Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:17:25 (3829439): wrapper (7.7.26015): starting
15:17:25 (3829439): wrapper: running run_atlas (--nthreads 9)
[2026-04-02 15:17:25] Arguments: --nthreads 9
[2026-04-02 15:17:25] Threads: 9
[2026-04-02 15:17:25] Checking for CVMFS
[2026-04-02 15:17:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-02 15:17:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-02 15:17:26] Running cvmfs_config stat atlas.cern.ch
[2026-04-02 15:17:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-02 15:17:26] 2.13.3.0 1513861 82007 694008 158013 3 358 26305729 32935937 22125 16776704 0 313068251 99.585 399651036 30952 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-02 15:17:26] CVMFS is ok
[2026-04-02 15:17:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-02 15:17:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-02 15:17:26] Further information can be found at the LHC@home message board.
[2026-04-02 15:17:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-02 15:17:26] Checking for apptainer binary...
[2026-04-02 15:17:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-02 15:17:26] Running /usr/bin/apptainer --version
[2026-04-02 15:17:26] apptainer version 1.4.5-2.el9
[2026-04-02 15:17:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-02 15:17:27] c6-12-29-4.aglt2.org
[2026-04-02 15:17:27] apptainer works
[2026-04-02 15:17:27] Set ATHENA_PROC_NUMBER=9
[2026-04-02 15:17:27] Set ATHENA_CORE_NUMBER=9
[2026-04-02 15:17:27] Starting ATLAS job with PandaID=7057231663
[2026-04-02 15:17:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 00:16:02]  *** The last 200 lines of the pilot log: ***
[2026-04-03 00:16:02] 2026-04-03 04:15:07,177 | INFO     | preparing for final server update for job 7057231663 in state='finished'
[2026-04-03 00:16:02] 2026-04-03 04:15:07,365 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-03 00:16:02] 2026-04-03 04:15:07,366 | INFO     | reading metadata from: /tmp/boinchome/slots/4/PanDA_Pilot-7057231663/jobReport.json
[2026-04-03 00:16:02] 2026-04-03 04:15:07,381 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-04-03 00:16:02] 2026-04-03 04:15:07,382 | INFO     | this job has now completed (state=finished)
[2026-04-03 00:16:02] 2026-04-03 04:15:07,382 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-03 00:16:02] 2026-04-03 04:15:07,382 | INFO     | log transfer has been attempted: DONE
[2026-04-03 00:16:02] 2026-04-03 04:15:07,382 | INFO     | job 7057231663 has finished - writing final server update
[2026-04-03 00:16:02] 2026-04-03 04:15:07,382 | INFO     | total number of processed events: 400 (read)
[2026-04-03 00:16:02] 2026-04-03 04:15:07,400 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7057231663/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 00:16:02] 2026-04-03 04:15:07,401 | INFO     | extracted standard info from prmon json
[2026-04-03 00:16:02] 2026-04-03 04:15:07,401 | INFO     | extracted standard memory fields from prmon json
[2026-04-03 00:16:02] 2026-04-03 04:15:07,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-03 00:16:02] 2026-04-03 04:15:07,402 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-03 00:16:02] 2026-04-03 04:15:07,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-03 00:16:02] 2026-04-03 04:15:07,412 | INFO     | fitting pss+swap vs Time
[2026-04-03 00:16:02] 2026-04-03 04:15:07,413 | INFO     | sum of square deviations: 45125672056.448555
[2026-04-03 00:16:02] 2026-04-03 04:15:07,426 | INFO     | monitor loop #1981: job 0:7057231663 is in state 'finished'
[2026-04-03 00:16:02] 2026-04-03 04:15:07,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-03 00:16:02] 2026-04-03 04:15:07,427 | INFO     | sum of deviations: -35450123147.159645
[2026-04-03 00:16:02] 2026-04-03 04:15:07,428 | INFO     | mean x: 1775173670.6311786
[2026-04-03 00:16:02] 2026-04-03 04:15:07,428 | INFO     | mean y: 2585377.241444867
[2026-04-03 00:16:02] 2026-04-03 04:15:07,428 | INFO     | intersect: 1397138020.1971047
[2026-04-03 00:16:02] 2026-04-03 04:15:07,429 | INFO     | chi2: 3.816442044450274
[2026-04-03 00:16:02] 2026-04-03 04:15:07,429 | INFO     | sum of square deviations: 43850999433.86151
[2026-04-03 00:16:02] 2026-04-03 04:15:07,436 | INFO     | sum of deviations: -2005240193.1228657
[2026-04-03 00:16:02] 2026-04-03 04:15:07,436 | INFO     | mean x: 1775173518.1324377
[2026-04-03 00:16:02] 2026-04-03 04:15:07,436 | INFO     | mean y: 2589346.4510556622
[2026-04-03 00:16:02] 2026-04-03 04:15:07,436 | INFO     | intersect: 83765359.1824267
[2026-04-03 00:16:02] 2026-04-03 04:15:07,437 | INFO     | chi2: 3.1261570682005417
[2026-04-03 00:16:02] 2026-04-03 04:15:07,437 | INFO     | current chi2=3.1261570682005417 (change=18.08713372848197 %)
[2026-04-03 00:16:02] 2026-04-03 04:15:07,437 | INFO     | right removable region: 520
[2026-04-03 00:16:02] 2026-04-03 04:15:07,438 | INFO     | sum of square deviations: 43851021024.383995
[2026-04-03 00:16:02] 2026-04-03 04:15:07,444 | INFO     | sum of deviations: -167171273787.32822
[2026-04-03 00:16:02] 2026-04-03 04:15:07,444 | INFO     | mean x: 1775173823.128599
[2026-04-03 00:16:02] 2026-04-03 04:15:07,444 | INFO     | mean y: 2601100.9750479846
[2026-04-03 00:16:02] 2026-04-03 04:15:07,444 | INFO     | intersect: 6770016369.169432
[2026-04-03 00:16:02] 2026-04-03 04:15:07,445 | INFO     | chi2: 1.3543710622451488
[2026-04-03 00:16:02] 2026-04-03 04:15:07,445 | INFO     | current chi2=1.3543710622451488 (change=64.51220674988045 %)
[2026-04-03 00:16:02] 2026-04-03 04:15:07,446 | INFO     | sum of square deviations: 42600571836.55818
[2026-04-03 00:16:02] 2026-04-03 04:15:07,452 | INFO     | sum of deviations: -184251210989.37216
[2026-04-03 00:16:02] 2026-04-03 04:15:07,452 | INFO     | mean x: 1775173975.627907
[2026-04-03 00:16:02] 2026-04-03 04:15:07,452 | INFO     | mean y: 2603175.4980620155
[2026-04-03 00:16:02] 2026-04-03 04:15:07,452 | INFO     | intersect: 7680386374.773672
[2026-04-03 00:16:02] 2026-04-03 04:15:07,453 | INFO     | chi2: 1.2792568534669355
[2026-04-03 00:16:02] 2026-04-03 04:15:07,453 | INFO     | current chi2=1.2792568534669355 (change=5.546058305003655 %)
[2026-04-03 00:16:02] 2026-04-03 04:15:07,453 | INFO     | left removable region: 20
[2026-04-03 00:16:02] 2026-04-03 04:15:07,454 | INFO     | sum of square deviations: 38759279956.80805
[2026-04-03 00:16:02] 2026-04-03 04:15:07,460 | INFO     | sum of deviations: -127486854977.1477
[2026-04-03 00:16:02] 2026-04-03 04:15:07,460 | INFO     | mean x: 1775174097.628
[2026-04-03 00:16:02] 2026-04-03 04:15:07,460 | INFO     | mean y: 2604471.182
[2026-04-03 00:16:02] 2026-04-03 04:15:07,460 | INFO     | intersect: 5841499388.623272
[2026-04-03 00:16:02] 2026-04-03 04:15:07,461 | INFO     | chi2: 0.5292739273964412
[2026-04-03 00:16:02] 2026-04-03 04:15:07,461 | INFO     | current memory leak: -3.29 B/s (using 500 data points, chi2=0.53)
[2026-04-03 00:16:02] 2026-04-03 04:15:07,462 | INFO     | could have reported an average CPU frequency of 2637 MHz (21 samples)
[2026-04-03 00:16:02] 2026-04-03 04:15:07,463 | INFO     | ..............................
[2026-04-03 00:16:02] 2026-04-03 04:15:07,464 | INFO     | . Timing measurements:
[2026-04-03 00:16:02] 2026-04-03 04:15:07,464 | INFO     | . get job = 0 s
[2026-04-03 00:16:02] 2026-04-03 04:15:07,464 | INFO     | . initial setup = 32 s
[2026-04-03 00:16:02] 2026-04-03 04:15:07,464 | INFO     | . payload setup = 80 s
[2026-04-03 00:16:02] 2026-04-03 04:15:07,464 | INFO     | . stage-in = 0 s
[2026-04-03 00:16:02] 2026-04-03 04:15:07,464 | INFO     | . payload execution = 32063 s
[2026-04-03 00:16:02] 2026-04-03 04:15:07,464 | INFO     | . stage-out = 3 s
[2026-04-03 00:16:02] 2026-04-03 04:15:07,464 | INFO     | . log creation = 0 s
[2026-04-03 00:16:02] 2026-04-03 04:15:07,464 | INFO     | ..............................
[2026-04-03 00:16:02] 2026-04-03 04:15:07,815 | INFO     | 
[2026-04-03 00:16:02] 2026-04-03 04:15:07,817 | INFO     | job summary report
[2026-04-03 00:16:02] 2026-04-03 04:15:07,817 | INFO     | --------------------------------------------------
[2026-04-03 00:16:02] 2026-04-03 04:15:07,817 | INFO     | PanDA job id: 7057231663
[2026-04-03 00:16:02] 2026-04-03 04:15:07,817 | INFO     | task id: 49176822
[2026-04-03 00:16:02] 2026-04-03 04:15:07,817 | INFO     | errors: (none)
[2026-04-03 00:16:02] 2026-04-03 04:15:07,817 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 00:16:02] 2026-04-03 04:15:07,817 | INFO     | pilot state: finished 
[2026-04-03 00:16:02] 2026-04-03 04:15:07,817 | INFO     | transexitcode: 0
[2026-04-03 00:16:02] 2026-04-03 04:15:07,817 | INFO     | exeerrorcode: 0
[2026-04-03 00:16:02] 2026-04-03 04:15:07,817 | INFO     | exeerrordiag: 
[2026-04-03 00:16:02] 2026-04-03 04:15:07,817 | INFO     | exitcode: 0
[2026-04-03 00:16:02] 2026-04-03 04:15:07,818 | INFO     | exitmsg: OK
[2026-04-03 00:16:02] 2026-04-03 04:15:07,818 | INFO     | cpuconsumptiontime: 110296 s
[2026-04-03 00:16:02] 2026-04-03 04:15:07,818 | INFO     | nevents: 400
[2026-04-03 00:16:02] 2026-04-03 04:15:07,818 | INFO     | neventsw: 0
[2026-04-03 00:16:02] 2026-04-03 04:15:07,818 | INFO     | pid: 3850452
[2026-04-03 00:16:02] 2026-04-03 04:15:07,818 | INFO     | pgrp: 3850452
[2026-04-03 00:16:02] 2026-04-03 04:15:07,818 | INFO     | corecount: 9
[2026-04-03 00:16:02] 2026-04-03 04:15:07,818 | INFO     | event service: False
[2026-04-03 00:16:02] 2026-04-03 04:15:07,818 | INFO     | sizes: {0: 2279855, 1: 2280316, 12: 2280316, 32148: 2318984, 32149: 2318983, 32153: 2328037, 32155: 2328221, 32158: 2328415}
[2026-04-03 00:16:02] 2026-04-03 04:15:07,818 | INFO     | --------------------------------------------------
[2026-04-03 00:16:02] 2026-04-03 04:15:07,818 | INFO     | 
[2026-04-03 00:16:02] 2026-04-03 04:15:07,819 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-04-03 00:16:02] 2026-04-03 04:15:07,882 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,882 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,882 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,882 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,882 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,882 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,882 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,882 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,883 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,883 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,883 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,883 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,883 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,883 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,883 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,883 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 00:16:02] 2026-04-03 04:15:07,883 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,883 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 00:16:02] 2026-04-03 04:15:07,884 | INFO     | job 7057231663 has completed (purged errors)
[2026-04-03 00:16:02] 2026-04-03 04:15:07,884 | INFO     | overall cleanup function is called
[2026-04-03 00:16:02] 2026-04-03 04:15:08,900 | INFO     | --- collectZombieJob: --- 10, [3850452]
[2026-04-03 00:16:02] 2026-04-03 04:15:08,901 | INFO     | zombie collector waiting for pid 3850452
[2026-04-03 00:16:02] 2026-04-03 04:15:08,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 00:16:02] 2026-04-03 04:15:08,901 | INFO     | collected zombie processes
[2026-04-03 00:16:02] 2026-04-03 04:15:08,901 | INFO     | will attempt to kill all subprocesses of pid=3850452
[2026-04-03 00:16:02] 2026-04-03 04:15:09,549 | INFO     | process IDs to be killed: [3850452] (in reverse order)
[2026-04-03 00:16:02] 2026-04-03 04:15:09,771 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 00:16:02] 2026-04-03 04:15:09,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 00:16:02] 2026-04-03 04:15:09,795 | INFO     | did not find any defunct processes belonging to 3850452
[2026-04-03 00:16:02] 2026-04-03 04:15:09,812 | INFO     | did not find any defunct processes belonging to 3850452
[2026-04-03 00:16:02] 2026-04-03 04:15:09,812 | INFO     | ready for new job
[2026-04-03 00:16:02] 2026-04-03 04:15:09,812 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-03 00:16:02] 2026-04-03 04:15:09,828 | INFO     | **************************************
[2026-04-03 00:16:02] 2026-04-03 04:15:09,828 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-03 00:16:02] 2026-04-03 04:15:09,828 | INFO     | **************************************
[2026-04-03 00:16:02] 2026-04-03 04:15:09,828 | INFO     | 
[2026-04-03 00:16:02] 2026-04-03 04:15:09,866 | INFO     | architecture information:
[2026-04-03 00:16:02] 2026-04-03 04:15:09,878 | INFO     | executing command: cat /etc/os-release
[2026-04-03 00:16:02] 2026-04-03 04:15:09,920 | INFO     | cat /etc/os-release:
[2026-04-03 00:16:02] NAME="CentOS Linux"
[2026-04-03 00:16:02] VERSION="7 (Core)"
[2026-04-03 00:16:02] ID="centos"
[2026-04-03 00:16:02] ID_LIKE="rhel fedora"
[2026-04-03 00:16:02] VERSION_ID="7"
[2026-04-03 00:16:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 00:16:02] ANSI_COLOR="0;31"
[2026-04-03 00:16:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 00:16:02] HOME_URL="https://www.centos.org/"
[2026-04-03 00:16:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 00:16:02] 
[2026-04-03 00:16:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 00:16:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 00:16:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 00:16:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 00:16:02] 
[2026-04-03 00:16:02] 2026-04-03 04:15:09,920 | INFO     | **************************************
[2026-04-03 00:16:02] 2026-04-03 04:15:10,423 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-04-03 00:16:02] 2026-04-03 04:15:10,443 | INFO     | sufficient remaining disk space (95836700672 B)
[2026-04-03 00:16:02] 2026-04-03 04:15:10,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 00:16:02] 2026-04-03 04:15:10,444 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 00:16:02] 2026-04-03 04:15:10,444 | INFO     | update_server=False
[2026-04-03 00:16:02] 2026-04-03 04:15:10,444 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-03 00:16:02] 2026-04-03 04:15:10,851 | INFO     | all data control threads have been joined
[2026-04-03 00:16:02] 2026-04-03 04:15:10,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 00:16:02] 2026-04-03 04:15:10,951 | INFO     | all payload control threads have been joined
[2026-04-03 00:16:02] 2026-04-03 04:15:10,957 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 00:16:02] 2026-04-03 04:15:10,957 | INFO     | aborting loop
[2026-04-03 00:16:02] 2026-04-03 04:15:11,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 00:16:02] 2026-04-03 04:15:11,449 | INFO     | [job] retrieve thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:11,612 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:11,798 | INFO     | all job control threads have been joined
[2026-04-03 00:16:02] 2026-04-03 04:15:11,859 | INFO     | [data] control thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:11,939 | INFO     | [payload] failed_post thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:11,957 | INFO     | [payload] control thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:11,961 | INFO     | [job] job monitor thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:12,535 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:12,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 00:16:02] 2026-04-03 04:15:12,790 | INFO     | [payload] validate_post thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:12,804 | INFO     | [job] control thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:12,837 | INFO     | [data] copytool_in thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:12,875 | INFO     | [job] validate thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:12,906 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:12,915 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:13,010 | INFO     | [data] copytool_out thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:13,610 | INFO     | [job] queue monitor thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:14,951 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 00:16:02] 2026-04-03 04:15:40,548 | INFO     | PID=3834129 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-03 00:16:02] 2026-04-03 04:15:40,549 | INFO     | .. there are 21 such processes running
[2026-04-03 00:16:02] 2026-04-03 04:15:40,549 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 00:16:02] 2026-04-03 04:15:40,549 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 00:16:02] 2026-04-03 04:15:40,549 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 00:16:02] 2026-04-03 04:15:54,677 | INFO     | [monitor] cgroup control has ended
[2026-04-03 00:16:02] 2026-04-03 04:15:56,551 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140331188811584)>', '<ExcThread(monitor, started 140330833782528)>']
[2026-04-03 00:16:02] 2026-04-03 04:15:56,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 00:16:02] 2026-04-03 04:15:56,639 | INFO     | [monitor] control thread has ended
[2026-04-03 00:16:02] 2026-04-03 04:16:01,578 | INFO     | all workflow threads have been joined
[2026-04-03 00:16:02] 2026-04-03 04:16:01,579 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 00:16:02] 2026-04-03 04:16:01,579 | INFO     | traces error code: 0
[2026-04-03 00:16:02] 2026-04-03 04:16:01,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 00:16:02] 2026-04-03 04:16:01,915 [wrapper] ==== pilot stdout END ====
[2026-04-03 00:16:02] 2026-04-03 04:16:01,942 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 00:16:02] 2026-04-03 04:16:01,961 [wrapper] pilotpid: 3834129
[2026-04-03 00:16:02] 2026-04-03 04:16:01,989 [wrapper] Pilot exit status: 0
[2026-04-03 00:16:02] 2026-04-03 04:16:02,060 [wrapper] pandaids: 7057231663
[2026-04-03 00:16:02] 2026-04-03 04:16:02,187 [wrapper] cleanup supervisor_pilot 1345237 3834130
[2026-04-03 00:16:02] 2026-04-03 04:16:02,190 [wrapper] Test setup, not cleaning
[2026-04-03 00:16:02] 2026-04-03 04:16:02,192 [wrapper] apfmon messages muted
[2026-04-03 00:16:02] 2026-04-03 04:16:02,195 [wrapper] ==== wrapper stdout END ====
[2026-04-03 00:16:02] 2026-04-03 04:16:02,197 [wrapper] ==== wrapper stderr END ====
[2026-04-03 00:16:02]  *** Error codes and diagnostics ***
[2026-04-03 00:16:02]     "exeErrorCode": 0,
[2026-04-03 00:16:02]     "exeErrorDiag": "",
[2026-04-03 00:16:02]     "pilotErrorCode": 0,
[2026-04-03 00:16:02]     "pilotErrorDiag": "",
[2026-04-03 00:16:02]  *** Listing of results directory ***
[2026-04-03 00:16:02] total 480916
[2026-04-03 00:16:02] -rw-r--r--. 1 boincer umatlas    585013 Mar 17 08:21 pilot3.tar.gz
[2026-04-03 00:16:02] -rwx------. 1 boincer umatlas     36322 Mar 17 08:23 runpilot2-wrapper.sh
[2026-04-03 00:16:02] -rw-r--r--. 1 boincer umatlas      5111 Mar 17 08:24 queuedata.json
[2026-04-03 00:16:02] -rw-r--r--. 1 boincer umatlas       100 Apr  2 15:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 00:16:02] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  2 15:17 run_atlas
[2026-04-03 00:16:02] -rw-r--r--. 1 boincer umatlas       105 Apr  2 15:17 job.xml
[2026-04-03 00:16:02] -rw-r--r--. 2 boincer umatlas 243919730 Apr  2 15:17 EVNT.49135364._000014.pool.root.1
[2026-04-03 00:16:02] -rw-r--r--. 2 boincer umatlas     15845 Apr  2 15:17 start_atlas.sh
[2026-04-03 00:16:02] drwxrwx--x. 2 boincer umatlas      4096 Apr  2 15:17 shared
[2026-04-03 00:16:02] -rw-r--r--. 2 boincer umatlas    597544 Apr  2 15:17 input.tar.gz
[2026-04-03 00:16:02] -rw-r--r--. 1 boincer umatlas         0 Apr  2 15:17 boinc_lockfile
[2026-04-03 00:16:02] -rw-r--r--. 1 boincer umatlas      2604 Apr  2 15:17 pandaJob.out
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas        57 Apr  2 15:17 setup.sh.local
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas   1005191 Apr  2 15:18 agis_schedconf.cvmfs.json
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas       444 Apr  2 15:18 workernode_map.json
[2026-04-03 00:16:02] drwx------. 5 boincer umatlas      4096 Apr  2 15:18 pilot3
[2026-04-03 00:16:02] -rw-r--r--. 1 boincer umatlas      6878 Apr  3 00:10 init_data.xml
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas 235162424 Apr  3 00:14 HITS.49176822._000341.pool.root.1
[2026-04-03 00:16:02] -rw-r--r--. 1 boincer umatlas       532 Apr  3 00:14 boinc_task_state.xml
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas        95 Apr  3 00:14 pilot_heartbeat.json
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas      1054 Apr  3 00:14 memory_monitor_summary.json
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas   1511579 Apr  3 00:15 agis_ddmendpoints.agis.ALL.json
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas    701668 Apr  3 00:15 log.49176822._000341.job.log.tgz.1
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas      6409 Apr  3 00:15 heartbeat.json
[2026-04-03 00:16:02] -rw-r--r--. 1 boincer umatlas        29 Apr  3 00:15 wrapper_checkpoint.txt
[2026-04-03 00:16:02] -rw-r--r--. 1 boincer umatlas      8192 Apr  3 00:15 boinc_mmap_file
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas      4820 Apr  3 00:16 pilotlog.txt
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas   4018226 Apr  3 00:16 log.49176822._000341.job.log.1
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas       357 Apr  3 00:16 output.list
[2026-04-03 00:16:02] -rw-r--r--. 1 boincer umatlas       620 Apr  3 00:16 runtime_log
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas   4741120 Apr  3 00:16 result.tar.gz
[2026-04-03 00:16:02] -rw-r--r--. 1 boincer umatlas      9352 Apr  3 00:16 runtime_log.err
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas       663 Apr  3 00:16 2wlNDm6ciM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmjGxLDm3LWHTn.diag
[2026-04-03 00:16:02] -rw-r--r--. 1 boincer umatlas     10959 Apr  3 00:16 stderr.txt
[2026-04-03 00:16:02] HITS file was successfully produced:
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas 235162424 Apr  3 00:14 shared/HITS.pool.root.1
[2026-04-03 00:16:02]  *** Contents of shared directory: ***
[2026-04-03 00:16:02] total 473096
[2026-04-03 00:16:02] -rw-r--r--. 2 boincer umatlas 243919730 Apr  2 15:17 ATLAS.root_0
[2026-04-03 00:16:02] -rw-r--r--. 2 boincer umatlas     15845 Apr  2 15:17 start_atlas.sh
[2026-04-03 00:16:02] -rw-r--r--. 2 boincer umatlas    597544 Apr  2 15:17 input.tar.gz
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas 235162424 Apr  3 00:14 HITS.pool.root.1
[2026-04-03 00:16:02] -rw-------. 1 boincer umatlas   4741120 Apr  3 00:16 result.tar.gz
00:16:04 (3829439): run_atlas exited; CPU time 111999.256191
00:16:04 (3829439): called boinc_finish(0)

</stderr_txt>
]]>

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