Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:33:31 (2375045): wrapper (7.7.26015): starting
23:33:31 (2375045): wrapper: running run_atlas (--nthreads 8)
[2026-04-02 23:33:31] Arguments: --nthreads 8
[2026-04-02 23:33:31] Threads: 8
[2026-04-02 23:33:31] Checking for CVMFS
[2026-04-02 23:33:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-02 23:33:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-02 23:33:31] Running cvmfs_config stat atlas.cern.ch
[2026-04-02 23:33:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-02 23:33:32] 2.13.3.0 7100 213772 275164 158026 0 716 37395853 40960001 41804 16776704 0 2401468842 99.756 1617622329 46061 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-02 23:33:32] CVMFS is ok
[2026-04-02 23:33:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-02 23:33:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-02 23:33:32] Further information can be found at the LHC@home message board.
[2026-04-02 23:33:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-02 23:33:32] Checking for apptainer binary...
[2026-04-02 23:33:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-02 23:33:32] Running /usr/bin/apptainer --version
[2026-04-02 23:33:32] apptainer version 1.4.5-2.el9
[2026-04-02 23:33:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-02 23:33:32] c8-6-10.aglt2.org
[2026-04-02 23:33:32] apptainer works
[2026-04-02 23:33:32] Set ATHENA_PROC_NUMBER=8
[2026-04-02 23:33:32] Set ATHENA_CORE_NUMBER=8
[2026-04-02 23:33:32] Starting ATLAS job with PandaID=7065844778
[2026-04-02 23:33:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 00:34:26]  *** The last 200 lines of the pilot log: ***
[2026-04-03 00:34:26]  protocol_id=None
[2026-04-03 00:34:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-03 00:34:26]  replicas=None
[2026-04-03 00:34:26]  scope=mc23_13p6TeV
[2026-04-03 00:34:26]  status=None
[2026-04-03 00:34:26]  status_code=0
[2026-04-03 00:34:26]  storage_token=
[2026-04-03 00:34:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7065844778/log.48967102._004809.job.log.tgz.1
[2026-04-03 00:34:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/a7/log.48967102._004809.job.log.tgz.1
[2026-04-03 00:34:26]  workdir=None
[2026-04-03 00:34:26] ]
[2026-04-03 00:34:26] 2026-04-03 04:33:47,578 | INFO     | transferring file log.48967102._004809.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7065844778/log.48967102._004809.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-04-03 00:34:26] 2026-04-03 04:33:47,578 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7065844778/log.48967102._004809.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967102._004809.job
[2026-04-03 00:34:26] 2026-04-03 04:33:47,593 | INFO     | adding to output.list: log.48967102._004809.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/a7/log.48967102._004809.job.log.tg
[2026-04-03 00:34:26] 2026-04-03 04:33:47,593 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-03 00:34:26] 2026-04-03 04:33:47,593 | INFO     | summary of transferred files:
[2026-04-03 00:34:26] 2026-04-03 04:33:47,593 | INFO     |  -- lfn=log.48967102._004809.job.log.tgz.1, status_code=0, status=transferred
[2026-04-03 00:34:26] 2026-04-03 04:33:47,594 | INFO     | stage-out finished correctly
[2026-04-03 00:34:26] 2026-04-03 04:33:49,481 | INFO     | time since job start (3585s) is within the limit (345600.0s)
[2026-04-03 00:34:26] 2026-04-03 04:33:50,649 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-04-03 00:34:26] 2026-04-03 04:33:50,823 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-03 00:34:26] 2026-04-03 04:33:51,138 | INFO     | PID=2378974 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-03 00:34:26] 2026-04-03 04:33:51,138 | INFO     | .. there are 45 such processes running
[2026-04-03 00:34:26] 2026-04-03 04:33:52,139 | INFO     | time since job start (3588s) is within the limit (345600.0s)
[2026-04-03 00:34:26] 2026-04-03 04:33:52,852 | INFO     | job 7065844778 has state=finished
[2026-04-03 00:34:26] 2026-04-03 04:33:52,852 | INFO     | preparing for final server update for job 7065844778 in state='finished'
[2026-04-03 00:34:26] 2026-04-03 04:33:52,934 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-03 00:34:26] 2026-04-03 04:33:52,934 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7065844778/jobReport.json
[2026-04-03 00:34:26] 2026-04-03 04:33:52,936 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-03 00:34:26] 2026-04-03 04:33:52,936 | INFO     | this job has now completed (state=finished)
[2026-04-03 00:34:26] 2026-04-03 04:33:52,936 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-03 00:34:26] 2026-04-03 04:33:52,936 | INFO     | log transfer has been attempted: DONE
[2026-04-03 00:34:26] 2026-04-03 04:33:52,936 | INFO     | job 7065844778 has finished - writing final server update
[2026-04-03 00:34:26] 2026-04-03 04:33:52,937 | INFO     | total number of processed events: 400 (read)
[2026-04-03 00:34:26] 2026-04-03 04:33:52,951 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7065844778/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 00:34:26] 2026-04-03 04:33:52,951 | INFO     | extracted standard info from prmon json
[2026-04-03 00:34:26] 2026-04-03 04:33:52,951 | INFO     | extracted standard memory fields from prmon json
[2026-04-03 00:34:26] 2026-04-03 04:33:52,951 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-03 00:34:26] 2026-04-03 04:33:52,952 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-03 00:34:26] 2026-04-03 04:33:52,952 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-03 00:34:26] 2026-04-03 04:33:52,953 | INFO     | fitting pss+swap vs Time
[2026-04-03 00:34:26] 2026-04-03 04:33:52,953 | INFO     | sum of square deviations: 43584073.0
[2026-04-03 00:34:26] 2026-04-03 04:33:52,953 | INFO     | sum of deviations: -8017651815.000001
[2026-04-03 00:34:26] 2026-04-03 04:33:52,953 | INFO     | mean x: 1775189138.5
[2026-04-03 00:34:26] 2026-04-03 04:33:52,953 | INFO     | mean y: 2791479.1153846155
[2026-04-03 00:34:26] 2026-04-03 04:33:52,953 | INFO     | intersect: 326563561012.1237
[2026-04-03 00:34:26] 2026-04-03 04:33:52,953 | INFO     | chi2: 0.08678772828331649
[2026-04-03 00:34:26] 2026-04-03 04:33:52,953 | INFO     | current memory leak: -183.96 B/s (using 52 data points, chi2=0.09)
[2026-04-03 00:34:26] 2026-04-03 04:33:52,954 | INFO     | could have reported an average CPU frequency of 3781 MHz (5 samples)
[2026-04-03 00:34:26] 2026-04-03 04:33:52,954 | INFO     | ..............................
[2026-04-03 00:34:26] 2026-04-03 04:33:52,954 | INFO     | . Timing measurements:
[2026-04-03 00:34:26] 2026-04-03 04:33:52,954 | INFO     | . get job = 0 s
[2026-04-03 00:34:26] 2026-04-03 04:33:52,954 | INFO     | . initial setup = 12 s
[2026-04-03 00:34:26] 2026-04-03 04:33:52,954 | INFO     | . payload setup = 15 s
[2026-04-03 00:34:26] 2026-04-03 04:33:52,954 | INFO     | . stage-in = 0 s
[2026-04-03 00:34:26] 2026-04-03 04:33:52,954 | INFO     | . payload execution = 3554 s
[2026-04-03 00:34:26] 2026-04-03 04:33:52,954 | INFO     | . stage-out = 0 s
[2026-04-03 00:34:26] 2026-04-03 04:33:52,954 | INFO     | . log creation = 0 s
[2026-04-03 00:34:26] 2026-04-03 04:33:52,954 | INFO     | ..............................
[2026-04-03 00:34:26] 2026-04-03 04:33:53,374 | INFO     | 
[2026-04-03 00:34:26] 2026-04-03 04:33:53,378 | INFO     | job summary report
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | --------------------------------------------------
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | PanDA job id: 7065844778
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | task id: 48967102
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | errors: (none)
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | pilot state: finished 
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | transexitcode: 0
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | exeerrorcode: 0
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | exeerrordiag: 
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | exitcode: 0
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | exitmsg: OK
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | cpuconsumptiontime: 25893 s
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | nevents: 400
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | neventsw: 0
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | pid: 2385727
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | pgrp: 2385727
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | corecount: 8
[2026-04-03 00:34:26] 2026-04-03 04:33:53,379 | INFO     | event service: False
[2026-04-03 00:34:26] 2026-04-03 04:33:53,380 | INFO     | sizes: {0: 2279767, 1: 2280284, 11: 2280284, 3570: 2305906, 3571: 2305905, 3573: 2314959, 3576: 2315143, 3578: 2315369}
[2026-04-03 00:34:26] 2026-04-03 04:33:53,380 | INFO     | --------------------------------------------------
[2026-04-03 00:34:26] 2026-04-03 04:33:53,380 | INFO     | 
[2026-04-03 00:34:26] 2026-04-03 04:33:53,380 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-03 00:34:26] 2026-04-03 04:33:53,393 | WARNING  | process 2385727 can no longer be monitored (due to stat problems) - aborting
[2026-04-03 00:34:26] 2026-04-03 04:33:53,393 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7065844778/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,400 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 00:34:26] 2026-04-03 04:33:53,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,400 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 00:34:26] 2026-04-03 04:33:53,400 | INFO     | job 7065844778 has completed (purged errors)
[2026-04-03 00:34:26] 2026-04-03 04:33:53,400 | INFO     | overall cleanup function is called
[2026-04-03 00:34:26] 2026-04-03 04:33:53,860 | INFO     | number of running child processes to parent process 2385727: 1
[2026-04-03 00:34:26] 2026-04-03 04:33:53,860 | INFO     | maximum number of monitored processes: 6
[2026-04-03 00:34:26] 2026-04-03 04:33:53,860 | INFO     | aborting job monitoring since job object (job id=7065844778) has expired
[2026-04-03 00:34:26] 2026-04-03 04:33:54,417 | INFO     | --- collectZombieJob: --- 10, [2385727]
[2026-04-03 00:34:26] 2026-04-03 04:33:54,417 | INFO     | zombie collector waiting for pid 2385727
[2026-04-03 00:34:26] 2026-04-03 04:33:54,417 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 00:34:26] 2026-04-03 04:33:54,417 | INFO     | collected zombie processes
[2026-04-03 00:34:26] 2026-04-03 04:33:54,417 | INFO     | will attempt to kill all subprocesses of pid=2385727
[2026-04-03 00:34:26] 2026-04-03 04:33:54,869 | INFO     | process IDs to be killed: [2385727] (in reverse order)
[2026-04-03 00:34:26] 2026-04-03 04:33:55,048 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 00:34:26] 2026-04-03 04:33:55,048 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 00:34:26] 2026-04-03 04:33:55,077 | INFO     | did not find any defunct processes belonging to 2385727
[2026-04-03 00:34:26] 2026-04-03 04:33:55,103 | INFO     | did not find any defunct processes belonging to 2385727
[2026-04-03 00:34:26] 2026-04-03 04:33:55,104 | INFO     | ready for new job
[2026-04-03 00:34:26] 2026-04-03 04:33:55,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-03 00:34:26] 2026-04-03 04:33:55,105 | INFO     | **************************************
[2026-04-03 00:34:26] 2026-04-03 04:33:55,105 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-03 00:34:26] 2026-04-03 04:33:55,105 | INFO     | **************************************
[2026-04-03 00:34:26] 2026-04-03 04:33:55,105 | INFO     | 
[2026-04-03 00:34:26] 2026-04-03 04:33:55,110 | INFO     | architecture information:
[2026-04-03 00:34:26] 2026-04-03 04:33:55,110 | INFO     | executing command: cat /etc/os-release
[2026-04-03 00:34:26] 2026-04-03 04:33:55,127 | INFO     | cat /etc/os-release:
[2026-04-03 00:34:26] NAME="CentOS Linux"
[2026-04-03 00:34:26] VERSION="7 (Core)"
[2026-04-03 00:34:26] ID="centos"
[2026-04-03 00:34:26] ID_LIKE="rhel fedora"
[2026-04-03 00:34:26] VERSION_ID="7"
[2026-04-03 00:34:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 00:34:26] ANSI_COLOR="0;31"
[2026-04-03 00:34:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 00:34:26] HOME_URL="https://www.centos.org/"
[2026-04-03 00:34:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 00:34:26] 
[2026-04-03 00:34:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 00:34:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 00:34:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 00:34:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 00:34:26] 
[2026-04-03 00:34:26] 2026-04-03 04:33:55,127 | INFO     | **************************************
[2026-04-03 00:34:26] 2026-04-03 04:33:55,629 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-03 00:34:26] 2026-04-03 04:33:55,645 | INFO     | sufficient remaining disk space (173682982912 B)
[2026-04-03 00:34:26] 2026-04-03 04:33:55,645 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 00:34:26] 2026-04-03 04:33:55,645 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 00:34:26] 2026-04-03 04:33:55,645 | INFO     | update_server=False
[2026-04-03 00:34:26] 2026-04-03 04:33:55,645 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-03 00:34:26] 2026-04-03 04:33:55,646 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 00:34:26] 2026-04-03 04:33:55,646 | INFO     | aborting loop
[2026-04-03 00:34:26] 2026-04-03 04:33:55,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 00:34:26] 2026-04-03 04:33:55,696 | INFO     | all data control threads have been joined
[2026-04-03 00:34:26] 2026-04-03 04:33:55,809 | INFO     | all job control threads have been joined
[2026-04-03 00:34:26] 2026-04-03 04:33:56,457 | INFO     | all payload control threads have been joined
[2026-04-03 00:34:26] 2026-04-03 04:33:56,651 | INFO     | [job] retrieve thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:33:56,651 | INFO     | [job] job monitor thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:33:56,702 | INFO     | [data] control thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:33:56,814 | INFO     | [job] control thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:33:56,818 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:33:56,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 00:34:26] 2026-04-03 04:33:56,914 | INFO     | [data] copytool_in thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:33:56,932 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:33:56,948 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:33:56,986 | INFO     | [job] validate thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:33:57,463 | INFO     | [payload] control thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:33:57,665 | INFO     | [data] copytool_out thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:33:57,691 | INFO     | [payload] validate_post thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:33:57,946 | INFO     | [payload] failed_post thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:33:58,013 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 00:34:26] 2026-04-03 04:33:59,013 | INFO     | [job] queue monitor thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:34:00,891 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:34:06,641 | INFO     | job.realtimelogging is not enabled
[2026-04-03 00:34:26] 2026-04-03 04:34:07,647 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 00:34:26] 2026-04-03 04:34:09,664 | INFO     | [monitor] cgroup control has ended
[2026-04-03 00:34:26] 2026-04-03 04:34:11,086 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140449049917248)>', '<ExcThread(monitor, started 140448551122688)>']
[2026-04-03 00:34:26] 2026-04-03 04:34:16,112 | INFO     | all workflow threads have been joined
[2026-04-03 00:34:26] 2026-04-03 04:34:16,112 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 00:34:26] 2026-04-03 04:34:16,112 | INFO     | traces error code: 0
[2026-04-03 00:34:26] 2026-04-03 04:34:16,112 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 00:34:26] 2026-04-03 04:34:25,795 | INFO     | PID=2378974 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-03 00:34:26] 2026-04-03 04:34:25,796 | INFO     | .. there are 45 such processes running
[2026-04-03 00:34:26] 2026-04-03 04:34:25,796 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 00:34:26] 2026-04-03 04:34:25,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 00:34:26] 2026-04-03 04:34:25,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 00:34:26] 2026-04-03 04:34:25,796 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 00:34:26] 2026-04-03 04:34:25,796 | INFO     | [monitor] control thread has ended
[2026-04-03 00:34:26] 2026-04-03 04:34:26,045 [wrapper] ==== pilot stdout END ====
[2026-04-03 00:34:26] 2026-04-03 04:34:26,047 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 00:34:26] 2026-04-03 04:34:26,050 [wrapper] pilotpid: 2378974
[2026-04-03 00:34:26] 2026-04-03 04:34:26,052 [wrapper] Pilot exit status: 0
[2026-04-03 00:34:26] 2026-04-03 04:34:26,081 [wrapper] pandaids: 7065844778
[2026-04-03 00:34:26] 2026-04-03 04:34:26,211 [wrapper] cleanup supervisor_pilot 3317156 2378975
[2026-04-03 00:34:26] 2026-04-03 04:34:26,214 [wrapper] Test setup, not cleaning
[2026-04-03 00:34:26] 2026-04-03 04:34:26,216 [wrapper] apfmon messages muted
[2026-04-03 00:34:26] 2026-04-03 04:34:26,221 [wrapper] ==== wrapper stdout END ====
[2026-04-03 00:34:26] 2026-04-03 04:34:26,224 [wrapper] ==== wrapper stderr END ====
[2026-04-03 00:34:26]  *** Error codes and diagnostics ***
[2026-04-03 00:34:26]     "exeErrorCode": 0,
[2026-04-03 00:34:26]     "exeErrorDiag": "",
[2026-04-03 00:34:26]     "pilotErrorCode": 0,
[2026-04-03 00:34:26]     "pilotErrorDiag": "",
[2026-04-03 00:34:26]  *** Listing of results directory ***
[2026-04-03 00:34:26] total 408616
[2026-04-03 00:34:26] -rw-r--r--. 1 boincer umatlas    585013 Mar 28 11:51 pilot3.tar.gz
[2026-04-03 00:34:26] -rwx------. 1 boincer umatlas     36322 Mar 28 11:55 runpilot2-wrapper.sh
[2026-04-03 00:34:26] -rw-r--r--. 1 boincer umatlas      5118 Mar 28 11:56 queuedata.json
[2026-04-03 00:34:26] -rw-r--r--. 1 boincer umatlas       100 Apr  2 23:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 00:34:26] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  2 23:33 run_atlas
[2026-04-03 00:34:26] -rw-r--r--. 1 boincer umatlas       105 Apr  2 23:33 job.xml
[2026-04-03 00:34:26] -rw-r--r--. 2 boincer umatlas 213669154 Apr  2 23:33 EVNT.48967100._000188.pool.root.1
[2026-04-03 00:34:26] -rw-r--r--. 2 boincer umatlas     15845 Apr  2 23:33 start_atlas.sh
[2026-04-03 00:34:26] drwxrwx--x. 2 boincer umatlas      4096 Apr  2 23:33 shared
[2026-04-03 00:34:26] -rw-r--r--. 2 boincer umatlas    597532 Apr  2 23:33 input.tar.gz
[2026-04-03 00:34:26] -rw-r--r--. 1 boincer umatlas         0 Apr  2 23:33 boinc_lockfile
[2026-04-03 00:34:26] -rw-r--r--. 1 boincer umatlas      2579 Apr  2 23:33 pandaJob.out
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas        57 Apr  2 23:33 setup.sh.local
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas   1005183 Apr  2 23:33 agis_schedconf.cvmfs.json
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas   1511579 Apr  2 23:33 agis_ddmendpoints.agis.ALL.json
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas       430 Apr  2 23:34 workernode_map.json
[2026-04-03 00:34:26] drwx------. 5 boincer umatlas      4096 Apr  2 23:34 pilot3
[2026-04-03 00:34:26] -rw-r--r--. 1 boincer umatlas      7170 Apr  3 00:30 init_data.xml
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas 199114889 Apr  3 00:33 HITS.48967102._004809.pool.root.1
[2026-04-03 00:34:26] -rw-r--r--. 1 boincer umatlas       529 Apr  3 00:33 boinc_task_state.xml
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas      1048 Apr  3 00:33 memory_monitor_summary.json
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas    312961 Apr  3 00:33 log.48967102._004809.job.log.tgz.1
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas      6371 Apr  3 00:33 heartbeat.json
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas       823 Apr  3 00:34 pilotlog.txt
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas        95 Apr  3 00:34 pilot_heartbeat.json
[2026-04-03 00:34:26] -rw-r--r--. 1 boincer umatlas      8192 Apr  3 00:34 boinc_mmap_file
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas    534689 Apr  3 00:34 log.48967102._004809.job.log.1
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas       357 Apr  3 00:34 output.list
[2026-04-03 00:34:26] -rw-r--r--. 1 boincer umatlas        27 Apr  3 00:34 wrapper_checkpoint.txt
[2026-04-03 00:34:26] -rw-r--r--. 1 boincer umatlas       620 Apr  3 00:34 runtime_log
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas    870400 Apr  3 00:34 result.tar.gz
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas       657 Apr  3 00:34 RzdNDmVBlQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmFRIKDmyT3I6n.diag
[2026-04-03 00:34:26] -rw-r--r--. 1 boincer umatlas      9336 Apr  3 00:34 runtime_log.err
[2026-04-03 00:34:26] -rw-r--r--. 1 boincer umatlas     21896 Apr  3 00:34 stderr.txt
[2026-04-03 00:34:26] HITS file was successfully produced:
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas 199114889 Apr  3 00:33 shared/HITS.pool.root.1
[2026-04-03 00:34:26]  *** Contents of shared directory: ***
[2026-04-03 00:34:26] total 404572
[2026-04-03 00:34:26] -rw-r--r--. 2 boincer umatlas 213669154 Apr  2 23:33 ATLAS.root_0
[2026-04-03 00:34:26] -rw-r--r--. 2 boincer umatlas     15845 Apr  2 23:33 start_atlas.sh
[2026-04-03 00:34:26] -rw-r--r--. 2 boincer umatlas    597532 Apr  2 23:33 input.tar.gz
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas 199114889 Apr  3 00:33 HITS.pool.root.1
[2026-04-03 00:34:26] -rw-------. 1 boincer umatlas    870400 Apr  3 00:34 result.tar.gz
00:34:28 (2375045): run_atlas exited; CPU time 26008.743674
00:34:28 (2375045): called boinc_finish(0)

</stderr_txt>
]]>

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