Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:38:26 (716899): wrapper (7.7.26015): starting
00:38:26 (716899): wrapper: running run_atlas (--nthreads 4)
[2026-04-05 00:38:26] Arguments: --nthreads 4
[2026-04-05 00:38:26] Threads: 4
[2026-04-05 00:38:26] Checking for CVMFS
[2026-04-05 00:38:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-05 00:38:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-05 00:38:28] Running cvmfs_config stat atlas.cern.ch
[2026-04-05 00:38:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-05 00:38:28] 2.13.3.0 112136 3178 50272 158092 0 50 4135970 4194304 1836 130560 0 2229168 99.991 111844 240 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-04-05 00:38:28] CVMFS is ok
[2026-04-05 00:38:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-05 00:38:28] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-05 00:38:28] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-05 00:38:28] Further information can be found at the LHC@home message board.
[2026-04-05 00:38:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-05 00:38:28] Checking for apptainer binary...
[2026-04-05 00:38:28] apptainer is not installed, using version from CVMFS
[2026-04-05 00:38:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-05 00:38:28] Ryze
[2026-04-05 00:38:28] apptainer works
[2026-04-05 00:38:28] Set ATHENA_PROC_NUMBER=4
[2026-04-05 00:38:28] Set ATHENA_CORE_NUMBER=4
[2026-04-05 00:38:28] Starting ATLAS job with PandaID=7057178145
[2026-04-05 00:38:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-05 03:40:08]  *** The last 200 lines of the pilot log: ***
[2026-04-05 03:40:08] 2026-04-05 01:39:35,989 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-05 03:40:08] 2026-04-05 01:39:36,375 | INFO     | job 7057178145 has state=finished
[2026-04-05 03:40:08] 2026-04-05 01:39:36,375 | INFO     | preparing for final server update for job 7057178145 in state='finished'
[2026-04-05 03:40:08] 2026-04-05 01:39:36,375 | INFO     | reading metadata from: /var/lib/boinc-client/slots/9/PanDA_Pilot-7057178145/jobReport.json
[2026-04-05 03:40:08] 2026-04-05 01:39:36,376 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/9/workernode_map.json
[2026-04-05 03:40:08] 2026-04-05 01:39:36,376 | INFO     | this job has now completed (state=finished)
[2026-04-05 03:40:08] 2026-04-05 01:39:36,376 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-05 03:40:08] 2026-04-05 01:39:36,377 | INFO     | log transfer has been attempted: DONE
[2026-04-05 03:40:08] 2026-04-05 01:39:36,377 | INFO     | job 7057178145 has finished - writing final server update
[2026-04-05 03:40:08] 2026-04-05 01:39:36,377 | INFO     | total number of processed events: 400 (read)
[2026-04-05 03:40:08] 2026-04-05 01:39:36,380 | INFO     | using path: /var/lib/boinc-client/slots/9/PanDA_Pilot-7057178145/memory_monitor_summary.json (trf name=prmon)
[2026-04-05 03:40:08] 2026-04-05 01:39:36,381 | INFO     | extracted standard info from prmon json
[2026-04-05 03:40:08] 2026-04-05 01:39:36,381 | INFO     | extracted standard memory fields from prmon json
[2026-04-05 03:40:08] 2026-04-05 01:39:36,381 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-05 03:40:08] 2026-04-05 01:39:36,381 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-05 03:40:08] 2026-04-05 01:39:36,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-05 03:40:08] 2026-04-05 01:39:36,383 | INFO     | fitting pss+swap vs Time
[2026-04-05 03:40:08] 2026-04-05 01:39:36,383 | INFO     | sum of square deviations: 1748737904.5
[2026-04-05 03:40:08] 2026-04-05 01:39:36,383 | INFO     | sum of deviations: -36963641892.50001
[2026-04-05 03:40:08] 2026-04-05 01:39:36,383 | INFO     | mean x: 1775347744.5
[2026-04-05 03:40:08] 2026-04-05 01:39:36,383 | INFO     | mean y: 2389208.117977528
[2026-04-05 03:40:08] 2026-04-05 01:39:36,383 | INFO     | intersect: 37528491943.97573
[2026-04-05 03:40:08] 2026-04-05 01:39:36,384 | INFO     | chi2: 1.5310663058851668
[2026-04-05 03:40:08] 2026-04-05 01:39:36,384 | INFO     | sum of square deviations: 1605470102.0
[2026-04-05 03:40:08] 2026-04-05 01:39:36,384 | INFO     | sum of deviations: -36123979424.0
[2026-04-05 03:40:08] 2026-04-05 01:39:36,384 | INFO     | mean x: 1775347592.0
[2026-04-05 03:40:08] 2026-04-05 01:39:36,384 | INFO     | mean y: 2390102.098265896
[2026-04-05 03:40:08] 2026-04-05 01:39:36,384 | INFO     | intersect: 39948708506.88408
[2026-04-05 03:40:08] 2026-04-05 01:39:36,384 | INFO     | chi2: 1.5196538876477148
[2026-04-05 03:40:08] 2026-04-05 01:39:36,384 | INFO     | current chi2=1.5196538876477148 (change=0.7453902024742185 %)
[2026-04-05 03:40:08] 2026-04-05 01:39:36,384 | INFO     | right removable region: 172
[2026-04-05 03:40:08] 2026-04-05 01:39:36,385 | INFO     | sum of square deviations: 1605470102.0
[2026-04-05 03:40:08] 2026-04-05 01:39:36,385 | INFO     | sum of deviations: -51352770212.00001
[2026-04-05 03:40:08] 2026-04-05 01:39:36,385 | INFO     | mean x: 1775347897.0
[2026-04-05 03:40:08] 2026-04-05 01:39:36,385 | INFO     | mean y: 2404133.5953757227
[2026-04-05 03:40:08] 2026-04-05 01:39:36,385 | INFO     | intersect: 56788907032.29492
[2026-04-05 03:40:08] 2026-04-05 01:39:36,385 | INFO     | chi2: 0.3965284043142988
[2026-04-05 03:40:08] 2026-04-05 01:39:36,385 | INFO     | current chi2=0.3965284043142988 (change=74.10116055783419 %)
[2026-04-05 03:40:08] 2026-04-05 01:39:36,385 | INFO     | sum of square deviations: 1470248962.0
[2026-04-05 03:40:08] 2026-04-05 01:39:36,386 | INFO     | sum of deviations: -43642092692.5
[2026-04-05 03:40:08] 2026-04-05 01:39:36,386 | INFO     | mean x: 1775348049.5
[2026-04-05 03:40:08] 2026-04-05 01:39:36,386 | INFO     | mean y: 2395430.886904762
[2026-04-05 03:40:08] 2026-04-05 01:39:36,386 | INFO     | intersect: 52700888094.5587
[2026-04-05 03:40:08] 2026-04-05 01:39:36,386 | INFO     | chi2: 0.38290473188465
[2026-04-05 03:40:08] 2026-04-05 01:39:36,386 | INFO     | current chi2=0.38290473188465 (change=3.43573683030543 %)
[2026-04-05 03:40:08] 2026-04-05 01:39:36,386 | INFO     | left removable region: 20
[2026-04-05 03:40:08] 2026-04-05 01:39:36,386 | INFO     | sum of square deviations: 1088905998.0
[2026-04-05 03:40:08] 2026-04-05 01:39:36,386 | INFO     | sum of deviations: -26100858028.5
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | mean x: 1775348171.5
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | mean y: 2374978.5986842103
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | intersect: 42557114010.79067
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | chi2: 0.3044691292649951
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | current memory leak: -23.97 B/s (using 152 data points, chi2=0.30)
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | could have reported an average CPU frequency of 3641 MHz (10 samples)
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | ..............................
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | . Timing measurements:
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | . get job = 0 s
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | . initial setup = 4 s
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | . payload setup = 7 s
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | . stage-in = 0 s
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | . payload execution = 10825 s
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | . stage-out = 0 s
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | . log creation = 0 s
[2026-04-05 03:40:08] 2026-04-05 01:39:36,387 | INFO     | ..............................
[2026-04-05 03:40:08] 2026-04-05 01:39:36,641 | INFO     | 
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | job summary report
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | --------------------------------------------------
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | PanDA job id: 7057178145
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | task id: 49176670
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | errors: (none)
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | pilot state: finished 
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | transexitcode: 0
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | exeerrorcode: 0
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | exeerrordiag: 
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | exitcode: 0
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | exitmsg: OK
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | cpuconsumptiontime: 42338 s
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | nevents: 400
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | neventsw: 0
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | pid: 725572
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | pgrp: 725572
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | corecount: 4
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | event service: False
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | sizes: {0: 2279867, 1: 2280328, 11: 2280328, 10837: 2309632, 10838: 2318644, 10839: 2318700, 10842: 2319022}
[2026-04-05 03:40:08] 2026-04-05 01:39:36,642 | INFO     | --------------------------------------------------
[2026-04-05 03:40:08] 2026-04-05 01:39:36,643 | INFO     | 
[2026-04-05 03:40:08] 2026-04-05 01:39:36,643 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/9
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-05 03:40:08] 2026-04-05 01:39:36,660 | INFO     | job 7057178145 has completed (purged errors)
[2026-04-05 03:40:08] 2026-04-05 01:39:36,661 | INFO     | overall cleanup function is called
[2026-04-05 03:40:08] 2026-04-05 01:39:37,668 | INFO     | --- collectZombieJob: --- 10, [725572]
[2026-04-05 03:40:08] 2026-04-05 01:39:37,668 | INFO     | zombie collector waiting for pid 725572
[2026-04-05 03:40:08] 2026-04-05 01:39:37,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-05 03:40:08] 2026-04-05 01:39:37,668 | INFO     | collected zombie processes
[2026-04-05 03:40:08] 2026-04-05 01:39:37,668 | INFO     | will attempt to kill all subprocesses of pid=725572
[2026-04-05 03:40:08] 2026-04-05 01:39:37,739 | INFO     | process IDs to be killed: [725572] (in reverse order)
[2026-04-05 03:40:08] 2026-04-05 01:39:37,784 | WARNING  | found no corresponding commands to process id(s)
[2026-04-05 03:40:08] 2026-04-05 01:39:37,784 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-05 03:40:08] 2026-04-05 01:39:37,787 | INFO     | did not find any defunct processes belonging to 725572
[2026-04-05 03:40:08] 2026-04-05 01:39:37,790 | INFO     | did not find any defunct processes belonging to 725572
[2026-04-05 03:40:08] 2026-04-05 01:39:37,790 | INFO     | ready for new job
[2026-04-05 03:40:08] 2026-04-05 01:39:37,790 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-05 03:40:08] 2026-04-05 01:39:37,791 | INFO     | **************************************
[2026-04-05 03:40:08] 2026-04-05 01:39:37,791 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-05 03:40:08] 2026-04-05 01:39:37,791 | INFO     | **************************************
[2026-04-05 03:40:08] 2026-04-05 01:39:37,791 | INFO     | 
[2026-04-05 03:40:08] 2026-04-05 01:39:37,792 | INFO     | architecture information:
[2026-04-05 03:40:08] 2026-04-05 01:39:37,793 | INFO     | executing command: cat /etc/os-release
[2026-04-05 03:40:08] 2026-04-05 01:39:37,806 | INFO     | cat /etc/os-release:
[2026-04-05 03:40:08] NAME="CentOS Linux"
[2026-04-05 03:40:08] VERSION="7 (Core)"
[2026-04-05 03:40:08] ID="centos"
[2026-04-05 03:40:08] ID_LIKE="rhel fedora"
[2026-04-05 03:40:08] VERSION_ID="7"
[2026-04-05 03:40:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-05 03:40:08] ANSI_COLOR="0;31"
[2026-04-05 03:40:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-05 03:40:08] HOME_URL="https://www.centos.org/"
[2026-04-05 03:40:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-05 03:40:08] 
[2026-04-05 03:40:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-05 03:40:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-05 03:40:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-05 03:40:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-05 03:40:08] 
[2026-04-05 03:40:08] 2026-04-05 01:39:37,806 | INFO     | **************************************
[2026-04-05 03:40:08] 2026-04-05 01:39:38,309 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/9
[2026-04-05 03:40:08] 2026-04-05 01:39:38,325 | INFO     | sufficient remaining disk space (2898400378880 B)
[2026-04-05 03:40:08] 2026-04-05 01:39:38,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-05 03:40:08] 2026-04-05 01:39:38,325 | INFO     | current server update state: UPDATING_FINAL
[2026-04-05 03:40:08] 2026-04-05 01:39:38,325 | INFO     | update_server=False
[2026-04-05 03:40:08] 2026-04-05 01:39:38,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-05 03:40:08] 2026-04-05 01:39:38,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-05 03:40:08] 2026-04-05 01:39:38,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-05 03:40:08] 2026-04-05 01:39:38,492 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-05 03:40:08] 2026-04-05 01:39:38,492 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-05 03:40:08] 2026-04-05 01:39:38,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-05 03:40:08] 2026-04-05 01:39:38,492 | INFO     | will abort loop
[2026-04-05 03:40:08] 2026-04-05 01:39:38,519 | INFO     | all job control threads have been joined
[2026-04-05 03:40:08] 2026-04-05 01:39:38,656 | INFO     | all data control threads have been joined
[2026-04-05 03:40:08] 2026-04-05 01:39:38,884 | INFO     | all payload control threads have been joined
[2026-04-05 03:40:08] 2026-04-05 01:39:39,330 | INFO     | [job] queue monitor thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:39,330 | INFO     | [job] retrieve thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:39,394 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-05 03:40:08] 2026-04-05 01:39:39,497 | INFO     | [job] job monitor thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:39,524 | INFO     | [job] control thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:39,565 | INFO     | [payload] validate_pre thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:39,661 | INFO     | [data] control thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:39,689 | INFO     | [payload] execute_payloads thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:39,817 | INFO     | [data] copytool_in thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:39,824 | INFO     | [payload] failed_post thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:39,885 | INFO     | [payload] control thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:39,941 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:40,330 | INFO     | [data] copytool_out thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:40,332 | INFO     | [payload] validate_post thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:40,709 | INFO     | [job] create_data_payload thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:40,829 | INFO     | [job] validate thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:43,400 | INFO     | [data] queue_monitor thread has finished
[2026-04-05 03:40:08] 2026-04-05 01:39:59,561 | INFO     | [monitor] cgroup control has ended
[2026-04-05 03:40:08] 2026-04-05 01:40:01,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128298787170112)>', '<ExcThread(monitor, started 128298105427712)>']
[2026-04-05 03:40:08] 2026-04-05 01:40:06,668 | INFO     | all workflow threads have been joined
[2026-04-05 03:40:08] 2026-04-05 01:40:06,668 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-05 03:40:08] 2026-04-05 01:40:06,669 | INFO     | traces error code: 0
[2026-04-05 03:40:08] 2026-04-05 01:40:06,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-05 03:40:08] 2026-04-05 01:40:07,943 | INFO     | PID=721040 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-05 03:40:08] 2026-04-05 01:40:07,943 | INFO     | found 0 job(s) in 20 queues
[2026-04-05 03:40:08] 2026-04-05 01:40:07,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-05 03:40:08] 2026-04-05 01:40:07,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-05 03:40:08] 2026-04-05 01:40:07,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-05 03:40:08] 2026-04-05 01:40:07,943 | INFO     | [monitor] control thread has ended
[2026-04-05 03:40:08] 2026-04-05 01:40:08,015 [wrapper] ==== pilot stdout END ====
[2026-04-05 03:40:08] 2026-04-05 01:40:08,017 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-05 03:40:08] 2026-04-05 01:40:08,018 [wrapper] pilotpid: 721040
[2026-04-05 03:40:08] 2026-04-05 01:40:08,021 [wrapper] Pilot exit status: 0
[2026-04-05 03:40:08] 2026-04-05 01:40:08,030 [wrapper] pandaids: 7057178145
[2026-04-05 03:40:08] 2026-04-05 01:40:08,056 [wrapper] cleanup supervisor_pilot  748760 721041
[2026-04-05 03:40:08] 2026-04-05 01:40:08,059 [wrapper] Test setup, not cleaning
[2026-04-05 03:40:08] 2026-04-05 01:40:08,061 [wrapper] apfmon messages muted
[2026-04-05 03:40:08] 2026-04-05 01:40:08,063 [wrapper] ==== wrapper stdout END ====
[2026-04-05 03:40:08] 2026-04-05 01:40:08,064 [wrapper] ==== wrapper stderr END ====
[2026-04-05 03:40:08]  *** Error codes and diagnostics ***
[2026-04-05 03:40:08]     "exeErrorCode": 0,
[2026-04-05 03:40:08]     "exeErrorDiag": "",
[2026-04-05 03:40:08]     "pilotErrorCode": 0,
[2026-04-05 03:40:08]     "pilotErrorDiag": "",
[2026-04-05 03:40:08]  *** Listing of results directory ***
[2026-04-05 03:40:08] insgesamt 412508
[2026-04-05 03:40:08] -rw-r--r-- 1 boinc boinc    585013 M&#195;&#164;r 17 13:21 pilot3.tar.gz
[2026-04-05 03:40:08] -rwx------ 1 boinc boinc     36322 M&#195;&#164;r 17 13:22 runpilot2-wrapper.sh
[2026-04-05 03:40:08] -rw-r--r-- 1 boinc boinc      5111 M&#195;&#164;r 17 13:24 queuedata.json
[2026-04-05 03:40:08] -rw-r--r-- 1 boinc boinc       100 Apr  5 00:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-05 03:40:08] -rwxr-xr-x 1 boinc boinc      7986 Apr  5 00:38 run_atlas
[2026-04-05 03:40:08] -rw-r--r-- 1 boinc boinc       105 Apr  5 00:38 job.xml
[2026-04-05 03:40:08] -rw-r--r-- 2 boinc boinc 218301411 Apr  5 00:38 EVNT.49134792._000001.pool.root.1
[2026-04-05 03:40:08] drwxrwx--x 2 boinc boinc      4096 Apr  5 00:38 shared
[2026-04-05 03:40:08] -rw-r--r-- 2 boinc boinc    597543 Apr  5 00:38 input.tar.gz
[2026-04-05 03:40:08] -rw-r--r-- 2 boinc boinc     15845 Apr  5 00:38 start_atlas.sh
[2026-04-05 03:40:08] -rw-r--r-- 1 boinc boinc         0 Apr  5 00:38 boinc_setup_complete
[2026-04-05 03:40:08] -rw-r--r-- 1 boinc boinc      8871 Apr  5 00:38 init_data.xml
[2026-04-05 03:40:08] -rw-r--r-- 1 boinc boinc         0 Apr  5 00:38 boinc_lockfile
[2026-04-05 03:40:08] -rw-r--r-- 1 boinc boinc      2617 Apr  5 00:38 pandaJob.out
[2026-04-05 03:40:08] -rw------- 1 boinc boinc   1005080 Apr  5 00:38 agis_schedconf.cvmfs.json
[2026-04-05 03:40:08] -rw------- 1 boinc boinc       420 Apr  5 00:38 workernode_map.json
[2026-04-05 03:40:08] drwx------ 5 boinc boinc      4096 Apr  5 00:38 pilot3
[2026-04-05 03:40:08] -rw------- 1 boinc boinc 196337371 Apr  5 03:39 HITS.49176670._000002.pool.root.1
[2026-04-05 03:40:08] -rw------- 1 boinc boinc        95 Apr  5 03:39 pilot_heartbeat.json
[2026-04-05 03:40:08] -rw-r--r-- 1 boinc boinc       530 Apr  5 03:39 boinc_task_state.xml
[2026-04-05 03:40:08] -rw------- 1 boinc boinc      1017 Apr  5 03:39 memory_monitor_summary.json
[2026-04-05 03:40:08] -rw------- 1 boinc boinc   1511579 Apr  5 03:39 agis_ddmendpoints.agis.ALL.json
[2026-04-05 03:40:08] -rw------- 1 boinc boinc    343987 Apr  5 03:39 log.49176670._000002.job.log.tgz.1
[2026-04-05 03:40:08] -rw------- 1 boinc boinc      6260 Apr  5 03:39 heartbeat.json
[2026-04-05 03:40:08] -rw-r--r-- 1 boinc boinc        28 Apr  5 03:39 wrapper_checkpoint.txt
[2026-04-05 03:40:08] -rw-r--r-- 1 boinc boinc      8192 Apr  5 03:39 boinc_mmap_file
[2026-04-05 03:40:08] -rw------- 1 boinc boinc       746 Apr  5 03:40 pilotlog.txt
[2026-04-05 03:40:08] -rw------- 1 boinc boinc   1569067 Apr  5 03:40 log.49176670._000002.job.log.1
[2026-04-05 03:40:08] -rw------- 1 boinc boinc       357 Apr  5 03:40 output.list
[2026-04-05 03:40:08] -rw-r--r-- 1 boinc boinc       620 Apr  5 03:40 runtime_log
[2026-04-05 03:40:08] -rw------- 1 boinc boinc   1935360 Apr  5 03:40 result.tar.gz
[2026-04-05 03:40:08] -rw-r--r-- 1 boinc boinc      8859 Apr  5 03:40 runtime_log.err
[2026-04-05 03:40:08] -rw------- 1 boinc boinc       639 Apr  5 03:40 3ZfKDmyciM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7C0LDmUhnCjn.diag
[2026-04-05 03:40:08] -rw-r--r-- 1 boinc boinc     21378 Apr  5 03:40 stderr.txt
[2026-04-05 03:40:08] HITS file was successfully produced:
[2026-04-05 03:40:08] -rw------- 1 boinc boinc 196337371 Apr  5 03:39 shared/HITS.pool.root.1
[2026-04-05 03:40:08]  *** Contents of shared directory: ***
[2026-04-05 03:40:08] insgesamt 407424
[2026-04-05 03:40:08] -rw-r--r-- 2 boinc boinc 218301411 Apr  5 00:38 ATLAS.root_0
[2026-04-05 03:40:08] -rw-r--r-- 2 boinc boinc    597543 Apr  5 00:38 input.tar.gz
[2026-04-05 03:40:08] -rw-r--r-- 2 boinc boinc     15845 Apr  5 00:38 start_atlas.sh
[2026-04-05 03:40:08] -rw------- 1 boinc boinc 196337371 Apr  5 03:39 HITS.pool.root.1
[2026-04-05 03:40:08] -rw------- 1 boinc boinc   1935360 Apr  5 03:40 result.tar.gz
03:40:09 (716899): run_atlas exited; CPU time 42436.956935
03:40:09 (716899): called boinc_finish(0)

</stderr_txt>
]]>

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