Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:37:02 (11379): wrapper (7.7.26015): starting
14:37:02 (11379): wrapper: running run_atlas (--nthreads 12)
[2026-04-02 14:37:02] Arguments: --nthreads 12
[2026-04-02 14:37:02] Threads: 12
[2026-04-02 14:37:02] Checking for CVMFS
[2026-04-02 14:37:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-02 14:37:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-02 14:37:03] Running cvmfs_config stat atlas.cern.ch
[2026-04-02 14:37:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-02 14:37:03] 2.11.2.0 2937 470930 101480 158012 1 1 10392256 20275200 1 130560 1 201299033 99.954 26941655 17599 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-02 14:37:03] CVMFS is ok
[2026-04-02 14:37:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-02 14:37:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-02 14:37:03] Further information can be found at the LHC@home message board.
[2026-04-02 14:37:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-02 14:37:03] Checking for apptainer binary...
[2026-04-02 14:37:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-02 14:37:03] Running /usr/bin/apptainer --version
[2026-04-02 14:37:03] apptainer version 1.3.2-1.el7
[2026-04-02 14:37:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-02 14:37:04] c-205-8.aglt2.org
[2026-04-02 14:37:04] apptainer works
[2026-04-02 14:37:04] Set ATHENA_PROC_NUMBER=12
[2026-04-02 14:37:04] Set ATHENA_CORE_NUMBER=12
[2026-04-02 14:37:04] Starting ATLAS job with PandaID=7060123789
[2026-04-02 14:37:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-02 15:47:39]  *** The last 200 lines of the pilot log: ***
[2026-04-02 15:47:39]  filetype=log
[2026-04-02 15:47:39]  guid=f04d9133-77f2-4f53-947a-7515acedb95d
[2026-04-02 15:47:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-02 15:47:39]  is_altstaged=None
[2026-04-02 15:47:39]  is_tar=False
[2026-04-02 15:47:39]  lfn=log.48955015._026432.job.log.tgz.1
[2026-04-02 15:47:39]  mtime=0
[2026-04-02 15:47:39]  protocol_id=None
[2026-04-02 15:47:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-02 15:47:39]  replicas=None
[2026-04-02 15:47:39]  scope=mc23_13p6TeV
[2026-04-02 15:47:39]  status=None
[2026-04-02 15:47:39]  status_code=0
[2026-04-02 15:47:39]  storage_token=
[2026-04-02 15:47:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7060123789/log.48955015._026432.job.log.tgz.1
[2026-04-02 15:47:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/3e/log.48955015._026432.job.log.tgz.1
[2026-04-02 15:47:39]  workdir=None
[2026-04-02 15:47:39] ]
[2026-04-02 15:47:39] 2026-04-02 19:46:54,209 | INFO     | transferring file log.48955015._026432.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7060123789/log.48955015._026432.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-04-02 15:47:39] 2026-04-02 19:46:54,209 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7060123789/log.48955015._026432.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955015._026432.job
[2026-04-02 15:47:39] 2026-04-02 19:46:54,232 | INFO     | adding to output.list: log.48955015._026432.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/3e/log.48955015._026432.job.log.tg
[2026-04-02 15:47:39] 2026-04-02 19:46:54,233 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-02 15:47:39] 2026-04-02 19:46:54,233 | INFO     | summary of transferred files:
[2026-04-02 15:47:39] 2026-04-02 19:46:54,233 | INFO     |  -- lfn=log.48955015._026432.job.log.tgz.1, status_code=0, status=transferred
[2026-04-02 15:47:39] 2026-04-02 19:46:54,233 | INFO     | stage-out finished correctly
[2026-04-02 15:47:39] 2026-04-02 19:46:54,407 | WARNING  | process 19499 can no longer be monitored (due to stat problems) - aborting
[2026-04-02 15:47:39] 2026-04-02 19:46:54,407 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7060123789/memory_monitor_summary.json (trf name=prmon)
[2026-04-02 15:47:39] 2026-04-02 19:46:54,510 | INFO     | number of running child processes to parent process 19499: 1
[2026-04-02 15:47:39] 2026-04-02 19:46:54,510 | INFO     | maximum number of monitored processes: 6
[2026-04-02 15:47:39] 2026-04-02 19:46:55,066 | INFO     | time since job start (4169s) is within the limit (345600.0s)
[2026-04-02 15:47:39] 2026-04-02 19:46:55,726 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-02 15:47:39] 2026-04-02 19:46:56,059 | INFO     | job 7060123789 has state=finished
[2026-04-02 15:47:39] 2026-04-02 19:46:56,059 | INFO     | preparing for final server update for job 7060123789 in state='finished'
[2026-04-02 15:47:39] 2026-04-02 19:46:56,060 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7060123789/jobReport.json
[2026-04-02 15:47:39] 2026-04-02 19:46:56,062 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-02 15:47:39] 2026-04-02 19:46:56,063 | INFO     | this job has now completed (state=finished)
[2026-04-02 15:47:39] 2026-04-02 19:46:56,063 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-02 15:47:39] 2026-04-02 19:46:56,063 | INFO     | log transfer has been attempted: DONE
[2026-04-02 15:47:39] 2026-04-02 19:46:56,063 | INFO     | job 7060123789 has finished - writing final server update
[2026-04-02 15:47:39] 2026-04-02 19:46:56,064 | INFO     | total number of processed events: 400 (read)
[2026-04-02 15:47:39] 2026-04-02 19:46:56,066 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7060123789/memory_monitor_summary.json (trf name=prmon)
[2026-04-02 15:47:39] 2026-04-02 19:46:56,067 | INFO     | extracted standard info from prmon json
[2026-04-02 15:47:39] 2026-04-02 19:46:56,067 | INFO     | extracted standard memory fields from prmon json
[2026-04-02 15:47:39] 2026-04-02 19:46:56,068 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-02 15:47:39] 2026-04-02 19:46:56,068 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-02 15:47:39] 2026-04-02 19:46:56,068 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-02 15:47:39] 2026-04-02 19:46:56,069 | INFO     | fitting pss+swap vs Time
[2026-04-02 15:47:39] 2026-04-02 19:46:56,070 | INFO     | sum of square deviations: 70364110.0
[2026-04-02 15:47:39] 2026-04-02 19:46:56,070 | INFO     | sum of deviations: -6264199800.000004
[2026-04-02 15:47:39] 2026-04-02 19:46:56,070 | INFO     | mean x: 1775157212.0
[2026-04-02 15:47:39] 2026-04-02 19:46:56,070 | INFO     | mean y: 2803921.3278688523
[2026-04-02 15:47:39] 2026-04-02 19:46:56,070 | INFO     | intersect: 158037055365.40875
[2026-04-02 15:47:39] 2026-04-02 19:46:56,070 | INFO     | chi2: 0.08986075309969305
[2026-04-02 15:47:39] 2026-04-02 19:46:56,071 | INFO     | current memory leak: -89.03 B/s (using 61 data points, chi2=0.09)
[2026-04-02 15:47:39] 2026-04-02 19:46:56,071 | INFO     | could have reported an average CPU frequency of 1751 MHz (6 samples)
[2026-04-02 15:47:39] 2026-04-02 19:46:56,071 | INFO     | ..............................
[2026-04-02 15:47:39] 2026-04-02 19:46:56,071 | INFO     | . Timing measurements:
[2026-04-02 15:47:39] 2026-04-02 19:46:56,071 | INFO     | . get job = 0 s
[2026-04-02 15:47:39] 2026-04-02 19:46:56,071 | INFO     | . initial setup = 7 s
[2026-04-02 15:47:39] 2026-04-02 19:46:56,071 | INFO     | . payload setup = 14 s
[2026-04-02 15:47:39] 2026-04-02 19:46:56,071 | INFO     | . stage-in = 0 s
[2026-04-02 15:47:39] 2026-04-02 19:46:56,072 | INFO     | . payload execution = 4136 s
[2026-04-02 15:47:39] 2026-04-02 19:46:56,072 | INFO     | . stage-out = 0 s
[2026-04-02 15:47:39] 2026-04-02 19:46:56,072 | INFO     | . log creation = 0 s
[2026-04-02 15:47:39] 2026-04-02 19:46:56,072 | INFO     | ..............................
[2026-04-02 15:47:39] 2026-04-02 19:46:56,150 | INFO     | 
[2026-04-02 15:47:39] 2026-04-02 19:46:56,151 | INFO     | job summary report
[2026-04-02 15:47:39] 2026-04-02 19:46:56,151 | INFO     | --------------------------------------------------
[2026-04-02 15:47:39] 2026-04-02 19:46:56,151 | INFO     | PanDA job id: 7060123789
[2026-04-02 15:47:39] 2026-04-02 19:46:56,151 | INFO     | task id: 48955015
[2026-04-02 15:47:39] 2026-04-02 19:46:56,152 | INFO     | errors: (none)
[2026-04-02 15:47:39] 2026-04-02 19:46:56,152 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-02 15:47:39] 2026-04-02 19:46:56,152 | INFO     | pilot state: finished 
[2026-04-02 15:47:39] 2026-04-02 19:46:56,152 | INFO     | transexitcode: 0
[2026-04-02 15:47:39] 2026-04-02 19:46:56,152 | INFO     | exeerrorcode: 0
[2026-04-02 15:47:39] 2026-04-02 19:46:56,153 | INFO     | exeerrordiag: 
[2026-04-02 15:47:39] 2026-04-02 19:46:56,153 | INFO     | exitcode: 0
[2026-04-02 15:47:39] 2026-04-02 19:46:56,154 | INFO     | exitmsg: OK
[2026-04-02 15:47:39] 2026-04-02 19:46:56,154 | INFO     | cpuconsumptiontime: 43528 s
[2026-04-02 15:47:39] 2026-04-02 19:46:56,154 | INFO     | nevents: 400
[2026-04-02 15:47:39] 2026-04-02 19:46:56,154 | INFO     | neventsw: 0
[2026-04-02 15:47:39] 2026-04-02 19:46:56,155 | INFO     | pid: 19499
[2026-04-02 15:47:39] 2026-04-02 19:46:56,155 | INFO     | pgrp: 19499
[2026-04-02 15:47:39] 2026-04-02 19:46:56,155 | INFO     | corecount: 12
[2026-04-02 15:47:39] 2026-04-02 19:46:56,156 | INFO     | event service: False
[2026-04-02 15:47:39] 2026-04-02 19:46:56,156 | INFO     | sizes: {0: 2279980, 1: 2280186, 11: 2280214, 4155: 2306178, 4156: 2315176, 4158: 2315554}
[2026-04-02 15:47:39] 2026-04-02 19:46:56,156 | INFO     | --------------------------------------------------
[2026-04-02 15:47:39] 2026-04-02 19:46:56,156 | INFO     | 
[2026-04-02 15:47:39] 2026-04-02 19:46:56,156 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-02 15:47:39] 2026-04-02 19:46:56,184 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,184 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,184 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,185 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,185 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,185 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,185 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,186 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,186 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,186 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,187 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-02 15:47:39] 2026-04-02 19:46:56,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,188 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-02 15:47:39] 2026-04-02 19:46:56,188 | INFO     | job 7060123789 has completed (purged errors)
[2026-04-02 15:47:39] 2026-04-02 19:46:56,188 | INFO     | overall cleanup function is called
[2026-04-02 15:47:39] 2026-04-02 19:46:56,280 | INFO     | PID=15102 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-02 15:47:39] 2026-04-02 19:46:57,197 | INFO     | --- collectZombieJob: --- 10, [19499]
[2026-04-02 15:47:39] 2026-04-02 19:46:57,197 | INFO     | zombie collector waiting for pid 19499
[2026-04-02 15:47:39] 2026-04-02 19:46:57,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-02 15:47:39] 2026-04-02 19:46:57,197 | INFO     | collected zombie processes
[2026-04-02 15:47:39] 2026-04-02 19:46:57,197 | INFO     | will attempt to kill all subprocesses of pid=19499
[2026-04-02 15:47:39] 2026-04-02 19:46:57,286 | INFO     | process IDs to be killed: [19499] (in reverse order)
[2026-04-02 15:47:39] 2026-04-02 19:46:57,339 | WARNING  | found no corresponding commands to process id(s)
[2026-04-02 15:47:39] 2026-04-02 19:46:57,339 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-02 15:47:39] 2026-04-02 19:46:57,341 | INFO     | did not find any defunct processes belonging to 19499
[2026-04-02 15:47:39] 2026-04-02 19:46:57,343 | INFO     | did not find any defunct processes belonging to 19499
[2026-04-02 15:47:39] 2026-04-02 19:46:57,344 | INFO     | ready for new job
[2026-04-02 15:47:39] 2026-04-02 19:46:57,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-02 15:47:39] 2026-04-02 19:46:57,345 | INFO     | **************************************
[2026-04-02 15:47:39] 2026-04-02 19:46:57,345 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-02 15:47:39] 2026-04-02 19:46:57,345 | INFO     | **************************************
[2026-04-02 15:47:39] 2026-04-02 19:46:57,345 | INFO     | 
[2026-04-02 15:47:39] 2026-04-02 19:46:57,346 | INFO     | architecture information:
[2026-04-02 15:47:39] 2026-04-02 19:46:57,346 | INFO     | executing command: cat /etc/os-release
[2026-04-02 15:47:39] 2026-04-02 19:46:57,362 | INFO     | cat /etc/os-release:
[2026-04-02 15:47:39] NAME="CentOS Linux"
[2026-04-02 15:47:39] VERSION="7 (Core)"
[2026-04-02 15:47:39] ID="centos"
[2026-04-02 15:47:39] ID_LIKE="rhel fedora"
[2026-04-02 15:47:39] VERSION_ID="7"
[2026-04-02 15:47:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-02 15:47:39] ANSI_COLOR="0;31"
[2026-04-02 15:47:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-02 15:47:39] HOME_URL="https://www.centos.org/"
[2026-04-02 15:47:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-02 15:47:39] 
[2026-04-02 15:47:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-02 15:47:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-02 15:47:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-02 15:47:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-02 15:47:39] 
[2026-04-02 15:47:39] 2026-04-02 19:46:57,362 | INFO     | **************************************
[2026-04-02 15:47:39] 2026-04-02 19:46:57,865 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-02 15:47:39] 2026-04-02 19:46:57,882 | INFO     | sufficient remaining disk space (28896657408 B)
[2026-04-02 15:47:39] 2026-04-02 19:46:57,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-02 15:47:39] 2026-04-02 19:46:57,882 | INFO     | current server update state: UPDATING_FINAL
[2026-04-02 15:47:39] 2026-04-02 19:46:57,883 | INFO     | update_server=False
[2026-04-02 15:47:39] 2026-04-02 19:46:57,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-02 15:47:39] 2026-04-02 19:46:57,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-02 15:47:39] 2026-04-02 19:46:57,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-02 15:47:39] 2026-04-02 19:46:57,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-02 15:47:39] 2026-04-02 19:46:57,913 | INFO     | all payload control threads have been joined
[2026-04-02 15:47:39] 2026-04-02 19:46:58,019 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-02 15:47:39] 2026-04-02 19:46:58,019 | INFO     | aborting loop
[2026-04-02 15:47:39] 2026-04-02 19:46:58,790 | INFO     | all data control threads have been joined
[2026-04-02 15:47:39] 2026-04-02 19:46:58,888 | INFO     | [job] retrieve thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:46:58,890 | INFO     | [job] queue monitor thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:46:58,919 | INFO     | [payload] control thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:46:59,024 | INFO     | [job] job monitor thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:46:59,036 | INFO     | all job control threads have been joined
[2026-04-02 15:47:39] 2026-04-02 19:46:59,518 | INFO     | [payload] failed_post thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:46:59,612 | INFO     | [payload] execute_payloads thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:46:59,665 | INFO     | [job] validate thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:46:59,795 | INFO     | [data] control thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:46:59,888 | INFO     | [data] copytool_out thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:47:00,010 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:47:00,022 | INFO     | [job] create_data_payload thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:47:00,041 | INFO     | [job] control thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:47:00,055 | INFO     | [payload] validate_pre thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:47:00,132 | INFO     | [payload] validate_post thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:47:00,254 | INFO     | [data] copytool_in thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:47:01,890 | INFO     | [data] queue_monitor thread has finished
[2026-04-02 15:47:39] 2026-04-02 19:47:28,479 | INFO     | PID=15102 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-02 15:47:39] 2026-04-02 19:47:28,480 | INFO     | found 0 job(s) in 20 queues
[2026-04-02 15:47:39] 2026-04-02 19:47:28,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-02 15:47:39] 2026-04-02 19:47:28,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-02 15:47:39] 2026-04-02 19:47:32,716 | INFO     | [monitor] cgroup control has ended
[2026-04-02 15:47:39] 2026-04-02 19:47:33,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626145924928)>', '<ExcThread(monitor, started 140624879679232)>']
[2026-04-02 15:47:39] 2026-04-02 19:47:34,511 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-02 15:47:39] 2026-04-02 19:47:34,511 | INFO     | [monitor] control thread has ended
[2026-04-02 15:47:39] 2026-04-02 19:47:38,747 | INFO     | all workflow threads have been joined
[2026-04-02 15:47:39] 2026-04-02 19:47:38,753 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-02 15:47:39] 2026-04-02 19:47:38,753 | INFO     | traces error code: 0
[2026-04-02 15:47:39] 2026-04-02 19:47:38,754 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-02 15:47:39] 2026-04-02 19:47:38,845 [wrapper] ==== pilot stdout END ====
[2026-04-02 15:47:39] 2026-04-02 19:47:38,849 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-02 15:47:39] 2026-04-02 19:47:38,853 [wrapper] pilotpid: 15102
[2026-04-02 15:47:39] 2026-04-02 19:47:38,856 [wrapper] Pilot exit status: 0
[2026-04-02 15:47:39] 2026-04-02 19:47:38,871 [wrapper] pandaids: 7060123789
[2026-04-02 15:47:39] 2026-04-02 19:47:38,908 [wrapper] cleanup supervisor_pilot  5847 15103
[2026-04-02 15:47:39] 2026-04-02 19:47:38,911 [wrapper] Test setup, not cleaning
[2026-04-02 15:47:39] 2026-04-02 19:47:38,915 [wrapper] apfmon messages muted
[2026-04-02 15:47:39] 2026-04-02 19:47:38,918 [wrapper] ==== wrapper stdout END ====
[2026-04-02 15:47:39] 2026-04-02 19:47:38,922 [wrapper] ==== wrapper stderr END ====
[2026-04-02 15:47:39]  *** Error codes and diagnostics ***
[2026-04-02 15:47:39]     "exeErrorCode": 0,
[2026-04-02 15:47:39]     "exeErrorDiag": "",
[2026-04-02 15:47:39]     "pilotErrorCode": 0,
[2026-04-02 15:47:39]     "pilotErrorDiag": "",
[2026-04-02 15:47:39]  *** Listing of results directory ***
[2026-04-02 15:47:39] total 619156
[2026-04-02 15:47:39] -rwx------ 1 boincer umatlas     36322 Mar 25 07:53 runpilot2-wrapper.sh
[2026-04-02 15:47:39] -rw-r--r-- 1 boincer umatlas      5111 Mar 25 07:54 queuedata.json
[2026-04-02 15:47:39] -rw-r--r-- 1 boincer umatlas    585013 Mar 25 07:57 pilot3.tar.gz
[2026-04-02 15:47:39] -rw-r--r-- 1 boincer umatlas       100 Apr  2 14:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-02 15:47:39] -rwxr-xr-x 1 boincer umatlas      7986 Apr  2 14:37 run_atlas
[2026-04-02 15:47:39] -rw-r--r-- 1 boincer umatlas       105 Apr  2 14:37 job.xml
[2026-04-02 15:47:39] -rw-r--r-- 2 boincer umatlas 437034064 Apr  2 14:37 EVNT.46701403._002536.pool.root.1
[2026-04-02 15:47:39] -rw-r--r-- 2 boincer umatlas     15845 Apr  2 14:37 start_atlas.sh
[2026-04-02 15:47:39] drwxrwx--x 2 boincer umatlas      4096 Apr  2 14:37 shared
[2026-04-02 15:47:39] -rw-r--r-- 2 boincer umatlas    597548 Apr  2 14:37 input.tar.gz
[2026-04-02 15:47:39] -rw-r--r-- 1 boincer umatlas         0 Apr  2 14:37 boinc_lockfile
[2026-04-02 15:47:39] -rw-r--r-- 1 boincer umatlas      2571 Apr  2 14:37 pandaJob.out
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas        57 Apr  2 14:37 setup.sh.local
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas   1005191 Apr  2 14:37 agis_schedconf.cvmfs.json
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas   1511579 Apr  2 14:37 agis_ddmendpoints.agis.ALL.json
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas       433 Apr  2 14:37 workernode_map.json
[2026-04-02 15:47:39] drwx------ 5 boincer umatlas      4096 Apr  2 14:37 pilot3
[2026-04-02 15:47:39] -rw-r--r-- 1 boincer umatlas      5952 Apr  2 15:36 init_data.xml
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas 191079671 Apr  2 15:46 HITS.48955015._026432.pool.root.1
[2026-04-02 15:47:39] -rw-r--r-- 1 boincer umatlas       530 Apr  2 15:46 boinc_task_state.xml
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas      1061 Apr  2 15:46 memory_monitor_summary.json
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas    369352 Apr  2 15:46 log.48955015._026432.job.log.tgz.1
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas      6424 Apr  2 15:46 heartbeat.json
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas        95 Apr  2 15:47 pilot_heartbeat.json
[2026-04-02 15:47:39] -rw-r--r-- 1 boincer umatlas      8192 Apr  2 15:47 boinc_mmap_file
[2026-04-02 15:47:39] -rw-r--r-- 1 boincer umatlas        27 Apr  2 15:47 wrapper_checkpoint.txt
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas      4742 Apr  2 15:47 pilotlog.txt
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas    611093 Apr  2 15:47 log.48955015._026432.job.log.1
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas       357 Apr  2 15:47 output.list
[2026-04-02 15:47:39] -rw-r--r-- 1 boincer umatlas       620 Apr  2 15:47 runtime_log
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas    993280 Apr  2 15:47 result.tar.gz
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas       658 Apr  2 15:47 SEfKDmFzbP9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBPCMDmElnoLm.diag
[2026-04-02 15:47:39] -rw-r--r-- 1 boincer umatlas      9338 Apr  2 15:47 runtime_log.err
[2026-04-02 15:47:39] -rw-r--r-- 1 boincer umatlas     21413 Apr  2 15:47 stderr.txt
[2026-04-02 15:47:39] HITS file was successfully produced:
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas 191079671 Apr  2 15:46 shared/HITS.pool.root.1
[2026-04-02 15:47:39]  *** Contents of shared directory: ***
[2026-04-02 15:47:39] total 614976
[2026-04-02 15:47:39] -rw-r--r-- 2 boincer umatlas 437034064 Apr  2 14:37 ATLAS.root_0
[2026-04-02 15:47:39] -rw-r--r-- 2 boincer umatlas     15845 Apr  2 14:37 start_atlas.sh
[2026-04-02 15:47:39] -rw-r--r-- 2 boincer umatlas    597548 Apr  2 14:37 input.tar.gz
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas 191079671 Apr  2 15:46 HITS.pool.root.1
[2026-04-02 15:47:39] -rw------- 1 boincer umatlas    993280 Apr  2 15:47 result.tar.gz
15:47:40 (11379): run_atlas exited; CPU time 43489.964670
15:47:40 (11379): called boinc_finish(0)

</stderr_txt>
]]>

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