Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-04 17:07:17 (7620): vboxwrapper version 26210
2026-04-04 17:07:17 (7620): BOINC client version: 8.2.9
2026-04-04 17:07:18 (7620): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-04-04 17:07:18 (7620): Successfully copied 'init_data.xml' to the shared directory.
2026-04-04 17:07:19 (7620): Create VM. (boinc_e7e247d6a7787828, slot#45)
2026-04-04 17:07:19 (7620): Setting Memory Size for VM. (4608MB)
2026-04-04 17:07:19 (7620): Setting CPU Count for VM. (2)
2026-04-04 17:07:20 (7620): Setting Chipset Options for VM.
2026-04-04 17:07:20 (7620): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-04 17:07:20 (7620): Setting Boot Options for VM.
2026-04-04 17:07:21 (7620): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-04 17:07:21 (7620): Enabling VM Network Access.
2026-04-04 17:07:21 (7620): Disabling USB Support for VM.
2026-04-04 17:07:21 (7620): Disabling COM Port Support for VM.
2026-04-04 17:07:22 (7620): Disabling LPT Port Support for VM.
2026-04-04 17:07:22 (7620): Disabling Audio Support for VM.
2026-04-04 17:07:22 (7620): Disabling Clipboard Support for VM.
2026-04-04 17:07:22 (7620): Disabling Drag and Drop Support for VM.
2026-04-04 17:07:23 (7620): Adding storage controller(s) to VM.
2026-04-04 17:07:23 (7620): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-04 17:07:24 (7620): Adding VirtualBox Guest Additions to VM.
2026-04-04 17:07:24 (7620): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-04 17:07:24 (7620): forwarding host port 54967 to guest port 80
2026-04-04 17:07:24 (7620): Enabling remote desktop for VM.
2026-04-04 17:07:25 (7620): Required extension pack not installed, remote desktop not enabled.
2026-04-04 17:07:25 (7620): Enabling shared directory for VM.
2026-04-04 17:07:25 (7620): Starting VM using VBoxManage interface. (boinc_e7e247d6a7787828, slot#45)
2026-04-04 17:07:29 (7620): Successfully started VM. (PID = '12220')
2026-04-04 17:07:29 (7620): Reporting VM Process ID to BOINC.
2026-04-04 17:07:29 (7620): Guest Log: BIOS: VirtualBox 7.2.6
2026-04-04 17:07:29 (7620): Guest Log: CPUID EDX: 0x178bfbff
2026-04-04 17:07:29 (7620): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-04 17:07:29 (7620): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-04 17:07:29 (7620): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-04 17:07:29 (7620): Detected: Web Application Enabled (http://localhost:54967)
2026-04-04 17:07:29 (7620): Preference change detected
2026-04-04 17:07:29 (7620): Setting CPU throttle for VM. (100%)
2026-04-04 17:07:29 (7620): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-04 17:07:31 (7620): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-04 17:07:31 (7620): Guest Log: BIOS: Booting from Hard Disk...
2026-04-04 17:07:33 (7620): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-04 17:07:33 (7620): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-04 17:07:33 (7620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-04 17:07:37 (7620): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-04 17:07:37 (7620): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-04 17:07:40 (7620): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-04 17:07:40 (7620): Guest Log: 00:00:00.000053 main     Log opened 2026-04-04T17:07:38.496533000Z
2026-04-04 17:07:40 (7620): Guest Log: 00:00:00.000119 main     OS Product: Linux
2026-04-04 17:07:40 (7620): Guest Log: 00:00:00.000131 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-04 17:07:40 (7620): Guest Log: 00:00:00.000140 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-04 17:07:40 (7620): Guest Log: 00:00:00.000149 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-04 17:07:40 (7620): Guest Log: 00:00:00.000149 main     Process ID: 1276
2026-04-04 17:07:40 (7620): Guest Log: 00:00:00.000150 main     Package type: LINUX_64BITS_GENERIC
2026-04-04 17:07:40 (7620): Guest Log: 00:00:00.000561 main     5.2.32 r132073 started. Verbose level = 0
2026-04-04 17:07:40 (7620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-04 17:07:40 (7620): Guest Log: [INFO] Mounting shared directory
2026-04-04 17:07:40 (7620): Guest Log: [INFO] Checking for init_data.xml
2026-04-04 17:07:43 (7620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-04 17:07:43 (7620): Guest Log: [INFO] Detected branch: prod
2026-04-04 17:07:43 (7620): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-04 17:07:43 (7620): Guest Log: Copying input files
2026-04-04 17:07:44 (7620): Guest Log: Copied input files into RunAtlas.
2026-04-04 17:07:44 (7620): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-04-04 17:07:50 (7620): Guest Log: 00:00:10.003243 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 732 503 000ns (GuestNow=1 775 315 269 766 587 000 ns GuestLast=1 775 322 458 499 090 000 ns fSetTimeLastLoop=true )
2026-04-04 17:07:52 (7620): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-04 17:07:52 (7620): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-04 17:07:52 (7620): Guest Log: 2.6.3.0 1550 0 33668 158080 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-04-04 17:07:52 (7620): Guest Log: copied the webapp to /var/www
2026-04-04 17:07:52 (7620): Guest Log: ATHENA_PROC_NUMBER=2
2026-04-04 17:07:52 (7620): Guest Log: ATHENA_CORE_NUMBER=2
2026-04-04 17:07:52 (7620): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-04 17:07:52 (7620): Guest Log:  *** Starting ATLAS job. (PandaID=7071982563 taskID=49176097) ***
2026-04-04 18:47:32 (7620): Status Report: Elapsed Time: '6000.000000'
2026-04-04 18:47:32 (7620): Status Report: CPU Time: '11638.203125'
2026-04-04 20:27:35 (7620): Status Report: Elapsed Time: '12000.000000'
2026-04-04 20:27:35 (7620): Status Report: CPU Time: '23603.609375'
2026-04-04 22:07:37 (7620): Status Report: Elapsed Time: '18000.000000'
2026-04-04 22:07:37 (7620): Status Report: CPU Time: '35566.234375'
2026-04-04 23:47:40 (7620): Status Report: Elapsed Time: '24000.000000'
2026-04-04 23:47:40 (7620): Status Report: CPU Time: '47515.843750'
2026-04-05 00:30:50 (7620): Guest Log:  *** Job finished ***
2026-04-05 00:30:50 (7620): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:29:53,363 | INFO     | [payload] control thread has finished
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:29:56,386 | INFO     | [data] queue_monitor thread has finished
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:33,453 | INFO     | [monitor] cgroup control has ended
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:33,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140397923018560)>', '<ExcThread(monitor, started 140397019907840)>']
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:34,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:34,154 | INFO     | [monitor] control thread has ended
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:38,776 | INFO     | all workflow threads have been joined
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:38,776 | INFO     | end of generic workflow (traces error code: 0)
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:38,776 | INFO     | traces error code: 0
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:38,776 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:38,842 [wrapper] ==== pilot stdout END ====
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:38,844 [wrapper] ==== wrapper stdout RESUME ====
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:38,846 [wrapper] pilotpid: 5913
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:38,848 [wrapper] Pilot exit status: 0
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:38,862 [wrapper] pandaids: 7071982563
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:38,879 [wrapper] cleanup supervisor_pilot 31564 5914
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:38,881 [wrapper] Test setup, not cleaning
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:38,883 [wrapper] apfmon messages muted
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:38,885 [wrapper] ==== wrapper stdout END ====
2026-04-05 00:30:50 (7620): Guest Log: 2026-04-04 22:30:38,887 [wrapper] ==== wrapper stderr END ====
2026-04-05 00:30:50 (7620): Guest Log:  *** Error codes and diagnostics ***
2026-04-05 00:30:50 (7620): Guest Log:     "exeErrorCode": 0,
2026-04-05 00:30:50 (7620): Guest Log:     "exeErrorDiag": "",
2026-04-05 00:30:50 (7620): Guest Log:     "pilotErrorCode": 0,
2026-04-05 00:30:50 (7620): Guest Log:     "pilotErrorDiag": "",
2026-04-05 00:30:50 (7620): Guest Log:  *** Listing of results directory ***
2026-04-05 00:30:50 (7620): Guest Log: total 239460
2026-04-05 00:30:50 (7620): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 28 10:35 pilot3.tar.gz
2026-04-05 00:30:50 (7620): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Mar 28 10:36 queuedata.json
2026-04-05 00:30:50 (7620): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 28 10:36 runpilot2-wrapper.sh
2026-04-05 00:30:50 (7620): Guest Log: -rwxr-xr-x. 1 atlas atlas      9473 Apr  4 15:07 init_data.xml
2026-04-05 00:30:50 (7620): Guest Log: -rwxr-xr-x. 1 atlas atlas    597559 Apr  4 15:07 input.tar.gz
2026-04-05 00:30:50 (7620): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Apr  4 15:07 start_atlas.sh
2026-04-05 00:30:50 (7620): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  4 15:07 EVNT.49132545._000010.pool.root.1 -> /data/./ATLAS.root_0
2026-04-05 00:30:50 (7620): Guest Log: -rw-r--r--. 1 atlas atlas      2610 Apr  4 15:07 pandaJob.out
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas        50 Apr  4 15:07 setup.sh.local
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas   1005123 Apr  4 15:08 agis_schedconf.cvmfs.json
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas       424 Apr  4 15:08 workernode_map.json
2026-04-05 00:30:50 (7620): Guest Log: drwx------. 5 atlas atlas      4096 Apr  4 15:08 pilot3
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas 232933010 Apr  4 22:29 HITS.49176097._001092.pool.root.1
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas      1038 Apr  4 22:29 memory_monitor_summary.json
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas   1511579 Apr  4 22:29 agis_ddmendpoints.agis.ALL.json
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas    520628 Apr  4 22:29 log.49176097._001092.job.log.tgz.1
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas        95 Apr  4 22:29 pilot_heartbeat.json
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas      6347 Apr  4 22:29 heartbeat.json
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas      4794 Apr  4 22:30 pilotlog.txt
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas   3678285 Apr  4 22:30 log.49176097._001092.job.log.1
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas       357 Apr  4 22:30 output.list
2026-04-05 00:30:50 (7620): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  4 22:30 runtime_log
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas   4218880 Apr  4 22:30 result.tar.gz
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas       656 Apr  4 22:30 fUoKDmtCgQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmZoHKDmqB86Qn.diag
2026-04-05 00:30:50 (7620): Guest Log: -rw-r--r--. 1 atlas atlas      9235 Apr  4 22:30 runtime_log.err
2026-04-05 00:30:50 (7620): Guest Log: Looking for outputfile HITS.49176097._001092.pool.root.1
2026-04-05 00:30:50 (7620): Guest Log: HITS file was successfully produced
2026-04-05 00:30:50 (7620): Guest Log: -rw-------. 1 atlas atlas 232933010 Apr  4 22:29 /home/atlas/RunAtlas/HITS.49176097._001092.pool.root.1
2026-04-05 00:30:50 (7620): Guest Log: Successfully finished the ATLAS job!
2026-04-05 00:30:50 (7620): Guest Log: Copying the results back to the shared directory!
2026-04-05 00:30:50 (7620): Guest Log:  *** Contents of shared directory: ***
2026-04-05 00:30:50 (7620): Guest Log: total 469848
2026-04-05 00:30:50 (7620): Guest Log: -rwxrwxrwx. 1 root root 243340127 Apr  4 15:07 ATLAS.root_0
2026-04-05 00:30:50 (7620): Guest Log: -rwxrwxrwx. 1 root root 232933010 Apr  4  2026 HITS.pool.root.1
2026-04-05 00:30:50 (7620): Guest Log: -rwxrwxrwx. 1 root root      9473 Apr  4 15:07 init_data.xml
2026-04-05 00:30:50 (7620): Guest Log: -rwxrwxrwx. 1 root root    597559 Apr  4 15:07 input.tar.gz
2026-04-05 00:30:50 (7620): Guest Log: -rwxrwxrwx. 1 root root   4218880 Apr  4  2026 result.tar.gz
2026-04-05 00:30:50 (7620): Guest Log: -rwxrwxrwx. 1 root root     15845 Apr  4 15:07 start_atlas.sh
2026-04-05 00:30:50 (7620): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-05 00:30:50 (7620): VM Completion File Detected.
2026-04-05 00:30:50 (7620): Powering off VM.
2026-04-05 00:30:51 (7620): Successfully stopped VM.
2026-04-05 00:30:51 (7620): Deregistering VM. (boinc_e7e247d6a7787828, slot#45)
2026-04-05 00:30:51 (7620): Removing network bandwidth throttle group from VM.
2026-04-05 00:30:51 (7620): Removing VM from VirtualBox.
2026-04-05 00:30:56 (7620): called boinc_finish(0)

</stderr_txt>
]]>

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