Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
22:16:59 (7500): wrapper (7.7.26015): starting
22:16:59 (7500): wrapper: running run_atlas (--nthreads 12)
[2026-04-03 22:16:59] Arguments: --nthreads 12
[2026-04-03 22:16:59] Threads: 12
[2026-04-03 22:16:59] Checking for CVMFS
[2026-04-03 22:17:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-03 22:17:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-03 22:17:03] Running cvmfs_config stat atlas.cern.ch
[2026-04-03 22:17:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-03 22:17:03] 2.13.0.0 7700 0 31760 158053 3 1 3983503 4096001 0 130560 0 0 0.000 1337 874 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-04-03 22:17:03] CVMFS is ok
[2026-04-03 22:17:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-03 22:17:03] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-03 22:17:03] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-03 22:17:03] Further information can be found at the LHC@home message board.
[2026-04-03 22:17:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-03 22:17:03] Checking for apptainer binary...
[2026-04-03 22:17:03] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin)
[2026-04-03 22:17:03] apptainer is not installed, using version from CVMFS
[2026-04-03 22:17:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-03 22:17:03] dagobert
[2026-04-03 22:17:03] apptainer works
[2026-04-03 22:17:03] Set ATHENA_PROC_NUMBER=12
[2026-04-03 22:17:03] Set ATHENA_CORE_NUMBER=12
[2026-04-03 22:17:03] Starting ATLAS job with PandaID=7058918322
[2026-04-03 22:17:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 23:25:28]  *** The last 200 lines of the pilot log: ***
[2026-04-03 23:25:28]  filetype=log
[2026-04-03 23:25:28]  guid=ea8eda47-0ed6-49ee-beea-6bd7fe5b2175
[2026-04-03 23:25:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-03 23:25:28]  is_altstaged=None
[2026-04-03 23:25:28]  is_tar=False
[2026-04-03 23:25:28]  lfn=log.49181154._000434.job.log.tgz.1
[2026-04-03 23:25:28]  mtime=0
[2026-04-03 23:25:28]  protocol_id=None
[2026-04-03 23:25:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-03 23:25:28]  replicas=None
[2026-04-03 23:25:28]  scope=mc23_13p6TeV
[2026-04-03 23:25:28]  status=None
[2026-04-03 23:25:28]  status_code=0
[2026-04-03 23:25:28]  storage_token=
[2026-04-03 23:25:28]  surl=/var/lib/boinc/slots/12/PanDA_Pilot-7058918322/log.49181154._000434.job.log.tgz.1
[2026-04-03 23:25:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/43/log.49181154._000434.job.log.tgz.1
[2026-04-03 23:25:28]  workdir=None
[2026-04-03 23:25:28] ]
[2026-04-03 23:25:28] 2026-04-03 21:24:53,626 | INFO     | transferring file log.49181154._000434.job.log.tgz.1 from /var/lib/boinc/slots/12/PanDA_Pilot-7058918322/log.49181154._000434.job.log.tgz.1 to /var/lib/boinc/slots
[2026-04-03 23:25:28] 2026-04-03 21:24:53,626 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/12/PanDA_Pilot-7058918322/log.49181154._000434.job.log.tgz.1 /var/lib/boinc/slots/12/log.49181154._000434.j
[2026-04-03 23:25:28] 2026-04-03 21:24:53,634 | INFO     | adding to output.list: log.49181154._000434.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/43/log.49181154._000434.job.log.tg
[2026-04-03 23:25:28] 2026-04-03 21:24:53,635 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-03 23:25:28] 2026-04-03 21:24:53,635 | INFO     | summary of transferred files:
[2026-04-03 23:25:28] 2026-04-03 21:24:53,635 | INFO     |  -- lfn=log.49181154._000434.job.log.tgz.1, status_code=0, status=transferred
[2026-04-03 23:25:28] 2026-04-03 21:24:53,635 | INFO     | stage-out finished correctly
[2026-04-03 23:25:28] 2026-04-03 21:24:55,169 | INFO     | time since job start (4061s) is within the limit (345600.0s)
[2026-04-03 23:25:28] 2026-04-03 21:24:56,484 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-03 23:25:28] 2026-04-03 21:24:56,967 | INFO     | job 7058918322 has state=finished
[2026-04-03 23:25:28] 2026-04-03 21:24:56,968 | INFO     | preparing for final server update for job 7058918322 in state='finished'
[2026-04-03 23:25:28] 2026-04-03 21:24:56,968 | INFO     | reading metadata from: /var/lib/boinc/slots/12/PanDA_Pilot-7058918322/jobReport.json
[2026-04-03 23:25:28] 2026-04-03 21:24:56,969 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/12/workernode_map.json
[2026-04-03 23:25:28] 2026-04-03 21:24:56,969 | INFO     | this job has now completed (state=finished)
[2026-04-03 23:25:28] 2026-04-03 21:24:56,969 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-03 23:25:28] 2026-04-03 21:24:56,969 | INFO     | log transfer has been attempted: DONE
[2026-04-03 23:25:28] 2026-04-03 21:24:56,969 | INFO     | job 7058918322 has finished - writing final server update
[2026-04-03 23:25:28] 2026-04-03 21:24:56,969 | INFO     | total number of processed events: 400 (read)
[2026-04-03 23:25:28] 2026-04-03 21:24:56,970 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-7058918322/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 23:25:28] 2026-04-03 21:24:56,971 | INFO     | extracted standard info from prmon json
[2026-04-03 23:25:28] 2026-04-03 21:24:56,971 | INFO     | extracted standard memory fields from prmon json
[2026-04-03 23:25:28] 2026-04-03 21:24:56,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-03 23:25:28] 2026-04-03 21:24:56,971 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-03 23:25:28] 2026-04-03 21:24:56,971 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | fitting pss+swap vs Time
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | sum of square deviations: 66959395.0
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | sum of deviations: -3111635986.0
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | mean x: 1775249554.5
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | mean y: 3161548.7666666666
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | intersect: 82499880611.307
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | chi2: 0.08494552066178426
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | current memory leak: -46.47 B/s (using 60 data points, chi2=0.08)
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | could have reported an average CPU frequency of 3147 MHz (6 samples)
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | ..............................
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | . Timing measurements:
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | . get job = 0 s
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | . initial setup = 2 s
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | . payload setup = 3 s
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | . stage-in = 0 s
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | . payload execution = 4040 s
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | . stage-out = 0 s
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | . log creation = 0 s
[2026-04-03 23:25:28] 2026-04-03 21:24:56,972 | INFO     | ..............................
[2026-04-03 23:25:28] 2026-04-03 21:24:56,993 | INFO     | 
[2026-04-03 23:25:28] 2026-04-03 21:24:56,993 | INFO     | job summary report
[2026-04-03 23:25:28] 2026-04-03 21:24:56,993 | INFO     | --------------------------------------------------
[2026-04-03 23:25:28] 2026-04-03 21:24:56,993 | INFO     | PanDA job id: 7058918322
[2026-04-03 23:25:28] 2026-04-03 21:24:56,993 | INFO     | task id: 49181154
[2026-04-03 23:25:28] 2026-04-03 21:24:56,993 | INFO     | errors: (none)
[2026-04-03 23:25:28] 2026-04-03 21:24:56,993 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 23:25:28] 2026-04-03 21:24:56,993 | INFO     | pilot state: finished 
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | transexitcode: 0
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | exeerrorcode: 0
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | exeerrordiag: 
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | exitcode: 0
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | exitmsg: OK
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | cpuconsumptiontime: 46262 s
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | nevents: 400
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | neventsw: 0
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | pid: 16384
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | pgrp: 16384
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | corecount: 12
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | event service: False
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | sizes: {0: 2280170, 11: 2280170, 4047: 2306173, 4048: 2315173, 4051: 2315229, 4052: 2315423}
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | --------------------------------------------------
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | 
[2026-04-03 23:25:28] 2026-04-03 21:24:56,994 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-04-03 23:25:28] 2026-04-03 21:24:57,002 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,002 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,002 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | job 7058918322 has completed (purged errors)
[2026-04-03 23:25:28] 2026-04-03 21:24:57,003 | INFO     | overall cleanup function is called
[2026-04-03 23:25:28] 2026-04-03 21:24:58,010 | INFO     | --- collectZombieJob: --- 10, [16384]
[2026-04-03 23:25:28] 2026-04-03 21:24:58,010 | INFO     | zombie collector waiting for pid 16384
[2026-04-03 23:25:28] 2026-04-03 21:24:58,010 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 23:25:28] 2026-04-03 21:24:58,010 | INFO     | collected zombie processes
[2026-04-03 23:25:28] 2026-04-03 21:24:58,010 | INFO     | will attempt to kill all subprocesses of pid=16384
[2026-04-03 23:25:28] 2026-04-03 21:24:58,034 | INFO     | process IDs to be killed: [16384] (in reverse order)
[2026-04-03 23:25:28] 2026-04-03 21:24:58,052 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 23:25:28] 2026-04-03 21:24:58,052 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 23:25:28] 2026-04-03 21:24:58,054 | INFO     | did not find any defunct processes belonging to 16384
[2026-04-03 23:25:28] 2026-04-03 21:24:58,055 | INFO     | did not find any defunct processes belonging to 16384
[2026-04-03 23:25:28] 2026-04-03 21:24:58,055 | INFO     | ready for new job
[2026-04-03 23:25:28] 2026-04-03 21:24:58,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-03 23:25:28] 2026-04-03 21:24:58,056 | INFO     | **************************************
[2026-04-03 23:25:28] 2026-04-03 21:24:58,056 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-03 23:25:28] 2026-04-03 21:24:58,056 | INFO     | **************************************
[2026-04-03 23:25:28] 2026-04-03 21:24:58,056 | INFO     | 
[2026-04-03 23:25:28] 2026-04-03 21:24:58,056 | INFO     | architecture information:
[2026-04-03 23:25:28] 2026-04-03 21:24:58,056 | INFO     | executing command: cat /etc/os-release
[2026-04-03 23:25:28] 2026-04-03 21:24:58,062 | INFO     | cat /etc/os-release:
[2026-04-03 23:25:28] NAME="CentOS Linux"
[2026-04-03 23:25:28] VERSION="7 (Core)"
[2026-04-03 23:25:28] ID="centos"
[2026-04-03 23:25:28] ID_LIKE="rhel fedora"
[2026-04-03 23:25:28] VERSION_ID="7"
[2026-04-03 23:25:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 23:25:28] ANSI_COLOR="0;31"
[2026-04-03 23:25:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 23:25:28] HOME_URL="https://www.centos.org/"
[2026-04-03 23:25:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 23:25:28] 
[2026-04-03 23:25:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 23:25:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 23:25:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 23:25:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 23:25:28] 
[2026-04-03 23:25:28] 2026-04-03 21:24:58,062 | INFO     | **************************************
[2026-04-03 23:25:28] 2026-04-03 21:24:58,564 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-04-03 23:25:28] 2026-04-03 21:24:58,573 | INFO     | sufficient remaining disk space (122803978240 B)
[2026-04-03 23:25:28] 2026-04-03 21:24:58,573 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 23:25:28] 2026-04-03 21:24:58,573 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 23:25:28] 2026-04-03 21:24:58,573 | INFO     | update_server=False
[2026-04-03 23:25:28] 2026-04-03 21:24:58,573 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-03 23:25:28] 2026-04-03 21:24:58,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 23:25:28] 2026-04-03 21:24:58,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 23:25:28] 2026-04-03 21:24:58,583 | WARNING  | process 16384 can no longer be monitored (due to stat problems) - aborting
[2026-04-03 23:25:28] 2026-04-03 21:24:58,600 | INFO     | using path: /var/lib/boinc/slots/12/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 23:25:28] 2026-04-03 21:24:58,621 | INFO     | number of running child processes to parent process 16384: 1
[2026-04-03 23:25:28] 2026-04-03 21:24:58,621 | INFO     | maximum number of monitored processes: 6
[2026-04-03 23:25:28] 2026-04-03 21:24:58,621 | INFO     | aborting job monitoring since job object (job id=7058918322) has expired
[2026-04-03 23:25:28] 2026-04-03 21:24:58,621 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 23:25:28] 2026-04-03 21:24:58,621 | INFO     | will abort loop
[2026-04-03 23:25:28] 2026-04-03 21:24:58,767 | INFO     | all payload control threads have been joined
[2026-04-03 23:25:28] 2026-04-03 21:24:58,828 | INFO     | all data control threads have been joined
[2026-04-03 23:25:28] 2026-04-03 21:24:59,167 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 23:25:28] 2026-04-03 21:24:59,575 | INFO     | [job] queue monitor thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:24:59,578 | INFO     | [job] retrieve thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:24:59,585 | INFO     | [data] copytool_in thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:24:59,589 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:24:59,626 | INFO     | [job] job monitor thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:24:59,642 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:24:59,773 | INFO     | [payload] control thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:24:59,803 | INFO     | [payload] validate_post thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:24:59,834 | INFO     | [data] control thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:24:59,961 | INFO     | all job control threads have been joined
[2026-04-03 23:25:28] 2026-04-03 21:25:00,103 | INFO     | [payload] failed_post thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:25:00,356 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:25:00,788 | INFO     | [job] validate thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:25:00,881 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:25:00,965 | INFO     | [job] control thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:25:01,173 | INFO     | [data] copytool_out thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:25:02,580 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 23:25:28] 2026-04-03 21:25:20,548 | INFO     | [monitor] cgroup control has ended
[2026-04-03 23:25:28] 2026-04-03 21:25:22,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140564517046080)>', '<ExcThread(monitor, started 140563516999424)>']
[2026-04-03 23:25:28] 2026-04-03 21:25:27,634 | INFO     | all workflow threads have been joined
[2026-04-03 23:25:28] 2026-04-03 21:25:27,634 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 23:25:28] 2026-04-03 21:25:27,634 | INFO     | traces error code: 0
[2026-04-03 23:25:28] 2026-04-03 21:25:27,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 23:25:28] 2026-04-03 21:25:28,230 | INFO     | PID=11881 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-03 23:25:28] 2026-04-03 21:25:28,230 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 23:25:28] 2026-04-03 21:25:28,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 23:25:28] 2026-04-03 21:25:28,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 23:25:28] 2026-04-03 21:25:28,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 23:25:28] 2026-04-03 21:25:28,230 | INFO     | [monitor] control thread has ended
[2026-04-03 23:25:28] 2026-04-03 21:25:28,266 [wrapper] ==== pilot stdout END ====
[2026-04-03 23:25:28] 2026-04-03 21:25:28,267 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 23:25:28] 2026-04-03 21:25:28,268 [wrapper] pilotpid: 11881
[2026-04-03 23:25:28] 2026-04-03 21:25:28,269 [wrapper] Pilot exit status: 0
[2026-04-03 23:25:28] 2026-04-03 21:25:28,274 [wrapper] pandaids: 7058918322
[2026-04-03 23:25:28] 2026-04-03 21:25:28,285 [wrapper] cleanup supervisor_pilot 21274 11882
[2026-04-03 23:25:28] 2026-04-03 21:25:28,286 [wrapper] Test setup, not cleaning
[2026-04-03 23:25:28] 2026-04-03 21:25:28,287 [wrapper] apfmon messages muted
[2026-04-03 23:25:28] 2026-04-03 21:25:28,288 [wrapper] ==== wrapper stdout END ====
[2026-04-03 23:25:28] 2026-04-03 21:25:28,290 [wrapper] ==== wrapper stderr END ====
[2026-04-03 23:25:28]  *** Error codes and diagnostics ***
[2026-04-03 23:25:28]     "exeErrorCode": 0,
[2026-04-03 23:25:28]     "exeErrorDiag": "",
[2026-04-03 23:25:28]     "pilotErrorCode": 0,
[2026-04-03 23:25:28]     "pilotErrorDiag": "",
[2026-04-03 23:25:28]  *** Listing of results directory ***
[2026-04-03 23:25:28] total 481816
[2026-04-03 23:25:28] -rw-r--r-- 1 boinc boinc    585013 Mar 18 14:20 pilot3.tar.gz
[2026-04-03 23:25:28] -rwx------ 1 boinc boinc     36322 Mar 18 14:21 runpilot2-wrapper.sh
[2026-04-03 23:25:28] -rw-r--r-- 1 boinc boinc      5111 Mar 18 14:22 queuedata.json
[2026-04-03 23:25:28] -rw-r--r-- 1 boinc boinc       100 Apr  3 22:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 23:25:28] -rwxr-xr-x 1 boinc boinc      7986 Apr  3 22:16 run_atlas
[2026-04-03 23:25:28] -rw-r--r-- 1 boinc boinc       105 Apr  3 22:16 job.xml
[2026-04-03 23:25:28] -rw-r--r-- 2 boinc boinc     15845 Apr  3 22:16 start_atlas.sh
[2026-04-03 23:25:28] drwxrwx--x 2 boinc boinc      4096 Apr  3 22:16 shared
[2026-04-03 23:25:28] -rw-r--r-- 2 boinc boinc    597548 Apr  3 22:16 input.tar.gz
[2026-04-03 23:25:28] -rw-r--r-- 1 boinc boinc      7168 Apr  3 22:16 init_data.xml
[2026-04-03 23:25:28] -rw-r--r-- 2 boinc boinc 244895107 Apr  3 22:16 EVNT.49134557._000021.pool.root.1
[2026-04-03 23:25:28] -rw-r--r-- 1 boinc boinc         0 Apr  3 22:16 boinc_lockfile
[2026-04-03 23:25:28] -rw-r--r-- 1 boinc boinc      2594 Apr  3 22:17 pandaJob.out
[2026-04-03 23:25:28] -rw------- 1 boinc boinc   1005173 Apr  3 22:17 agis_schedconf.cvmfs.json
[2026-04-03 23:25:28] -rw------- 1 boinc boinc   1511579 Apr  3 22:17 agis_ddmendpoints.agis.ALL.json
[2026-04-03 23:25:28] -rw------- 1 boinc boinc       421 Apr  3 22:17 workernode_map.json
[2026-04-03 23:25:28] drwx------ 5 boinc boinc      4096 Apr  3 22:17 pilot3
[2026-04-03 23:25:28] -rw-r--r-- 1 boinc boinc       529 Apr  3 23:24 boinc_task_state.xml
[2026-04-03 23:25:28] -rw------- 1 boinc boinc 242623368 Apr  3 23:24 HITS.49181154._000434.pool.root.1
[2026-04-03 23:25:28] -rw------- 1 boinc boinc      1003 Apr  3 23:24 memory_monitor_summary.json
[2026-04-03 23:25:28] -rw------- 1 boinc boinc        95 Apr  3 23:24 pilot_heartbeat.json
[2026-04-03 23:25:28] -rw------- 1 boinc boinc    361233 Apr  3 23:24 log.49181154._000434.job.log.tgz.1
[2026-04-03 23:25:28] -rw------- 1 boinc boinc      6262 Apr  3 23:24 heartbeat.json
[2026-04-03 23:25:28] -rw-r--r-- 1 boinc boinc      8192 Apr  3 23:25 boinc_mmap_file
[2026-04-03 23:25:28] -rw-r--r-- 1 boinc boinc        27 Apr  3 23:25 wrapper_checkpoint.txt
[2026-04-03 23:25:28] -rw------- 1 boinc boinc       745 Apr  3 23:25 pilotlog.txt
[2026-04-03 23:25:28] -rw------- 1 boinc boinc    601741 Apr  3 23:25 log.49181154._000434.job.log.1
[2026-04-03 23:25:28] -rw------- 1 boinc boinc       357 Apr  3 23:25 output.list
[2026-04-03 23:25:28] -rw-r--r-- 1 boinc boinc       620 Apr  3 23:25 runtime_log
[2026-04-03 23:25:28] -rw------- 1 boinc boinc    983040 Apr  3 23:25 result.tar.gz
[2026-04-03 23:25:28] -rw------- 1 boinc boinc       641 Apr  3 23:25 zzMODm405M9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfA2LDmJyYbfm.diag
[2026-04-03 23:25:28] -rw-r--r-- 1 boinc boinc      8781 Apr  3 23:25 runtime_log.err
[2026-04-03 23:25:28] -rw-r--r-- 1 boinc boinc     21464 Apr  3 23:25 stderr.txt
[2026-04-03 23:25:28] HITS file was successfully produced:
[2026-04-03 23:25:28] -rw------- 1 boinc boinc 242623368 Apr  3 23:24 shared/HITS.pool.root.1
[2026-04-03 23:25:28]  *** Contents of shared directory: ***
[2026-04-03 23:25:28] total 477664
[2026-04-03 23:25:28] -rw-r--r-- 2 boinc boinc     15845 Apr  3 22:16 start_atlas.sh
[2026-04-03 23:25:28] -rw-r--r-- 2 boinc boinc    597548 Apr  3 22:16 input.tar.gz
[2026-04-03 23:25:28] -rw-r--r-- 2 boinc boinc 244895107 Apr  3 22:16 ATLAS.root_0
[2026-04-03 23:25:28] -rw------- 1 boinc boinc 242623368 Apr  3 23:24 HITS.pool.root.1
[2026-04-03 23:25:28] -rw------- 1 boinc boinc    983040 Apr  3 23:25 result.tar.gz
23:25:29 (7500): run_atlas exited; CPU time 46280.532760
23:25:29 (7500): called boinc_finish(0)

</stderr_txt>
]]>

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