Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:26:41 (3600187): wrapper (7.7.26015): starting
16:26:41 (3600187): wrapper: running run_atlas (--nthreads 4)
[2026-04-03 16:26:41] Arguments: --nthreads 4
[2026-04-03 16:26:41] Threads: 4
[2026-04-03 16:26:41] Checking for CVMFS
[2026-04-03 16:26:41] No cvmfs_config command found, will try listing directly
[2026-04-03 16:26:41] CVMFS is ok
[2026-04-03 16:26:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-03 16:26:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-03 16:26:41] Further information can be found at the LHC@home message board.
[2026-04-03 16:26:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-03 16:26:41] Checking for apptainer binary...
[2026-04-03 16:26:41] which: no apptainer in ((null))
[2026-04-03 16:26:41] apptainer is not installed, using version from CVMFS
[2026-04-03 16:26:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-03 16:26:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-04-03 16:26:42] apptainer works
[2026-04-03 16:26:42] Set ATHENA_PROC_NUMBER=4
[2026-04-03 16:26:42] Set ATHENA_CORE_NUMBER=4
[2026-04-03 16:26:42] Starting ATLAS job with PandaID=7065224298
[2026-04-03 16:26:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-03 21:51:21]  *** The last 200 lines of the pilot log: ***
[2026-04-03 21:51:21] 2026-04-03 19:49:01,473 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1822663/.job.ad'
[2026-04-03 21:51:21] 2026-04-03 19:49:01,473 | INFO     | total number of processed events: 400 (read)
[2026-04-03 21:51:21] 2026-04-03 19:49:01,497 | INFO     | using path: /var/lib/boinc/var/slot92/slots/0/PanDA_Pilot-7065224298/memory_monitor_summary.json (trf name=prmon)
[2026-04-03 21:51:21] 2026-04-03 19:49:01,498 | INFO     | extracted standard info from prmon json
[2026-04-03 21:51:21] 2026-04-03 19:49:01,498 | INFO     | extracted standard memory fields from prmon json
[2026-04-03 21:51:21] 2026-04-03 19:49:01,498 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-03 21:51:21] 2026-04-03 19:49:01,499 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-03 21:51:21] 2026-04-03 19:49:01,499 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-03 21:51:21] 2026-04-03 19:49:01,506 | INFO     | fitting pss+swap vs Time
[2026-04-03 21:51:21] 2026-04-03 19:49:01,507 | INFO     | sum of square deviations: 9784425315.0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,510 | INFO     | sum of deviations: 57543733503.49999
[2026-04-03 21:51:21] 2026-04-03 19:49:01,510 | INFO     | mean x: 1775236068.5
[2026-04-03 21:51:21] 2026-04-03 19:49:01,510 | INFO     | mean y: 2342330.509493671
[2026-04-03 21:51:21] 2026-04-03 19:49:01,510 | INFO     | intersect: -10438098261.842768
[2026-04-03 21:51:21] 2026-04-03 19:49:01,510 | INFO     | chi2: 1.3336146881095923
[2026-04-03 21:51:21] 2026-04-03 19:49:01,511 | INFO     | sum of square deviations: 9327281860.0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,514 | INFO     | sum of deviations: 56429054609.0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,514 | INFO     | mean x: 1775235916.0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,514 | INFO     | mean y: 2341958.5916398712
[2026-04-03 21:51:21] 2026-04-03 19:49:01,514 | INFO     | intersect: -10737644883.38658
[2026-04-03 21:51:21] 2026-04-03 19:49:01,515 | INFO     | chi2: 1.333747079372343
[2026-04-03 21:51:21] 2026-04-03 19:49:01,515 | INFO     | current chi2=1.333747079372343 (change=-0.009927249896919593 %)
[2026-04-03 21:51:21] 2026-04-03 19:49:01,515 | INFO     | right removable region: 310
[2026-04-03 21:51:21] 2026-04-03 19:49:01,516 | INFO     | sum of square deviations: 9327281860.0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,518 | INFO     | sum of deviations: 16812109777.0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,518 | INFO     | mean x: 1775236221.0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,518 | INFO     | mean y: 2355805.9485530546
[2026-04-03 21:51:21] 2026-04-03 19:49:01,518 | INFO     | intersect: -3197447381.6822143
[2026-04-03 21:51:21] 2026-04-03 19:49:01,519 | INFO     | chi2: 0.012008393729937714
[2026-04-03 21:51:21] 2026-04-03 19:49:01,519 | INFO     | current chi2=0.012008393729937714 (change=99.09956047747495 %)
[2026-04-03 21:51:21] 2026-04-03 19:49:01,519 | INFO     | sum of square deviations: 8884603792.5
[2026-04-03 21:51:21] 2026-04-03 19:49:01,522 | INFO     | sum of deviations: 12756061298.999998
[2026-04-03 21:51:21] 2026-04-03 19:49:01,522 | INFO     | mean x: 1775236373.5
[2026-04-03 21:51:21] 2026-04-03 19:49:01,522 | INFO     | mean y: 2357195.0130718956
[2026-04-03 21:51:21] 2026-04-03 19:49:01,522 | INFO     | intersect: -2546436710.652863
[2026-04-03 21:51:21] 2026-04-03 19:49:01,523 | INFO     | chi2: 0.0029406764306714925
[2026-04-03 21:51:21] 2026-04-03 19:49:01,523 | INFO     | current chi2=0.0029406764306714925 (change=75.51149223779868 %)
[2026-04-03 21:51:21] 2026-04-03 19:49:01,523 | INFO     | sum of square deviations: 8456158550.0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,525 | INFO     | sum of deviations: 11627973719.999998
[2026-04-03 21:51:21] 2026-04-03 19:49:01,526 | INFO     | mean x: 1775236526.0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,526 | INFO     | mean y: 2357595.398671096
[2026-04-03 21:51:21] 2026-04-03 19:49:01,526 | INFO     | intersect: -2438751277.9812036
[2026-04-03 21:51:21] 2026-04-03 19:49:01,526 | INFO     | chi2: 0.002770760646788212
[2026-04-03 21:51:21] 2026-04-03 19:49:01,526 | INFO     | current chi2=0.002770760646788212 (change=5.778119010682205 %)
[2026-04-03 21:51:21] 2026-04-03 19:49:01,526 | INFO     | left removable region: 30
[2026-04-03 21:51:21] 2026-04-03 19:49:01,527 | INFO     | sum of square deviations: 6806862510.0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,529 | INFO     | sum of deviations: 11267364717.000002
[2026-04-03 21:51:21] 2026-04-03 19:49:01,529 | INFO     | mean x: 1775236800.5
[2026-04-03 21:51:21] 2026-04-03 19:49:01,529 | INFO     | mean y: 2357396.4714285713
[2026-04-03 21:51:21] 2026-04-03 19:49:01,529 | INFO     | intersect: -2936183004.614721
[2026-04-03 21:51:21] 2026-04-03 19:49:01,530 | INFO     | chi2: 0.002123363181880742
[2026-04-03 21:51:21] 2026-04-03 19:49:01,530 | INFO     | current memory leak: 1.66 B/s (using 280 data points, chi2=0.00)
[2026-04-03 21:51:21] 2026-04-03 19:49:01,531 | INFO     | could have reported an average CPU frequency of 2753 MHz (14 samples)
[2026-04-03 21:51:21] 2026-04-03 19:49:01,531 | INFO     | ..............................
[2026-04-03 21:51:21] 2026-04-03 19:49:01,531 | INFO     | . Timing measurements:
[2026-04-03 21:51:21] 2026-04-03 19:49:01,531 | INFO     | . get job = 0 s
[2026-04-03 21:51:21] 2026-04-03 19:49:01,531 | INFO     | . initial setup = 8 s
[2026-04-03 21:51:21] 2026-04-03 19:49:01,531 | INFO     | . payload setup = 16 s
[2026-04-03 21:51:21] 2026-04-03 19:49:01,531 | INFO     | . stage-in = 0 s
[2026-04-03 21:51:21] 2026-04-03 19:49:01,532 | INFO     | . payload execution = 19283 s
[2026-04-03 21:51:21] 2026-04-03 19:49:01,532 | INFO     | . stage-out = 1 s
[2026-04-03 21:51:21] 2026-04-03 19:49:01,532 | INFO     | . log creation = 0 s
[2026-04-03 21:51:21] 2026-04-03 19:49:01,532 | INFO     | ..............................
[2026-04-03 21:51:21] 2026-04-03 19:49:01,557 | INFO     | time since job start (19316s) is within the limit (345600.0s)
[2026-04-03 21:51:21] 2026-04-03 19:49:01,633 | INFO     | 
[2026-04-03 21:51:21] 2026-04-03 19:49:01,633 | INFO     | job summary report
[2026-04-03 21:51:21] 2026-04-03 19:49:01,633 | INFO     | --------------------------------------------------
[2026-04-03 21:51:21] 2026-04-03 19:49:01,633 | INFO     | PanDA job id: 7065224298
[2026-04-03 21:51:21] 2026-04-03 19:49:01,633 | INFO     | task id: 49178177
[2026-04-03 21:51:21] 2026-04-03 19:49:01,633 | INFO     | errors: (none)
[2026-04-03 21:51:21] 2026-04-03 19:49:01,634 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-03 21:51:21] 2026-04-03 19:49:01,634 | INFO     | pilot state: finished 
[2026-04-03 21:51:21] 2026-04-03 19:49:01,634 | INFO     | transexitcode: 0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,634 | INFO     | exeerrorcode: 0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,634 | INFO     | exeerrordiag: 
[2026-04-03 21:51:21] 2026-04-03 19:49:01,634 | INFO     | exitcode: 0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,634 | INFO     | exitmsg: OK
[2026-04-03 21:51:21] 2026-04-03 19:49:01,634 | INFO     | cpuconsumptiontime: 75695 s
[2026-04-03 21:51:21] 2026-04-03 19:49:01,634 | INFO     | nevents: 400
[2026-04-03 21:51:21] 2026-04-03 19:49:01,634 | INFO     | neventsw: 0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,634 | INFO     | pid: 3637032
[2026-04-03 21:51:21] 2026-04-03 19:49:01,635 | INFO     | pgrp: 3637032
[2026-04-03 21:51:21] 2026-04-03 19:49:01,635 | INFO     | corecount: 4
[2026-04-03 21:51:21] 2026-04-03 19:49:01,635 | INFO     | event service: False
[2026-04-03 21:51:21] 2026-04-03 19:49:01,635 | INFO     | sizes: {0: 2279248, 1: 2280377, 12: 2280377, 19303: 2314238, 19304: 2323314, 19305: 2323452}
[2026-04-03 21:51:21] 2026-04-03 19:49:01,635 | INFO     | --------------------------------------------------
[2026-04-03 21:51:21] 2026-04-03 19:49:01,635 | INFO     | 
[2026-04-03 21:51:21] 2026-04-03 19:49:01,635 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot92/slots/0
[2026-04-03 21:51:21] 2026-04-03 19:49:01,669 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,670 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,670 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,670 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,671 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,671 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,671 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,671 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,671 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,672 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-03 21:51:21] 2026-04-03 19:49:01,672 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,672 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-03 21:51:21] 2026-04-03 19:49:01,672 | INFO     | job 7065224298 has completed (purged errors)
[2026-04-03 21:51:21] 2026-04-03 19:49:01,672 | INFO     | overall cleanup function is called
[2026-04-03 21:51:21] 2026-04-03 19:49:02,681 | INFO     | --- collectZombieJob: --- 10, [3637032]
[2026-04-03 21:51:21] 2026-04-03 19:49:02,682 | INFO     | zombie collector waiting for pid 3637032
[2026-04-03 21:51:21] 2026-04-03 19:49:02,682 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-03 21:51:21] 2026-04-03 19:49:02,682 | INFO     | collected zombie processes
[2026-04-03 21:51:21] 2026-04-03 19:49:02,682 | INFO     | will attempt to kill all subprocesses of pid=3637032
[2026-04-03 21:51:21] 2026-04-03 19:49:03,224 | INFO     | process IDs to be killed: [3637032] (in reverse order)
[2026-04-03 21:51:21] 2026-04-03 19:49:03,472 | WARNING  | found no corresponding commands to process id(s)
[2026-04-03 21:51:21] 2026-04-03 19:49:03,472 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-03 21:51:21] 2026-04-03 19:49:03,496 | INFO     | did not find any defunct processes belonging to 3637032
[2026-04-03 21:51:21] 2026-04-03 19:49:03,514 | INFO     | did not find any defunct processes belonging to 3637032
[2026-04-03 21:51:21] 2026-04-03 19:49:03,515 | INFO     | ready for new job
[2026-04-03 21:51:21] 2026-04-03 19:49:03,515 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-03 21:51:21] 2026-04-03 19:49:03,517 | INFO     | **************************************
[2026-04-03 21:51:21] 2026-04-03 19:49:03,518 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-03 21:51:21] 2026-04-03 19:49:03,518 | INFO     | **************************************
[2026-04-03 21:51:21] 2026-04-03 19:49:03,518 | INFO     | 
[2026-04-03 21:51:21] 2026-04-03 19:49:03,523 | INFO     | architecture information:
[2026-04-03 21:51:21] 2026-04-03 19:49:03,524 | INFO     | executing command: cat /etc/os-release
[2026-04-03 21:51:21] 2026-04-03 19:49:03,539 | INFO     | cat /etc/os-release:
[2026-04-03 21:51:21] NAME="CentOS Linux"
[2026-04-03 21:51:21] VERSION="7 (Core)"
[2026-04-03 21:51:21] ID="centos"
[2026-04-03 21:51:21] ID_LIKE="rhel fedora"
[2026-04-03 21:51:21] VERSION_ID="7"
[2026-04-03 21:51:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-03 21:51:21] ANSI_COLOR="0;31"
[2026-04-03 21:51:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-03 21:51:21] HOME_URL="https://www.centos.org/"
[2026-04-03 21:51:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-03 21:51:21] 
[2026-04-03 21:51:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-03 21:51:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-03 21:51:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-03 21:51:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-03 21:51:21] 
[2026-04-03 21:51:21] 2026-04-03 19:49:03,539 | INFO     | **************************************
[2026-04-03 21:51:21] 2026-04-03 19:49:04,042 | INFO     | executing command: df -mP /var/lib/boinc/var/slot92/slots/0
[2026-04-03 21:51:21] 2026-04-03 19:49:04,067 | INFO     | sufficient remaining disk space (306104500224 B)
[2026-04-03 21:51:21] 2026-04-03 19:49:04,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-03 21:51:21] 2026-04-03 19:49:04,069 | INFO     | current server update state: UPDATING_FINAL
[2026-04-03 21:51:21] 2026-04-03 19:49:04,069 | INFO     | update_server=False
[2026-04-03 21:51:21] 2026-04-03 19:49:04,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-03 21:51:21] 2026-04-03 19:49:04,178 | INFO     | all data control threads have been joined
[2026-04-03 21:51:21] 2026-04-03 19:49:04,375 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-03 21:51:21] 2026-04-03 19:49:04,375 | INFO     | aborting loop
[2026-04-03 21:51:21] 2026-04-03 19:49:04,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-03 21:51:21] 2026-04-03 19:49:04,819 | INFO     | all job control threads have been joined
[2026-04-03 21:51:21] 2026-04-03 19:49:05,075 | INFO     | [job] retrieve thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:05,121 | INFO     | all payload control threads have been joined
[2026-04-03 21:51:21] 2026-04-03 19:49:05,183 | INFO     | [data] control thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:05,381 | INFO     | [job] job monitor thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:05,477 | INFO     | [job] create_data_payload thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:05,607 | INFO     | [job] validate thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:05,687 | INFO     | [payload] execute_payloads thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:05,801 | INFO     | [payload] validate_pre thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:05,825 | INFO     | [job] control thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:06,103 | INFO     | [payload] validate_post thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:06,123 | INFO     | [payload] control thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:06,296 | INFO     | [data] copytool_in thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:06,394 | INFO     | [data] copytool_out thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:06,502 | INFO     | [payload] failed_post thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:06,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-03 21:51:21] 2026-04-03 19:49:07,473 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-03 21:51:21] 2026-04-03 19:49:07,649 | INFO     | [job] queue monitor thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:11,478 | INFO     | [data] queue_monitor thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:14,519 | INFO     | job.realtimelogging is not enabled
[2026-04-03 21:51:21] 2026-04-03 19:49:15,525 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-03 21:51:21] 2026-04-03 19:49:35,125 | INFO     | [monitor] cgroup control has ended
[2026-04-03 21:51:21] 2026-04-03 19:49:35,556 | INFO     | PID=3615061 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-03 21:51:21] 2026-04-03 19:49:35,556 | INFO     | .. there are 13 such processes running
[2026-04-03 21:51:21] 2026-04-03 19:49:35,557 | INFO     | found 0 job(s) in 20 queues
[2026-04-03 21:51:21] 2026-04-03 19:49:35,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-03 21:51:21] 2026-04-03 19:49:35,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-03 21:51:21] 2026-04-03 19:49:37,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23097943078720)>', '<ExcThread(monitor, started 23097691592448)>']
[2026-04-03 21:51:21] 2026-04-03 19:49:37,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-03 21:51:21] 2026-04-03 19:49:37,567 | INFO     | [monitor] control thread has ended
[2026-04-03 21:51:21] 2026-04-03 19:49:42,243 | INFO     | all workflow threads have been joined
[2026-04-03 21:51:21] 2026-04-03 19:49:42,243 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-03 21:51:21] 2026-04-03 19:49:42,243 | INFO     | traces error code: 0
[2026-04-03 21:51:21] 2026-04-03 19:49:42,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-03 21:51:21] 2026-04-03 19:49:42,407 [wrapper] ==== pilot stdout END ====
[2026-04-03 21:51:21] 2026-04-03 19:49:42,411 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-03 21:51:21] 2026-04-03 19:49:42,414 [wrapper] pilotpid: 3615061
[2026-04-03 21:51:21] 2026-04-03 19:49:42,418 [wrapper] Pilot exit status: 0
[2026-04-03 21:51:21] 2026-04-03 19:49:42,429 [wrapper] pandaids: 7065224298
[2026-04-03 21:51:21] 2026-04-03 19:49:42,601 [wrapper] cleanup supervisor_pilot 4156752 3615062
[2026-04-03 21:51:21] 2026-04-03 19:49:42,606 [wrapper] Test setup, not cleaning
[2026-04-03 21:51:21] 2026-04-03 19:49:42,610 [wrapper] apfmon messages muted
[2026-04-03 21:51:21] 2026-04-03 19:49:42,615 [wrapper] ==== wrapper stdout END ====
[2026-04-03 21:51:21] 2026-04-03 19:49:42,619 [wrapper] ==== wrapper stderr END ====
[2026-04-03 21:51:21]  *** Error codes and diagnostics ***
[2026-04-03 21:51:21]     "exeErrorCode": 0,
[2026-04-03 21:51:21]     "exeErrorDiag": "",
[2026-04-03 21:51:21]     "pilotErrorCode": 0,
[2026-04-03 21:51:21]     "pilotErrorDiag": "",
[2026-04-03 21:51:21]  *** Listing of results directory ***
[2026-04-03 21:51:21] total 443584
[2026-04-03 21:51:21] -rwx------. 1 boinc boinc     36322 Mar 25 12:56 runpilot2-wrapper.sh
[2026-04-03 21:51:21] -rw-r--r--. 1 boinc boinc    585013 Mar 25 12:57 pilot3.tar.gz
[2026-04-03 21:51:21] -rw-r--r--. 1 boinc boinc      5111 Mar 25 12:59 queuedata.json
[2026-04-03 21:51:21] -rw-r--r--. 1 boinc boinc       100 Apr  3 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-03 21:51:21] -rwxr-xr-x. 1 boinc boinc      7986 Apr  3 16:26 run_atlas
[2026-04-03 21:51:21] -rw-r--r--. 1 boinc boinc       105 Apr  3 16:26 job.xml
[2026-04-03 21:51:21] -rw-r--r--. 2 boinc boinc 230061814 Apr  3 16:26 EVNT.49128225._000006.pool.root.1
[2026-04-03 21:51:21] -rw-r--r--. 1 boinc boinc      6622 Apr  3 16:26 init_data.xml
[2026-04-03 21:51:21] -rw-r--r--. 2 boinc boinc     15845 Apr  3 16:26 start_atlas.sh
[2026-04-03 21:51:21] drwxrwx--x. 2 boinc boinc      4096 Apr  3 16:26 shared
[2026-04-03 21:51:21] -rw-r--r--. 2 boinc boinc    597570 Apr  3 16:26 input.tar.gz
[2026-04-03 21:51:21] -rw-r--r--. 1 boinc boinc         0 Apr  3 16:26 boinc_lockfile
[2026-04-03 21:51:21] -rw-r--r--. 1 boinc boinc      2693 Apr  3 16:26 pandaJob.out
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc   1005111 Apr  3 16:26 agis_schedconf.cvmfs.json
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc       443 Apr  3 16:27 workernode_map.json
[2026-04-03 21:51:21] drwx------. 5 boinc boinc      4096 Apr  3 16:27 pilot3
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc 213957067 Apr  3 21:48 HITS.49178177._000241.pool.root.1
[2026-04-03 21:51:21] -rw-r--r--. 1 boinc boinc       528 Apr  3 21:48 boinc_task_state.xml
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc      1026 Apr  3 21:48 memory_monitor_summary.json
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc   1511579 Apr  3 21:49 agis_ddmendpoints.agis.ALL.json
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc    478135 Apr  3 21:49 log.49178177._000241.job.log.tgz.1
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc      6346 Apr  3 21:49 heartbeat.json
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc        95 Apr  3 21:49 pilot_heartbeat.json
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc      4903 Apr  3 21:49 pilotlog.txt
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc   2658882 Apr  3 21:49 log.49178177._000241.job.log.1
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc       357 Apr  3 21:49 output.list
[2026-04-03 21:51:21] -rw-r--r--. 1 boinc boinc       620 Apr  3 21:49 runtime_log
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc   3153920 Apr  3 21:49 result.tar.gz
[2026-04-03 21:51:21] -rw-r--r--. 1 boinc boinc      9205 Apr  3 21:49 runtime_log.err
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc       666 Apr  3 21:49 ISWLDmT1bP9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9SCMDmQ2oHPn.diag
[2026-04-03 21:51:21] -rw-r--r--. 1 boinc boinc        26 Apr  3 21:51 wrapper_checkpoint.txt
[2026-04-03 21:51:21] -rw-r--r--. 1 boinc boinc      8192 Apr  3 21:51 boinc_mmap_file
[2026-04-03 21:51:21] -rw-r--r--. 1 boinc boinc     20903 Apr  3 21:51 stderr.txt
[2026-04-03 21:51:21] HITS file was successfully produced:
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc 213957067 Apr  3 21:48 shared/HITS.pool.root.1
[2026-04-03 21:51:21]  *** Contents of shared directory: ***
[2026-04-03 21:51:21] total 437304
[2026-04-03 21:51:21] -rw-r--r--. 2 boinc boinc 230061814 Apr  3 16:26 ATLAS.root_0
[2026-04-03 21:51:21] -rw-r--r--. 2 boinc boinc     15845 Apr  3 16:26 start_atlas.sh
[2026-04-03 21:51:21] -rw-r--r--. 2 boinc boinc    597570 Apr  3 16:26 input.tar.gz
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc 213957067 Apr  3 21:48 HITS.pool.root.1
[2026-04-03 21:51:21] -rw-------. 1 boinc boinc   3153920 Apr  3 21:49 result.tar.gz
21:51:22 (3600187): run_atlas exited; CPU time 77047.217586
21:51:22 (3600187): called boinc_finish(0)

</stderr_txt>
]]>

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