04 23:27:43,949 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-04 19:28:44] 2026-04-04 23:27:43,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 19:28:44] 2026-04-04 23:27:43,974 | INFO     | all data control threads have been joined
[2026-04-04 19:28:44] 2026-04-04 23:27:44,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 19:28:44] 2026-04-04 23:27:44,215 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-04 19:28:44] 2026-04-04 23:27:44,215 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-04 19:28:44] 2026-04-04 23:27:44,215 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 19:28:44] 2026-04-04 23:27:44,215 | INFO     | will abort loop
[2026-04-04 19:28:44] 2026-04-04 23:27:44,621 | INFO     | all job control threads have been joined
[2026-04-04 19:28:44] 2026-04-04 23:27:44,954 | INFO     | [job] retrieve thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:44,955 | INFO     | [job] queue monitor thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:44,980 | INFO     | [data] control thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:45,221 | INFO     | [job] job monitor thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:45,277 | INFO     | [job] validate thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:45,297 | INFO     | [payload] validate_post thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:45,380 | INFO     | all payload control threads have been joined
[2026-04-04 19:28:44] 2026-04-04 23:27:45,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 19:28:44] 2026-04-04 23:27:45,562 | INFO     | [payload] failed_post thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:45,626 | INFO     | [job] control thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:45,667 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:45,878 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:46,069 | INFO     | [data] copytool_in thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:46,206 | INFO     | [data] copytool_out thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:46,320 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:46,385 | INFO     | [payload] control thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:49,476 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:27:54,025 | INFO     | job.realtimelogging is not enabled
[2026-04-04 19:28:44] 2026-04-04 23:27:55,030 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 19:28:44] 2026-04-04 23:28:15,067 | INFO     | PID=4314 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-04 19:28:44] 2026-04-04 23:28:15,067 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 19:28:44] 2026-04-04 23:28:15,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 19:28:44] 2026-04-04 23:28:15,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 19:28:44] 2026-04-04 23:28:38,476 | INFO     | [monitor] cgroup control has ended
[2026-04-04 19:28:44] 2026-04-04 23:28:39,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139925214439232)>', '<ExcThread(monitor, started 139924170852096)>']
[2026-04-04 19:28:44] 2026-04-04 23:28:40,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 19:28:44] 2026-04-04 23:28:40,211 | INFO     | [monitor] control thread has ended
[2026-04-04 19:28:44] 2026-04-04 23:28:44,263 | INFO     | all workflow threads have been joined
[2026-04-04 19:28:44] 2026-04-04 23:28:44,268 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 19:28:44] 2026-04-04 23:28:44,269 | INFO     | traces error code: 0
[2026-04-04 19:28:44] 2026-04-04 23:28:44,269 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 19:28:44] 2026-04-04 23:28:44,362 [wrapper] ==== pilot stdout END ====
[2026-04-04 19:28:44] 2026-04-04 23:28:44,365 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 19:28:44] 2026-04-04 23:28:44,369 [wrapper] pilotpid: 4314
[2026-04-04 19:28:44] 2026-04-04 23:28:44,373 [wrapper] Pilot exit status: 0
[2026-04-04 19:28:44] 2026-04-04 23:28:44,388 [wrapper] pandaids: 7074299799
[2026-04-04 19:28:44] 2026-04-04 23:28:44,435 [wrapper] cleanup supervisor_pilot 30815 4315
[2026-04-04 19:28:44] 2026-04-04 23:28:44,439 [wrapper] Test setup, not cleaning
[2026-04-04 19:28:44] 2026-04-04 23:28:44,443 [wrapper] apfmon messages muted
[2026-04-04 19:28:44] 2026-04-04 23:28:44,447 [wrapper] ==== wrapper stdout END ====
[2026-04-04 19:28:44] 2026-04-04 23:28:44,451 [wrapper] ==== wrapper stderr END ====
[2026-04-04 19:28:44]  *** Error codes and diagnostics ***
[2026-04-04 19:28:44]     "exeErrorCode": 0,
[2026-04-04 19:28:44]     "pilotErrorCode": 0,
[2026-04-04 19:28:44]  *** Listing of results directory ***
[2026-04-04 19:28:44] total 442652
[2026-04-04 19:28:44] -rw-r--r-- 1 boincer umatlas    644034 Mar 30 11:50 pilot3.tar.gz
[2026-04-04 19:28:44] -rwx------ 1 boincer umatlas     36322 Mar 30 11:53 runpilot2-wrapper.sh
[2026-04-04 19:28:44] -rw-r--r-- 1 boincer umatlas      5118 Mar 30 11:55 queuedata.json
[2026-04-04 19:28:44] -rw-r--r-- 1 boincer umatlas       100 Apr  4 18:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 19:28:44] -rwxr-xr-x 1 boincer umatlas      7986 Apr  4 18:12 run_atlas
[2026-04-04 19:28:44] -rw-r--r-- 1 boincer umatlas       105 Apr  4 18:12 job.xml
[2026-04-04 19:28:44] -rw-r--r-- 2 boincer umatlas 268898671 Apr  4 18:12 EVNT.49474487._000003.pool.root.1
[2026-04-04 19:28:44] -rw-r--r-- 2 boincer umatlas     15845 Apr  4 18:12 start_atlas.sh
[2026-04-04 19:28:44] drwxrwx--x 2 boincer umatlas      4096 Apr  4 18:12 shared
[2026-04-04 19:28:44] -rw-r--r-- 2 boincer umatlas    656746 Apr  4 18:12 input.tar.gz
[2026-04-04 19:28:44] -rw-r--r-- 1 boincer umatlas         0 Apr  4 18:12 boinc_lockfile
[2026-04-04 19:28:44] -rw-r--r-- 1 boincer umatlas      2582 Apr  4 18:12 pandaJob.out
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas        57 Apr  4 18:12 setup.sh.local
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas   1005096 Apr  4 18:12 agis_schedconf.cvmfs.json
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas   1511579 Apr  4 18:12 agis_ddmendpoints.agis.ALL.json
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas       445 Apr  4 18:12 workernode_map.json
[2026-04-04 19:28:44] drwx------ 5 boincer umatlas      4096 Apr  4 18:12 pilot3
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas 178697322 Apr  4 19:27 HITS.49499687._000062.pool.root.1
[2026-04-04 19:28:44] -rw-r--r-- 1 boincer umatlas      5953 Apr  4 19:27 init_data.xml
[2026-04-04 19:28:44] -rw-r--r-- 1 boincer umatlas       529 Apr  4 19:27 boinc_task_state.xml
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas        95 Apr  4 19:27 pilot_heartbeat.json
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas      1044 Apr  4 19:27 memory_monitor_summary.json
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas    360740 Apr  4 19:27 log.49499687._000062.job.log.tgz.1
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas      6426 Apr  4 19:27 heartbeat_new.json
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas      6317 Apr  4 19:27 heartbeat.json
[2026-04-04 19:28:44] -rw-r--r-- 1 boincer umatlas      8192 Apr  4 19:28 boinc_mmap_file
[2026-04-04 19:28:44] -rw-r--r-- 1 boincer umatlas        27 Apr  4 19:28 wrapper_checkpoint.txt
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas      4998 Apr  4 19:28 pilotlog.txt
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas    439371 Apr  4 19:28 log.49499687._000062.job.log.1
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas       357 Apr  4 19:28 output.list
[2026-04-04 19:28:44] -rw-r--r-- 1 boincer umatlas       620 Apr  4 19:28 runtime_log
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas    819200 Apr  4 19:28 result.tar.gz
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas       660 Apr  4 19:28 tLyLDmu6TR9n9Rq4apOajLDm4fhM0noT9bVoINGKDmT6PKDm0H9Lbn.diag
[2026-04-04 19:28:44] -rw-r--r-- 1 boincer umatlas      9343 Apr  4 19:28 runtime_log.err
[2026-04-04 19:28:44] -rw-r--r-- 1 boincer umatlas     21120 Apr  4 19:28 stderr.txt
[2026-04-04 19:28:44] HITS file was successfully produced:
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas 178697322 Apr  4 19:27 shared/HITS.pool.root.1
[2026-04-04 19:28:44]  *** Contents of shared directory: ***
[2026-04-04 19:28:44] total 438580
[2026-04-04 19:28:44] -rw-r--r-- 2 boincer umatlas 268898671 Apr  4 18:12 ATLAS.root_0
[2026-04-04 19:28:44] -rw-r--r-- 2 boincer umatlas     15845 Apr  4 18:12 start_atlas.sh
[2026-04-04 19:28:44] -rw-r--r-- 2 boincer umatlas    656746 Apr  4 18:12 input.tar.gz
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas 178697322 Apr  4 19:27 HITS.pool.root.1
[2026-04-04 19:28:44] -rw------- 1 boincer umatlas    819200 Apr  4 19:28 result.tar.gz
19:28:46 (32537): run_atlas exited; CPU time 48838.268562
19:28:46 (32537): called boinc_finish(0)

</stderr_txt>
]]>

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