Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:27:40 (27928): wrapper (7.7.26015): starting
15:27:40 (27928): wrapper: running run_atlas (--nthreads 12)
[2026-04-02 15:27:40] Arguments: --nthreads 12
[2026-04-02 15:27:40] Threads: 12
[2026-04-02 15:27:40] Checking for CVMFS
[2026-04-02 15:27:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-02 15:27:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-02 15:27:40] Running cvmfs_config stat atlas.cern.ch
[2026-04-02 15:27:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-02 15:27:40] 2.11.2.0 2984 470935 93476 158013 1 1 11037213 20275201 1 130560 1 200967630 99.958 26055483 16814 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-02 15:27:40] CVMFS is ok
[2026-04-02 15:27:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-02 15:27:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-02 15:27:40] Further information can be found at the LHC@home message board.
[2026-04-02 15:27:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-02 15:27:40] Checking for apptainer binary...
[2026-04-02 15:27:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-02 15:27:40] Running /usr/bin/apptainer --version
[2026-04-02 15:27:40] apptainer version 1.3.2-1.el7
[2026-04-02 15:27:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-02 15:27:42] c-205-26.aglt2.org
[2026-04-02 15:27:42] apptainer works
[2026-04-02 15:27:42] Set ATHENA_PROC_NUMBER=12
[2026-04-02 15:27:42] Set ATHENA_CORE_NUMBER=12
[2026-04-02 15:27:42] Starting ATLAS job with PandaID=7065225587
[2026-04-02 15:27:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-02 18:14:27]  *** The last 200 lines of the pilot log: ***
[2026-04-02 18:14:27] 2026-04-02 22:13:35,510 | INFO     | extracted standard info from prmon json
[2026-04-02 18:14:27] 2026-04-02 22:13:35,510 | INFO     | extracted standard memory fields from prmon json
[2026-04-02 18:14:27] 2026-04-02 22:13:35,510 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-02 18:14:27] 2026-04-02 22:13:35,511 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-02 18:14:27] 2026-04-02 22:13:35,511 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-02 18:14:27] 2026-04-02 22:13:35,514 | INFO     | fitting pss+swap vs Time
[2026-04-02 18:14:27] 2026-04-02 22:13:35,514 | INFO     | sum of square deviations: 1342841922.0
[2026-04-02 18:14:27] 2026-04-02 22:13:35,515 | INFO     | sum of deviations: -10452588509.999998
[2026-04-02 18:14:27] 2026-04-02 22:13:35,515 | INFO     | mean x: 1775163057.0
[2026-04-02 18:14:27] 2026-04-02 22:13:35,515 | INFO     | mean y: 2703374.3496932513
[2026-04-02 18:14:27] 2026-04-02 22:13:35,515 | INFO     | intersect: 13820449654.819683
[2026-04-02 18:14:27] 2026-04-02 22:13:35,516 | INFO     | chi2: 2.4889664830274776
[2026-04-02 18:14:27] 2026-04-02 22:13:35,516 | INFO     | sum of square deviations: 1223016419.5
[2026-04-02 18:14:27] 2026-04-02 22:13:35,517 | INFO     | sum of deviations: 1745221498.4999948
[2026-04-02 18:14:27] 2026-04-02 22:13:35,517 | INFO     | mean x: 1775162904.5
[2026-04-02 18:14:27] 2026-04-02 22:13:35,517 | INFO     | mean y: 2718528.6139240507
[2026-04-02 18:14:27] 2026-04-02 22:13:35,517 | INFO     | intersect: -2530405650.9777575
[2026-04-02 18:14:27] 2026-04-02 22:13:35,517 | INFO     | chi2: 1.7138887706799568
[2026-04-02 18:14:27] 2026-04-02 22:13:35,518 | INFO     | current chi2=1.7138887706799568 (change=31.14054438389816 %)
[2026-04-02 18:14:27] 2026-04-02 22:13:35,518 | INFO     | sum of square deviations: 1110539892.0
[2026-04-02 18:14:27] 2026-04-02 22:13:35,519 | INFO     | sum of deviations: 1994811752.0000005
[2026-04-02 18:14:27] 2026-04-02 22:13:35,519 | INFO     | mean x: 1775162752.0
[2026-04-02 18:14:27] 2026-04-02 22:13:35,519 | INFO     | mean y: 2718867.2418300654
[2026-04-02 18:14:27] 2026-04-02 22:13:35,519 | INFO     | intersect: -3185924372.7817016
[2026-04-02 18:14:27] 2026-04-02 22:13:35,519 | INFO     | chi2: 1.714939307695557
[2026-04-02 18:14:27] 2026-04-02 22:13:35,519 | INFO     | current chi2=1.714939307695557 (change=-0.06129551891418383 %)
[2026-04-02 18:14:27] 2026-04-02 22:13:35,519 | INFO     | right removable region: 152
[2026-04-02 18:14:27] 2026-04-02 22:13:35,520 | INFO     | sum of square deviations: 1223016419.5
[2026-04-02 18:14:27] 2026-04-02 22:13:35,520 | INFO     | sum of deviations: -37456452413.5
[2026-04-02 18:14:27] 2026-04-02 22:13:35,521 | INFO     | mean x: 1775163209.5
[2026-04-02 18:14:27] 2026-04-02 22:13:35,521 | INFO     | mean y: 2737300.2215189873
[2026-04-02 18:14:27] 2026-04-02 22:13:35,521 | INFO     | intersect: 54369396016.06771
[2026-04-02 18:14:27] 2026-04-02 22:13:35,521 | INFO     | chi2: 1.0417408680430535
[2026-04-02 18:14:27] 2026-04-02 22:13:35,521 | INFO     | current chi2=1.0417408680430535 (change=58.14564498369933 %)
[2026-04-02 18:14:27] 2026-04-02 22:13:35,521 | INFO     | sum of square deviations: 1110539892.0
[2026-04-02 18:14:27] 2026-04-02 22:13:35,522 | INFO     | sum of deviations: -43102171536.00001
[2026-04-02 18:14:27] 2026-04-02 22:13:35,522 | INFO     | mean x: 1775163362.0
[2026-04-02 18:14:27] 2026-04-02 22:13:35,522 | INFO     | mean y: 2744883.385620915
[2026-04-02 18:14:27] 2026-04-02 22:13:35,522 | INFO     | intersect: 68900221042.97816
[2026-04-02 18:14:27] 2026-04-02 22:13:35,523 | INFO     | chi2: 0.9402705050037694
[2026-04-02 18:14:27] 2026-04-02 22:13:35,523 | INFO     | current chi2=0.9402705050037694 (change=9.740461006382493 %)
[2026-04-02 18:14:27] 2026-04-02 22:13:35,523 | INFO     | left removable region: 20
[2026-04-02 18:14:27] 2026-04-02 22:13:35,523 | INFO     | sum of square deviations: 713140813.0
[2026-04-02 18:14:27] 2026-04-02 22:13:35,524 | INFO     | sum of deviations: -22115169848.000008
[2026-04-02 18:14:27] 2026-04-02 22:13:35,524 | INFO     | mean x: 1775163331.5
[2026-04-02 18:14:27] 2026-04-02 22:13:35,524 | INFO     | mean y: 2752303.787878788
[2026-04-02 18:14:27] 2026-04-02 22:13:35,524 | INFO     | intersect: 55052243047.29977
[2026-04-02 18:14:27] 2026-04-02 22:13:35,524 | INFO     | chi2: 0.12321542392667696
[2026-04-02 18:14:27] 2026-04-02 22:13:35,525 | INFO     | current memory leak: -31.01 B/s (using 132 data points, chi2=0.12)
[2026-04-02 18:14:27] 2026-04-02 22:13:35,525 | INFO     | could have reported an average CPU frequency of 1784 MHz (9 samples)
[2026-04-02 18:14:27] 2026-04-02 22:13:35,525 | INFO     | ..............................
[2026-04-02 18:14:27] 2026-04-02 22:13:35,525 | INFO     | . Timing measurements:
[2026-04-02 18:14:27] 2026-04-02 22:13:35,525 | INFO     | . get job = 0 s
[2026-04-02 18:14:27] 2026-04-02 22:13:35,525 | INFO     | . initial setup = 8 s
[2026-04-02 18:14:27] 2026-04-02 22:13:35,525 | INFO     | . payload setup = 13 s
[2026-04-02 18:14:27] 2026-04-02 22:13:35,526 | INFO     | . stage-in = 0 s
[2026-04-02 18:14:27] 2026-04-02 22:13:35,526 | INFO     | . payload execution = 9900 s
[2026-04-02 18:14:27] 2026-04-02 22:13:35,526 | INFO     | . stage-out = 0 s
[2026-04-02 18:14:27] 2026-04-02 22:13:35,526 | INFO     | . log creation = 0 s
[2026-04-02 18:14:27] 2026-04-02 22:13:35,526 | INFO     | ..............................
[2026-04-02 18:14:27] 2026-04-02 22:13:35,838 | INFO     | 
[2026-04-02 18:14:27] 2026-04-02 22:13:35,839 | INFO     | job summary report
[2026-04-02 18:14:27] 2026-04-02 22:13:35,839 | INFO     | --------------------------------------------------
[2026-04-02 18:14:27] 2026-04-02 22:13:35,839 | INFO     | PanDA job id: 7065225587
[2026-04-02 18:14:27] 2026-04-02 22:13:35,839 | INFO     | task id: 49177049
[2026-04-02 18:14:27] 2026-04-02 22:13:35,839 | INFO     | errors: (none)
[2026-04-02 18:14:27] 2026-04-02 22:13:35,840 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-02 18:14:27] 2026-04-02 22:13:35,840 | INFO     | pilot state: finished 
[2026-04-02 18:14:27] 2026-04-02 22:13:35,840 | INFO     | transexitcode: 0
[2026-04-02 18:14:27] 2026-04-02 22:13:35,840 | INFO     | exeerrorcode: 0
[2026-04-02 18:14:27] 2026-04-02 22:13:35,840 | INFO     | exeerrordiag: 
[2026-04-02 18:14:27] 2026-04-02 22:13:35,840 | INFO     | exitcode: 0
[2026-04-02 18:14:27] 2026-04-02 22:13:35,840 | INFO     | exitmsg: OK
[2026-04-02 18:14:27] 2026-04-02 22:13:35,841 | INFO     | cpuconsumptiontime: 109183 s
[2026-04-02 18:14:27] 2026-04-02 22:13:35,841 | INFO     | nevents: 400
[2026-04-02 18:14:27] 2026-04-02 22:13:35,841 | INFO     | neventsw: 0
[2026-04-02 18:14:27] 2026-04-02 22:13:35,841 | INFO     | pid: 4098
[2026-04-02 18:14:27] 2026-04-02 22:13:35,841 | INFO     | pgrp: 4098
[2026-04-02 18:14:27] 2026-04-02 22:13:35,841 | INFO     | corecount: 12
[2026-04-02 18:14:27] 2026-04-02 22:13:35,842 | INFO     | event service: False
[2026-04-02 18:14:27] 2026-04-02 22:13:35,842 | INFO     | sizes: {0: 2280088, 1: 2280294, 11: 2280322, 9917: 2309010, 9918: 2318063, 9919: 2318449}
[2026-04-02 18:14:27] 2026-04-02 22:13:35,842 | INFO     | --------------------------------------------------
[2026-04-02 18:14:27] 2026-04-02 22:13:35,842 | INFO     | 
[2026-04-02 18:14:27] 2026-04-02 22:13:35,842 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-02 18:14:27] 2026-04-02 22:13:35,866 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,866 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,867 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,867 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,867 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,867 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,867 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,868 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,868 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,868 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,868 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,868 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,868 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,869 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,869 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-02 18:14:27] 2026-04-02 22:13:35,869 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,870 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-02 18:14:27] 2026-04-02 22:13:35,870 | INFO     | job 7065225587 has completed (purged errors)
[2026-04-02 18:14:27] 2026-04-02 22:13:35,870 | INFO     | overall cleanup function is called
[2026-04-02 18:14:27] 2026-04-02 22:13:36,878 | INFO     | --- collectZombieJob: --- 10, [4098]
[2026-04-02 18:14:27] 2026-04-02 22:13:36,879 | INFO     | zombie collector waiting for pid 4098
[2026-04-02 18:14:27] 2026-04-02 22:13:36,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-02 18:14:27] 2026-04-02 22:13:36,879 | INFO     | collected zombie processes
[2026-04-02 18:14:27] 2026-04-02 22:13:36,879 | INFO     | will attempt to kill all subprocesses of pid=4098
[2026-04-02 18:14:27] 2026-04-02 22:13:36,972 | INFO     | process IDs to be killed: [4098] (in reverse order)
[2026-04-02 18:14:27] 2026-04-02 22:13:37,032 | WARNING  | found no corresponding commands to process id(s)
[2026-04-02 18:14:27] 2026-04-02 22:13:37,033 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-02 18:14:27] 2026-04-02 22:13:37,036 | INFO     | did not find any defunct processes belonging to 4098
[2026-04-02 18:14:27] 2026-04-02 22:13:37,039 | INFO     | did not find any defunct processes belonging to 4098
[2026-04-02 18:14:27] 2026-04-02 22:13:37,039 | INFO     | ready for new job
[2026-04-02 18:14:27] 2026-04-02 22:13:37,039 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-02 18:14:27] 2026-04-02 22:13:37,041 | INFO     | **************************************
[2026-04-02 18:14:27] 2026-04-02 22:13:37,041 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-02 18:14:27] 2026-04-02 22:13:37,041 | INFO     | **************************************
[2026-04-02 18:14:27] 2026-04-02 22:13:37,041 | INFO     | 
[2026-04-02 18:14:27] 2026-04-02 22:13:37,042 | INFO     | architecture information:
[2026-04-02 18:14:27] 2026-04-02 22:13:37,042 | INFO     | executing command: cat /etc/os-release
[2026-04-02 18:14:27] 2026-04-02 22:13:37,058 | INFO     | cat /etc/os-release:
[2026-04-02 18:14:27] NAME="CentOS Linux"
[2026-04-02 18:14:27] VERSION="7 (Core)"
[2026-04-02 18:14:27] ID="centos"
[2026-04-02 18:14:27] ID_LIKE="rhel fedora"
[2026-04-02 18:14:27] VERSION_ID="7"
[2026-04-02 18:14:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-02 18:14:27] ANSI_COLOR="0;31"
[2026-04-02 18:14:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-02 18:14:27] HOME_URL="https://www.centos.org/"
[2026-04-02 18:14:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-02 18:14:27] 
[2026-04-02 18:14:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-02 18:14:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-02 18:14:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-02 18:14:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-02 18:14:27] 
[2026-04-02 18:14:27] 2026-04-02 22:13:37,059 | INFO     | **************************************
[2026-04-02 18:14:27] 2026-04-02 22:13:37,562 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-02 18:14:27] 2026-04-02 22:13:37,579 | INFO     | sufficient remaining disk space (29258416128 B)
[2026-04-02 18:14:27] 2026-04-02 22:13:37,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-02 18:14:27] 2026-04-02 22:13:37,579 | INFO     | current server update state: UPDATING_FINAL
[2026-04-02 18:14:27] 2026-04-02 22:13:37,580 | INFO     | update_server=False
[2026-04-02 18:14:27] 2026-04-02 22:13:37,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-02 18:14:27] 2026-04-02 22:13:37,580 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-02 18:14:27] 2026-04-02 22:13:37,580 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-02 18:14:27] 2026-04-02 22:13:37,801 | INFO     | all job control threads have been joined
[2026-04-02 18:14:27] 2026-04-02 22:13:38,097 | INFO     | all payload control threads have been joined
[2026-04-02 18:14:27] 2026-04-02 22:13:38,312 | INFO     | all data control threads have been joined
[2026-04-02 18:14:27] 2026-04-02 22:13:38,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-02 18:14:27] 2026-04-02 22:13:38,584 | INFO     | [job] retrieve thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:38,586 | INFO     | [job] queue monitor thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:38,636 | INFO     | [payload] validate_post thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:38,728 | INFO     | [payload] failed_post thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:38,805 | INFO     | [job] control thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:38,994 | INFO     | job.realtimelogging is not enabled
[2026-04-02 18:14:27] 2026-04-02 22:13:39,092 | WARNING  | process 4098 can no longer be monitored (due to stat problems) - aborting
[2026-04-02 18:14:27] 2026-04-02 22:13:39,102 | INFO     | [payload] control thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:39,136 | INFO     | [data] copytool_in thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:39,165 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-02 18:14:27] 2026-04-02 22:13:39,251 | INFO     | number of running child processes to parent process 4098: 1
[2026-04-02 18:14:27] 2026-04-02 22:13:39,251 | INFO     | maximum number of monitored processes: 6
[2026-04-02 18:14:27] 2026-04-02 22:13:39,258 | INFO     | aborting job monitoring since job object (job id=7065225587) has expired
[2026-04-02 18:14:27] 2026-04-02 22:13:39,258 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-02 18:14:27] 2026-04-02 22:13:39,258 | INFO     | will abort loop
[2026-04-02 18:14:27] 2026-04-02 22:13:39,318 | INFO     | [data] control thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:39,862 | INFO     | [payload] execute_payloads thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:39,902 | INFO     | [job] create_data_payload thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:39,920 | INFO     | [job] validate thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:40,000 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:40,051 | INFO     | [payload] validate_pre thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:40,264 | INFO     | [job] job monitor thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:40,354 | INFO     | [data] copytool_out thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:13:41,586 | INFO     | [data] queue_monitor thread has finished
[2026-04-02 18:14:27] 2026-04-02 22:14:07,769 | INFO     | PID=31943 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-02 18:14:27] 2026-04-02 22:14:07,770 | INFO     | found 0 job(s) in 20 queues
[2026-04-02 18:14:27] 2026-04-02 22:14:07,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-02 18:14:27] 2026-04-02 22:14:07,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-02 18:14:27] 2026-04-02 22:14:20,918 | INFO     | [monitor] cgroup control has ended
[2026-04-02 18:14:27] 2026-04-02 22:14:21,910 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831262074688)>', '<ExcThread(monitor, started 139830822422272)>']
[2026-04-02 18:14:27] 2026-04-02 22:14:22,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-02 18:14:27] 2026-04-02 22:14:22,833 | INFO     | [monitor] control thread has ended
[2026-04-02 18:14:27] 2026-04-02 22:14:26,935 | INFO     | all workflow threads have been joined
[2026-04-02 18:14:27] 2026-04-02 22:14:26,941 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-02 18:14:27] 2026-04-02 22:14:26,942 | INFO     | traces error code: 0
[2026-04-02 18:14:27] 2026-04-02 22:14:26,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-02 18:14:27] 2026-04-02 22:14:27,035 [wrapper] ==== pilot stdout END ====
[2026-04-02 18:14:27] 2026-04-02 22:14:27,039 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-02 18:14:27] 2026-04-02 22:14:27,043 [wrapper] pilotpid: 31943
[2026-04-02 18:14:27] 2026-04-02 22:14:27,047 [wrapper] Pilot exit status: 0
[2026-04-02 18:14:27] 2026-04-02 22:14:27,062 [wrapper] pandaids: 7065225587
[2026-04-02 18:14:27] 2026-04-02 22:14:27,103 [wrapper] cleanup supervisor_pilot 15398 31944
[2026-04-02 18:14:27] 2026-04-02 22:14:27,106 [wrapper] Test setup, not cleaning
[2026-04-02 18:14:27] 2026-04-02 22:14:27,110 [wrapper] apfmon messages muted
[2026-04-02 18:14:27] 2026-04-02 22:14:27,114 [wrapper] ==== wrapper stdout END ====
[2026-04-02 18:14:27] 2026-04-02 22:14:27,118 [wrapper] ==== wrapper stderr END ====
[2026-04-02 18:14:27]  *** Error codes and diagnostics ***
[2026-04-02 18:14:27]     "exeErrorCode": 0,
[2026-04-02 18:14:27]     "exeErrorDiag": "",
[2026-04-02 18:14:27]     "pilotErrorCode": 0,
[2026-04-02 18:14:27]     "pilotErrorDiag": "",
[2026-04-02 18:14:27]  *** Listing of results directory ***
[2026-04-02 18:14:27] total 464604
[2026-04-02 18:14:27] -rw-r--r-- 1 boincer umatlas    585013 Mar 25 11:16 pilot3.tar.gz
[2026-04-02 18:14:27] -rw-r--r-- 1 boincer umatlas      5111 Mar 25 11:16 queuedata.json
[2026-04-02 18:14:27] -rwx------ 1 boincer umatlas     36322 Mar 25 11:16 runpilot2-wrapper.sh
[2026-04-02 18:14:27] -rw-r--r-- 1 boincer umatlas       100 Apr  2 15:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-02 18:14:27] -rwxr-xr-x 1 boincer umatlas      7986 Apr  2 15:27 run_atlas
[2026-04-02 18:14:27] -rw-r--r-- 1 boincer umatlas       105 Apr  2 15:27 job.xml
[2026-04-02 18:14:27] -rw-r--r-- 2 boincer umatlas 234970198 Apr  2 15:27 EVNT.49136239._000005.pool.root.1
[2026-04-02 18:14:27] drwxrwx--x 2 boincer umatlas      4096 Apr  2 15:27 shared
[2026-04-02 18:14:27] -rw-r--r-- 2 boincer umatlas    597559 Apr  2 15:27 input.tar.gz
[2026-04-02 18:14:27] -rw-r--r-- 2 boincer umatlas     15845 Apr  2 15:27 start_atlas.sh
[2026-04-02 18:14:27] -rw-r--r-- 1 boincer umatlas         0 Apr  2 15:27 boinc_lockfile
[2026-04-02 18:14:27] -rw-r--r-- 1 boincer umatlas      2647 Apr  2 15:27 pandaJob.out
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas        57 Apr  2 15:27 setup.sh.local
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas   1005191 Apr  2 15:27 agis_schedconf.cvmfs.json
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas   1511579 Apr  2 15:27 agis_ddmendpoints.agis.ALL.json
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas       445 Apr  2 15:28 workernode_map.json
[2026-04-02 18:14:27] drwx------ 5 boincer umatlas      4096 Apr  2 15:28 pilot3
[2026-04-02 18:14:27] -rw-r--r-- 1 boincer umatlas      5954 Apr  2 18:11 init_data.xml
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas 233130839 Apr  2 18:13 HITS.49177049._000176.pool.root.1
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas        95 Apr  2 18:13 pilot_heartbeat.json
[2026-04-02 18:14:27] -rw-r--r-- 1 boincer umatlas       531 Apr  2 18:13 boinc_task_state.xml
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas      1062 Apr  2 18:13 memory_monitor_summary.json
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas    468408 Apr  2 18:13 log.49177049._000176.job.log.tgz.1
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas      6434 Apr  2 18:13 heartbeat.json
[2026-04-02 18:14:27] -rw-r--r-- 1 boincer umatlas        29 Apr  2 18:14 wrapper_checkpoint.txt
[2026-04-02 18:14:27] -rw-r--r-- 1 boincer umatlas      8192 Apr  2 18:14 boinc_mmap_file
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas      5329 Apr  2 18:14 pilotlog.txt
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas   1389584 Apr  2 18:14 log.49177049._000176.job.log.1
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas       357 Apr  2 18:14 output.list
[2026-04-02 18:14:27] -rw-r--r-- 1 boincer umatlas       620 Apr  2 18:14 runtime_log
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas   1873920 Apr  2 18:14 result.tar.gz
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas       665 Apr  2 18:14 UhFNDmk9eP9n9Rq4apOajLDm4fhM0noT9bVoINGKDmp4FKDmQxtjOn.diag
[2026-04-02 18:14:27] -rw-r--r-- 1 boincer umatlas      9344 Apr  2 18:14 runtime_log.err
[2026-04-02 18:14:27] -rw-r--r-- 1 boincer umatlas     21031 Apr  2 18:14 stderr.txt
[2026-04-02 18:14:27] HITS file was successfully produced:
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas 233130839 Apr  2 18:13 shared/HITS.pool.root.1
[2026-04-02 18:14:27]  *** Contents of shared directory: ***
[2026-04-02 18:14:27] total 459568
[2026-04-02 18:14:27] -rw-r--r-- 2 boincer umatlas 234970198 Apr  2 15:27 ATLAS.root_0
[2026-04-02 18:14:27] -rw-r--r-- 2 boincer umatlas    597559 Apr  2 15:27 input.tar.gz
[2026-04-02 18:14:27] -rw-r--r-- 2 boincer umatlas     15845 Apr  2 15:27 start_atlas.sh
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas 233130839 Apr  2 18:13 HITS.pool.root.1
[2026-04-02 18:14:27] -rw------- 1 boincer umatlas   1873920 Apr  2 18:14 result.tar.gz
18:14:28 (27928): run_atlas exited; CPU time 109095.798576
18:14:28 (27928): called boinc_finish(0)

</stderr_txt>
]]>

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