Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
05:34:53 (3386839): wrapper (7.7.26015): starting
05:34:53 (3386839): wrapper: running run_atlas (--nthreads 4)
[2026-04-01 05:34:54] Arguments: --nthreads 4
[2026-04-01 05:34:54] Threads: 4
[2026-04-01 05:34:54] Checking for CVMFS
[2026-04-01 05:34:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-01 05:34:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-01 05:34:54] Running cvmfs_config stat atlas.cern.ch
[2026-04-01 05:34:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-01 05:34:54] 2.13.3.0 809741 8566 57388 157950 1 58 2111682 4096000 1795 130560 0 7788324 99.991 313957 711 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-04-01 05:34:54] CVMFS is ok
[2026-04-01 05:34:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-01 05:34:54] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-01 05:34:54] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-01 05:34:54] Further information can be found at the LHC@home message board.
[2026-04-01 05:34:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-01 05:34:54] Checking for apptainer binary...
[2026-04-01 05:34:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-01 05:34:54] Running /usr/bin/apptainer --version
[2026-04-01 05:34:54] apptainer version 1.4.5
[2026-04-01 05:34:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-01 05:34:54] T3500-Ubuntu
[2026-04-01 05:34:54] apptainer works
[2026-04-01 05:34:54] Set ATHENA_PROC_NUMBER=4
[2026-04-01 05:34:54] Set ATHENA_CORE_NUMBER=4
[2026-04-01 05:34:54] Starting ATLAS job with PandaID=7060535227
[2026-04-01 05:34:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-01 09:52:57]  *** The last 200 lines of the pilot log: ***
[2026-04-01 09:52:57] 2026-04-01 13:52:25,504 | INFO     | total number of processed events: 400 (read)
[2026-04-01 09:52:57] 2026-04-01 13:52:25,511 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/12/PanDA_Pilot-7060535227/memory_monitor_summary.json (trf name=prmon)
[2026-04-01 09:52:57] 2026-04-01 13:52:25,512 | INFO     | extracted standard info from prmon json
[2026-04-01 09:52:57] 2026-04-01 13:52:25,512 | INFO     | extracted standard memory fields from prmon json
[2026-04-01 09:52:57] 2026-04-01 13:52:25,512 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-04-01 09:52:57] 2026-04-01 13:52:25,512 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-01 09:52:57] 2026-04-01 13:52:25,512 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-01 09:52:57] 2026-04-01 13:52:25,517 | INFO     | fitting pss+swap vs Time
[2026-04-01 09:52:57] 2026-04-01 13:52:25,517 | INFO     | sum of square deviations: 5021496942.0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,519 | INFO     | sum of deviations: -26406469950.0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,519 | INFO     | mean x: 1775043822.0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,520 | INFO     | mean y: 2348040.4387351777
[2026-04-01 09:52:57] 2026-04-01 13:52:25,520 | INFO     | intersect: 9336744115.348494
[2026-04-01 09:52:57] 2026-04-01 13:52:25,520 | INFO     | chi2: 2.260103424514789
[2026-04-01 09:52:57] 2026-04-01 13:52:25,520 | INFO     | sum of square deviations: 4729621702.0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,522 | INFO     | sum of deviations: -9673440695.000008
[2026-04-01 09:52:57] 2026-04-01 13:52:25,522 | INFO     | mean x: 1775043669.5
[2026-04-01 09:52:57] 2026-04-01 13:52:25,523 | INFO     | mean y: 2356649.1532258065
[2026-04-01 09:52:57] 2026-04-01 13:52:25,523 | INFO     | intersect: 3632832985.2801704
[2026-04-01 09:52:57] 2026-04-01 13:52:25,523 | INFO     | chi2: 1.4520496684106892
[2026-04-01 09:52:57] 2026-04-01 13:52:25,523 | INFO     | current chi2=1.4520496684106892 (change=35.75295481345404 %)
[2026-04-01 09:52:57] 2026-04-01 13:52:25,524 | INFO     | sum of square deviations: 4449281562.0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,525 | INFO     | sum of deviations: -9230883072.0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,525 | INFO     | mean x: 1775043517.0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,526 | INFO     | mean y: 2356889.9135802467
[2026-04-01 09:52:57] 2026-04-01 13:52:25,526 | INFO     | intersect: 3685023164.1903
[2026-04-01 09:52:57] 2026-04-01 13:52:25,526 | INFO     | chi2: 1.4518674962602542
[2026-04-01 09:52:57] 2026-04-01 13:52:25,526 | INFO     | current chi2=1.4518674962602542 (change=0.01254586219728389 %)
[2026-04-01 09:52:57] 2026-04-01 13:52:25,526 | INFO     | right removable region: 242
[2026-04-01 09:52:57] 2026-04-01 13:52:25,527 | INFO     | sum of square deviations: 4729621702.0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,528 | INFO     | sum of deviations: -56169771120.0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,528 | INFO     | mean x: 1775043974.5
[2026-04-01 09:52:57] 2026-04-01 13:52:25,529 | INFO     | mean y: 2363407.693548387
[2026-04-01 09:52:57] 2026-04-01 13:52:25,529 | INFO     | intersect: 21083079806.943554
[2026-04-01 09:52:57] 2026-04-01 13:52:25,529 | INFO     | chi2: 0.9602479878332066
[2026-04-01 09:52:57] 2026-04-01 13:52:25,529 | INFO     | current chi2=0.9602479878332066 (change=57.51309531158479 %)
[2026-04-01 09:52:57] 2026-04-01 13:52:25,530 | INFO     | sum of square deviations: 4449281562.0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,531 | INFO     | sum of deviations: -51311473822.0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,531 | INFO     | mean x: 1775044127.0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,531 | INFO     | mean y: 2360762.304526749
[2026-04-01 09:52:57] 2026-04-01 13:52:25,532 | INFO     | intersect: 20473110699.40535
[2026-04-01 09:52:57] 2026-04-01 13:52:25,532 | INFO     | chi2: 0.9575567430215758
[2026-04-01 09:52:57] 2026-04-01 13:52:25,532 | INFO     | current chi2=0.9575567430215758 (change=0.2802656028161675 %)
[2026-04-01 09:52:57] 2026-04-01 13:52:25,532 | INFO     | left removable region: 20
[2026-04-01 09:52:57] 2026-04-01 13:52:25,533 | INFO     | sum of square deviations: 3392567795.5
[2026-04-01 09:52:57] 2026-04-01 13:52:25,534 | INFO     | sum of deviations: -22684392720.5
[2026-04-01 09:52:57] 2026-04-01 13:52:25,534 | INFO     | mean x: 1775044096.5
[2026-04-01 09:52:57] 2026-04-01 13:52:25,534 | INFO     | mean y: 2363642.1396396398
[2026-04-01 09:52:57] 2026-04-01 13:52:25,534 | INFO     | intersect: 11871189796.364418
[2026-04-01 09:52:57] 2026-04-01 13:52:25,535 | INFO     | chi2: 0.11091096497247221
[2026-04-01 09:52:57] 2026-04-01 13:52:25,535 | INFO     | current memory leak: -6.69 B/s (using 222 data points, chi2=0.11)
[2026-04-01 09:52:57] 2026-04-01 13:52:25,535 | INFO     | could have reported an average CPU frequency of 3198 MHz (12 samples)
[2026-04-01 09:52:57] 2026-04-01 13:52:25,536 | INFO     | ..............................
[2026-04-01 09:52:57] 2026-04-01 13:52:25,536 | INFO     | . Timing measurements:
[2026-04-01 09:52:57] 2026-04-01 13:52:25,536 | INFO     | . get job = 0 s
[2026-04-01 09:52:57] 2026-04-01 13:52:25,536 | INFO     | . initial setup = 7 s
[2026-04-01 09:52:57] 2026-04-01 13:52:25,536 | INFO     | . payload setup = 9 s
[2026-04-01 09:52:57] 2026-04-01 13:52:25,536 | INFO     | . stage-in = 0 s
[2026-04-01 09:52:57] 2026-04-01 13:52:25,536 | INFO     | . payload execution = 15402 s
[2026-04-01 09:52:57] 2026-04-01 13:52:25,536 | INFO     | . stage-out = 4 s
[2026-04-01 09:52:57] 2026-04-01 13:52:25,536 | INFO     | . log creation = 0 s
[2026-04-01 09:52:57] 2026-04-01 13:52:25,536 | INFO     | ..............................
[2026-04-01 09:52:57] 2026-04-01 13:52:25,888 | INFO     | 
[2026-04-01 09:52:57] 2026-04-01 13:52:25,888 | INFO     | job summary report
[2026-04-01 09:52:57] 2026-04-01 13:52:25,888 | INFO     | --------------------------------------------------
[2026-04-01 09:52:57] 2026-04-01 13:52:25,888 | INFO     | PanDA job id: 7060535227
[2026-04-01 09:52:57] 2026-04-01 13:52:25,888 | INFO     | task id: 49192408
[2026-04-01 09:52:57] 2026-04-01 13:52:25,889 | INFO     | errors: (none)
[2026-04-01 09:52:57] 2026-04-01 13:52:25,889 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-01 09:52:57] 2026-04-01 13:52:25,889 | INFO     | pilot state: finished 
[2026-04-01 09:52:57] 2026-04-01 13:52:25,889 | INFO     | transexitcode: 0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,889 | INFO     | exeerrorcode: 0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,889 | INFO     | exeerrordiag: 
[2026-04-01 09:52:57] 2026-04-01 13:52:25,889 | INFO     | exitcode: 0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,889 | INFO     | exitmsg: OK
[2026-04-01 09:52:57] 2026-04-01 13:52:25,889 | INFO     | cpuconsumptiontime: 60616 s
[2026-04-01 09:52:57] 2026-04-01 13:52:25,889 | INFO     | nevents: 400
[2026-04-01 09:52:57] 2026-04-01 13:52:25,889 | INFO     | neventsw: 0
[2026-04-01 09:52:57] 2026-04-01 13:52:25,890 | INFO     | pid: 3404908
[2026-04-01 09:52:57] 2026-04-01 13:52:25,890 | INFO     | pgrp: 3404908
[2026-04-01 09:52:57] 2026-04-01 13:52:25,890 | INFO     | corecount: 4
[2026-04-01 09:52:57] 2026-04-01 13:52:25,890 | INFO     | event service: False
[2026-04-01 09:52:57] 2026-04-01 13:52:25,890 | INFO     | sizes: {0: 2279985, 1: 2280247, 11: 2280275, 15416: 2311450, 15420: 2320478, 15423: 2320534, 15424: 2320856}
[2026-04-01 09:52:57] 2026-04-01 13:52:25,890 | INFO     | --------------------------------------------------
[2026-04-01 09:52:57] 2026-04-01 13:52:25,890 | INFO     | 
[2026-04-01 09:52:57] 2026-04-01 13:52:25,890 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/12
[2026-04-01 09:52:57] 2026-04-01 13:52:25,915 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,915 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,915 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,915 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,915 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,915 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,916 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,916 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,916 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,916 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,916 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,916 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,916 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,916 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,917 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,917 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,917 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-01 09:52:57] 2026-04-01 13:52:25,917 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,917 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-01 09:52:57] 2026-04-01 13:52:25,917 | INFO     | job 7060535227 has completed (purged errors)
[2026-04-01 09:52:57] 2026-04-01 13:52:25,917 | INFO     | overall cleanup function is called
[2026-04-01 09:52:57] 2026-04-01 13:52:26,926 | INFO     | --- collectZombieJob: --- 10, [3404908]
[2026-04-01 09:52:57] 2026-04-01 13:52:26,926 | INFO     | zombie collector waiting for pid 3404908
[2026-04-01 09:52:57] 2026-04-01 13:52:26,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-01 09:52:57] 2026-04-01 13:52:26,926 | INFO     | collected zombie processes
[2026-04-01 09:52:57] 2026-04-01 13:52:26,927 | INFO     | will attempt to kill all subprocesses of pid=3404908
[2026-04-01 09:52:57] 2026-04-01 13:52:27,167 | INFO     | process IDs to be killed: [3404908] (in reverse order)
[2026-04-01 09:52:57] 2026-04-01 13:52:27,243 | WARNING  | found no corresponding commands to process id(s)
[2026-04-01 09:52:57] 2026-04-01 13:52:27,244 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-01 09:52:57] 2026-04-01 13:52:27,249 | INFO     | did not find any defunct processes belonging to 3404908
[2026-04-01 09:52:57] 2026-04-01 13:52:27,255 | INFO     | did not find any defunct processes belonging to 3404908
[2026-04-01 09:52:57] 2026-04-01 13:52:27,256 | INFO     | ready for new job
[2026-04-01 09:52:57] 2026-04-01 13:52:27,256 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-04-01 09:52:57] 2026-04-01 13:52:27,258 | INFO     | **************************************
[2026-04-01 09:52:57] 2026-04-01 13:52:27,258 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-04-01 09:52:57] 2026-04-01 13:52:27,258 | INFO     | **************************************
[2026-04-01 09:52:57] 2026-04-01 13:52:27,259 | INFO     | 
[2026-04-01 09:52:57] 2026-04-01 13:52:27,261 | INFO     | architecture information:
[2026-04-01 09:52:57] 2026-04-01 13:52:27,261 | INFO     | executing command: cat /etc/os-release
[2026-04-01 09:52:57] 2026-04-01 13:52:27,281 | INFO     | cat /etc/os-release:
[2026-04-01 09:52:57] NAME="CentOS Linux"
[2026-04-01 09:52:57] VERSION="7 (Core)"
[2026-04-01 09:52:57] ID="centos"
[2026-04-01 09:52:57] ID_LIKE="rhel fedora"
[2026-04-01 09:52:57] VERSION_ID="7"
[2026-04-01 09:52:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-01 09:52:57] ANSI_COLOR="0;31"
[2026-04-01 09:52:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-01 09:52:57] HOME_URL="https://www.centos.org/"
[2026-04-01 09:52:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-01 09:52:57] 
[2026-04-01 09:52:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-01 09:52:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-01 09:52:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-01 09:52:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-01 09:52:57] 
[2026-04-01 09:52:57] 2026-04-01 13:52:27,282 | INFO     | **************************************
[2026-04-01 09:52:57] 2026-04-01 13:52:27,784 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/12
[2026-04-01 09:52:57] 2026-04-01 13:52:27,805 | INFO     | sufficient remaining disk space (405687762944 B)
[2026-04-01 09:52:57] 2026-04-01 13:52:27,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-01 09:52:57] 2026-04-01 13:52:27,806 | INFO     | current server update state: UPDATING_FINAL
[2026-04-01 09:52:57] 2026-04-01 13:52:27,806 | INFO     | update_server=False
[2026-04-01 09:52:57] 2026-04-01 13:52:27,806 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-04-01 09:52:57] 2026-04-01 13:52:27,806 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-01 09:52:57] 2026-04-01 13:52:27,823 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-01 09:52:57] 2026-04-01 13:52:27,823 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-01 09:52:57] 2026-04-01 13:52:27,823 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-01 09:52:57] 2026-04-01 13:52:27,823 | INFO     | will abort loop
[2026-04-01 09:52:57] 2026-04-01 13:52:28,019 | INFO     | all job control threads have been joined
[2026-04-01 09:52:57] 2026-04-01 13:52:28,520 | INFO     | all data control threads have been joined
[2026-04-01 09:52:57] 2026-04-01 13:52:28,811 | INFO     | [job] retrieve thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:28,829 | INFO     | [job] job monitor thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:28,935 | INFO     | [data] copytool_in thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:29,024 | INFO     | [job] control thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:29,137 | INFO     | all payload control threads have been joined
[2026-04-01 09:52:57] 2026-04-01 13:52:29,209 | INFO     | [payload] execute_payloads thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:29,525 | INFO     | [data] control thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:29,812 | INFO     | [data] copytool_out thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:29,916 | INFO     | [job] validate thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:30,013 | INFO     | [payload] validate_post thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:30,143 | INFO     | [payload] control thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:30,158 | INFO     | [job] create_data_payload thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:30,210 | INFO     | [payload] validate_pre thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:30,404 | INFO     | [payload] failed_post thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:30,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-01 09:52:57] 2026-04-01 13:52:31,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-01 09:52:57] 2026-04-01 13:52:31,644 | INFO     | [job] queue monitor thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:35,067 | INFO     | [data] queue_monitor thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:35,090 | INFO     | [monitor] cgroup control has ended
[2026-04-01 09:52:57] 2026-04-01 13:52:38,211 | INFO     | job.realtimelogging is not enabled
[2026-04-01 09:52:57] 2026-04-01 13:52:39,216 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-01 09:52:57] 2026-04-01 13:52:41,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127075225347904)>', '<ExcThread(monitor, started 127074417223424)>']
[2026-04-01 09:52:57] 2026-04-01 13:52:46,206 | INFO     | all workflow threads have been joined
[2026-04-01 09:52:57] 2026-04-01 13:52:46,207 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-01 09:52:57] 2026-04-01 13:52:46,207 | INFO     | traces error code: 0
[2026-04-01 09:52:57] 2026-04-01 13:52:46,208 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-01 09:52:57] 2026-04-01 13:52:57,436 | INFO     | PID=3393388 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-01 09:52:57] 2026-04-01 13:52:57,436 | INFO     | .. there are 4 such processes running
[2026-04-01 09:52:57] 2026-04-01 13:52:57,437 | INFO     | found 0 job(s) in 20 queues
[2026-04-01 09:52:57] 2026-04-01 13:52:57,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-01 09:52:57] 2026-04-01 13:52:57,437 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-01 09:52:57] 2026-04-01 13:52:57,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-01 09:52:57] 2026-04-01 13:52:57,437 | INFO     | [monitor] control thread has ended
[2026-04-01 09:52:57] 2026-04-01 13:52:57,570 [wrapper] ==== pilot stdout END ====
[2026-04-01 09:52:57] 2026-04-01 13:52:57,574 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-01 09:52:57] 2026-04-01 13:52:57,578 [wrapper] pilotpid: 3393388
[2026-04-01 09:52:57] 2026-04-01 13:52:57,581 [wrapper] Pilot exit status: 0
[2026-04-01 09:52:57] 2026-04-01 13:52:57,593 [wrapper] pandaids: 7060535227
[2026-04-01 09:52:57] 2026-04-01 13:52:57,635 [wrapper] cleanup supervisor_pilot 3447735 3393389
[2026-04-01 09:52:57] 2026-04-01 13:52:57,639 [wrapper] Test setup, not cleaning
[2026-04-01 09:52:57] 2026-04-01 13:52:57,643 [wrapper] apfmon messages muted
[2026-04-01 09:52:57] 2026-04-01 13:52:57,647 [wrapper] ==== wrapper stdout END ====
[2026-04-01 09:52:57] 2026-04-01 13:52:57,651 [wrapper] ==== wrapper stderr END ====
[2026-04-01 09:52:57]  *** Error codes and diagnostics ***
[2026-04-01 09:52:57]     "exeErrorCode": 0,
[2026-04-01 09:52:57]     "exeErrorDiag": "",
[2026-04-01 09:52:57]     "pilotErrorCode": 0,
[2026-04-01 09:52:57]     "pilotErrorDiag": "",
[2026-04-01 09:52:57]  *** Listing of results directory ***
[2026-04-01 09:52:57] total 484840
[2026-04-01 09:52:57] -rwx------ 1 whitlerd whitlerd     36322 Mar 22 00:32 runpilot2-wrapper.sh
[2026-04-01 09:52:57] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 23 17:53 pilot3.tar.gz
[2026-04-01 09:52:57] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 23 17:53 queuedata.json
[2026-04-01 09:52:57] -rw-rw-r-- 1 whitlerd whitlerd       100 Apr  1 05:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-01 09:52:57] -rwxr-xr-x 1 whitlerd whitlerd      7986 Apr  1 05:34 run_atlas
[2026-04-01 09:52:57] -rw-rw-r-- 1 whitlerd whitlerd       105 Apr  1 05:34 job.xml
[2026-04-01 09:52:57] -rw-r--r-- 2 whitlerd whitlerd 256464720 Apr  1 05:34 EVNT.49131628._000001.pool.root.1
[2026-04-01 09:52:57] -rw-r--r-- 2 whitlerd whitlerd    597551 Apr  1 05:34 input.tar.gz
[2026-04-01 09:52:57] -rw-r--r-- 2 whitlerd whitlerd     15845 Apr  1 05:34 start_atlas.sh
[2026-04-01 09:52:57] drwxrwx--x 2 whitlerd whitlerd      4096 Apr  1 05:34 shared
[2026-04-01 09:52:57] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr  1 05:34 boinc_setup_complete
[2026-04-01 09:52:57] -rw-rw-r-- 1 whitlerd whitlerd      9207 Apr  1 05:34 init_data.xml
[2026-04-01 09:52:57] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr  1 05:34 boinc_lockfile
[2026-04-01 09:52:57] -rw-rw-r-- 1 whitlerd whitlerd      2600 Apr  1 05:34 pandaJob.out
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd   1004639 Apr  1 05:35 agis_schedconf.cvmfs.json
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd       437 Apr  1 05:35 workernode_map.json
[2026-04-01 09:52:57] drwx------ 5 whitlerd whitlerd      4096 Apr  1 05:35 pilot3
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd 230821501 Apr  1 09:51 HITS.49192408._000033.pool.root.1
[2026-04-01 09:52:57] -rw-rw-r-- 1 whitlerd whitlerd       530 Apr  1 09:52 boinc_task_state.xml
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd      1040 Apr  1 09:52 memory_monitor_summary.json
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd   1511579 Apr  1 09:52 agis_ddmendpoints.agis.ALL.json
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd    418087 Apr  1 09:52 log.49192408._000033.job.log.tgz.1
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd      6330 Apr  1 09:52 heartbeat.json
[2026-04-01 09:52:57] -rw-rw-r-- 1 whitlerd whitlerd      8192 Apr  1 09:52 boinc_mmap_file
[2026-04-01 09:52:57] -rw-rw-r-- 1 whitlerd whitlerd        28 Apr  1 09:52 wrapper_checkpoint.txt
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd        95 Apr  1 09:52 pilot_heartbeat.json
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd       822 Apr  1 09:52 pilotlog.txt
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd   2208739 Apr  1 09:52 log.49192408._000033.job.log.1
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd       357 Apr  1 09:52 output.list
[2026-04-01 09:52:57] -rw-rw-r-- 1 whitlerd whitlerd       620 Apr  1 09:52 runtime_log
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd   2641920 Apr  1 09:52 result.tar.gz
[2026-04-01 09:52:57] -rw-rw-r-- 1 whitlerd whitlerd      9036 Apr  1 09:52 runtime_log.err
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd       654 Apr  1 09:52 AZyKDmZfPO9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtO1LDmWJU5Pm.diag
[2026-04-01 09:52:57] -rw-rw-r-- 1 whitlerd whitlerd     21137 Apr  1 09:52 stderr.txt
[2026-04-01 09:52:57] HITS file was successfully produced:
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd 230821501 Apr  1 09:51 shared/HITS.pool.root.1
[2026-04-01 09:52:57]  *** Contents of shared directory: ***
[2026-04-01 09:52:57] total 479056
[2026-04-01 09:52:57] -rw-r--r-- 2 whitlerd whitlerd 256464720 Apr  1 05:34 ATLAS.root_0
[2026-04-01 09:52:57] -rw-r--r-- 2 whitlerd whitlerd    597551 Apr  1 05:34 input.tar.gz
[2026-04-01 09:52:57] -rw-r--r-- 2 whitlerd whitlerd     15845 Apr  1 05:34 start_atlas.sh
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd 230821501 Apr  1 09:51 HITS.pool.root.1
[2026-04-01 09:52:57] -rw------- 1 whitlerd whitlerd   2641920 Apr  1 09:52 result.tar.gz
09:52:59 (3386839): run_atlas exited; CPU time 60957.287330
09:52:59 (3386839): called boinc_finish(0)

</stderr_txt>
]]>

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