Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
09:17:58 (3894120): wrapper (7.7.26015): starting
09:17:58 (3894120): wrapper: running run_atlas (--nthreads 4)
[2026-04-04 09:17:58] Arguments: --nthreads 4
[2026-04-04 09:17:58] Threads: 4
[2026-04-04 09:17:58] Checking for CVMFS
[2026-04-04 09:17:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-04 09:17:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-04 09:17:58] Running cvmfs_config stat atlas.cern.ch
[2026-04-04 09:17:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-04 09:17:59] 2.13.3.0 3866999 6 44592 158077 1 188 3558022 4096001 1832 130560 0 105625 99.999 69 68 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-04-04 09:17:59] CVMFS is ok
[2026-04-04 09:17:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-04 09:17:59] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-04 09:17:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-04 09:17:59] Further information can be found at the LHC@home message board.
[2026-04-04 09:17:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-04 09:17:59] Checking for apptainer binary...
[2026-04-04 09:17:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-04 09:17:59] Running /usr/bin/apptainer --version
[2026-04-04 09:17:59] apptainer version 1.4.5
[2026-04-04 09:17:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-04 09:17:59] OptiPlex7070-Ubuntu
[2026-04-04 09:17:59] apptainer works
[2026-04-04 09:17:59] Set ATHENA_PROC_NUMBER=4
[2026-04-04 09:17:59] Set ATHENA_CORE_NUMBER=4
[2026-04-04 09:17:59] Starting ATLAS job with PandaID=7066814167
[2026-04-04 09:17:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 11:34:53]  *** The last 200 lines of the pilot log: ***
[2026-04-04 11:34:53] 2026-04-04 15:34:21,671 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-04 11:34:53] 2026-04-04 15:34:21,672 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-04 11:34:53] 2026-04-04 15:34:21,672 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-04 11:34:53] 2026-04-04 15:34:21,674 | INFO     | fitting pss+swap vs Time
[2026-04-04 11:34:53] 2026-04-04 15:34:21,674 | INFO     | sum of square deviations: 746051197.5
[2026-04-04 11:34:53] 2026-04-04 15:34:21,674 | INFO     | sum of deviations: 1117292775.0000014
[2026-04-04 11:34:53] 2026-04-04 15:34:21,675 | INFO     | mean x: 1775312767.5
[2026-04-04 11:34:53] 2026-04-04 15:34:21,675 | INFO     | mean y: 2351060.417910448
[2026-04-04 11:34:53] 2026-04-04 15:34:21,675 | INFO     | intersect: -2656372811.5359406
[2026-04-04 11:34:53] 2026-04-04 15:34:21,675 | INFO     | chi2: 1.6085174549042758
[2026-04-04 11:34:53] 2026-04-04 15:34:21,675 | INFO     | sum of square deviations: 665612480.0
[2026-04-04 11:34:53] 2026-04-04 15:34:21,676 | INFO     | sum of deviations: 1540451543.9999979
[2026-04-04 11:34:53] 2026-04-04 15:34:21,676 | INFO     | mean x: 1775312615.0
[2026-04-04 11:34:53] 2026-04-04 15:34:21,676 | INFO     | mean y: 2351862.96124031
[2026-04-04 11:34:53] 2026-04-04 15:34:21,676 | INFO     | intersect: -4106319685.474005
[2026-04-04 11:34:53] 2026-04-04 15:34:21,676 | INFO     | chi2: 1.6104570048302467
[2026-04-04 11:34:53] 2026-04-04 15:34:21,676 | INFO     | current chi2=1.6104570048302467 (change=-0.12057997381733852 %)
[2026-04-04 11:34:53] 2026-04-04 15:34:21,677 | INFO     | right removable region: 128
[2026-04-04 11:34:53] 2026-04-04 15:34:21,677 | INFO     | sum of square deviations: 665612480.0
[2026-04-04 11:34:53] 2026-04-04 15:34:21,677 | INFO     | sum of deviations: -17483982504.000004
[2026-04-04 11:34:53] 2026-04-04 15:34:21,677 | INFO     | mean x: 1775312920.0
[2026-04-04 11:34:53] 2026-04-04 15:34:21,677 | INFO     | mean y: 2385635.92248062
[2026-04-04 11:34:53] 2026-04-04 15:34:21,678 | INFO     | intersect: 46635435593.767555
[2026-04-04 11:34:53] 2026-04-04 15:34:21,678 | INFO     | chi2: 0.04739524173960706
[2026-04-04 11:34:53] 2026-04-04 15:34:21,678 | INFO     | current chi2=0.04739524173960706 (change=97.05348290781043 %)
[2026-04-04 11:34:53] 2026-04-04 15:34:21,678 | INFO     | sum of square deviations: 591173875.0
[2026-04-04 11:34:53] 2026-04-04 15:34:21,679 | INFO     | sum of deviations: -16231148674.5
[2026-04-04 11:34:53] 2026-04-04 15:34:21,679 | INFO     | mean x: 1775313072.5
[2026-04-04 11:34:53] 2026-04-04 15:34:21,679 | INFO     | mean y: 2383058.669354839
[2026-04-04 11:34:53] 2026-04-04 15:34:21,679 | INFO     | intersect: 48745014697.34063
[2026-04-04 11:34:53] 2026-04-04 15:34:21,679 | INFO     | chi2: 0.046105614132899826
[2026-04-04 11:34:53] 2026-04-04 15:34:21,679 | INFO     | current chi2=0.046105614132899826 (change=2.7210064963747698 %)
[2026-04-04 11:34:53] 2026-04-04 15:34:21,679 | INFO     | left removable region: 20
[2026-04-04 11:34:53] 2026-04-04 15:34:21,680 | INFO     | sum of square deviations: 390582207.0
[2026-04-04 11:34:53] 2026-04-04 15:34:21,680 | INFO     | sum of deviations: -11692679836.0
[2026-04-04 11:34:53] 2026-04-04 15:34:21,680 | INFO     | mean x: 1775313194.5
[2026-04-04 11:34:53] 2026-04-04 15:34:21,680 | INFO     | mean y: 2377131.185185185
[2026-04-04 11:34:53] 2026-04-04 15:34:21,680 | INFO     | intersect: 53149111467.4856
[2026-04-04 11:34:53] 2026-04-04 15:34:21,680 | INFO     | chi2: 0.043265906444355275
[2026-04-04 11:34:53] 2026-04-04 15:34:21,681 | INFO     | current memory leak: -29.94 B/s (using 108 data points, chi2=0.04)
[2026-04-04 11:34:53] 2026-04-04 15:34:21,681 | INFO     | could have reported an average CPU frequency of 3451 MHz (8 samples)
[2026-04-04 11:34:53] 2026-04-04 15:34:21,681 | INFO     | ..............................
[2026-04-04 11:34:53] 2026-04-04 15:34:21,681 | INFO     | . Timing measurements:
[2026-04-04 11:34:53] 2026-04-04 15:34:21,681 | INFO     | . get job = 0 s
[2026-04-04 11:34:53] 2026-04-04 15:34:21,681 | INFO     | . initial setup = 5 s
[2026-04-04 11:34:53] 2026-04-04 15:34:21,681 | INFO     | . payload setup = 5 s
[2026-04-04 11:34:53] 2026-04-04 15:34:21,681 | INFO     | . stage-in = 0 s
[2026-04-04 11:34:53] 2026-04-04 15:34:21,682 | INFO     | . payload execution = 8146 s
[2026-04-04 11:34:53] 2026-04-04 15:34:21,682 | INFO     | . stage-out = 0 s
[2026-04-04 11:34:53] 2026-04-04 15:34:21,682 | INFO     | . log creation = 0 s
[2026-04-04 11:34:53] 2026-04-04 15:34:21,682 | INFO     | ..............................
[2026-04-04 11:34:53] 2026-04-04 15:34:21,753 | INFO     | 
[2026-04-04 11:34:53] 2026-04-04 15:34:21,754 | INFO     | job summary report
[2026-04-04 11:34:53] 2026-04-04 15:34:21,754 | INFO     | --------------------------------------------------
[2026-04-04 11:34:53] 2026-04-04 15:34:21,754 | INFO     | PanDA job id: 7066814167
[2026-04-04 11:34:53] 2026-04-04 15:34:21,754 | INFO     | task id: 49263200
[2026-04-04 11:34:53] 2026-04-04 15:34:21,754 | INFO     | errors: (none)
[2026-04-04 11:34:53] 2026-04-04 15:34:21,754 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 11:34:53] 2026-04-04 15:34:21,754 | INFO     | pilot state: finished 
[2026-04-04 11:34:53] 2026-04-04 15:34:21,754 | INFO     | transexitcode: 0
[2026-04-04 11:34:53] 2026-04-04 15:34:21,754 | INFO     | exeerrorcode: 0
[2026-04-04 11:34:53] 2026-04-04 15:34:21,754 | INFO     | exeerrordiag: 
[2026-04-04 11:34:53] 2026-04-04 15:34:21,755 | INFO     | exitcode: 0
[2026-04-04 11:34:53] 2026-04-04 15:34:21,755 | INFO     | exitmsg: OK
[2026-04-04 11:34:53] 2026-04-04 15:34:21,755 | INFO     | cpuconsumptiontime: 31688 s
[2026-04-04 11:34:53] 2026-04-04 15:34:21,755 | INFO     | nevents: 400
[2026-04-04 11:34:53] 2026-04-04 15:34:21,755 | INFO     | neventsw: 0
[2026-04-04 11:34:53] 2026-04-04 15:34:21,755 | INFO     | pid: 3902706
[2026-04-04 11:34:53] 2026-04-04 15:34:21,755 | INFO     | pgrp: 3902706
[2026-04-04 11:34:53] 2026-04-04 15:34:21,755 | INFO     | corecount: 4
[2026-04-04 11:34:53] 2026-04-04 15:34:21,755 | INFO     | event service: False
[2026-04-04 11:34:53] 2026-04-04 15:34:21,755 | INFO     | sizes: {0: 2280260, 11: 2280260, 8155: 2308162, 8156: 2317188, 8159: 2317438}
[2026-04-04 11:34:53] 2026-04-04 15:34:21,755 | INFO     | --------------------------------------------------
[2026-04-04 11:34:53] 2026-04-04 15:34:21,755 | INFO     | 
[2026-04-04 11:34:53] 2026-04-04 15:34:21,756 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/4
[2026-04-04 11:34:53] 2026-04-04 15:34:21,768 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,768 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,769 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,769 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,769 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,769 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,769 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,769 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,769 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,769 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,769 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,769 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,769 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,770 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,770 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,770 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,770 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,770 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 11:34:53] 2026-04-04 15:34:21,770 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,770 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 11:34:53] 2026-04-04 15:34:21,770 | INFO     | job 7066814167 has completed (purged errors)
[2026-04-04 11:34:53] 2026-04-04 15:34:21,770 | INFO     | overall cleanup function is called
[2026-04-04 11:34:53] 2026-04-04 15:34:22,614 | WARNING  | process 3902706 can no longer be monitored (due to stat problems) - aborting
[2026-04-04 11:34:53] 2026-04-04 15:34:22,697 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 11:34:53] 2026-04-04 15:34:22,698 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-04-04 11:34:53] 2026-04-04 15:34:22,698 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-04 11:34:53] 2026-04-04 15:34:22,698 | WARNING  | maxPSS not found in memory monitor output
[2026-04-04 11:34:53] 2026-04-04 15:34:22,699 | INFO     | skipping file size check of payload stdout file (/home/whitlerd/Desktop/BOINC/slots/4/PanDA_Pilot-7066814167/payload.stdout) since it has not been created yet
[2026-04-04 11:34:53] 2026-04-04 15:34:22,699 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/4
[2026-04-04 11:34:53] 2026-04-04 15:34:22,708 | INFO     | sufficient remaining disk space (410753433600 B)
[2026-04-04 11:34:53] 2026-04-04 15:34:22,708 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-04 11:34:53] 2026-04-04 15:34:22,708 | INFO     | output file size check: skipping output file /home/whitlerd/Desktop/BOINC/slots/4/PanDA_Pilot-7066814167/HITS.49263200._001266.pool.root.1 since it does not exist
[2026-04-04 11:34:53] 2026-04-04 15:34:22,777 | INFO     | --- collectZombieJob: --- 10, [3902706]
[2026-04-04 11:34:53] 2026-04-04 15:34:22,777 | INFO     | zombie collector waiting for pid 3902706
[2026-04-04 11:34:53] 2026-04-04 15:34:22,777 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 11:34:53] 2026-04-04 15:34:22,777 | INFO     | collected zombie processes
[2026-04-04 11:34:53] 2026-04-04 15:34:22,777 | INFO     | will attempt to kill all subprocesses of pid=3902706
[2026-04-04 11:34:53] 2026-04-04 15:34:22,950 | INFO     | number of running child processes to parent process 3902706: 1
[2026-04-04 11:34:53] 2026-04-04 15:34:22,950 | INFO     | maximum number of monitored processes: 6
[2026-04-04 11:34:53] 2026-04-04 15:34:22,951 | INFO     | aborting job monitoring since job object (job id=7066814167) has expired
[2026-04-04 11:34:53] 2026-04-04 15:34:22,992 | INFO     | process IDs to be killed: [3902706] (in reverse order)
[2026-04-04 11:34:53] 2026-04-04 15:34:23,029 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 11:34:53] 2026-04-04 15:34:23,029 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 11:34:53] 2026-04-04 15:34:23,032 | INFO     | did not find any defunct processes belonging to 3902706
[2026-04-04 11:34:53] 2026-04-04 15:34:23,035 | INFO     | did not find any defunct processes belonging to 3902706
[2026-04-04 11:34:53] 2026-04-04 15:34:23,035 | INFO     | ready for new job
[2026-04-04 11:34:53] 2026-04-04 15:34:23,035 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-04 11:34:53] 2026-04-04 15:34:23,036 | INFO     | **************************************
[2026-04-04 11:34:53] 2026-04-04 15:34:23,036 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-04 11:34:53] 2026-04-04 15:34:23,036 | INFO     | **************************************
[2026-04-04 11:34:53] 2026-04-04 15:34:23,036 | INFO     | 
[2026-04-04 11:34:53] 2026-04-04 15:34:23,037 | INFO     | architecture information:
[2026-04-04 11:34:53] 2026-04-04 15:34:23,037 | INFO     | executing command: cat /etc/os-release
[2026-04-04 11:34:53] 2026-04-04 15:34:23,046 | INFO     | cat /etc/os-release:
[2026-04-04 11:34:53] NAME="CentOS Linux"
[2026-04-04 11:34:53] VERSION="7 (Core)"
[2026-04-04 11:34:53] ID="centos"
[2026-04-04 11:34:53] ID_LIKE="rhel fedora"
[2026-04-04 11:34:53] VERSION_ID="7"
[2026-04-04 11:34:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 11:34:53] ANSI_COLOR="0;31"
[2026-04-04 11:34:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 11:34:53] HOME_URL="https://www.centos.org/"
[2026-04-04 11:34:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 11:34:53] 
[2026-04-04 11:34:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 11:34:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 11:34:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 11:34:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 11:34:53] 
[2026-04-04 11:34:53] 2026-04-04 15:34:23,046 | INFO     | **************************************
[2026-04-04 11:34:53] 2026-04-04 15:34:23,549 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/4
[2026-04-04 11:34:53] 2026-04-04 15:34:23,558 | INFO     | sufficient remaining disk space (410754482176 B)
[2026-04-04 11:34:53] 2026-04-04 15:34:23,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 11:34:53] 2026-04-04 15:34:23,559 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 11:34:53] 2026-04-04 15:34:23,559 | INFO     | update_server=False
[2026-04-04 11:34:53] 2026-04-04 15:34:23,559 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-04 11:34:53] 2026-04-04 15:34:23,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 11:34:53] 2026-04-04 15:34:23,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 11:34:53] 2026-04-04 15:34:23,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 11:34:53] 2026-04-04 15:34:23,559 | INFO     | will abort loop
[2026-04-04 11:34:53] 2026-04-04 15:34:24,266 | INFO     | all data control threads have been joined
[2026-04-04 11:34:53] 2026-04-04 15:34:24,493 | INFO     | all job control threads have been joined
[2026-04-04 11:34:53] 2026-04-04 15:34:24,528 | INFO     | [monitor] cgroup control has ended
[2026-04-04 11:34:53] 2026-04-04 15:34:24,560 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 11:34:53] 2026-04-04 15:34:24,564 | INFO     | [job] queue monitor thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:24,564 | INFO     | [job] retrieve thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:24,565 | INFO     | [job] job monitor thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:24,710 | INFO     | [payload] failed_post thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:24,825 | INFO     | all payload control threads have been joined
[2026-04-04 11:34:53] 2026-04-04 15:34:25,220 | INFO     | [job] validate thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:25,271 | INFO     | [data] control thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:25,335 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:25,496 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:25,498 | INFO     | [job] control thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:25,533 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:25,817 | INFO     | [payload] validate_post thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:25,830 | INFO     | [payload] control thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:25,842 | INFO     | [data] copytool_in thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:26,565 | INFO     | [data] copytool_out thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:27,565 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:34,232 | INFO     | job.realtimelogging is not enabled
[2026-04-04 11:34:53] 2026-04-04 15:34:35,237 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 11:34:53] 2026-04-04 15:34:37,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129571105138496)>', '<ExcThread(monitor, started 129570598528768)>']
[2026-04-04 11:34:53] 2026-04-04 15:34:42,266 | INFO     | all workflow threads have been joined
[2026-04-04 11:34:53] 2026-04-04 15:34:42,266 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 11:34:53] 2026-04-04 15:34:42,266 | INFO     | traces error code: 0
[2026-04-04 11:34:53] 2026-04-04 15:34:42,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 11:34:53] 2026-04-04 15:34:53,514 | INFO     | PID=3898194 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-04 11:34:53] 2026-04-04 15:34:53,514 | INFO     | .. there are 3 such processes running
[2026-04-04 11:34:53] 2026-04-04 15:34:53,514 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 11:34:53] 2026-04-04 15:34:53,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 11:34:53] 2026-04-04 15:34:53,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 11:34:53] 2026-04-04 15:34:53,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 11:34:53] 2026-04-04 15:34:53,514 | INFO     | [monitor] control thread has ended
[2026-04-04 11:34:53] 2026-04-04 15:34:53,586 [wrapper] ==== pilot stdout END ====
[2026-04-04 11:34:53] 2026-04-04 15:34:53,589 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 11:34:53] 2026-04-04 15:34:53,591 [wrapper] pilotpid: 3898194
[2026-04-04 11:34:53] 2026-04-04 15:34:53,593 [wrapper] Pilot exit status: 0
[2026-04-04 11:34:53] 2026-04-04 15:34:53,600 [wrapper] pandaids: 7066814167
[2026-04-04 11:34:53] 2026-04-04 15:34:53,624 [wrapper] cleanup supervisor_pilot 3932453 3898195
[2026-04-04 11:34:53] 2026-04-04 15:34:53,626 [wrapper] Test setup, not cleaning
[2026-04-04 11:34:53] 2026-04-04 15:34:53,628 [wrapper] apfmon messages muted
[2026-04-04 11:34:53] 2026-04-04 15:34:53,629 [wrapper] ==== wrapper stdout END ====
[2026-04-04 11:34:53] 2026-04-04 15:34:53,631 [wrapper] ==== wrapper stderr END ====
[2026-04-04 11:34:53]  *** Error codes and diagnostics ***
[2026-04-04 11:34:53]     "exeErrorCode": 0,
[2026-04-04 11:34:53]     "exeErrorDiag": "",
[2026-04-04 11:34:53]     "pilotErrorCode": 0,
[2026-04-04 11:34:53]     "pilotErrorDiag": "",
[2026-04-04 11:34:53]  *** Listing of results directory ***
[2026-04-04 11:34:53] total 413528
[2026-04-04 11:34:53] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 29 07:16 pilot3.tar.gz
[2026-04-04 11:34:53] -rwx------ 1 whitlerd whitlerd     36322 Mar 29 07:20 runpilot2-wrapper.sh
[2026-04-04 11:34:53] -rw-r--r-- 1 whitlerd whitlerd      5118 Mar 29 07:22 queuedata.json
[2026-04-04 11:34:53] -rw-rw-r-- 1 whitlerd whitlerd       100 Apr  4 09:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 11:34:53] -rwxr-xr-x 1 whitlerd whitlerd      7986 Apr  4 09:17 run_atlas
[2026-04-04 11:34:53] -rw-rw-r-- 1 whitlerd whitlerd       105 Apr  4 09:17 job.xml
[2026-04-04 11:34:53] -rw-r--r-- 2 whitlerd whitlerd 222087029 Apr  4 09:17 EVNT.49263198._000051.pool.root.1
[2026-04-04 11:34:53] -rw-r--r-- 2 whitlerd whitlerd     15845 Apr  4 09:17 start_atlas.sh
[2026-04-04 11:34:53] drwxrwx--x 2 whitlerd whitlerd      4096 Apr  4 09:17 shared
[2026-04-04 11:34:53] -rw-r--r-- 2 whitlerd whitlerd    597541 Apr  4 09:17 input.tar.gz
[2026-04-04 11:34:53] -rw-rw-r-- 1 whitlerd whitlerd      6445 Apr  4 09:17 init_data.xml
[2026-04-04 11:34:53] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr  4 09:17 boinc_setup_complete
[2026-04-04 11:34:53] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr  4 09:17 boinc_lockfile
[2026-04-04 11:34:53] -rw-rw-r-- 1 whitlerd whitlerd      2572 Apr  4 09:17 pandaJob.out
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd   1005123 Apr  4 09:18 agis_schedconf.cvmfs.json
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd   1511579 Apr  4 09:18 agis_ddmendpoints.agis.ALL.json
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd       433 Apr  4 09:18 workernode_map.json
[2026-04-04 11:34:53] drwx------ 5 whitlerd whitlerd      4096 Apr  4 09:18 pilot3
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd 194375655 Apr  4 11:33 HITS.49263200._001266.pool.root.1
[2026-04-04 11:34:53] -rw-rw-r-- 1 whitlerd whitlerd       529 Apr  4 11:34 boinc_task_state.xml
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd      1028 Apr  4 11:34 memory_monitor_summary.json
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd        95 Apr  4 11:34 pilot_heartbeat.json
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd    321888 Apr  4 11:34 log.49263200._001266.job.log.tgz.1
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd      6362 Apr  4 11:34 heartbeat.json
[2026-04-04 11:34:53] -rw-rw-r-- 1 whitlerd whitlerd      8192 Apr  4 11:34 boinc_mmap_file
[2026-04-04 11:34:53] -rw-rw-r-- 1 whitlerd whitlerd        27 Apr  4 11:34 wrapper_checkpoint.txt
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd       822 Apr  4 11:34 pilotlog.txt
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd   1204308 Apr  4 11:34 log.49263200._001266.job.log.1
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd       357 Apr  4 11:34 output.list
[2026-04-04 11:34:53] -rw-rw-r-- 1 whitlerd whitlerd       620 Apr  4 11:34 runtime_log
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd   1546240 Apr  4 11:34 result.tar.gz
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd       658 Apr  4 11:34 wpNMDmMN3Q9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmrPKKDmSDo09n.diag
[2026-04-04 11:34:53] -rw-rw-r-- 1 whitlerd whitlerd      9054 Apr  4 11:34 runtime_log.err
[2026-04-04 11:34:53] -rw-rw-r-- 1 whitlerd whitlerd     21588 Apr  4 11:34 stderr.txt
[2026-04-04 11:34:53] HITS file was successfully produced:
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd 194375655 Apr  4 11:33 shared/HITS.pool.root.1
[2026-04-04 11:34:53]  *** Contents of shared directory: ***
[2026-04-04 11:34:53] total 408824
[2026-04-04 11:34:53] -rw-r--r-- 2 whitlerd whitlerd 222087029 Apr  4 09:17 ATLAS.root_0
[2026-04-04 11:34:53] -rw-r--r-- 2 whitlerd whitlerd     15845 Apr  4 09:17 start_atlas.sh
[2026-04-04 11:34:53] -rw-r--r-- 2 whitlerd whitlerd    597541 Apr  4 09:17 input.tar.gz
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd 194375655 Apr  4 11:33 HITS.pool.root.1
[2026-04-04 11:34:53] -rw------- 1 whitlerd whitlerd   1546240 Apr  4 11:34 result.tar.gz
11:34:55 (3894120): run_atlas exited; CPU time 31829.897468
11:34:55 (3894120): called boinc_finish(0)

</stderr_txt>
]]>

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