Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:01:40 (2749307): wrapper (7.7.26015): starting
12:01:40 (2749307): wrapper: running run_atlas (--nthreads 12)
[2026-04-02 12:01:40] Arguments: --nthreads 12
[2026-04-02 12:01:40] Threads: 12
[2026-04-02 12:01:40] Checking for CVMFS
[2026-04-02 12:01:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-02 12:01:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-02 12:01:41] Running cvmfs_config stat atlas.cern.ch
[2026-04-02 12:01:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-02 12:01:41] 2.13.3.0 9714 213098 527900 158006 0 335 13881187 21042177 19426 16776704 0 877320559 99.443 1206030776 32863 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-02 12:01:41] CVMFS is ok
[2026-04-02 12:01:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-02 12:01:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-02 12:01:41] Further information can be found at the LHC@home message board.
[2026-04-02 12:01:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-02 12:01:41] Checking for apptainer binary...
[2026-04-02 12:01:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-02 12:01:41] Running /usr/bin/apptainer --version
[2026-04-02 12:01:41] apptainer version 1.4.5-2.el9
[2026-04-02 12:01:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-02 12:01:41] c-6-1.aglt2.org
[2026-04-02 12:01:41] apptainer works
[2026-04-02 12:01:41] Set ATHENA_PROC_NUMBER=12
[2026-04-02 12:01:41] Set ATHENA_CORE_NUMBER=12
[2026-04-02 12:01:41] Starting ATLAS job with PandaID=7063894918
[2026-04-02 12:01:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-02 17:26:45]  *** The last 200 lines of the pilot log: ***
[2026-04-02 17:26:45] 2026-04-02 21:25:48,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-02 17:26:45] 2026-04-02 21:25:48,248 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-02 17:26:45] 2026-04-02 21:25:48,248 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-02 17:26:45] 2026-04-02 21:25:48,258 | INFO     | fitting pss+swap vs Time
[2026-04-02 17:26:45] 2026-04-02 21:25:48,259 | INFO     | sum of square deviations: 9970493272.996786
[2026-04-02 17:26:45] 2026-04-02 21:25:48,266 | INFO     | sum of deviations: 47383775896.36164
[2026-04-02 17:26:45] 2026-04-02 21:25:48,266 | INFO     | mean x: 1775155423.0031447
[2026-04-02 17:26:45] 2026-04-02 21:25:48,267 | INFO     | mean y: 2709141.6383647798
[2026-04-02 17:26:45] 2026-04-02 21:25:48,267 | INFO     | intersect: -8433540143.299011
[2026-04-02 17:26:45] 2026-04-02 21:25:48,271 | INFO     | chi2: 1.5305893540700648
[2026-04-02 17:26:45] 2026-04-02 21:25:48,272 | INFO     | sum of square deviations: 9507547344.210846
[2026-04-02 17:26:45] 2026-04-02 21:25:48,275 | INFO     | sum of deviations: 45945374417.06071
[2026-04-02 17:26:45] 2026-04-02 21:25:48,275 | INFO     | mean x: 1775155270.511182
[2026-04-02 17:26:45] 2026-04-02 21:25:48,280 | INFO     | mean y: 2708670.268370607
[2026-04-02 17:26:45] 2026-04-02 21:25:48,280 | INFO     | intersect: -8575757531.29275
[2026-04-02 17:26:45] 2026-04-02 21:25:48,280 | INFO     | chi2: 1.530567502396024
[2026-04-02 17:26:45] 2026-04-02 21:25:48,281 | INFO     | current chi2=1.530567502396024 (change=0.0014276640552078176 %)
[2026-04-02 17:26:45] 2026-04-02 21:25:48,281 | INFO     | right removable region: 312
[2026-04-02 17:26:45] 2026-04-02 21:25:48,281 | INFO     | sum of square deviations: 9507449744.210842
[2026-04-02 17:26:45] 2026-04-02 21:25:48,288 | INFO     | sum of deviations: -4624009543.763578
[2026-04-02 17:26:45] 2026-04-02 21:25:48,288 | INFO     | mean x: 1775155575.511182
[2026-04-02 17:26:45] 2026-04-02 21:25:48,288 | INFO     | mean y: 2726142.3610223643
[2026-04-02 17:26:45] 2026-04-02 21:25:48,288 | INFO     | intersect: 866084513.2876688
[2026-04-02 17:26:45] 2026-04-02 21:25:48,289 | INFO     | chi2: 0.08619097934314124
[2026-04-02 17:26:45] 2026-04-02 21:25:48,289 | INFO     | current chi2=0.08619097934314124 (change=94.36877179931072 %)
[2026-04-02 17:26:45] 2026-04-02 21:25:48,294 | INFO     | sum of square deviations: 9058983598.918827
[2026-04-02 17:26:45] 2026-04-02 21:25:48,297 | INFO     | sum of deviations: 5300450329.415585
[2026-04-02 17:26:45] 2026-04-02 21:25:48,297 | INFO     | mean x: 1775155728.0162337
[2026-04-02 17:26:45] 2026-04-02 21:25:48,297 | INFO     | mean y: 2722747.116883117
[2026-04-02 17:26:45] 2026-04-02 21:25:48,297 | INFO     | intersect: -1035928516.6353295
[2026-04-02 17:26:45] 2026-04-02 21:25:48,298 | INFO     | chi2: 0.03864293816178319
[2026-04-02 17:26:45] 2026-04-02 21:25:48,298 | INFO     | current chi2=0.03864293816178319 (change=55.165913583672186 %)
[2026-04-02 17:26:45] 2026-04-02 21:25:48,303 | INFO     | sum of square deviations: 8624862335.650166
[2026-04-02 17:26:45] 2026-04-02 21:25:48,305 | INFO     | sum of deviations: 9935597521.102308
[2026-04-02 17:26:45] 2026-04-02 21:25:48,306 | INFO     | mean x: 1775155880.5181518
[2026-04-02 17:26:45] 2026-04-02 21:25:48,306 | INFO     | mean y: 2721144.2541254126
[2026-04-02 17:26:45] 2026-04-02 21:25:48,306 | INFO     | intersect: -2042208233.1278489
[2026-04-02 17:26:45] 2026-04-02 21:25:48,311 | INFO     | chi2: 0.0043931852952926445
[2026-04-02 17:26:45] 2026-04-02 21:25:48,311 | INFO     | current chi2=0.0043931852952926445 (change=88.63133730437355 %)
[2026-04-02 17:26:45] 2026-04-02 21:25:48,311 | INFO     | sum of square deviations: 8204833993.879196
[2026-04-02 17:26:45] 2026-04-02 21:25:48,314 | INFO     | sum of deviations: 7728007768.067117
[2026-04-02 17:26:45] 2026-04-02 21:25:48,319 | INFO     | mean x: 1775156033.0201342
[2026-04-02 17:26:45] 2026-04-02 21:25:48,319 | INFO     | mean y: 2721945.322147651
[2026-04-02 17:26:45] 2026-04-02 21:25:48,319 | INFO     | intersect: -1669270397.5996888
[2026-04-02 17:26:45] 2026-04-02 21:25:48,319 | INFO     | chi2: 0.003371498239972919
[2026-04-02 17:26:45] 2026-04-02 21:25:48,320 | INFO     | current chi2=0.003371498239972919 (change=23.256179438060048 %)
[2026-04-02 17:26:45] 2026-04-02 21:25:48,320 | INFO     | left removable region: 40
[2026-04-02 17:26:45] 2026-04-02 21:25:48,320 | INFO     | sum of square deviations: 6239169871.985272
[2026-04-02 17:26:45] 2026-04-02 21:25:48,326 | INFO     | sum of deviations: 3254897597.1029434
[2026-04-02 17:26:45] 2026-04-02 21:25:48,327 | INFO     | mean x: 1775156459.9926472
[2026-04-02 17:26:45] 2026-04-02 21:25:48,327 | INFO     | mean y: 2723037.0514705884
[2026-04-02 17:26:45] 2026-04-02 21:25:48,327 | INFO     | intersect: -923354087.7364973
[2026-04-02 17:26:45] 2026-04-02 21:25:48,327 | INFO     | chi2: 0.001830059228100411
[2026-04-02 17:26:45] 2026-04-02 21:25:48,328 | INFO     | current memory leak: 0.52 B/s (using 272 data points, chi2=0.00)
[2026-04-02 17:26:45] 2026-04-02 21:25:48,328 | INFO     | could have reported an average CPU frequency of 2599 MHz (14 samples)
[2026-04-02 17:26:45] 2026-04-02 21:25:48,329 | INFO     | ..............................
[2026-04-02 17:26:45] 2026-04-02 21:25:48,329 | INFO     | . Timing measurements:
[2026-04-02 17:26:45] 2026-04-02 21:25:48,329 | INFO     | . get job = 0 s
[2026-04-02 17:26:45] 2026-04-02 21:25:48,329 | INFO     | . initial setup = 8 s
[2026-04-02 17:26:45] 2026-04-02 21:25:48,329 | INFO     | . payload setup = 16 s
[2026-04-02 17:26:45] 2026-04-02 21:25:48,329 | INFO     | . stage-in = 0 s
[2026-04-02 17:26:45] 2026-04-02 21:25:48,329 | INFO     | . payload execution = 19389 s
[2026-04-02 17:26:45] 2026-04-02 21:25:48,329 | INFO     | . stage-out = 5 s
[2026-04-02 17:26:45] 2026-04-02 21:25:48,329 | INFO     | . log creation = 0 s
[2026-04-02 17:26:45] 2026-04-02 21:25:48,329 | INFO     | ..............................
[2026-04-02 17:26:45] 2026-04-02 21:25:48,470 | INFO     | 
[2026-04-02 17:26:45] 2026-04-02 21:25:48,470 | INFO     | job summary report
[2026-04-02 17:26:45] 2026-04-02 21:25:48,471 | INFO     | --------------------------------------------------
[2026-04-02 17:26:45] 2026-04-02 21:25:48,471 | INFO     | PanDA job id: 7063894918
[2026-04-02 17:26:45] 2026-04-02 21:25:48,471 | INFO     | task id: 48967085
[2026-04-02 17:26:45] 2026-04-02 21:25:48,471 | INFO     | errors: (none)
[2026-04-02 17:26:45] 2026-04-02 21:25:48,471 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-02 17:26:45] 2026-04-02 21:25:48,471 | INFO     | pilot state: finished 
[2026-04-02 17:26:45] 2026-04-02 21:25:48,471 | INFO     | transexitcode: 0
[2026-04-02 17:26:45] 2026-04-02 21:25:48,471 | INFO     | exeerrorcode: 0
[2026-04-02 17:26:45] 2026-04-02 21:25:48,471 | INFO     | exeerrordiag: 
[2026-04-02 17:26:45] 2026-04-02 21:25:48,472 | INFO     | exitcode: 0
[2026-04-02 17:26:45] 2026-04-02 21:25:48,472 | INFO     | exitmsg: OK
[2026-04-02 17:26:45] 2026-04-02 21:25:48,472 | INFO     | cpuconsumptiontime: 61474 s
[2026-04-02 17:26:45] 2026-04-02 21:25:48,472 | INFO     | nevents: 400
[2026-04-02 17:26:45] 2026-04-02 21:25:48,472 | INFO     | neventsw: 0
[2026-04-02 17:26:45] 2026-04-02 21:25:48,472 | INFO     | pid: 2758915
[2026-04-02 17:26:45] 2026-04-02 21:25:48,472 | INFO     | pgrp: 2758915
[2026-04-02 17:26:45] 2026-04-02 21:25:48,472 | INFO     | corecount: 12
[2026-04-02 17:26:45] 2026-04-02 21:25:48,472 | INFO     | event service: False
[2026-04-02 17:26:45] 2026-04-02 21:25:48,472 | INFO     | sizes: {0: 2279705, 1: 2280222, 12: 2280222, 19408: 2313202, 19415: 2322394}
[2026-04-02 17:26:45] 2026-04-02 21:25:48,472 | INFO     | --------------------------------------------------
[2026-04-02 17:26:45] 2026-04-02 21:25:48,473 | INFO     | 
[2026-04-02 17:26:45] 2026-04-02 21:25:48,473 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-02 17:26:45] 2026-04-02 21:25:48,498 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,498 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,498 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,499 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,500 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-02 17:26:45] 2026-04-02 21:25:48,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,501 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-02 17:26:45] 2026-04-02 21:25:48,506 | INFO     | job 7063894918 has completed (purged errors)
[2026-04-02 17:26:45] 2026-04-02 21:25:48,507 | INFO     | overall cleanup function is called
[2026-04-02 17:26:45] 2026-04-02 21:25:49,531 | INFO     | --- collectZombieJob: --- 10, [2758915]
[2026-04-02 17:26:45] 2026-04-02 21:25:49,532 | INFO     | zombie collector waiting for pid 2758915
[2026-04-02 17:26:45] 2026-04-02 21:25:49,532 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-02 17:26:45] 2026-04-02 21:25:49,532 | INFO     | collected zombie processes
[2026-04-02 17:26:45] 2026-04-02 21:25:49,532 | INFO     | will attempt to kill all subprocesses of pid=2758915
[2026-04-02 17:26:45] 2026-04-02 21:25:49,925 | INFO     | process IDs to be killed: [2758915] (in reverse order)
[2026-04-02 17:26:45] 2026-04-02 21:25:50,034 | WARNING  | found no corresponding commands to process id(s)
[2026-04-02 17:26:45] 2026-04-02 21:25:50,034 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-02 17:26:45] 2026-04-02 21:25:50,048 | INFO     | did not find any defunct processes belonging to 2758915
[2026-04-02 17:26:45] 2026-04-02 21:25:50,061 | INFO     | did not find any defunct processes belonging to 2758915
[2026-04-02 17:26:45] 2026-04-02 21:25:50,061 | INFO     | ready for new job
[2026-04-02 17:26:45] 2026-04-02 21:25:50,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-02 17:26:45] 2026-04-02 21:25:50,064 | INFO     | **************************************
[2026-04-02 17:26:45] 2026-04-02 21:25:50,064 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-02 17:26:45] 2026-04-02 21:25:50,065 | INFO     | **************************************
[2026-04-02 17:26:45] 2026-04-02 21:25:50,065 | INFO     | 
[2026-04-02 17:26:45] 2026-04-02 21:25:50,067 | INFO     | architecture information:
[2026-04-02 17:26:45] 2026-04-02 21:25:50,067 | INFO     | executing command: cat /etc/os-release
[2026-04-02 17:26:45] 2026-04-02 21:25:50,112 | INFO     | cat /etc/os-release:
[2026-04-02 17:26:45] NAME="CentOS Linux"
[2026-04-02 17:26:45] VERSION="7 (Core)"
[2026-04-02 17:26:45] ID="centos"
[2026-04-02 17:26:45] ID_LIKE="rhel fedora"
[2026-04-02 17:26:45] VERSION_ID="7"
[2026-04-02 17:26:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-02 17:26:45] ANSI_COLOR="0;31"
[2026-04-02 17:26:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-02 17:26:45] HOME_URL="https://www.centos.org/"
[2026-04-02 17:26:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-02 17:26:45] 
[2026-04-02 17:26:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-02 17:26:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-02 17:26:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-02 17:26:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-02 17:26:45] 
[2026-04-02 17:26:45] 2026-04-02 21:25:50,112 | INFO     | **************************************
[2026-04-02 17:26:45] 2026-04-02 21:25:50,615 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-02 17:26:45] 2026-04-02 21:25:50,681 | INFO     | sufficient remaining disk space (52819918848 B)
[2026-04-02 17:26:45] 2026-04-02 21:25:50,681 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-02 17:26:45] 2026-04-02 21:25:50,682 | INFO     | current server update state: UPDATING_FINAL
[2026-04-02 17:26:45] 2026-04-02 21:25:50,682 | INFO     | update_server=False
[2026-04-02 17:26:45] 2026-04-02 21:25:50,682 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-02 17:26:45] 2026-04-02 21:25:50,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-02 17:26:45] 2026-04-02 21:25:50,682 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-02 17:26:45] 2026-04-02 21:25:50,682 | INFO     | aborting loop
[2026-04-02 17:26:45] 2026-04-02 21:25:50,737 | INFO     | all data control threads have been joined
[2026-04-02 17:26:45] 2026-04-02 21:25:51,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-02 17:26:45] 2026-04-02 21:25:51,688 | INFO     | [job] retrieve thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:51,695 | INFO     | [job] job monitor thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:51,738 | INFO     | [data] copytool_in thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:51,743 | INFO     | [data] control thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:51,745 | INFO     | [payload] validate_pre thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:51,839 | INFO     | all job control threads have been joined
[2026-04-02 17:26:45] 2026-04-02 21:25:51,964 | INFO     | all payload control threads have been joined
[2026-04-02 17:26:45] 2026-04-02 21:25:52,023 | INFO     | [job] create_data_payload thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:52,075 | INFO     | [payload] failed_post thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:52,105 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:52,367 | INFO     | [payload] validate_post thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:52,648 | INFO     | [job] validate thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:52,846 | INFO     | [job] control thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:52,972 | INFO     | [payload] control thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:53,083 | INFO     | [payload] execute_payloads thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:53,090 | INFO     | [data] copytool_out thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:53,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-02 17:26:45] 2026-04-02 21:25:54,490 | INFO     | [job] queue monitor thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:25:54,709 | INFO     | [data] queue_monitor thread has finished
[2026-04-02 17:26:45] 2026-04-02 21:26:21,230 | INFO     | PID=2753750 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-02 17:26:45] 2026-04-02 21:26:21,231 | INFO     | .. there are 21 such processes running
[2026-04-02 17:26:45] 2026-04-02 21:26:21,231 | INFO     | found 0 job(s) in 20 queues
[2026-04-02 17:26:45] 2026-04-02 21:26:21,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-02 17:26:45] 2026-04-02 21:26:21,231 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-02 17:26:45] 2026-04-02 21:26:37,706 | INFO     | [monitor] cgroup control has ended
[2026-04-02 17:26:45] 2026-04-02 21:26:39,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139657475573568)>', '<ExcThread(monitor, started 139656742029056)>']
[2026-04-02 17:26:45] 2026-04-02 21:26:40,354 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-02 17:26:45] 2026-04-02 21:26:40,355 | INFO     | [monitor] control thread has ended
[2026-04-02 17:26:45] 2026-04-02 21:26:44,373 | INFO     | all workflow threads have been joined
[2026-04-02 17:26:45] 2026-04-02 21:26:44,374 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-02 17:26:45] 2026-04-02 21:26:44,374 | INFO     | traces error code: 0
[2026-04-02 17:26:45] 2026-04-02 21:26:44,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-02 17:26:45] 2026-04-02 21:26:45,110 [wrapper] ==== pilot stdout END ====
[2026-04-02 17:26:45] 2026-04-02 21:26:45,113 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-02 17:26:45] 2026-04-02 21:26:45,116 [wrapper] pilotpid: 2753750
[2026-04-02 17:26:45] 2026-04-02 21:26:45,118 [wrapper] Pilot exit status: 0
[2026-04-02 17:26:45] 2026-04-02 21:26:45,133 [wrapper] pandaids: 7063894918
[2026-04-02 17:26:45] 2026-04-02 21:26:45,211 [wrapper] cleanup supervisor_pilot 3900883 2753751
[2026-04-02 17:26:45] 2026-04-02 21:26:45,214 [wrapper] Test setup, not cleaning
[2026-04-02 17:26:45] 2026-04-02 21:26:45,218 [wrapper] apfmon messages muted
[2026-04-02 17:26:45] 2026-04-02 21:26:45,221 [wrapper] ==== wrapper stdout END ====
[2026-04-02 17:26:45] 2026-04-02 21:26:45,224 [wrapper] ==== wrapper stderr END ====
[2026-04-02 17:26:45]  *** Error codes and diagnostics ***
[2026-04-02 17:26:45]     "exeErrorCode": 0,
[2026-04-02 17:26:45]     "exeErrorDiag": "",
[2026-04-02 17:26:45]     "pilotErrorCode": 0,
[2026-04-02 17:26:45]     "pilotErrorDiag": "",
[2026-04-02 17:26:45]  *** Listing of results directory ***
[2026-04-02 17:26:45] total 417128
[2026-04-02 17:26:45] -rw-r--r--. 1 boincer umatlas    585013 Mar 27 22:21 pilot3.tar.gz
[2026-04-02 17:26:45] -rwx------. 1 boincer umatlas     36322 Mar 27 22:25 runpilot2-wrapper.sh
[2026-04-02 17:26:45] -rw-r--r--. 1 boincer umatlas      5118 Mar 27 22:26 queuedata.json
[2026-04-02 17:26:45] -rw-r--r--. 1 boincer umatlas       100 Apr  2 12:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-02 17:26:45] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  2 12:01 run_atlas
[2026-04-02 17:26:45] -rw-r--r--. 1 boincer umatlas       105 Apr  2 12:01 job.xml
[2026-04-02 17:26:45] -rw-r--r--. 2 boincer umatlas 215881758 Apr  2 12:01 EVNT.48967083._000969.pool.root.1
[2026-04-02 17:26:45] -rw-r--r--. 2 boincer umatlas    597532 Apr  2 12:01 input.tar.gz
[2026-04-02 17:26:45] -rw-r--r--. 2 boincer umatlas     15845 Apr  2 12:01 start_atlas.sh
[2026-04-02 17:26:45] drwxrwx--x. 2 boincer umatlas      4096 Apr  2 12:01 shared
[2026-04-02 17:26:45] -rw-r--r--. 1 boincer umatlas         0 Apr  2 12:01 boinc_lockfile
[2026-04-02 17:26:45] -rw-r--r--. 1 boincer umatlas      2565 Apr  2 12:01 pandaJob.out
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas        57 Apr  2 12:01 setup.sh.local
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas   1005159 Apr  2 12:01 agis_schedconf.cvmfs.json
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas       438 Apr  2 12:01 workernode_map.json
[2026-04-02 17:26:45] drwx------. 5 boincer umatlas      4096 Apr  2 12:02 pilot3
[2026-04-02 17:26:45] -rw-r--r--. 1 boincer umatlas      6657 Apr  2 17:22 init_data.xml
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas 201386199 Apr  2 17:24 HITS.48967085._027973.pool.root.1
[2026-04-02 17:26:45] -rw-r--r--. 1 boincer umatlas       530 Apr  2 17:24 boinc_task_state.xml
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas      1043 Apr  2 17:25 memory_monitor_summary.json
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas   1511579 Apr  2 17:25 agis_ddmendpoints.agis.ALL.json
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas    591207 Apr  2 17:25 log.48967085._027973.job.log.tgz.1
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas      6386 Apr  2 17:25 heartbeat.json
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas        95 Apr  2 17:25 pilot_heartbeat.json
[2026-04-02 17:26:45] -rw-r--r--. 1 boincer umatlas      8192 Apr  2 17:26 boinc_mmap_file
[2026-04-02 17:26:45] -rw-r--r--. 1 boincer umatlas        28 Apr  2 17:26 wrapper_checkpoint.txt
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas      4820 Apr  2 17:26 pilotlog.txt
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas   2372848 Apr  2 17:26 log.48967085._027973.job.log.1
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas       357 Apr  2 17:26 output.list
[2026-04-02 17:26:45] -rw-r--r--. 1 boincer umatlas       620 Apr  2 17:26 runtime_log
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas   2979840 Apr  2 17:26 result.tar.gz
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas       654 Apr  2 17:26 TtALDmBYYQ9nsSi4ap6QjLDmwznN0nGgGQJmrXlLDmsPGKDm7r98xn.diag
[2026-04-02 17:26:45] -rw-r--r--. 1 boincer umatlas      9329 Apr  2 17:26 runtime_log.err
[2026-04-02 17:26:45] -rw-r--r--. 1 boincer umatlas     20977 Apr  2 17:26 stderr.txt
[2026-04-02 17:26:45] HITS file was successfully produced:
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas 201386199 Apr  2 17:24 shared/HITS.pool.root.1
[2026-04-02 17:26:45]  *** Contents of shared directory: ***
[2026-04-02 17:26:45] total 411012
[2026-04-02 17:26:45] -rw-r--r--. 2 boincer umatlas 215881758 Apr  2 12:01 ATLAS.root_0
[2026-04-02 17:26:45] -rw-r--r--. 2 boincer umatlas    597532 Apr  2 12:01 input.tar.gz
[2026-04-02 17:26:45] -rw-r--r--. 2 boincer umatlas     15845 Apr  2 12:01 start_atlas.sh
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas 201386199 Apr  2 17:24 HITS.pool.root.1
[2026-04-02 17:26:45] -rw-------. 1 boincer umatlas   2979840 Apr  2 17:26 result.tar.gz
17:26:47 (2749307): run_atlas exited; CPU time 62232.549819
17:26:47 (2749307): called boinc_finish(0)

</stderr_txt>
]]>

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