Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:03:48 (11419): wrapper (7.7.26015): starting
04:03:48 (11419): wrapper: running run_atlas (--nthreads 12)
[2026-04-04 04:03:48] Arguments: --nthreads 12
[2026-04-04 04:03:48] Threads: 12
[2026-04-04 04:03:48] Checking for CVMFS
[2026-04-04 04:03:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-04 04:03:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-04 04:03:48] Running cvmfs_config stat atlas.cern.ch
[2026-04-04 04:03:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-04 04:03:49] 2.11.2.0 2937 473177 102788 158069 1 1 14530155 20275200 1 130560 1 201374813 99.954 27014406 17629 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-04 04:03:49] CVMFS is ok
[2026-04-04 04:03:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-04 04:03:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-04 04:03:49] Further information can be found at the LHC@home message board.
[2026-04-04 04:03:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-04 04:03:49] Checking for apptainer binary...
[2026-04-04 04:03:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-04 04:03:49] Running /usr/bin/apptainer --version
[2026-04-04 04:03:49] apptainer version 1.3.2-1.el7
[2026-04-04 04:03:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-04 04:03:50] c-205-8.aglt2.org
[2026-04-04 04:03:50] apptainer works
[2026-04-04 04:03:50] Set ATHENA_PROC_NUMBER=12
[2026-04-04 04:03:50] Set ATHENA_CORE_NUMBER=12
[2026-04-04 04:03:50] Starting ATLAS job with PandaID=7071866201
[2026-04-04 04:03:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-04 06:47:35]  *** The last 200 lines of the pilot log: ***
[2026-04-04 06:47:35] 2026-04-04 10:46:27,854 | INFO     | intersect: -47794663495.309395
[2026-04-04 06:47:35] 2026-04-04 10:46:27,854 | INFO     | chi2: 1.543168985446456
[2026-04-04 06:47:35] 2026-04-04 10:46:27,854 | INFO     | sum of square deviations: 1132458442.5
[2026-04-04 06:47:35] 2026-04-04 10:46:27,855 | INFO     | sum of deviations: 32251909325.0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,855 | INFO     | mean x: 1775294552.5
[2026-04-04 06:47:35] 2026-04-04 10:46:27,855 | INFO     | mean y: 2659414.7792207794
[2026-04-04 06:47:35] 2026-04-04 10:46:27,856 | INFO     | intersect: -50556934459.58624
[2026-04-04 06:47:35] 2026-04-04 10:46:27,856 | INFO     | chi2: 1.544029137216714
[2026-04-04 06:47:35] 2026-04-04 10:46:27,856 | INFO     | current chi2=1.544029137216714 (change=-0.05573931166126619 %)
[2026-04-04 06:47:35] 2026-04-04 10:46:27,856 | INFO     | right removable region: 153
[2026-04-04 06:47:35] 2026-04-04 10:46:27,856 | INFO     | sum of square deviations: 1132458442.5
[2026-04-04 06:47:35] 2026-04-04 10:46:27,857 | INFO     | sum of deviations: 5623286037.0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,857 | INFO     | mean x: 1775294857.5
[2026-04-04 06:47:35] 2026-04-04 10:46:27,857 | INFO     | mean y: 2698081.4805194805
[2026-04-04 06:47:35] 2026-04-04 10:46:27,857 | INFO     | intersect: -8812628299.679514
[2026-04-04 06:47:35] 2026-04-04 10:46:27,858 | INFO     | chi2: 0.028480637138184065
[2026-04-04 06:47:35] 2026-04-04 10:46:27,858 | INFO     | current chi2=0.028480637138184065 (change=98.15440580994152 %)
[2026-04-04 06:47:35] 2026-04-04 10:46:27,858 | INFO     | sum of square deviations: 1025693650.0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,859 | INFO     | sum of deviations: 3781493211.9999995
[2026-04-04 06:47:35] 2026-04-04 10:46:27,859 | INFO     | mean x: 1775295010.0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,859 | INFO     | mean y: 2700641.389261745
[2026-04-04 06:47:35] 2026-04-04 10:46:27,859 | INFO     | intersect: -6542397916.657257
[2026-04-04 06:47:35] 2026-04-04 10:46:27,859 | INFO     | chi2: 0.0008726915805341573
[2026-04-04 06:47:35] 2026-04-04 10:46:27,859 | INFO     | current chi2=0.0008726915805341573 (change=96.9358424943235 %)
[2026-04-04 06:47:35] 2026-04-04 10:46:27,860 | INFO     | sum of square deviations: 925859220.0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,860 | INFO     | sum of deviations: 2801832053.0000005
[2026-04-04 06:47:35] 2026-04-04 10:46:27,860 | INFO     | mean x: 1775295162.5
[2026-04-04 06:47:35] 2026-04-04 10:46:27,861 | INFO     | mean y: 2702129.0416666665
[2026-04-04 06:47:35] 2026-04-04 10:46:27,861 | INFO     | intersect: -5369690112.003731
[2026-04-04 06:47:35] 2026-04-04 10:46:27,861 | INFO     | chi2: 0.00015935013443256648
[2026-04-04 06:47:35] 2026-04-04 10:46:27,861 | INFO     | current chi2=0.00015935013443256648 (change=81.74038366051023 %)
[2026-04-04 06:47:35] 2026-04-04 10:46:27,861 | INFO     | sum of square deviations: 832722590.0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,862 | INFO     | sum of deviations: 2316051538.000001
[2026-04-04 06:47:35] 2026-04-04 10:46:27,862 | INFO     | mean x: 1775295315.0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,862 | INFO     | mean y: 2702922.9136690646
[2026-04-04 06:47:35] 2026-04-04 10:46:27,862 | INFO     | intersect: -4934926359.738488
[2026-04-04 06:47:35] 2026-04-04 10:46:27,863 | INFO     | chi2: 8.632568581415095e-05
[2026-04-04 06:47:35] 2026-04-04 10:46:27,863 | INFO     | current chi2=8.632568581415095e-05 (change=45.82641168044818 %)
[2026-04-04 06:47:35] 2026-04-04 10:46:27,863 | INFO     | sum of square deviations: 746051197.5
[2026-04-04 06:47:35] 2026-04-04 10:46:27,864 | INFO     | sum of deviations: 2031040323.0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,864 | INFO     | mean x: 1775295467.5
[2026-04-04 06:47:35] 2026-04-04 10:46:27,864 | INFO     | mean y: 2703423.194029851
[2026-04-04 06:47:35] 2026-04-04 10:46:27,864 | INFO     | intersect: -4830338453.575608
[2026-04-04 06:47:35] 2026-04-04 10:46:27,864 | INFO     | chi2: 7.973871900661049e-05
[2026-04-04 06:47:35] 2026-04-04 10:46:27,864 | INFO     | current chi2=7.973871900661049e-05 (change=7.630367190735587 %)
[2026-04-04 06:47:35] 2026-04-04 10:46:27,864 | INFO     | left removable region: 50
[2026-04-04 06:47:35] 2026-04-04 10:46:27,865 | INFO     | sum of square deviations: 338804492.0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,865 | INFO     | sum of deviations: 898478760.0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,865 | INFO     | mean x: 1775296047.0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,865 | INFO     | mean y: 2704974.572815534
[2026-04-04 06:47:35] 2026-04-04 10:46:27,865 | INFO     | intersect: -4705219001.067572
[2026-04-04 06:47:35] 2026-04-04 10:46:27,866 | INFO     | chi2: 7.714162270584023e-05
[2026-04-04 06:47:35] 2026-04-04 10:46:27,866 | INFO     | current memory leak: 2.65 B/s (using 103 data points, chi2=0.00)
[2026-04-04 06:47:35] 2026-04-04 10:46:27,866 | INFO     | could have reported an average CPU frequency of 1684 MHz (9 samples)
[2026-04-04 06:47:35] 2026-04-04 10:46:27,866 | INFO     | ..............................
[2026-04-04 06:47:35] 2026-04-04 10:46:27,866 | INFO     | . Timing measurements:
[2026-04-04 06:47:35] 2026-04-04 10:46:27,866 | INFO     | . get job = 0 s
[2026-04-04 06:47:35] 2026-04-04 10:46:27,867 | INFO     | . initial setup = 7 s
[2026-04-04 06:47:35] 2026-04-04 10:46:27,867 | INFO     | . payload setup = 14 s
[2026-04-04 06:47:35] 2026-04-04 10:46:27,867 | INFO     | . stage-in = 0 s
[2026-04-04 06:47:35] 2026-04-04 10:46:27,867 | INFO     | . payload execution = 9697 s
[2026-04-04 06:47:35] 2026-04-04 10:46:27,867 | INFO     | . stage-out = 0 s
[2026-04-04 06:47:35] 2026-04-04 10:46:27,867 | INFO     | . log creation = 0 s
[2026-04-04 06:47:35] 2026-04-04 10:46:27,867 | INFO     | ..............................
[2026-04-04 06:47:35] 2026-04-04 10:46:27,965 | INFO     | 
[2026-04-04 06:47:35] 2026-04-04 10:46:27,965 | INFO     | job summary report
[2026-04-04 06:47:35] 2026-04-04 10:46:27,965 | INFO     | --------------------------------------------------
[2026-04-04 06:47:35] 2026-04-04 10:46:27,965 | INFO     | PanDA job id: 7071866201
[2026-04-04 06:47:35] 2026-04-04 10:46:27,966 | INFO     | task id: 49176616
[2026-04-04 06:47:35] 2026-04-04 10:46:27,966 | INFO     | errors: (none)
[2026-04-04 06:47:35] 2026-04-04 10:46:27,966 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-04 06:47:35] 2026-04-04 10:46:27,966 | INFO     | pilot state: finished 
[2026-04-04 06:47:35] 2026-04-04 10:46:27,966 | INFO     | transexitcode: 0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,966 | INFO     | exeerrorcode: 0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,967 | INFO     | exeerrordiag: 
[2026-04-04 06:47:35] 2026-04-04 10:46:27,967 | INFO     | exitcode: 0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,967 | INFO     | exitmsg: OK
[2026-04-04 06:47:35] 2026-04-04 10:46:27,967 | INFO     | cpuconsumptiontime: 108215 s
[2026-04-04 06:47:35] 2026-04-04 10:46:27,967 | INFO     | nevents: 400
[2026-04-04 06:47:35] 2026-04-04 10:46:27,967 | INFO     | neventsw: 0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,968 | INFO     | pid: 19928
[2026-04-04 06:47:35] 2026-04-04 10:46:27,968 | INFO     | pgrp: 19928
[2026-04-04 06:47:35] 2026-04-04 10:46:27,968 | INFO     | corecount: 12
[2026-04-04 06:47:35] 2026-04-04 10:46:27,968 | INFO     | event service: False
[2026-04-04 06:47:35] 2026-04-04 10:46:27,968 | INFO     | sizes: {0: 2280235, 11: 2280235, 9716: 2308798, 9718: 2317796, 9720: 2317852, 9722: 2318110}
[2026-04-04 06:47:35] 2026-04-04 10:46:27,968 | INFO     | --------------------------------------------------
[2026-04-04 06:47:35] 2026-04-04 10:46:27,968 | INFO     | 
[2026-04-04 06:47:35] 2026-04-04 10:46:27,968 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-04 06:47:35] 2026-04-04 10:46:27,992 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,992 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,992 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,992 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,993 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,993 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,993 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,993 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,993 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,993 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,994 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,994 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,994 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,994 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,994 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,994 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,995 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,995 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-04 06:47:35] 2026-04-04 10:46:27,995 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,995 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-04 06:47:35] 2026-04-04 10:46:27,995 | INFO     | job 7071866201 has completed (purged errors)
[2026-04-04 06:47:35] 2026-04-04 10:46:27,996 | INFO     | overall cleanup function is called
[2026-04-04 06:47:35] 2026-04-04 10:46:29,004 | INFO     | --- collectZombieJob: --- 10, [19928]
[2026-04-04 06:47:35] 2026-04-04 10:46:29,004 | INFO     | zombie collector waiting for pid 19928
[2026-04-04 06:47:35] 2026-04-04 10:46:29,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-04 06:47:35] 2026-04-04 10:46:29,004 | INFO     | collected zombie processes
[2026-04-04 06:47:35] 2026-04-04 10:46:29,005 | INFO     | will attempt to kill all subprocesses of pid=19928
[2026-04-04 06:47:35] 2026-04-04 10:46:29,092 | INFO     | process IDs to be killed: [19928] (in reverse order)
[2026-04-04 06:47:35] 2026-04-04 10:46:29,146 | WARNING  | found no corresponding commands to process id(s)
[2026-04-04 06:47:35] 2026-04-04 10:46:29,147 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-04 06:47:35] 2026-04-04 10:46:29,149 | INFO     | did not find any defunct processes belonging to 19928
[2026-04-04 06:47:35] 2026-04-04 10:46:29,152 | INFO     | did not find any defunct processes belonging to 19928
[2026-04-04 06:47:35] 2026-04-04 10:46:29,152 | INFO     | ready for new job
[2026-04-04 06:47:35] 2026-04-04 10:46:29,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-04 06:47:35] 2026-04-04 10:46:29,153 | INFO     | **************************************
[2026-04-04 06:47:35] 2026-04-04 10:46:29,153 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-04 06:47:35] 2026-04-04 10:46:29,153 | INFO     | **************************************
[2026-04-04 06:47:35] 2026-04-04 10:46:29,154 | INFO     | 
[2026-04-04 06:47:35] 2026-04-04 10:46:29,154 | INFO     | architecture information:
[2026-04-04 06:47:35] 2026-04-04 10:46:29,155 | INFO     | executing command: cat /etc/os-release
[2026-04-04 06:47:35] 2026-04-04 10:46:29,171 | INFO     | cat /etc/os-release:
[2026-04-04 06:47:35] NAME="CentOS Linux"
[2026-04-04 06:47:35] VERSION="7 (Core)"
[2026-04-04 06:47:35] ID="centos"
[2026-04-04 06:47:35] ID_LIKE="rhel fedora"
[2026-04-04 06:47:35] VERSION_ID="7"
[2026-04-04 06:47:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-04 06:47:35] ANSI_COLOR="0;31"
[2026-04-04 06:47:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-04 06:47:35] HOME_URL="https://www.centos.org/"
[2026-04-04 06:47:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-04 06:47:35] 
[2026-04-04 06:47:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-04 06:47:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-04 06:47:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-04 06:47:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-04 06:47:35] 
[2026-04-04 06:47:35] 2026-04-04 10:46:29,171 | INFO     | **************************************
[2026-04-04 06:47:35] 2026-04-04 10:46:29,674 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-04 06:47:35] 2026-04-04 10:46:29,691 | INFO     | sufficient remaining disk space (29232201728 B)
[2026-04-04 06:47:35] 2026-04-04 10:46:29,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-04 06:47:35] 2026-04-04 10:46:29,692 | INFO     | current server update state: UPDATING_FINAL
[2026-04-04 06:47:35] 2026-04-04 10:46:29,692 | INFO     | update_server=False
[2026-04-04 06:47:35] 2026-04-04 10:46:29,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-04 06:47:35] 2026-04-04 10:46:29,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-04 06:47:35] 2026-04-04 10:46:29,693 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-04 06:47:35] 2026-04-04 10:46:29,693 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-04 06:47:35] 2026-04-04 10:46:29,693 | INFO     | aborting loop
[2026-04-04 06:47:35] 2026-04-04 10:46:30,091 | INFO     | all data control threads have been joined
[2026-04-04 06:47:35] 2026-04-04 10:46:30,698 | INFO     | [job] retrieve thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:30,698 | INFO     | [job] queue monitor thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:30,699 | INFO     | [job] job monitor thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:30,758 | INFO     | all job control threads have been joined
[2026-04-04 06:47:35] 2026-04-04 10:46:30,952 | INFO     | [job] validate thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:30,975 | INFO     | [payload] validate_pre thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:30,975 | INFO     | [job] create_data_payload thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:31,096 | INFO     | [data] control thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:31,157 | INFO     | all payload control threads have been joined
[2026-04-04 06:47:35] 2026-04-04 10:46:31,172 | INFO     | [payload] validate_post thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:31,245 | INFO     | [data] copytool_in thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:31,699 | INFO     | [data] copytool_out thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:31,763 | INFO     | [job] control thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:31,810 | INFO     | [payload] execute_payloads thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:31,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-04 06:47:35] 2026-04-04 10:46:32,162 | INFO     | [payload] control thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:32,251 | INFO     | [payload] failed_post thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:35,882 | INFO     | [data] queue_monitor thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:40,371 | INFO     | job.realtimelogging is not enabled
[2026-04-04 06:47:35] 2026-04-04 10:46:41,376 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-04 06:47:35] 2026-04-04 10:46:59,213 | INFO     | 9742s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-04-04 06:47:35] 2026-04-04 10:47:00,330 | INFO     | PID=15537 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-04 06:47:35] 2026-04-04 10:47:00,330 | INFO     | found 0 job(s) in 20 queues
[2026-04-04 06:47:35] 2026-04-04 10:47:00,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-04 06:47:35] 2026-04-04 10:47:00,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-04 06:47:35] 2026-04-04 10:47:29,362 | INFO     | [monitor] cgroup control has ended
[2026-04-04 06:47:35] 2026-04-04 10:47:30,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139735815903040)>', '<ExcThread(monitor, started 139735502657280)>']
[2026-04-04 06:47:35] 2026-04-04 10:47:30,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-04 06:47:35] 2026-04-04 10:47:30,480 | INFO     | [monitor] control thread has ended
[2026-04-04 06:47:35] 2026-04-04 10:47:35,451 | INFO     | all workflow threads have been joined
[2026-04-04 06:47:35] 2026-04-04 10:47:35,451 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-04 06:47:35] 2026-04-04 10:47:35,452 | INFO     | traces error code: 0
[2026-04-04 06:47:35] 2026-04-04 10:47:35,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-04 06:47:35] 2026-04-04 10:47:35,545 [wrapper] ==== pilot stdout END ====
[2026-04-04 06:47:35] 2026-04-04 10:47:35,548 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-04 06:47:35] 2026-04-04 10:47:35,553 [wrapper] pilotpid: 15537
[2026-04-04 06:47:35] 2026-04-04 10:47:35,556 [wrapper] Pilot exit status: 0
[2026-04-04 06:47:35] 2026-04-04 10:47:35,571 [wrapper] pandaids: 7071866201
[2026-04-04 06:47:35] 2026-04-04 10:47:35,620 [wrapper] cleanup supervisor_pilot 27111 15538
[2026-04-04 06:47:35] 2026-04-04 10:47:35,624 [wrapper] Test setup, not cleaning
[2026-04-04 06:47:35] 2026-04-04 10:47:35,628 [wrapper] apfmon messages muted
[2026-04-04 06:47:35] 2026-04-04 10:47:35,633 [wrapper] ==== wrapper stdout END ====
[2026-04-04 06:47:35] 2026-04-04 10:47:35,637 [wrapper] ==== wrapper stderr END ====
[2026-04-04 06:47:35]  *** Error codes and diagnostics ***
[2026-04-04 06:47:35]     "exeErrorCode": 0,
[2026-04-04 06:47:35]     "exeErrorDiag": "",
[2026-04-04 06:47:35]     "pilotErrorCode": 0,
[2026-04-04 06:47:35]     "pilotErrorDiag": "",
[2026-04-04 06:47:35]  *** Listing of results directory ***
[2026-04-04 06:47:35] total 478628
[2026-04-04 06:47:35] -rwx------ 1 boincer umatlas     36322 Mar 28 01:39 runpilot2-wrapper.sh
[2026-04-04 06:47:35] -rw-r--r-- 1 boincer umatlas    585013 Mar 28 01:41 pilot3.tar.gz
[2026-04-04 06:47:35] -rw-r--r-- 1 boincer umatlas      5118 Mar 28 01:41 queuedata.json
[2026-04-04 06:47:35] -rw-r--r-- 1 boincer umatlas       100 Apr  4 04:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-04 06:47:35] -rwxr-xr-x 1 boincer umatlas      7986 Apr  4 04:03 run_atlas
[2026-04-04 06:47:35] -rw-r--r-- 1 boincer umatlas       105 Apr  4 04:03 job.xml
[2026-04-04 06:47:35] -rw-r--r-- 2 boincer umatlas 246034051 Apr  4 04:03 EVNT.49134569._000009.pool.root.1
[2026-04-04 06:47:35] -rw-r--r-- 2 boincer umatlas     15845 Apr  4 04:03 start_atlas.sh
[2026-04-04 06:47:35] drwxrwx--x 2 boincer umatlas      4096 Apr  4 04:03 shared
[2026-04-04 06:47:35] -rw-r--r-- 2 boincer umatlas    597563 Apr  4 04:03 input.tar.gz
[2026-04-04 06:47:35] -rw-r--r-- 1 boincer umatlas         0 Apr  4 04:03 boinc_lockfile
[2026-04-04 06:47:35] -rw-r--r-- 1 boincer umatlas      2604 Apr  4 04:03 pandaJob.out
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas        57 Apr  4 04:03 setup.sh.local
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas   1005165 Apr  4 04:04 agis_schedconf.cvmfs.json
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas   1511579 Apr  4 04:04 agis_ddmendpoints.agis.ALL.json
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas       433 Apr  4 04:04 workernode_map.json
[2026-04-04 06:47:35] drwx------ 5 boincer umatlas      4096 Apr  4 04:04 pilot3
[2026-04-04 06:47:35] -rw-r--r-- 1 boincer umatlas      5953 Apr  4 06:39 init_data.xml
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas 236493383 Apr  4 06:45 HITS.49176616._001442.pool.root.1
[2026-04-04 06:47:35] -rw-r--r-- 1 boincer umatlas       530 Apr  4 06:46 boinc_task_state.xml
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas      1050 Apr  4 06:46 memory_monitor_summary.json
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas        95 Apr  4 06:46 pilot_heartbeat.json
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas    461848 Apr  4 06:46 log.49176616._001442.job.log.tgz.1
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas      6404 Apr  4 06:46 heartbeat.json
[2026-04-04 06:47:35] -rw-r--r-- 1 boincer umatlas        28 Apr  4 06:47 wrapper_checkpoint.txt
[2026-04-04 06:47:35] -rw-r--r-- 1 boincer umatlas      8192 Apr  4 06:47 boinc_mmap_file
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas      4929 Apr  4 06:47 pilotlog.txt
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas   1366791 Apr  4 06:47 log.49176616._001442.job.log.1
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas       357 Apr  4 06:47 output.list
[2026-04-04 06:47:35] -rw-r--r-- 1 boincer umatlas       620 Apr  4 06:47 runtime_log
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas   1843200 Apr  4 06:47 result.tar.gz
[2026-04-04 06:47:35] -rw-r--r-- 1 boincer umatlas      9338 Apr  4 06:47 runtime_log.err
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas       662 Apr  4 06:47 13mMDmnZbQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmHFHKDmJ7gJcn.diag
[2026-04-04 06:47:35] -rw-r--r-- 1 boincer umatlas     20912 Apr  4 06:47 stderr.txt
[2026-04-04 06:47:35] HITS file was successfully produced:
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas 236493383 Apr  4 06:45 shared/HITS.pool.root.1
[2026-04-04 06:47:35]  *** Contents of shared directory: ***
[2026-04-04 06:47:35] total 473624
[2026-04-04 06:47:35] -rw-r--r-- 2 boincer umatlas 246034051 Apr  4 04:03 ATLAS.root_0
[2026-04-04 06:47:35] -rw-r--r-- 2 boincer umatlas     15845 Apr  4 04:03 start_atlas.sh
[2026-04-04 06:47:35] -rw-r--r-- 2 boincer umatlas    597563 Apr  4 04:03 input.tar.gz
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas 236493383 Apr  4 06:45 HITS.pool.root.1
[2026-04-04 06:47:35] -rw------- 1 boincer umatlas   1843200 Apr  4 06:47 result.tar.gz
06:47:36 (11419): run_atlas exited; CPU time 108212.832285
06:47:36 (11419): called boinc_finish(0)

</stderr_txt>
]]>

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