Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
17:07:35 (188622): wrapper (7.7.26015): starting
17:07:35 (188622): wrapper: running run_atlas (--nthreads 4)
[2026-04-04 17:07:35] Arguments: --nthreads 4
[2026-04-04 17:07:35] Threads: 4
[2026-04-04 17:07:35] Checking for CVMFS
[2026-04-04 17:07:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-04 17:07:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-04 17:07:36] Running cvmfs_config stat atlas.cern.ch
[2026-04-04 17:07:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-04 17:07:36] 2.13.3.0 4070849 1364 56132 158088 1 49 3053879 4096001 847 130560 0 817447 99.989 44692 1117 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-04-04 17:07:36] CVMFS is ok
[2026-04-04 17:07:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-04 17:07:36] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-04 17:07:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-04 17:07:36] Further information can be found at the LHC@home message board.
[2026-04-04 17:07:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-04 17:07:36] Checking for apptainer binary...
[2026-04-04 17:07:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-04 17:07:36] Running /usr/bin/apptainer --version
[2026-04-04 17:07:36] apptainer version 1.4.5
[2026-04-04 17:07:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-04 17:07:36] T3500-Ubuntu
[2026-04-04 17:07:36] apptainer works
[2026-04-04 17:07:36] Set ATHENA_PROC_NUMBER=4
[2026-04-04 17:07:36] Set ATHENA_CORE_NUMBER=4
[2026-04-04 17:07:36] Starting ATLAS job with PandaID=7071936529
[2026-04-04 17:07:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 22:50:33]  *** The last 200 lines of the pilot log: ***
[2026-04-04 22:50:33] 2026-04-05 02:49:28,222 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-04 22:50:33] 2026-04-05 02:49:28,222 | INFO     | log transfer has been attempted: DONE
[2026-04-04 22:50:33] 2026-04-05 02:49:28,222 | INFO     | job 7071936529 has finished - writing final server update
[2026-04-04 22:50:33] 2026-04-05 02:49:28,222 | INFO     | total number of processed events: 400 (read)
[2026-04-04 22:50:33] 2026-04-05 02:49:28,229 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/9/PanDA_Pilot-7071936529/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 22:50:33] 2026-04-05 02:49:28,230 | INFO     | extracted standard info from prmon json
[2026-04-04 22:50:33] 2026-04-05 02:49:28,230 | INFO     | extracted standard memory fields from prmon json
[2026-04-04 22:50:33] 2026-04-05 02:49:28,230 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-04 22:50:33] 2026-04-05 02:49:28,230 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-04 22:50:33] 2026-04-05 02:49:28,230 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-04 22:50:33] 2026-04-05 02:49:28,236 | INFO     | fitting pss+swap vs Time
[2026-04-04 22:50:33] 2026-04-05 02:49:28,237 | INFO     | sum of square deviations: 11762304260.0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,239 | INFO     | sum of deviations: 3161218036.5000114
[2026-04-04 22:50:33] 2026-04-05 02:49:28,240 | INFO     | mean x: 1775347116.5
[2026-04-04 22:50:33] 2026-04-05 02:49:28,240 | INFO     | mean y: 2334463.074404762
[2026-04-04 22:50:33] 2026-04-05 02:49:28,240 | INFO     | intersect: -474804981.856778
[2026-04-04 22:50:33] 2026-04-05 02:49:28,241 | INFO     | chi2: 2.3035897472153293
[2026-04-04 22:50:33] 2026-04-05 02:49:28,241 | INFO     | sum of square deviations: 11244973630.0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,244 | INFO     | sum of deviations: 23336305180.0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,244 | INFO     | mean x: 1775346964.0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,244 | INFO     | mean y: 2340338.664652568
[2026-04-04 22:50:33] 2026-04-05 02:49:28,244 | INFO     | intersect: -3681975864.7776566
[2026-04-04 22:50:33] 2026-04-05 02:49:28,245 | INFO     | chi2: 1.5820599576081558
[2026-04-04 22:50:33] 2026-04-05 02:49:28,245 | INFO     | current chi2=1.5820599576081558 (change=31.321974343712345 %)
[2026-04-04 22:50:33] 2026-04-05 02:49:28,245 | INFO     | sum of square deviations: 10743038637.5
[2026-04-04 22:50:33] 2026-04-05 02:49:28,248 | INFO     | sum of deviations: 23029596509.0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,248 | INFO     | mean x: 1775346811.5
[2026-04-04 22:50:33] 2026-04-05 02:49:28,248 | INFO     | mean y: 2340245.472392638
[2026-04-04 22:50:33] 2026-04-05 02:49:28,249 | INFO     | intersect: -3803428505.062335
[2026-04-04 22:50:33] 2026-04-05 02:49:28,249 | INFO     | chi2: 1.5824630708372474
[2026-04-04 22:50:33] 2026-04-05 02:49:28,249 | INFO     | current chi2=1.5824630708372474 (change=-0.025480275077629677 %)
[2026-04-04 22:50:33] 2026-04-05 02:49:28,249 | INFO     | right removable region: 325
[2026-04-04 22:50:33] 2026-04-05 02:49:28,250 | INFO     | sum of square deviations: 11244973630.0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,252 | INFO     | sum of deviations: -40008705376.0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,253 | INFO     | mean x: 1775347269.0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,253 | INFO     | mean y: 2347077.9456193354
[2026-04-04 22:50:33] 2026-04-05 02:49:28,253 | INFO     | intersect: 6318888864.758793
[2026-04-04 22:50:33] 2026-04-05 02:49:28,253 | INFO     | chi2: 0.8814676915369717
[2026-04-04 22:50:33] 2026-04-05 02:49:28,253 | INFO     | current chi2=0.8814676915369717 (change=61.73504016491979 %)
[2026-04-04 22:50:33] 2026-04-05 02:49:28,254 | INFO     | sum of square deviations: 10743038637.5
[2026-04-04 22:50:33] 2026-04-05 02:49:28,257 | INFO     | sum of deviations: -22585372884.499996
[2026-04-04 22:50:33] 2026-04-05 02:49:28,257 | INFO     | mean x: 1775347421.5
[2026-04-04 22:50:33] 2026-04-05 02:49:28,257 | INFO     | mean y: 2341778.156441718
[2026-04-04 22:50:33] 2026-04-05 02:49:28,257 | INFO     | intersect: 3734701389.537676
[2026-04-04 22:50:33] 2026-04-05 02:49:28,258 | INFO     | chi2: 0.7833274856207569
[2026-04-04 22:50:33] 2026-04-05 02:49:28,258 | INFO     | current chi2=0.7833274856207569 (change=11.133726948640911 %)
[2026-04-04 22:50:33] 2026-04-05 02:49:28,258 | INFO     | left removable region: 20
[2026-04-04 22:50:33] 2026-04-05 02:49:28,258 | INFO     | sum of square deviations: 8797783560.0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,261 | INFO     | sum of deviations: 8740032359.0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,261 | INFO     | mean x: 1775347391.0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,261 | INFO     | mean y: 2344176.7803278686
[2026-04-04 22:50:33] 2026-04-05 02:49:28,261 | INFO     | intersect: -1761349319.426372
[2026-04-04 22:50:33] 2026-04-05 02:49:28,261 | INFO     | chi2: 0.0020658558933444107
[2026-04-04 22:50:33] 2026-04-05 02:49:28,262 | INFO     | current memory leak: 0.99 B/s (using 305 data points, chi2=0.00)
[2026-04-04 22:50:33] 2026-04-05 02:49:28,262 | INFO     | could have reported an average CPU frequency of 3199 MHz (15 samples)
[2026-04-04 22:50:33] 2026-04-05 02:49:28,262 | INFO     | ..............................
[2026-04-04 22:50:33] 2026-04-05 02:49:28,263 | INFO     | . Timing measurements:
[2026-04-04 22:50:33] 2026-04-05 02:49:28,263 | INFO     | . get job = 0 s
[2026-04-04 22:50:33] 2026-04-05 02:49:28,263 | INFO     | . initial setup = 6 s
[2026-04-04 22:50:33] 2026-04-05 02:49:28,263 | INFO     | . payload setup = 8 s
[2026-04-04 22:50:33] 2026-04-05 02:49:28,263 | INFO     | . stage-in = 0 s
[2026-04-04 22:50:33] 2026-04-05 02:49:28,263 | INFO     | . payload execution = 20461 s
[2026-04-04 22:50:33] 2026-04-05 02:49:28,263 | INFO     | . stage-out = 4 s
[2026-04-04 22:50:33] 2026-04-05 02:49:28,263 | INFO     | . log creation = 0 s
[2026-04-04 22:50:33] 2026-04-05 02:49:28,263 | INFO     | ..............................
[2026-04-04 22:50:33] 2026-04-05 02:49:28,357 | INFO     | 
[2026-04-04 22:50:33] 2026-04-05 02:49:28,357 | INFO     | job summary report
[2026-04-04 22:50:33] 2026-04-05 02:49:28,357 | INFO     | --------------------------------------------------
[2026-04-04 22:50:33] 2026-04-05 02:49:28,358 | INFO     | PanDA job id: 7071936529
[2026-04-04 22:50:33] 2026-04-05 02:49:28,358 | INFO     | task id: 49176683
[2026-04-04 22:50:33] 2026-04-05 02:49:28,358 | INFO     | errors: (none)
[2026-04-04 22:50:33] 2026-04-05 02:49:28,358 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 22:50:33] 2026-04-05 02:49:28,358 | INFO     | pilot state: finished 
[2026-04-04 22:50:33] 2026-04-05 02:49:28,358 | INFO     | transexitcode: 0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,358 | INFO     | exeerrorcode: 0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,358 | INFO     | exeerrordiag: 
[2026-04-04 22:50:33] 2026-04-05 02:49:28,358 | INFO     | exitcode: 0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,358 | INFO     | exitmsg: OK
[2026-04-04 22:50:33] 2026-04-05 02:49:28,358 | INFO     | cpuconsumptiontime: 80382 s
[2026-04-04 22:50:33] 2026-04-05 02:49:28,359 | INFO     | nevents: 400
[2026-04-04 22:50:33] 2026-04-05 02:49:28,359 | INFO     | neventsw: 0
[2026-04-04 22:50:33] 2026-04-05 02:49:28,359 | INFO     | pid: 197421
[2026-04-04 22:50:33] 2026-04-05 02:49:28,359 | INFO     | pgrp: 197421
[2026-04-04 22:50:33] 2026-04-05 02:49:28,359 | INFO     | corecount: 4
[2026-04-04 22:50:33] 2026-04-05 02:49:28,359 | INFO     | event service: False
[2026-04-04 22:50:33] 2026-04-05 02:49:28,359 | INFO     | sizes: {0: 2280323, 11: 2280323, 20474: 2313862, 20479: 2322944, 20481: 2323110}
[2026-04-04 22:50:33] 2026-04-05 02:49:28,359 | INFO     | --------------------------------------------------
[2026-04-04 22:50:33] 2026-04-05 02:49:28,359 | INFO     | 
[2026-04-04 22:50:33] 2026-04-05 02:49:28,359 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/9
[2026-04-04 22:50:33] 2026-04-05 02:49:28,383 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,384 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,384 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,384 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,384 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,384 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,385 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,385 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,385 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,385 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,385 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,385 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,385 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,385 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,385 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,385 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,386 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 22:50:33] 2026-04-05 02:49:28,386 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,386 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 22:50:33] 2026-04-05 02:49:28,386 | INFO     | job 7071936529 has completed (purged errors)
[2026-04-04 22:50:33] 2026-04-05 02:49:28,386 | INFO     | overall cleanup function is called
[2026-04-04 22:50:33] 2026-04-05 02:49:29,394 | INFO     | --- collectZombieJob: --- 10, [197421]
[2026-04-04 22:50:33] 2026-04-05 02:49:29,394 | INFO     | zombie collector waiting for pid 197421
[2026-04-04 22:50:33] 2026-04-05 02:49:29,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 22:50:33] 2026-04-05 02:49:29,394 | INFO     | collected zombie processes
[2026-04-04 22:50:33] 2026-04-05 02:49:29,395 | INFO     | will attempt to kill all subprocesses of pid=197421
[2026-04-04 22:50:33] 2026-04-05 02:49:29,626 | INFO     | process IDs to be killed: [197421] (in reverse order)
[2026-04-04 22:50:33] 2026-04-05 02:49:29,706 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 22:50:33] 2026-04-05 02:49:29,707 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 22:50:33] 2026-04-05 02:49:29,713 | INFO     | did not find any defunct processes belonging to 197421
[2026-04-04 22:50:33] 2026-04-05 02:49:29,720 | INFO     | did not find any defunct processes belonging to 197421
[2026-04-04 22:50:33] 2026-04-05 02:49:29,720 | INFO     | ready for new job
[2026-04-04 22:50:33] 2026-04-05 02:49:29,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-04 22:50:33] 2026-04-05 02:49:29,722 | INFO     | **************************************
[2026-04-04 22:50:33] 2026-04-05 02:49:29,722 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-04 22:50:33] 2026-04-05 02:49:29,723 | INFO     | **************************************
[2026-04-04 22:50:33] 2026-04-05 02:49:29,723 | INFO     | 
[2026-04-04 22:50:33] 2026-04-05 02:49:29,725 | INFO     | architecture information:
[2026-04-04 22:50:33] 2026-04-05 02:49:29,725 | INFO     | executing command: cat /etc/os-release
[2026-04-04 22:50:33] 2026-04-05 02:49:29,744 | INFO     | cat /etc/os-release:
[2026-04-04 22:50:33] NAME="CentOS Linux"
[2026-04-04 22:50:33] VERSION="7 (Core)"
[2026-04-04 22:50:33] ID="centos"
[2026-04-04 22:50:33] ID_LIKE="rhel fedora"
[2026-04-04 22:50:33] VERSION_ID="7"
[2026-04-04 22:50:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 22:50:33] ANSI_COLOR="0;31"
[2026-04-04 22:50:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 22:50:33] HOME_URL="https://www.centos.org/"
[2026-04-04 22:50:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 22:50:33] 
[2026-04-04 22:50:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 22:50:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 22:50:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 22:50:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 22:50:33] 
[2026-04-04 22:50:33] 2026-04-05 02:49:29,744 | INFO     | **************************************
[2026-04-04 22:50:33] 2026-04-05 02:49:30,247 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/9
[2026-04-04 22:50:33] 2026-04-05 02:49:30,269 | INFO     | sufficient remaining disk space (404701052928 B)
[2026-04-04 22:50:33] 2026-04-05 02:49:30,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 22:50:33] 2026-04-05 02:49:30,269 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 22:50:33] 2026-04-05 02:49:30,269 | INFO     | update_server=False
[2026-04-04 22:50:33] 2026-04-05 02:49:30,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-04 22:50:33] 2026-04-05 02:49:30,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 22:50:33] 2026-04-05 02:49:30,522 | INFO     | all job control threads have been joined
[2026-04-04 22:50:33] 2026-04-05 02:49:30,790 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 22:50:33] 2026-04-05 02:49:30,790 | INFO     | aborting loop
[2026-04-04 22:50:33] 2026-04-05 02:49:31,159 | INFO     | all data control threads have been joined
[2026-04-04 22:50:33] 2026-04-05 02:49:31,245 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 22:50:33] 2026-04-05 02:49:31,274 | INFO     | [job] retrieve thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:31,275 | INFO     | [job] queue monitor thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:31,402 | INFO     | [payload] validate_post thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:31,450 | INFO     | [job] validate thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:31,527 | INFO     | [job] control thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:31,576 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:31,581 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:31,620 | INFO     | all payload control threads have been joined
[2026-04-04 22:50:33] 2026-04-05 02:49:31,796 | INFO     | [job] job monitor thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:32,016 | INFO     | [data] copytool_in thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:32,164 | INFO     | [data] control thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:32,170 | INFO     | [payload] failed_post thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:32,195 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:32,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 22:50:33] 2026-04-05 02:49:32,603 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:32,625 | INFO     | [payload] control thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:33,250 | INFO     | [data] copytool_out thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:49:36,412 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 22:50:33] 2026-04-05 02:50:00,510 | INFO     | PID=192826 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-04 22:50:33] 2026-04-05 02:50:00,510 | INFO     | .. there are 4 such processes running
[2026-04-04 22:50:33] 2026-04-05 02:50:00,510 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 22:50:33] 2026-04-05 02:50:00,510 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 22:50:33] 2026-04-05 02:50:00,510 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 22:50:33] 2026-04-05 02:50:26,954 | INFO     | [monitor] cgroup control has ended
[2026-04-04 22:50:33] 2026-04-05 02:50:27,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135195725936448)>', '<ExcThread(monitor, started 135195076314880)>']
[2026-04-04 22:50:33] 2026-04-05 02:50:28,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 22:50:33] 2026-04-05 02:50:28,649 | INFO     | [monitor] control thread has ended
[2026-04-04 22:50:33] 2026-04-05 02:50:33,016 | INFO     | all workflow threads have been joined
[2026-04-04 22:50:33] 2026-04-05 02:50:33,017 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 22:50:33] 2026-04-05 02:50:33,017 | INFO     | traces error code: 0
[2026-04-04 22:50:33] 2026-04-05 02:50:33,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 22:50:33] 2026-04-05 02:50:33,156 [wrapper] ==== pilot stdout END ====
[2026-04-04 22:50:33] 2026-04-05 02:50:33,160 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 22:50:33] 2026-04-05 02:50:33,164 [wrapper] pilotpid: 192826
[2026-04-04 22:50:33] 2026-04-05 02:50:33,168 [wrapper] Pilot exit status: 0
[2026-04-04 22:50:33] 2026-04-05 02:50:33,180 [wrapper] pandaids: 7071936529
[2026-04-04 22:50:33] 2026-04-05 02:50:33,227 [wrapper] cleanup supervisor_pilot  286991 192827
[2026-04-04 22:50:33] 2026-04-05 02:50:33,230 [wrapper] Test setup, not cleaning
[2026-04-04 22:50:33] 2026-04-05 02:50:33,233 [wrapper] apfmon messages muted
[2026-04-04 22:50:33] 2026-04-05 02:50:33,237 [wrapper] ==== wrapper stdout END ====
[2026-04-04 22:50:33] 2026-04-05 02:50:33,240 [wrapper] ==== wrapper stderr END ====
[2026-04-04 22:50:33]  *** Error codes and diagnostics ***
[2026-04-04 22:50:33]     "exeErrorCode": 0,
[2026-04-04 22:50:33]     "exeErrorDiag": "",
[2026-04-04 22:50:33]     "pilotErrorCode": 0,
[2026-04-04 22:50:33]     "pilotErrorDiag": "",
[2026-04-04 22:50:33]  *** Listing of results directory ***
[2026-04-04 22:50:33] total 489924
[2026-04-04 22:50:33] -rw-r--r-- 1 whitlerd whitlerd      5118 Mar 28 05:12 queuedata.json
[2026-04-04 22:50:33] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 28 05:12 pilot3.tar.gz
[2026-04-04 22:50:33] -rwx------ 1 whitlerd whitlerd     36322 Mar 28 05:12 runpilot2-wrapper.sh
[2026-04-04 22:50:33] -rw-rw-r-- 1 whitlerd whitlerd       100 Apr  4 17:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 22:50:33] -rwxr-xr-x 1 whitlerd whitlerd      7986 Apr  4 17:07 run_atlas
[2026-04-04 22:50:33] -rw-rw-r-- 1 whitlerd whitlerd       105 Apr  4 17:07 job.xml
[2026-04-04 22:50:33] -rw-r--r-- 2 whitlerd whitlerd 247616476 Apr  4 17:07 EVNT.49134836._000008.pool.root.1
[2026-04-04 22:50:33] -rw-r--r-- 2 whitlerd whitlerd    597553 Apr  4 17:07 input.tar.gz
[2026-04-04 22:50:33] drwxrwx--x 2 whitlerd whitlerd      4096 Apr  4 17:07 shared
[2026-04-04 22:50:33] -rw-r--r-- 2 whitlerd whitlerd     15845 Apr  4 17:07 start_atlas.sh
[2026-04-04 22:50:33] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr  4 17:07 boinc_setup_complete
[2026-04-04 22:50:33] -rw-rw-r-- 1 whitlerd whitlerd      9207 Apr  4 17:07 init_data.xml
[2026-04-04 22:50:33] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr  4 17:07 boinc_lockfile
[2026-04-04 22:50:33] -rw-rw-r-- 1 whitlerd whitlerd      2620 Apr  4 17:07 pandaJob.out
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd   1005088 Apr  4 17:07 agis_schedconf.cvmfs.json
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd       437 Apr  4 17:07 workernode_map.json
[2026-04-04 22:50:33] drwx------ 5 whitlerd whitlerd      4096 Apr  4 17:07 pilot3
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd 243281349 Apr  4 22:48 HITS.49176683._000420.pool.root.1
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd      1043 Apr  4 22:49 memory_monitor_summary.json
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd        95 Apr  4 22:49 pilot_heartbeat.json
[2026-04-04 22:50:33] -rw-rw-r-- 1 whitlerd whitlerd       531 Apr  4 22:49 boinc_task_state.xml
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd   1511579 Apr  4 22:49 agis_ddmendpoints.agis.ALL.json
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd    495562 Apr  4 22:49 log.49176683._000420.job.log.tgz.1
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd      6338 Apr  4 22:49 heartbeat.json
[2026-04-04 22:50:33] -rw-rw-r-- 1 whitlerd whitlerd      8192 Apr  4 22:50 boinc_mmap_file
[2026-04-04 22:50:33] -rw-rw-r-- 1 whitlerd whitlerd        28 Apr  4 22:50 wrapper_checkpoint.txt
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd      4833 Apr  4 22:50 pilotlog.txt
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd   2926892 Apr  4 22:50 log.49176683._000420.job.log.1
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd       357 Apr  4 22:50 output.list
[2026-04-04 22:50:33] -rw-rw-r-- 1 whitlerd whitlerd       620 Apr  4 22:50 runtime_log
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd   3440640 Apr  4 22:50 result.tar.gz
[2026-04-04 22:50:33] -rw-rw-r-- 1 whitlerd whitlerd      9020 Apr  4 22:50 runtime_log.err
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd       654 Apr  4 22:50 g1vLDmZteQ9n9Rq4apOajLDm4fhM0noT9bVoINGKDmA4JKDmv8foEn.diag
[2026-04-04 22:50:33] -rw-rw-r-- 1 whitlerd whitlerd     21131 Apr  4 22:50 stderr.txt
[2026-04-04 22:50:33] HITS file was successfully produced:
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd 243281349 Apr  4 22:48 shared/HITS.pool.root.1
[2026-04-04 22:50:33]  *** Contents of shared directory: ***
[2026-04-04 22:50:33] total 483364
[2026-04-04 22:50:33] -rw-r--r-- 2 whitlerd whitlerd 247616476 Apr  4 17:07 ATLAS.root_0
[2026-04-04 22:50:33] -rw-r--r-- 2 whitlerd whitlerd    597553 Apr  4 17:07 input.tar.gz
[2026-04-04 22:50:33] -rw-r--r-- 2 whitlerd whitlerd     15845 Apr  4 17:07 start_atlas.sh
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd 243281349 Apr  4 22:48 HITS.pool.root.1
[2026-04-04 22:50:33] -rw------- 1 whitlerd whitlerd   3440640 Apr  4 22:50 result.tar.gz
22:50:34 (188622): run_atlas exited; CPU time 80820.371749
22:50:34 (188622): called boinc_finish(0)

</stderr_txt>
]]>

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